View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21230_high_1 (Length: 658)

Name: NF21230_high_1
Description: NF21230
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21230_high_1
NF21230_high_1
[»] chr8 (31 HSPs)
chr8 (300-648)||(6975665-6976018)
chr8 (17-150)||(26771244-26771378)
chr8 (43-150)||(10758240-10758347)
chr8 (46-150)||(27028810-27028915)
chr8 (17-151)||(38648329-38648464)
chr8 (17-150)||(18133635-18133769)
chr8 (40-151)||(25930533-25930646)
chr8 (40-120)||(12976223-12976302)
chr8 (17-150)||(35534570-35534702)
chr8 (40-97)||(8146362-8146419)
chr8 (19-116)||(31716186-31716283)
chr8 (40-103)||(10120783-10120846)
chr8 (40-150)||(16825518-16825628)
chr8 (18-148)||(29168015-29168146)
chr8 (40-150)||(29205787-29205897)
chr8 (40-145)||(30251434-30251540)
chr8 (40-150)||(37945576-37945686)
chr8 (24-118)||(43045689-43045783)
chr8 (17-148)||(6881908-6882040)
chr8 (17-81)||(28763417-28763481)
chr8 (19-103)||(35643947-35644031)
chr8 (40-116)||(35749550-35749626)
chr8 (42-120)||(16347200-16347279)
chr8 (92-150)||(42043377-42043436)
chr8 (40-129)||(9956794-9956884)
chr8 (17-110)||(1058034-1058126)
chr8 (41-74)||(40859763-40859796)
chr8 (40-116)||(1930049-1930125)
chr8 (40-147)||(10114471-10114579)
chr8 (40-88)||(10383927-10383974)
chr8 (91-142)||(11861791-11861843)
[»] chr7 (38 HSPs)
chr7 (17-197)||(33601984-33602166)
chr7 (17-150)||(33601367-33601500)
chr7 (40-150)||(17944323-17944434)
chr7 (17-150)||(48470023-48470157)
chr7 (40-150)||(30570911-30571022)
chr7 (40-150)||(39967899-39968010)
chr7 (43-120)||(11619141-11619218)
chr7 (17-149)||(27863682-27863815)
chr7 (40-147)||(420342-420450)
chr7 (43-150)||(19302546-19302650)
chr7 (25-116)||(38499878-38499969)
chr7 (19-120)||(21568454-21568555)
chr7 (56-150)||(48507701-48507797)
chr7 (72-150)||(46280284-46280363)
chr7 (46-120)||(39629943-39630017)
chr7 (43-150)||(19022568-19022676)
chr7 (40-147)||(34744010-34744118)
chr7 (55-150)||(45338428-45338523)
chr7 (49-110)||(20428494-20428555)
chr7 (40-151)||(45593505-45593618)
chr7 (40-116)||(5947198-5947274)
chr7 (19-150)||(20526425-20526557)
chr7 (40-120)||(28614443-28614523)
chr7 (56-146)||(38138475-38138566)
chr7 (91-148)||(4970824-4970882)
chr7 (40-129)||(19214386-19214476)
chr7 (55-132)||(28341052-28341129)
chr7 (46-102)||(28900903-28900960)
chr7 (42-150)||(39279941-39280050)
chr7 (78-150)||(39907782-39907855)
chr7 (17-151)||(3308208-3308344)
chr7 (91-150)||(7467588-7467648)
chr7 (108-151)||(20234461-20234505)
chr7 (40-116)||(34035931-34036007)
chr7 (41-81)||(34464202-34464242)
chr7 (41-117)||(43250681-43250756)
chr7 (91-150)||(43694601-43694661)
chr7 (40-120)||(45790406-45790485)
[»] chr3 (35 HSPs)
chr3 (40-151)||(53789441-53789553)
chr3 (42-150)||(30443872-30443981)
chr3 (44-150)||(20880455-20880562)
chr3 (17-142)||(18405788-18405914)
chr3 (17-150)||(39980708-39980842)
chr3 (40-150)||(21367646-21367757)
chr3 (40-150)||(36631031-36631142)
chr3 (44-150)||(402526-402633)
chr3 (37-120)||(901934-902017)
chr3 (24-150)||(584025-584152)
chr3 (40-150)||(20170502-20170613)
chr3 (17-120)||(24085295-24085398)
chr3 (17-116)||(46031004-46031103)
chr3 (40-150)||(46778171-46778281)
chr3 (58-150)||(35959454-35959547)
chr3 (52-132)||(46478684-46478767)
chr3 (40-130)||(22203429-22203520)
chr3 (17-83)||(31365145-31365211)
chr3 (70-151)||(47132309-47132391)
chr3 (19-150)||(20257514-20257647)
chr3 (40-148)||(37689212-37689319)
chr3 (43-88)||(49556900-49556945)
chr3 (47-150)||(4401026-4401127)
chr3 (40-116)||(34610786-34610862)
chr3 (83-150)||(44061046-44061114)
chr3 (40-116)||(45541585-45541660)
chr3 (48-150)||(13715560-13715665)
chr3 (46-117)||(28795839-28795910)
chr3 (93-150)||(30956659-30956717)
chr3 (93-150)||(30972471-30972529)
chr3 (78-116)||(33883768-33883806)
chr3 (19-116)||(466207-466304)
chr3 (37-101)||(944591-944655)
chr3 (44-88)||(26911627-26911671)
chr3 (18-70)||(34034158-34034210)
[»] chr2 (37 HSPs)
chr2 (43-150)||(41851514-41851622)
chr2 (40-150)||(45229491-45229601)
chr2 (43-148)||(43279512-43279616)
chr2 (38-112)||(33981140-33981214)
chr2 (40-150)||(41812072-41812181)
chr2 (43-150)||(15757641-15757750)
chr2 (17-132)||(26202025-26202141)
chr2 (48-150)||(12464461-12464564)
chr2 (40-150)||(18066107-18066218)
chr2 (40-150)||(32592566-32592676)
chr2 (40-150)||(39659489-39659600)
chr2 (64-150)||(41241136-41241223)
chr2 (17-116)||(41293120-41293219)
chr2 (43-147)||(5745768-5745873)
chr2 (40-150)||(1625879-1625990)
chr2 (17-120)||(7035524-7035627)
chr2 (40-142)||(20952342-20952445)
chr2 (40-121)||(750679-750760)
chr2 (48-136)||(9174808-9174897)
chr2 (56-117)||(20926516-20926577)
chr2 (42-150)||(40279176-40279285)
chr2 (40-104)||(13325596-13325660)
chr2 (17-116)||(4606939-4607038)
chr2 (40-115)||(16451133-16451208)
chr2 (40-150)||(26626852-26626963)
chr2 (40-123)||(33192209-33192291)
chr2 (53-150)||(33319807-33319903)
chr2 (48-102)||(2227194-2227248)
chr2 (18-88)||(19608591-19608661)
chr2 (40-98)||(43570446-43570503)
chr2 (40-117)||(1647249-1647325)
chr2 (40-112)||(7928278-7928351)
chr2 (48-151)||(12289774-12289879)
chr2 (37-110)||(31561719-31561792)
chr2 (38-110)||(36043924-36043996)
chr2 (55-150)||(39073684-39073780)
chr2 (40-150)||(41407280-41407392)
[»] chr5 (31 HSPs)
chr5 (40-150)||(16937863-16937974)
chr5 (17-150)||(16457936-16458070)
chr5 (17-150)||(39105443-39105578)
chr5 (40-151)||(10639931-10640043)
chr5 (40-120)||(12857685-12857765)
chr5 (42-149)||(40426745-40426853)
chr5 (40-150)||(29925820-29925931)
chr5 (40-104)||(3735138-3735202)
chr5 (40-120)||(12857318-12857398)
chr5 (17-147)||(32009674-32009806)
chr5 (17-142)||(43300865-43300991)
chr5 (43-120)||(37954696-37954773)
chr5 (17-117)||(42500200-42500298)
chr5 (40-131)||(1465000-1465091)
chr5 (52-146)||(25461074-25461169)
chr5 (40-150)||(2568636-2568747)
chr5 (40-116)||(7705978-7706054)
chr5 (40-103)||(34669709-34669773)
chr5 (47-103)||(35446082-35446138)
chr5 (37-116)||(9202725-9202804)
chr5 (62-116)||(4014426-4014480)
chr5 (42-116)||(7984983-7985057)
chr5 (46-120)||(39477893-39477967)
chr5 (40-73)||(2973524-2973557)
chr5 (41-116)||(3280696-3280771)
chr5 (65-129)||(13697764-13697828)
chr5 (17-81)||(31038333-31038397)
chr5 (17-81)||(31047557-31047621)
chr5 (43-103)||(32859703-32859762)
chr5 (43-103)||(32861875-32861934)
chr5 (40-112)||(42646685-42646757)
[»] chr4 (36 HSPs)
chr4 (44-150)||(17822849-17822956)
chr4 (17-150)||(50681046-50681180)
chr4 (17-120)||(30668325-30668426)
chr4 (17-139)||(50662695-50662818)
chr4 (40-145)||(21731636-21731742)
chr4 (40-121)||(29657393-29657474)
chr4 (40-114)||(13126556-13126630)
chr4 (46-142)||(55414406-55414503)
chr4 (40-142)||(22030190-22030293)
chr4 (43-148)||(7839344-7839450)
chr4 (37-150)||(53294091-53294205)
chr4 (40-120)||(54426053-54426133)
chr4 (48-145)||(2244032-2244133)
chr4 (42-117)||(25904205-25904280)
chr4 (37-116)||(55302263-55302342)
chr4 (26-120)||(26831-26924)
chr4 (40-142)||(46588053-46588157)
chr4 (70-144)||(16199991-16200066)
chr4 (17-120)||(39603127-39603230)
chr4 (17-114)||(24169279-24169376)
chr4 (51-147)||(41512633-41512730)
chr4 (55-120)||(46592204-46592269)
chr4 (43-103)||(21523585-21523644)
chr4 (40-88)||(41336802-41336850)
chr4 (42-148)||(2996554-2996660)
chr4 (17-150)||(25332753-25332888)
chr4 (48-146)||(35571619-35571718)
chr4 (47-116)||(1407970-1408040)
chr4 (40-150)||(37863935-37864043)
chr4 (40-110)||(55064855-55064925)
chr4 (46-150)||(54069403-54069508)
chr4 (91-150)||(15177233-15177293)
chr4 (40-104)||(20109611-20109675)
chr4 (40-88)||(43886112-43886159)
chr4 (40-88)||(49939931-49939979)
chr4 (40-88)||(56249566-56249613)
[»] chr1 (41 HSPs)
chr1 (40-142)||(49938734-49938837)
chr1 (40-117)||(15477578-15477655)
chr1 (43-150)||(24915034-24915142)
chr1 (40-150)||(3233995-3234106)
chr1 (40-150)||(14576634-14576744)
chr1 (40-150)||(17603364-17603475)
chr1 (17-150)||(13809977-13810111)
chr1 (37-149)||(37631536-37631649)
chr1 (40-150)||(30286499-30286611)
chr1 (37-150)||(27976574-27976697)
chr1 (17-120)||(2295106-2295209)
chr1 (52-149)||(51688685-51688782)
chr1 (17-151)||(27970251-27970387)
chr1 (45-148)||(51929524-51929628)
chr1 (40-150)||(473143-473253)
chr1 (17-150)||(6556950-6557085)
chr1 (17-120)||(29904761-29904864)
chr1 (40-115)||(37473418-37473493)
chr1 (52-143)||(42174841-42174933)
chr1 (17-147)||(2777874-2778004)
chr1 (40-150)||(41184630-41184741)
chr1 (19-117)||(27820156-27820253)
chr1 (53-150)||(41195187-41195284)
chr1 (40-120)||(5720935-5721015)
chr1 (40-120)||(5741616-5741696)
chr1 (53-149)||(27820330-27820427)
chr1 (40-113)||(38503445-38503518)
chr1 (40-142)||(40977383-40977487)
chr1 (65-150)||(47432075-47432160)
chr1 (40-116)||(7136979-7137054)
chr1 (40-131)||(37842336-37842427)
chr1 (55-145)||(36872716-36872806)
chr1 (94-148)||(39596578-39596633)
chr1 (78-147)||(49888749-49888819)
chr1 (43-96)||(36872299-36872352)
chr1 (40-147)||(1432497-1432605)
chr1 (40-120)||(3887612-3887692)
chr1 (40-116)||(10199389-10199464)
chr1 (40-116)||(10744315-10744390)
chr1 (44-116)||(45975704-45975776)
chr1 (40-116)||(51695475-51695551)
[»] chr6 (17 HSPs)
chr6 (46-148)||(34430447-34430550)
chr6 (46-116)||(9763574-9763644)
chr6 (17-116)||(31813175-31813274)
chr6 (42-150)||(9093538-9093647)
chr6 (40-147)||(20368161-20368268)
chr6 (40-150)||(2735048-2735159)
chr6 (65-147)||(6536597-6536680)
chr6 (80-150)||(6909892-6909963)
chr6 (40-118)||(35070630-35070708)
chr6 (37-150)||(24626274-24626380)
chr6 (47-147)||(35099019-35099119)
chr6 (43-150)||(18076175-18076290)
chr6 (40-112)||(31624108-31624179)
chr6 (40-103)||(9912171-9912234)
chr6 (17-138)||(24982696-24982818)
chr6 (78-150)||(837234-837307)
chr6 (40-97)||(848022-848079)
[»] scaffold0050 (1 HSPs)
scaffold0050 (17-116)||(58756-58855)
[»] scaffold0221 (1 HSPs)
scaffold0221 (37-116)||(22245-22324)
[»] scaffold0528 (1 HSPs)
scaffold0528 (17-81)||(939-1003)


Alignment Details
Target: chr8 (Bit Score: 285; Significance: 1e-159; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 300 - 648
Target Start/End: Complemental strand, 6976018 - 6975665
Alignment:
Q  300 ctaactaaatacacaacgcatgtaacaatcatgggatgttatgattgatacacgagtctcaactctcacgtctcatgtgtaagaaattaataataattta 399  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6976018 ctaactaaatacacaacgcatgtaacaatcatgggatgttatgattgatacacgagtctcaactctcacgtctcatgtgtaagaaattaataataattta 6975919  T
Q  400 atacgtacgaagtacttggctatagttnnnnnnnntgattttcaaattacaaacaattttgctatatataaaacaaattggagattctattatcatgtca 499  Q
    |||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6975918 atacgtacgaagtacttggctatagttaaaaaaaatgattttcaaattacaaacaattttgctatatataaaacaaattggagattctattatcatgtca 6975819  T
Q  500 ctcgtatgcataatactatacaccatttatgagaaattgattgttaaatcgatgtgta----atcactt-caaaatactatccttaagaattaaggattt 594  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    ||||||| |||||||||||||||||||||||||| |||    
T  6975818 ctcgtatgcataatactatacaccatttatgacaaattgattgttaaatcgatgtgtaatcgatcacttccaaaatactatccttaagaattaagggttt 6975719  T
Q  595 tatccgttaactaatcaataagttagattatcataagagtcttttttgcctatg 648  Q
    ||||| ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  6975718 tatccattatctaatcaataagttagattagcataagagtcttttttgcctatg 6975665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 26771378 - 26771244
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||| |||  || |||||||||||||||||||||||| |||||| |||||||||||| ||||  |||||||||||||||| ||| |||||    
T  26771378 agttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcctttttcaacttattttcataagttctctaatatatcttat 26771279  T
Q  117 aaaacca-cttatagcaaatacaaaaacaatttaa 150  Q
    ||||  | ||||||||| |||||||||||||||||    
T  26771278 aaaaaaagcttatagcatatacaaaaacaatttaa 26771244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 10758240 - 10758347
Alignment:
Q  43 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaa-accacttatagcaaatacaaaa 141  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||   ||||||||||  |||| |||||||||||| || |||||||||| ||||||||    
T  10758240 ttatgaaaacagcttatgacaattttcaaaagcttttttcagcttgttttcataagtt-gctaatatagcttataaagacaacttatagcatatacaaaa 10758338  T
Q  142 acaatttaa 150  Q
    |||||||||    
T  10758339 acaatttaa 10758347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 27028915 - 27028810
Alignment:
Q  46 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaaca 144  Q
    ||||||||||||| |||| |||||||||||  |||||||||||  |||||||| |||| |||||||||||| |||||  ||||||||| ||||| |||||    
T  27028915 tgaaaacagcttaggacatttttcataagctattttcagcttattttcataagctctccaagatagcttatgaaaacagcttatagcatatacacaaaca 27028816  T
Q  145 atttaa 150  Q
    ||||||    
T  27028815 atttaa 27028810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 17 - 151
Target Start/End: Complemental strand, 38648464 - 38648329
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||| |||  || | ||||||||||||||| |||||| || |||||||| ||||| ||| ||| ||||||||||||  ||||||||||||    
T  38648464 agttttgtgagactgtttgggagaccttatgaaaacagctcatgacagttctcataagcttttttaagcgtaatttcataagttctacaagatagcttat 38648365  T
Q  117 -aaaaccacttatagcaaatacaaaaacaatttaat 151  Q
     ||||| ||| ||| || |||||||||||| |||||    
T  38648364 gaaaacaactcataacatatacaaaaacaagttaat 38648329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 18133769 - 18133635
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||| |||  || | ||| ||||| |||||||| ||| |||||| |||| ||||||||||||  ||||||||||||| || |||| ||||    
T  18133769 agttttgtgagactgtttgggagagcttgtgaaatcagcttataacaattttcacaagcttttttcagcttattttcataagttctccaatatagtttat 18133670  T
Q  117 aaaacca-cttatagcaaatacaaaaacaatttaa 150  Q
    ||||||| ||||||| | |||||||| ||||||||    
T  18133669 aaaaccagcttataggatatacaaaagcaatttaa 18133635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 25930533 - 25930646
Alignment:
Q  40 aacttatgaaaacagctta-tgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatac 137  Q
    |||||||||||| | |||| ||||||||||| ||||| ||||||||||||   ||| |||||||| |||||||||||| ||||| | ||| |||| ||||    
T  25930533 aacttatgaaaaaatcttaatgacacttttcgtaagcttttttcagcttactatcacaagttctccaagatagcttatgaaaacaatttaaagcatatac 25930632  T
Q  138 aaaaacaatttaat 151  Q
    ||||||| ||||||    
T  25930633 aaaaacattttaat 25930646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 12976302 - 12976223
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 120  Q
    ||||||||| |||||||| | ||| |||||| |||| ||||||||||||  |||||||||||||||| |||||||||||||    
T  12976302 aacttatgagaacagcttctaacaattttcaaaagcttttttcagcttat-ttcataagttctctaatatagcttataaaa 12976223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 35534570 - 35534702
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||| |||  || ||||| |||||||||||||||||| |||| | |||| |||||| |||||  ||||||||||||| || ||| |||||    
T  35534570 agttttgtgagactgtttgagagaacttgtgaaaacagcttatgacaattttaacaagcttttttcggcttactttcataagttctccaatataacttat 35534669  T
Q  117 -aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
     ||||| || ||||  | |||||||||||||||||    
T  35534670 gaaaacaacatata--acatacaaaaacaatttaa 35534702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 8146419 - 8146362
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataa 97  Q
    ||||||||||||||| |||||||||||||||||||  |||| |||||||| |||||||    
T  8146419 aacttatgaaaacagtttatgacacttttcataagttttttccagcttaatttcataa 8146362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 31716186 - 31716283
Alignment:
Q  19 ttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||| ||||||| |||  || ||||| |||||||||||||||||| | ||||||||| ||||||||||||  |  |||| ||||| ||||||||||||    
T  31716186 ttttttgagactgtttcggagaacttttgaaaacagcttatgacattcttcataagcttttttcagcttatttctataacttctccaagatagcttat 31716283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 10120846 - 10120783
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctc 103  Q
    |||||||||||||||||||||||| || ||||| ||  |||||||||||  |||||||||||||    
T  10120846 aacttatgaaaacagcttatgacatttatcatatgctgttttcagcttattttcataagttctc 10120783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 16825518 - 16825628
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata-aaaccacttatagcaaataca 138  Q
    |||||||||||| ||||||||||| |||||||||| |||||||| ||||  |||||||||||   || ||||||| || |||| ||||||| |  | |||    
T  16825518 aacttatgaaaatagcttatgacaattttcataag-ctttttcaacttattttcataagttcggcaatatagcttgtagaaacaacttataacgtaaaca 16825616  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  16825617 aaaacaatttaa 16825628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 29168015 - 29168146
Alignment:
Q  18 gttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta-t 116  Q
    ||||| ||||||| |||  || ||||||| ||||||| |||||||| |||||||||   ||| ||||||||  | ||||||||||| ||||||||| |      
T  29168015 gttttgtgagactgtttgggagaacttataaaaacagattatgacatttttcataaatgtttctcagcttatttccataagttctccaagatagctcagg 29168114  T
Q  117 aaaaccacttatagcaaatacaaaaacaattt 148  Q
    |||||  ||||||||| ||||||||| |||||    
T  29168115 aaaacagcttatagcatatacaaaaataattt 29168146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 29205897 - 29205787
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    ||||||| |||||||| ||||||| |||||||||| |||||| | | ||  ||||||| ||||| || |||| |||| ||||  |||||||||| |||||    
T  29205897 aacttattaaaacagcgtatgacatttttcataag-cttttttaacctactttcataaattctccaaaatagtttatgaaaataacttatagcatataca 29205799  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  29205798 aaaacaatttaa 29205787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 30251434 - 30251540
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||| |||||||||||||  || ||||||||||| |||| |||||||  |||||||||  || |||||||||||| |||||  |||||| || |||||    
T  30251434 aacttacgaaaacagcttattgcatttttcataagctttttacagcttattttcataagtggtccaagatagcttatgaaaacagcttataacatataca 30251533  T
Q  139 aaaacaa 145  Q
    | |||||    
T  30251534 ataacaa 30251540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 37945686 - 37945576
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaa 139  Q
    ||||| |||||||||||||||||| ||| ||||||| ||||| | ||||  |||| ||||| |  || ||||||||||||| ||  ||||||| ||||||    
T  37945686 aacttctgaaaacagcttatgacaatttccataagcattttttaacttattttcagaagttgtacaatatagcttataaaaacaactatagcatatacaa 37945587  T
Q  140 aaacaatttaa 150  Q
    ||  |||||||    
T  37945586 aattaatttaa 37945576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 43045689 - 43045783
Alignment:
Q  24 tgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataa 118  Q
    ||||||| |||| || | |||||||||||||||||  ||| |||| |||||| ||||||| ||||  ||||||||||||| || |||| ||||||    
T  43045689 tgagactgttttggagatcttatgaaaacagcttacaacaattttaataagcttttttcaacttattttcataagttctccaatatagtttataa 43045783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 6882040 - 6881908
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttca-gcttaaattcataagttctctaagatagctta 115  Q
    |||||| ||||||| |||  || ||| ||||||||||||| |||| | |||| | |||| |||||   |||||  ||||||||||||| ||  |||||||    
T  6882040 agttttgtgagactgtttgggagaacctatgaaaacagctcatgataattttaacaagctttttttttgcttattttcataagttctccaatttagctta 6881941  T
Q  116 taaaaccacttatagcaaatacaaaaacaattt 148  Q
    ||||||  ||||||||| ||| |||||||||||    
T  6881940 taaaacagcttatagcatatataaaaacaattt 6881908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 28763481 - 28763417
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt 81  Q
    |||||| ||||||| |||  || |||||||||||||||||||| ||| ||||||||||| |||||    
T  28763481 agttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctttttt 28763417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 35643947 - 35644031
Alignment:
Q  19 ttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctc 103  Q
    |||| ||||||| |||  || |||||||||||| || |||||||| ||||||||||| ||||||| ||||  |||||||| ||||    
T  35643947 ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctctc 35644031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 35749550 - 35749626
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||||||||||||||| |  || ||||||||| | ||||||| | ||  |||||||||||| |||||||||||||    
T  35749550 aacttatgaaaacagcttgtagcatttttcataaacttttttcaacatattttcataagttctttaagatagcttat 35749626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 16347279 - 16347200
Alignment:
Q  42 cttatgaaaacagctta-tgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 120  Q
    ||||||||||||  ||| ||||||||||||||||| || ||||||||||  ||||||||||   ||||||| ||||||||    
T  16347279 cttatgaaaacaagttaatgacacttttcataagctttattcagcttaatatcataagttcaacaagatagtttataaaa 16347200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 42043377 - 42043436
Alignment:
Q  92 tcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
    |||| |||||||||||||||||||| ||||| ||||||| || || ||||||||||||||    
T  42043377 tcattagttctctaagatagcttatgaaaacaacttatatcatatccaaaaacaatttaa 42043436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 9956794 - 9956884
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttata 129  Q
    |||||||||||| || ||||| || | ||||||||   |||||||||||  ||||||||||||| ||||||| |||| ||||| |||||||    
T  9956794 aacttatgaaaatagtttatggcattgttcataagtagttttcagcttattttcataagttctccaagatagattatgaaaacaacttata 9956884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 1058034 - 1058126
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagata 110  Q
    |||||| ||||||| |||  || ||||| ||||||| |||||||||| ||||||| ||  |||||| |||||  ||||||||||||| ||||||    
T  1058034 agttttgtgagactgtttgggagaacttttgaaaactgcttatgacatttttcattagt-tttttccgcttattttcataagttctccaagata 1058126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 40859763 - 40859796
Alignment:
Q  41 acttatgaaaacagcttatgacacttttcataag 74  Q
    ||||||||||||||||||||||| ||||||||||    
T  40859763 acttatgaaaacagcttatgacaattttcataag 40859796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 1930125 - 1930049
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    ||||| ||||||||| |||||||| | |||||||||  |||||||||||  |||| ||| || | ||||||||||||    
T  1930125 aacttgtgaaaacagtttatgacattgttcataagctgttttcagcttattttcacaaggtcaccaagatagcttat 1930049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 10114579 - 10114471
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||||||||||| ||||| ||| || ||||| ||  |||||||||||  |||||| |||||| || |||||| || |||||  ||||||||  ||||     
T  10114579 aacttatgaaaacaacttataacatttatcatatgctgttttcagcttattttcatatgttctccaatatagctaatgaaaacagcttatagcttatacc 10114480  T
Q  139 aaaacaatt 147  Q
    |||||||||    
T  10114479 aaaacaatt 10114471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 10383974 - 10383927
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagctta 88  Q
    |||||||||||||||||||||||| |||||||||||  ||| |||||||    
T  10383974 aacttatgaaaacagcttatgaca-ttttcataagctgtttacagctta 10383927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 11861843 - 11861791
Alignment:
Q  91 ttcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaa 142  Q
    |||||||||||||||  ||||||||| ||||| |||||||||| |||||||||    
T  11861843 ttcataagttctctattatagcttataaaaacaacttatagcatatacaaaaa 11861791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 151; Significance: 1e-79; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 33601984 - 33602166
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33601984 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 33602083  T
Q  117 aaaaccacttatagcaaatacaaaaacaatttaatacnnnnnnnctataacgaaattg--ctgttacgttgattttccagatc 197  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||  |||||||||||||||||||||||    
T  33602084 aaaaccacttatagcaaatacaaaaacaatttaatacaaaaaaactataacgaaattgctctgttacgttgattttccagatc 33602166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 33601367 - 33601500
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33601367 agttttgtgagactcttttcgagaacttatgaaaacagcttatgacacttttcataagcttttttcagcttaaattcataagttctctaagatagcttat 33601466  T
Q  117 aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
    ||||| |||||||||||||||||||| |||||||    
T  33601467 aaaacaacttatagcaaatacaaaaataatttaa 33601500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 17944323 - 17944434
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    ||||||| ||||||||||||||||||||||||| || ||||||||||||| ||||||| || || |||||| ||||| ||||| ||||| | || |||||    
T  17944323 aacttataaaaacagcttatgacacttttcatatgcttttttcagcttaatttcataaattatccaagataacttatgaaaacaacttacaacatataca 17944422  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  17944423 aaaacaatttaa 17944434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 48470157 - 48470023
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||||||||| | |||  || ||||||||||||||||||||| || ||||||||||| ||||| ||||||  |||||||||| |  || |||||||||    
T  48470157 agttttatgagattgtttgggagaacttatgaaaacagcttatggcatttttcataagcttttttgagcttatgttcataagttattcaaaatagcttat 48470058  T
Q  117 -aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
     ||||| |||||||  | |||||||||||||||||    
T  48470057 gaaaacaacttatattatatacaaaaacaatttaa 48470023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 30570911 - 30571022
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaataca 138  Q
    ||||| |||||||||||||||||| ||||||||||| |||||||  |||| ||||||||||||| ||  ||| ||||||||  | ||||||||| |||||    
T  30570911 aacttgtgaaaacagcttatgacaattttcataagcttttttcatgttaatttcataagttctccaatgtaggttataaaaatagcttatagcatataca 30571010  T
Q  139 aaaacaatttaa 150  Q
    |||| |||||||    
T  30571011 aaaataatttaa 30571022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 39968010 - 39967899
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    ||||||||||||||||||||| || | |||||||||  |||||| ||||  ||||| |||||||| ||||||||||| ||||| ||||||||| | |||     
T  39968010 aacttatgaaaacagcttatggcattgttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttatagctagtacg 39967911  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  39967910 aaaacaatttaa 39967899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 11619141 - 11619218
Alignment:
Q  43 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 120  Q
    ||||||||||| ||||||||| ||||||||||| ||||||| ||||| ||||||||||||| ||  ||||||||||||    
T  11619141 ttatgaaaacaacttatgacaattttcataagcttttttcaacttaatttcataagttctccaacgtagcttataaaa 11619218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 27863682 - 27863815
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta- 115  Q
    |||||| ||||||| |||  || ||||||||||||||||||  || | |||||| || | ||||||||||||  |||||||||||||||| |||| |||     
T  27863682 agttttgtgagactatttgagagaacttatgaaaacagcttgagaaaattttcaaaaacttttttcagcttatgttcataagttctctaatatagtttat 27863781  T
Q  116 taaaaccacttatagcaaatacaaaaacaattta 149  Q
    |||||| |||||||||| ||||||| | ||||||    
T  27863782 taaaacaacttatagcatatacaaataaaattta 27863815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 420450 - 420342
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta-taaaaccacttatagcaaataca 138  Q
    ||||||||||||||  |||||||| |||||  |||||||||||| ||||  ||||||||||||| || ||||||||   |||| |||||||||| |||||    
T  420450 aacttatgaaaacaatttatgacagttttctaaagcctttttcaacttattttcataagttctccaatatagcttacggaaacaacttatagcatataca 420351  T
Q  139 aaaacaatt 147  Q
    |||||||||    
T  420350 aaaacaatt 420342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 19302546 - 19302650
Alignment:
Q  43 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaa 141  Q
    ||||||||||||||||||||| ||||||||| | ||||||| ||||  ||||||||||||     ||||||||| ||||| ||||||| || ||||||||    
T  19302546 ttatgaaaacagcttatgacaattttcataaacttttttcaacttattttcataagttct----tatagcttataaaaacaacttataacatatacaaaa 19302641  T
Q  142 acaatttaa 150  Q
    |||||||||    
T  19302642 acaatttaa 19302650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 38499878 - 38499969
Alignment:
Q  25 gagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    ||||||||||  || ||||| | |||||||||||||||| ||||||||||| |||| |||||||  ||||||||||||| ||||| ||||||    
T  38499878 gagactctttgggagaacttttcaaaacagcttatgacatttttcataagctttttccagcttattttcataagttctccaagattgcttat 38499969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 21568454 - 21568555
Alignment:
Q  19 ttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataa 118  Q
    |||| ||||||| |||  || |||||||||||||||||||| ||| |||||||||||  |||||| ||||  | ||||||||||| || |||||||||||    
T  21568454 ttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctcttttcaacttagttccataagttctccaatatagcttataa 21568553  T
Q  119 aa 120  Q
    ||    
T  21568554 aa 21568555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 48507797 - 48507701
Alignment:
Q  56 ttatgacacttttcataagcctttttcagcttaaattcataagttctctaa-gatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
    |||||||| |||| |||||  ||||||||||||| |||||||||||||||| ||| |||||| |||||   |||||||| |||||||||||||||||    
T  48507797 ttatgacattttttataagtatttttcagcttaatttcataagttctctaaggatggcttatgaaaacagtttatagcatatacaaaaacaatttaa 48507701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 46280284 - 46280363
Alignment:
Q  72 aagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaatttaa 150  Q
    |||| ||||||||| ||  ||||||||||||| || ||||||||||||| || ||||||||| |||||||||||||||||    
T  46280284 aagcttttttcagcctattttcataagttctccaatatagcttataaaaacagcttatagcatatacaaaaacaatttaa 46280363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 39629943 - 39630017
Alignment:
Q  46 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 120  Q
    |||||||||||||||||| ||||||||||| ||||||| |||| | |||||||||||  || |||||||| ||||    
T  39629943 tgaaaacagcttatgacaattttcataagcttttttcaacttatagtcataagttcttcaatatagcttaaaaaa 39630017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 19022568 - 19022676
Alignment:
Q  43 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaa 141  Q
    ||||||||||| ||||||||| ||||||||||   | |||| ||||  ||||||||||||| || ||||||||| ||||| ||||||||||  ||  |||    
T  19022568 ttatgaaaacaacttatgacaattttcataagttgtcttcaacttattttcataagttctccaatatagcttataaaaacaacttatagcatttattaaa 19022667  T
Q  142 acaatttaa 150  Q
    |||||||||    
T  19022668 acaatttaa 19022676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 34744118 - 34744010
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||| ||||||| | ||||||||| |||||| |||| ||||||  ||||  || |||||||||| || ||||||||| ||||| ||||||| || |||||    
T  34744118 aactaatgaaaagaacttatgacaattttcacaagcttttttcgccttatttttataagttctccaatatagcttatgaaaacaacttataccatataca 34744019  T
Q  139 aaaacaatt 147  Q
    |||||||||    
T  34744018 aaaacaatt 34744010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 55 - 150
Target Start/End: Complemental strand, 45338523 - 45338428
Alignment:
Q  55 cttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaaaaacaatttaa 150  Q
    ||||||||| |||| || ||  ||||||| ||||  ||||| ||||||| || |||||||| ||||| ||||| |||| |||||||||||||||||    
T  45338523 cttatgacaatttttattagtttttttcaacttattttcatcagttctccaatatagcttaaaaaacaacttacagcatatacaaaaacaatttaa 45338428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 20428555 - 20428494
Alignment:
Q  49 aaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagata 110  Q
    ||||||||||||||| || |||||||| ||||||||||||  ||| ||||||| ||||||||    
T  20428555 aaacagcttatgacagttctcataagcttttttcagcttattttcgtaagttccctaagata 20428494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 45593618 - 45593505
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagccttttt-cagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatac 137  Q
    ||||||| |||||| || |||||| ||||||||||| ||||| ||| |||  ||| ||||||||| ||||||||||| ||||  | ||||||||| ||||    
T  45593618 aacttataaaaacatctgatgacatttttcataagcttttttccagtttattttcgtaagttctccaagatagcttagaaaaatagcttatagcatatac 45593519  T
Q  138 aaaaacaatttaat 151  Q
    |||||  |||||||    
T  45593518 aaaaaatatttaat 45593505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 5947274 - 5947198
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    ||||| ||||| ||||||||| || |||||||||||  |||||||||||  ||||||| |||||  |||||||||||    
T  5947274 aacttttgaaaccagcttatggcatttttcataagctcttttcagcttattttcataacttctcctagatagcttat 5947198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 20526557 - 20526425
Alignment:
Q  19 ttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-a 117  Q
    |||| ||||||| |||  || ||||||||||||||| |||| ||| ||||| |||||  |||| ||||||  ||||| ||||||| || ||||||||| |    
T  20526557 ttttgtgagactgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctgtttttagcttattttcattagttctccaaaatagcttatga 20526458  T
Q  118 aaaccacttatagcaaatacaaaaacaatttaa 150  Q
    ||||  |||||||||  |||||| | |||||||    
T  20526457 aaacagcttatagcatgtacaaacataatttaa 20526425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 28614523 - 28614443
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 120  Q
    |||||||||||||| | ||| ||| |||||| |||| |||||||| |||| ||||||||||||| || | ||||| |||||    
T  28614523 aacttatgaaaacaacatataacaattttcacaagcttttttcagtttaatttcataagttctccaatacagcttttaaaa 28614443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 146
Target Start/End: Original strand, 38138475 - 38138566
Alignment:
Q  56 ttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaat 146  Q
    |||||||| ||||||||||| ||||||| ||||  |||||||||||   || |||||| || ||||| |||||||||| |||||||| ||||    
T  38138475 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 38138566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 4970824 - 4970882
Alignment:
Q  91 ttcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaattt 148  Q
    |||||||||||||||| ||| ||||| ||||  |||||||||| |||||||||||||||    
T  4970824 ttcataagttctctaatatatcttataaaaagaacttatagcatatacaaaaacaattt 4970882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 19214386 - 19214476
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata-aaaccacttata 129  Q
    ||||||||||||||||  |||||| ||||||||| | | ||||| ||||  ||||||||||||  || |||||||||| |||| |||||||    
T  19214386 aacttatgaaaacagcaaatgacaattttcataaacttgtttcaacttattttcataagttctacaatatagcttatacaaacaacttata 19214476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 28341052 - 28341129
Alignment:
Q  55 cttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata-aaaccacttatagca 132  Q
    ||||||||| |||||| |||| |||| |||||||  |||||||||||||||| |||| ||||| |||| ||||||||||    
T  28341052 cttatgacaattttcaaaagctttttccagcttat-ttcataagttctctaatatagtttatacaaacaacttatagca 28341129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 28900960 - 28900903
Alignment:
Q  46 tgaaaacagcttatgacacttt-tcataagcctttttcagcttaaattcataagttct 102  Q
    |||||||||||||||||| ||| || |||| |||||||||||||  ||||||||||||    
T  28900960 tgaaaacagcttatgacattttctcgtaaggctttttcagcttattttcataagttct 28900903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 39280050 - 39279941
Alignment:
Q  42 cttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaa 140  Q
    ||||| ||||||||||||  || ||| ||||||| ||||||||||||  |||| |||||||| ||||||  |||| ||| || | |||| || ||||| |    
T  39280050 cttataaaaacagcttatagcattttacataagcttttttcagcttattttcaaaagttctccaagataatttatgaaatcagcctataacatatacaca 39279951  T
Q  141 aacaatttaa 150  Q
    ||||||||||    
T  39279950 aacaatttaa 39279941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 39907855 - 39907782
Alignment:
Q  78 ttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
    |||||||||||  ||||| ||||||||||||||| |||| |||||   |||||||  |||||||||||||||||    
T  39907855 ttttcagcttattttcattagttctctaagatagtttatgaaaacagtttatagcttatacaaaaacaatttaa 39907782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 151
Target Start/End: Original strand, 3308208 - 3308344
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttt-tcataagcctttttcagcttaaattcataagttctctaagatagctta 115  Q
    ||||||||| |||| |||  || ||||| |||||| |||||||| || ||| |||||||| ||||||||||||  || |||||||||| || ||| |||     
T  3308208 agttttatgtgactgtttgggagaacttttgaaaatagcttatgccattttctcataagcttttttcagcttattttaataagttctcaaacataacttc 3308307  T
Q  116 t-aaaaccacttatagcaaatacaaaaacaatttaat 151  Q
    | ||||   ||||||||| ||| | ||||||||||||    
T  3308308 tgaaaatatcttatagcatataaataaacaatttaat 3308344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 7467648 - 7467588
Alignment:
Q  91 ttcataagttctctaagatagcttataaaaccacttatagcaaatac-aaaaacaatttaa 150  Q
    ||||||||||| |||||||| ||| | ||| ||||||||||| |||| |||||||||||||    
T  7467648 ttcataagttcactaagataacttctgaaatcacttatagcatatacaaaaaacaatttaa 7467588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 20234505 - 20234461
Alignment:
Q  108 atagctta-taaaaccacttatagcaaatacaaaaacaatttaat 151  Q
    |||||||| |||||| ||||||||||| |||||||||||||||||    
T  20234505 atagcttagtaaaacaacttatagcaattacaaaaacaatttaat 20234461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 34036007 - 34035931
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||||||||| | ||||||||| | ||||||||   |||||| ||||  |||  |||||||||||||||||||||    
T  34036007 aacttatgaaaataacttatgacattgttcataagttgttttcaacttattttcgcaagttctctaagatagcttat 34035931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 34464202 - 34464242
Alignment:
Q  41 acttatgaaaacagcttatgacacttttcataagccttttt 81  Q
    ||||||||||||||||||||||| |||||| |||| |||||    
T  34464202 acttatgaaaacagcttatgacaattttcacaagctttttt 34464242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 43250681 - 43250756
Alignment:
Q  41 acttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 117  Q
    ||||||||||||||||||||||| | ||| ||||   ||||||| ||| ||||||||| |||| || ||||||||||    
T  43250681 acttatgaaaacagcttatgaca-tgttcgtaagttgttttcagtttatattcataagctctccaaaatagcttata 43250756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 43694601 - 43694661
Alignment:
Q  91 ttcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaatttaa 150  Q
    ||||||||||||   | ||||||||||||| || ||||||||| |||||||||||||||||    
T  43694601 ttcataagttcttcgatatagcttataaaaacagcttatagcatatacaaaaacaatttaa 43694661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 45790406 - 45790485
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 120  Q
    |||||||||||| | ||||||||| |||| | |||| ||||||||||||  |||||||||| || || |||| ||||||||    
T  45790406 aacttatgaaaataacttatgacaatttttaaaagc-tttttcagcttattttcataagttatccaatatagtttataaaa 45790485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 7e-26; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 53789441 - 53789553
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    ||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| | |||||||||| | ||| |||||||||| ||||     
T  53789441 aacttttggaaacagcttatgacacttttcataagcttttttcagcttaatttcataagttctccatgatagcttatgataacaacttatagcatatacc 53789540  T
Q  139 aaaacaatttaat 151  Q
    |||||| ||||||    
T  53789541 aaaacattttaat 53789553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 30443981 - 30443872
Alignment:
Q  42 cttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaa 140  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||||  ||||||||||||| || |||| |||||||| || ||||||||| |||||||    
T  30443981 cttatgaaaacagcttatgacaattttcacaagcttttttcagcttattttcataagttctccaatatagtttataaaaacagcttatagcatatacaaa 30443882  T
Q  141 aacaatttaa 150  Q
    | ||||||||    
T  30443881 agcaatttaa 30443872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 20880562 - 20880455
Alignment:
Q  44 tatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaa 142  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||||  ||||||||||||| || ||||||| ||||| ||  |||||||| |||||||||    
T  20880562 tatgaaaacagcttatgacaattttcataagcttttttgagcttattttcataagttctccaatatagcttttaaaaacagtttatagcatatacaaaaa 20880463  T
Q  143 caatttaa 150  Q
    ||||||||    
T  20880462 caatttaa 20880455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 18405788 - 18405914
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||| ||| | | ||||||||||||||| | | |||||||||||||| | ||||  ||||||| ||||||||||||| ||||||||||||    
T  18405788 agttttgtgagactgtttgcaagaacttatgaaaacagttcacgacacttttcataatctttttcaagcttaatttcataagttctccaagatagcttat 18405887  T
Q  117 -aaaaccacttatagcaaatacaaaaa 142  Q
     ||||| |||||||||| |||||||||    
T  18405888 gaaaacaacttatagcatatacaaaaa 18405914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 39980842 - 39980708
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||| |||  || |||||||||||||||||||||||   |||||||||| ||||||| ||||  ||||||||||||| || |||||||||    
T  39980842 agttttgtgagactgtttaagagaacttatgaaaacagcttatgactggtttcataagcttttttcaacttattttcataagttctccaatatagcttat 39980743  T
Q  117 -aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
     ||||| ||||||||||  | ||||||||||||||    
T  39980742 aaaaacaacttatagcatgttcaaaaacaatttaa 39980708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 21367757 - 21367646
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||||||||||||||||||||| | |||| ||||  |||||||||||  ||||||||||||| |||||||||||| ||||| |||||||    ||||     
T  21367757 aacttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttatacattatacg 21367658  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  21367657 aaaacaatttaa 21367646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 36631031 - 36631142
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    ||||||||||| |||||||||||  |||||| |||| |||||| |||||  ||||||||||||| || |||||| || ||||| ||||||||||  ||||    
T  36631031 aacttatgaaaccagcttatgacgattttcaaaagcttttttctgcttattttcataagttctccaatatagctcataaaaacaacttatagcatgtaca 36631130  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  36631131 aaaacaatttaa 36631142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 402526 - 402633
Alignment:
Q  44 tatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaa 142  Q
    |||||||||||||||||||| | |||||||||  |||||||||||| |||| |||||||  ||||||| |||||||| || |||||| |  |||| ||||    
T  402526 tatgaaaacagcttatgacattgttcataagctgttttcagcttaatttcacaagttcttcaagatagattataaaaacagcttataacttatacgaaaa 402625  T
Q  143 caatttaa 150  Q
    ||||||||    
T  402626 caatttaa 402633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 902017 - 901934
Alignment:
Q  37 gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 120  Q
    |||||||||||||||||||| || ||| ||| ||||||| ||||||| ||||  ||||||||||||| || |||||||||||||    
T  902017 gaaaacttatgaaaacagctaataacattttccataagcttttttcaacttattttcataagttctccaatatagcttataaaa 901934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 584152 - 584025
Alignment:
Q  24 tgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaac-c 122  Q
    ||||||| |||| || || |||||||||||||||| | || |||||||| |  | ||| ||||||| ||||||||||||  |||||||||||| ||||      
T  584152 tgagactgttttggagaatttatgaaaacagcttacggcagttttcataggtttctttaagcttaatttcataagttcttcaagatagcttatgaaacta 584053  T
Q  123 acttatagcaaatacaaaaacaatttaa 150  Q
    ||||||||||   |||||||||||||||    
T  584052 acttatagcatgaacaaaaacaatttaa 584025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 20170613 - 20170502
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaataca 138  Q
    |||||| |||||||||| |||  | ||||||||||| ||||||| ||||  ||||| ||||||| || ||| ||| ||||| || ||||||||| |||||    
T  20170613 aacttaagaaaacagctaatgggatttttcataagcttttttcaacttattttcattagttctcaaaaataacttgtaaaaacaacttatagcatataca 20170514  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  20170513 aaaacaatttaa 20170502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 24085295 - 24085398
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| |||||||  ||| || |||||||||||||||||||||  ||| |||||| ||  |||||||||||  |||| |||||||| |||||||||||     
T  24085295 agttttgtgagactggtttggagaacttatgaaaacagcttatggtactgttcatacgctgttttcagcttattttcacaagttctccaagatagcttac 24085394  T
Q  117 aaaa 120  Q
    ||||    
T  24085395 aaaa 24085398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 46031103 - 46031004
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||||||||||| |||  || |||||| ||||||||| ||||||| | |||||||||  |||||||||||  || |||||||||| ||||||| ||||    
T  46031103 agttttatgagactgtttcagagaacttacgaaaacagcctatgacattattcataagctgttttcagcttattttaataagttctccaagatagtttat 46031004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 46778171 - 46778281
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||||||||||| ||||||||| ||||||||||  || |||||||| | |||||||||| || ||||||| |||| |||||   |||||||| | |||    
T  46778171 aacttatgaaaacaacttatgacatttttcataagttttgttcagctt-atttcataagttgtccaagatagtttatgaaaacagtttatagcataaaca 46778269  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  46778270 aaaacaatttaa 46778281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 35959454 - 35959547
Alignment:
Q  58 atgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata-aaaccacttatagcaaatacaaaaacaatttaa 150  Q
    |||||| |||||| |||| ||||||||||||  |||| || |||||||| |||||||||| |||| ||||| |||| ||||||||| |||||||    
T  35959454 atgacaattttcaaaagcttttttcagcttattttcaaaaattctctaatatagcttatagaaacaacttacagcatatacaaaaataatttaa 35959547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 46478767 - 46478684
Alignment:
Q  52 cagcttatgacacttttcataagcctttttcagcttaaattcataagttctcta--agatagcttataaaacc-acttatagca 132  Q
    |||||||||||| ||||||||||| ||||||| ||||  ||||||||||||| |  | ||||||||||||||| ||||||||||    
T  46478767 cagcttatgacagttttcataagcttttttcaacttattttcataagttctccaatatatagcttataaaaccaacttatagca 46478684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 22203520 - 22203429
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatag 130  Q
    |||||||||||||||||||||||| ||| | ||||| |  | ||| |||  ||||||||||||| |||||||||||| ||||| ||||||||    
T  22203520 aacttatgaaaacagcttatgacattttacttaagcttaatgcagtttattttcataagttctccaagatagcttatgaaaacaacttatag 22203429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 31365145 - 31365211
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttca 83  Q
    |||||| ||||||| |||  || ||||||||||| |||||||||||| ||||||||||| |||||||    
T  31365145 agttttgtgagactgtttgggagaacttatgaaagcagcttatgacaattttcataagcttttttca 31365211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 151
Target Start/End: Complemental strand, 47132391 - 47132309
Alignment:
Q  70 ataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaatttaat 151  Q
    |||||| ||||||| ||||  ||||||| ||||| || ||||||||||||| || | ||||||| ||||||||||||||||||    
T  47132391 ataagcttttttcaacttattttcataacttctccaatatagcttataaaaacaacctatagcatatacaaaaacaatttaat 47132309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 20257647 - 20257514
Alignment:
Q  19 ttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaatt-cataagttctctaagatagctt-at 116  Q
    |||| ||||||| |||  || ||||||||||| ||||| |||||| ||||||||||  ||||  | ||||  || |||||| |||| || ||||||| |     
T  20257647 ttttgtgagactgtttgggagaacttatgaaagcagctaatgacaattttcataagttttttaaaacttatttttcataagctctccaatatagcttcaa 20257548  T
Q  117 aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
    ||||| |||||||||| |||||||||||||||||    
T  20257547 aaaacaacttatagcatatacaaaaacaatttaa 20257514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 37689319 - 37689212
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||| ||||||||||||||||| |||||| |||| ||||||| ||||  ||||||||| |||| | ||| || || ||||| || ||||||| |||||    
T  37689319 aacttaagaaaacagcttatgacaattttca-aagcttttttcaacttattttcataagtgctctgatata-ctcataaaaacaacctatagcatataca 37689222  T
Q  139 aaaacaattt 148  Q
    ||||||||||    
T  37689221 aaaacaattt 37689212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 49556945 - 49556900
Alignment:
Q  43 ttatgaaaacagcttatgacacttttcataagcctttttcagctta 88  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  49556945 ttatgaaaacagcttatgacaattttcataagcttttttcaactta 49556900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 4401127 - 4401026
Alignment:
Q  47 gaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaaaaacaat 146  Q
    ||||||||||||||||| ||| |||||||  |||| | ||||  ||||||||||||| || ||| ||  |||||| |||||||||| |||| |||| |||    
T  4401127 gaaaacagcttatgacaatttccataagctgtttttaacttattttcataagttctccaatataact--taaaacaacttatagcatatacgaaaataat 4401030  T
Q  147 ttaa 150  Q
    ||||    
T  4401029 ttaa 4401026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 34610786 - 34610862
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    ||||||||||||| |||||||||| | ||||||||   ||||||||| |  ||||||||||| | ||||||||||||    
T  34610786 aacttatgaaaactgcttatgacattgttcataagtggttttcagctgattttcataagttcgccaagatagcttat 34610862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 44061046 - 44061114
Alignment:
Q  83 agcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
    ||||||| |||||||||||||||||||| | ||| ||||| |||||||||  ||| |||||||||||||    
T  44061046 agcttaatttcataagttctctaagatatcatatgaaaacaacttatagcttatagaaaaacaatttaa 44061114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 45541660 - 45541585
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||||||||||||||||||||| | |||||||||  ||||||| |||   ||||||||| || ||||||||||||    
T  45541660 aacttatgaaaacagcttatgaca-tgttcataagctgttttcaggttattctcataagttatccaagatagcttat 45541585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 13715560 - 13715665
Alignment:
Q  48 aaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat---aaaaccacttatagcaaatacaaaaaca 144  Q
    ||||||||||||||||  |||||||||| ||||||| ||||  |||||||||| || || || ||||||   ||||| ||||||| || |||||||| ||    
T  13715560 aaaacagcttatgacaactttcataagcatttttcaacttattttcataagttgtccaatatcgcttatataaaaacaacttatatcatatacaaaatca 13715659  T
Q  145 atttaa 150  Q
    | ||||    
T  13715660 aattaa 13715665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 28795839 - 28795910
Alignment:
Q  46 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 117  Q
    ||||||| | || ||||| ||||| |||||  |||||||||||  |||||||||||||||| ||||||||||    
T  28795839 tgaaaacggtttttgacaattttcttaagctcttttcagcttattttcataagttctctaatatagcttata 28795910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 30956659 - 30956717
Alignment:
Q  93 cataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
    ||||||||||| |||||||||| | ||||| |||||||||  |||||||||||||||||    
T  30956659 cataagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaa 30956717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 30972471 - 30972529
Alignment:
Q  93 cataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
    ||||||||||| |||||||||| | ||||| |||||||||  |||||||||||||||||    
T  30972471 cataagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaa 30972529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 33883768 - 33883806
Alignment:
Q  78 ttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  33883768 ttttcagcttattttcataagttctctaagatagcttat 33883806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 466304 - 466207
Alignment:
Q  19 ttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||| ||||||| |||  || ||||||  |||||||||| | ||| ||||| ||||| ||||| ||||||  ||||||||||||| || |||||||||    
T  466304 ttttgtgagactgtttgggataacttacaaaaacagcttttaacatttttcttaagctttttttagcttattttcataagttctccaacatagcttat 466207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 944655 - 944591
Alignment:
Q  37 gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc 101  Q
    ||||||||||||||| ||||||||||| ||| ||||| | ||||||| ||||  |||||| ||||    
T  944655 gaaaacttatgaaaatagcttatgacaatttccataatcttttttcaacttactttcatatgttc 944591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 26911671 - 26911627
Alignment:
Q  44 tatgaaaacagcttatgacacttttcataagcctttttcagctta 88  Q
    |||||||||||||||||||| ||||||||||  ||||||| ||||    
T  26911671 tatgaaaacagcttatgacaattttcataagtttttttcaactta 26911627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 34034210 - 34034158
Alignment:
Q  18 gttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttca 70  Q
    ||||| |||||||||||  || ||||||||||||||||||| |||| ||||||    
T  34034210 gttttgtgagactctttaggagaacttatgaaaacagcttaggacagttttca 34034158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 7e-26; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 41851622 - 41851514
Alignment:
Q  43 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaa 141  Q
    ||||| ||||| ||||||||||||||||||||| ||| ||||||||| ||||||| ||||| |||||||||| | ||||| |||||||||| ||||||||    
T  41851622 ttatggaaacaacttatgacacttttcataagcttttctcagcttaatttcataaattctccaagatagcttctgaaaacaacttatagcatatacaaaa 41851523  T
Q  142 acaatttaa 150  Q
    |||||||||    
T  41851522 acaatttaa 41851514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 45229601 - 45229491
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaa 139  Q
    |||||||||||| | ||||||||| ||||||| ||| ||||||||||||  ||||||||||||| |||||||||||| ||| || | ||| || ||||||    
T  45229601 aacttatgaaaagaccttatgacatttttcattagcttttttcagcttattttcataagttctcgaagatagcttatgaaaacaatgataacatatacaa 45229502  T
Q  140 aaacaatttaa 150  Q
    |||||||||||    
T  45229501 aaacaatttaa 45229491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 43 - 148
Target Start/End: Original strand, 43279512 - 43279616
Alignment:
Q  43 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaa 141  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||||  |||| |||||||| || ||||||||| ||||| |||||||||  ||||||||    
T  43279512 ttatgaaaacagcttatgacaattttcataagcttttttcaacttattttcacaagttctccaatatagcttataaaaacaacttatagc--atacaaaa 43279609  T
Q  142 acaattt 148  Q
    |||||||    
T  43279610 acaattt 43279616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 33981214 - 33981140
Alignment:
Q  38 aaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagc 112  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||| ||||| ||||||| ||||| ||||||||    
T  33981214 aaaacttatgaaaacggcttatgacacatttcataagcttttttcaacttaatttcataaattctccaagatagc 33981140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 41812072 - 41812181
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaa 139  Q
    ||||| |||||||||||||||||| ||||||||||| ||||||| ||| | ||| |||||| || |||||||||| | ||||  ||| ||||| ||||||    
T  41812072 aacttttgaaaacagcttatgacatttttcataagcttttttcaactt-atttcctaagttttccaagatagcttttgaaacatcttgtagcatatacaa 41812170  T
Q  140 aaacaatttaa 150  Q
    |||||||||||    
T  41812171 aaacaatttaa 41812181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 15757641 - 15757750
Alignment:
Q  43 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaa-accacttatagcaaatac-aaa 140  Q
    |||||||||| |||||||||| |||||| |||| ||||||||||||  |||||| |||||||   |||||||||||| || |||||||||| |||| |||    
T  15757641 ttatgaaaactgcttatgacaattttcagaagcttttttcagcttattttcatacgttctcttgtatagcttataaatacaacttatagcatatacaaaa 15757740  T
Q  141 aacaatttaa 150  Q
    ||||||||||    
T  15757741 aacaatttaa 15757750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 26202141 - 26202025
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||| ||||| | | || |||||| |||| ||||||||| ||||||||||| ||||||| ||||  ||||||||||||| || ||| |||||    
T  26202141 agttttgtgagattctttgctagaatttatgagaacaacttatgacaattttcataagcttttttcaacttattttcataagttctccaatatatcttat 26202042  T
Q  117 -aaaaccacttatagca 132  Q
     ||||| ||||||||||    
T  26202041 aaaaacaacttatagca 26202025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 12464461 - 12464564
Alignment:
Q  48 aaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaat 146  Q
    |||| |||||| ||||  ||||| |||| ||||||||||||  |||| |||||||| |||||||||||| ||||   ||||||||| |||||||||||||    
T  12464461 aaaaaagcttacgacatatttcacaagcttttttcagcttattttcacaagttctccaagatagcttatgaaaatagcttatagcatatacaaaaacaat 12464560  T
Q  147 ttaa 150  Q
    ||||    
T  12464561 ttaa 12464564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 18066218 - 18066107
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||||||||||||||||||||| |  ||||||||  |||||| ||||  ||| ||||||||| |||||||||||| |||||  ||||||||  |||      
T  18066218 aacttatgaaaacagcttatgacattgctcataagctattttcaccttattttcttaagttctccaagatagcttatgaaaacagcttatagcttatatg 18066119  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  18066118 aaaacaatttaa 18066107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 32592676 - 32592566
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||||||||| |||||| |||| ||||||||||| ||| ||| ||||  ||||||||||||| || || |||||| ||||| |||||||||  ||||     
T  32592676 aacttatgaaaatagcttacgacaattttcataagcttttctcaacttattttcataagttctccaatattgcttataaaaacaacttatagcgtatac- 32592578  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  32592577 aaaacaatttaa 32592566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 39659489 - 39659600
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||| |||||||||||||||||  |||  ||||| ||| ||| ||||  |||||||||||||||| ||||||||| ||||| | ||||| || | |||    
T  39659489 aacttacgaaaacagcttatgacaaattttctaagcttttgtcaccttatcttcataagttctctaatatagcttataaaaacaagttataacatagaca 39659588  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  39659589 aaaacaatttaa 39659600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 150
Target Start/End: Original strand, 41241136 - 41241223
Alignment:
Q  64 cttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
    |||| ||||||| ||||||||||||| |||| ||||| || |||||| ||||  ||||| |||||||||| |||||||||||||||||    
T  41241136 ctttccataagcttttttcagcttaatttcacaagttttccaagataacttaggaaaactacttatagcatatacaaaaacaatttaa 41241223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 41293120 - 41293219
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||| |||  || ||||||| |||||||||||||||| ||  |||||||  ||||||||||| |||||||||| ||| | ||||||||||    
T  41293120 agttttgtgagactatttgggagaacttataaaaacagcttatgacatttcgcataagctgttttcagcttatattcataagtactccaggatagcttat 41293219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 147
Target Start/End: Original strand, 5745768 - 5745873
Alignment:
Q  43 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata-aaaccacttatagcaaatacaaaa 141  Q
    ||||||||||||||||||||| ||||||||||| |||| || || |  ||| ||||| ||| || |||||||||| |||  |||||||||| ||| ||||    
T  5745768 ttatgaaaacagcttatgacaattttcataagctttttccaactaattttcctaagtcctcaaatatagcttatagaaataacttatagcatataaaaaa 5745867  T
Q  142 acaatt 147  Q
    ||||||    
T  5745868 acaatt 5745873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 1625990 - 1625879
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||||||||  ||||||||||| | ||||||||   ||||||||| |  ||| ||||||||| |||||||||||| ||||| ||||||| |  ||||     
T  1625990 aacttatgaaagtagcttatgacaatgttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaacaacttataacttatacg 1625891  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  1625890 aaaacaatttaa 1625879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 7035524 - 7035627
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||| ||||  | |||||||| ||||||||||||||||  ||||||||   ||||| |||||  |||||||||| || ||||||| ||||    
T  7035524 agttttgtgagactgttttgaagaacttatggaaacagcttatgacacagttcataaggtgttttccgcttattttcataagttttccaagatagtttat 7035623  T
Q  117 aaaa 120  Q
    ||||    
T  7035624 aaaa 7035627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 20952445 - 20952342
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    ||||||||||||||| ||||| || ||||||| | | ||||||| ||||  ||||||||||||| || |||||| || ||||| |||||||||| ||| |    
T  20952445 aacttatgaaaacagtttatgccaattttcattaacttttttcaacttattttcataagttctccaatatagctaataaaaacaacttatagcatataaa 20952346  T
Q  139 aaaa 142  Q
    ||||    
T  20952345 aaaa 20952342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 750760 - 750679
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaac 121  Q
    |||||||||||| |||| |||||| | |||||||||  |||| ||||||  | ||||||||||| |||||||||||| ||||    
T  750760 aacttatgaaaagagctaatgacattgttcataagctgttttgagcttatttgcataagttctccaagatagcttatgaaac 750679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 9174897 - 9174808
Alignment:
Q  48 aaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaata 136  Q
    |||||| ||||||||| | |||||||||  |||||||||||  |||||||| ||| ||||||||||||| |||||  ||||||| |||||    
T  9174897 aaaacaacttatgacattgttcataagctattttcagcttattttcataagctctgtaagatagcttatgaaaacagcttatagtaaata 9174808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 20926577 - 20926516
Alignment:
Q  56 ttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 117  Q
    |||||||| ||||||| ||| ||||||| ||||  |||||||||||||||| ||||||||||    
T  20926577 ttatgacaattttcattagcttttttcaacttattttcataagttctctaatatagcttata 20926516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 40279285 - 40279176
Alignment:
Q  42 cttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaa 140  Q
    |||||||||||| |||||| || | ||||||| |  ||||||||| |  ||||||||||||| || ||||||||| ||||| ||||||| |  |||| ||    
T  40279285 cttatgaaaacaacttatggcattgttcataaactattttcagctaattttcataagttctccaacatagcttatgaaaacaacttatatcttataccaa 40279186  T
Q  141 aacaatttaa 150  Q
    ||||||||||    
T  40279185 aacaatttaa 40279176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 13325660 - 13325596
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctct 104  Q
    ||||| |||||||||||||||||| ||  ||||||| |||||||||| |  ||||||||||||||    
T  13325660 aacttttgaaaacagcttatgacatttcacataagcttttttcagctcattttcataagttctct 13325596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 4607038 - 4606939
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||| |||  || ||||| |||||||| ||||||||| | ||||| |||   ||| ||||||  ||||||||||||| ||||||||||||    
T  4607038 agttttgtgagactatttgggagaacttgtgaaaacaacttatgacattgttcatgagctgcttttagcttattttcataagttctccaagatagcttat 4606939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 16451208 - 16451133
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta 115  Q
    |||||||||||||| ||||||||| | ||||| |||  |||||||||||  ||||  ||||||| |||||||||||    
T  16451208 aacttatgaaaacaacttatgacattgttcatgagctgttttcagcttattttcacgagttctccaagatagctta 16451133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 26626963 - 26626852
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||| ||||| ||||||||||| | ||||||| |  ||||||| |||  ||||||||||||  |||||||||||| |||||  ||| ||||  ||||     
T  26626963 aacttacgaaaatagcttatgacattgttcataatctgttttcaggttattttcataagttctgcaagatagcttatgaaaacagcttctagcttatacg 26626864  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  26626863 aaaacaatttaa 26626852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 33192291 - 33192209
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca 123  Q
    ||||||||||||||| |||||||| | | |||||||  ||||||||||| ||| ||||| |||| | |||||||||| ||||||    
T  33192291 aacttatgaaaacagtttatgaca-tatccataagctgttttcagcttatatttataagctctccaggatagcttatgaaacca 33192209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 33319807 - 33319903
Alignment:
Q  53 agcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
    |||||||||||  ||| |||||| ||||||||||||  ||||||||||||| ||||||| |||| |||||   |||||| | ||||||||||| |||||    
T  33319807 agcttatgaca--tttaataagcttttttcagcttattttcataagttctccaagatagtttatgaaaacagtttatagtatatacaaaaacagtttaa 33319903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 2227248 - 2227194
Alignment:
Q  48 aaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttct 102  Q
    |||||||||||||||| ||||||||| | ||||||||||||  ||| ||||||||    
T  2227248 aaaacagcttatgacatttttcataaacatttttcagcttattttcgtaagttct 2227194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 19608591 - 19608661
Alignment:
Q  18 gttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagctta 88  Q
    ||||||||||||| ||| ||| ||||||| || ||||||||||||| | |||||||||  |||| ||||||    
T  19608591 gttttatgagactgtttgcgagaacttataaacacagcttatgacattcttcataagctattttgagctta 19608661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 43570503 - 43570446
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 98  Q
    |||||||||||||||||||||||| | |||||||| |||||| ||||||  ||||||||    
T  43570503 aacttatgaaaacagcttatgacattgttcataag-cttttttagcttattttcataag 43570446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 1647325 - 1647249
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 117  Q
    |||||||||||||||||||||||| |  ||||||||  |||||||||||  | |||||| ||||||  ||||||||||    
T  1647325 aacttatgaaaacagcttatgaca-tgctcataagctgttttcagcttatttccataagctctctataatagcttata 1647249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 7928278 - 7928351
Alignment:
Q  40 aacttatgaaaacagcttatg-acacttttcataagcctttttcagcttaaattcataagttctctaagatagc 112  Q
    ||||| ||||||||||||||| ||| | ||||||||   |||||||||||  ||||||||||||| ||||||||    
T  7928278 aacttttgaaaacagcttatggacattgttcataagttgttttcagcttattttcataagttctccaagatagc 7928351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 12289879 - 12289774
Alignment:
Q  48 aaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaata-caaaaacaa 145  Q
    ||||||| |||||||| | ||||||||| ||||||| ||||  ||||||||||||| || |||  |||| ||||| ||||||| ||  || |||||||||    
T  12289879 aaaacagtttatgacaatattcataagcttttttcaacttattttcataagttctccaatataaattataaaaacaacttataacatgtaccaaaaacaa 12289780  T
Q  146 tttaat 151  Q
    ||||||    
T  12289779 tttaat 12289774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 31561719 - 31561792
Alignment:
Q  37 gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagata 110  Q
    |||||||| |||||||||| ||||||  ||||||||||  | ||| ||||||  ||||||||||||| ||||||    
T  31561719 gaaaacttttgaaaacagcatatgacgtttttcataagattgtttaagcttactttcataagttctccaagata 31561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 36043996 - 36043924
Alignment:
Q  38 aaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagata 110  Q
    |||||||||||||||| |||| |||| | |||||||||  |||| |||| || |||||||| |||| ||||||    
T  36043996 aaaacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctctccaagata 36043924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 39073684 - 39073780
Alignment:
Q  55 cttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacc-acttatagcaaatacaaaaacaatttaa 150  Q
    ||||||||| ||||||||||  |  |||| ||||  ||||  ||||||| || |||||||||||||   |||||||||| |||||||||||||||||    
T  39073684 cttatgacaattttcataagtttcgttcaacttattttcactagttctccaatatagcttataaaaattacttatagcatatacaaaaacaatttaa 39073780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 41407392 - 41407280
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatac- 137  Q
    ||||||| ||||| ||||||| || ||||||||||| | ||| || |||  |||| |||||||| |||| | ||||| ||||  |||||||||| ||||     
T  41407392 aacttattaaaacggcttatggcatttttcataagcttgtttaaggttattttcacaagttctcaaagaaaacttataaaaataacttatagcatataca 41407293  T
Q  138 aaaaacaatttaa 150  Q
    |||||||||||||    
T  41407292 aaaaacaatttaa 41407280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 3e-25; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 16937863 - 16937974
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    ||||||||||||||||||||||||  |||||||||| ||||||||||||  ||| ||||||||| || ||||| ||| ||||| |||||||||| |||||    
T  16937863 aacttatgaaaacagcttatgacaaatttcataagcttttttcagcttattttcctaagttctccaatatagcgtataaaaacaacttatagcatataca 16937962  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  16937963 aaaacaatttaa 16937974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 16457936 - 16458070
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||| |||  || |||||||||||||||||||||||| |||||||||||  ||||||| |||  |||| |||||||| ||  ||||| ||    
T  16457936 agttttgtgagactgtttgggagaacttatgaaaacagcttatgacagttttcataagctcttttcagtttattttcacaagttctccaatttagctcat 16458035  T
Q  117 -aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
     ||||| |||||||||| |||||||||||||||||    
T  16458036 aaaaacaacttatagcatatacaaaaacaatttaa 16458070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 39105578 - 39105443
Alignment:
Q  17 agttttatgagactcttttcgaa-aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta 115  Q
    |||||||||||||| |||| | | || ||||||||||||||||||||| | |||||||||  |||| ||||||  ||||||||||||| |||||||||||    
T  39105578 agttttatgagacttttttgggagaatttatgaaaacagcttatgacattgttcataagctatttttagcttattttcataagttctccaagatagctta 39105479  T
Q  116 t-aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
    | |||||   |||||||  |||| ||||||||||||    
T  39105478 tgaaaacagattatagcttatacgaaaacaatttaa 39105443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 10640043 - 10639931
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||||||||||||||||||||| ||||||||||| ||||  ||||||  ||||||||||||| || |||| ||||  |||| ||| ||  || |||||    
T  10640043 aacttatgaaaacagcttatgacatttttcataagctttttctagcttattttcataagttctccaaaatagtttatgtaaacaactcatcacatataca 10639944  T
Q  139 aaaacaatttaat 151  Q
    |||||||||||||    
T  10639943 aaaacaatttaat 10639931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 12857685 - 12857765
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 120  Q
    |||||||||||||| ||||||||| |||||| || | ||||||||||||  ||||||||||||| || |||||||||||||    
T  12857685 aacttatgaaaacaacttatgacaattttcacaaccttttttcagcttattttcataagttctccaatatagcttataaaa 12857765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 42 - 149
Target Start/End: Complemental strand, 40426853 - 40426745
Alignment:
Q  42 cttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta-taaaaccacttatagcaaatacaaa 140  Q
    ||||||||||||||||||| || ||||||||||| ||||| ||||||  ||| ||||||||| |||| ||||||   ||||  |||| ||||||||||||    
T  40426853 cttatgaaaacagcttatgccatttttcataagcttttttaagcttattttcgtaagttctccaagacagcttacggaaacagcttacagcaaatacaaa 40426754  T
Q  141 aacaattta 149  Q
    |||||||||    
T  40426753 aacaattta 40426745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 29925931 - 29925820
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||||||||||||||||||||| | |||||  |  ||||||| ||||  ||||||||||||| || |||||||||  |||| |||||||||| |||||    
T  29925931 aacttatgaaaacagcttatgacaatgttcatgtgtttttttcaacttattttcataagttctccaatatagcttatgtaaacaacttatagcacataca 29925832  T
Q  139 aaaacaatttaa 150  Q
     |||||||||||    
T  29925831 gaaacaatttaa 29925820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 3735138 - 3735202
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctct 104  Q
    |||| ||||||||||||||||||| |||||| |||| ||||||||||||  ||||||||||||||    
T  3735138 aactgatgaaaacagcttatgacaattttcaaaagcttttttcagcttatcttcataagttctct 3735202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 12857318 - 12857398
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 120  Q
    |||||||||||||| ||||||||| |||||| |||| ||||||||||||  ||  ||||||||| || |||||||||||||    
T  12857318 aacttatgaaaacaacttatgacaattttcacaagcttttttcagcttatttttgtaagttctccaatatagcttataaaa 12857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 32009806 - 32009674
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcat-aagcctttttcagcttaaattcataagttctctaagatagctta 115  Q
    |||||| ||||||| |||   |||||||||||||||||||| ||||| ||||||| |||| ||||| | |||   ||||||||||||| || ||||||||    
T  32009806 agttttgtgagactatttggaaaaacttatgaaaacagcttgtgacaattttcataaagcttttttgaacttgttttcataagttctccaatatagctta 32009707  T
Q  116 t-aaaaccacttatagcaaatacaaaaacaatt 147  Q
    | ||||| | |||||||| |||||| |||||||    
T  32009706 taaaaacaatttatagcatatacaagaacaatt 32009674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 43300991 - 43300865
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta- 115  Q
    |||||||||||||| ||   || || |||| |||||||| ||||||| |||  |||||| | ||||||||||  ||||||||||||| |||||||||||     
T  43300991 agttttatgagactgttggggagaagttataaaaacagcctatgacattttatataagcatgtttcagcttattttcataagttctccaagatagcttac 43300892  T
Q  116 taaaaccacttatagcaaatacaaaaa 142  Q
     ||||| |||||||| | |||||||||    
T  43300891 aaaaacaacttataggatatacaaaaa 43300865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 37954773 - 37954696
Alignment:
Q  43 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 120  Q
    ||||||||||||||||||| | ||||||| ||| ||||||| ||||  |||||| |||||| || |||||||||||||    
T  37954773 ttatgaaaacagcttatgaaaattttcattagcttttttcaacttattttcatatgttctccaatatagcttataaaa 37954696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 42500200 - 42500298
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| |||||||||||  || |||||||| ||||| |||| |||| ||||||||||| ||||||| ||||  ||||||||||||| || |||||||||    
T  42500200 agttttgtgagactctttg-gagaacttatggaaacaacttacgacaattttcataagc-tttttcaacttattttcataagttctccaatatagcttat 42500297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 1465000 - 1465091
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagc 131  Q
    ||||||||||||||||||||| || |  |||||||   |||||||||||  |||| |||| ||| ||||||||||||||||  |||||||||    
T  1465000 aacttatgaaaacagcttatggcattgctcataagttgttttcagcttattttcacaagtcctccaagatagcttataaaataacttatagc 1465091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 25461169 - 25461074
Alignment:
Q  52 cagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaat 146  Q
    ||||||||| || ||||||||| | ||||||||||||  ||||| ||||||| || | ||||||| ||||| ||||||| || |||||||||||||    
T  25461169 cagcttatggcaattttcataaacgtttttcagcttattttcatcagttctccaatagagcttatgaaaacaacttataacatatacaaaaacaat 25461074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 2568747 - 2568636
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatac- 137  Q
    |||||||||||||||||||||||| | ||||||||   |||| ||||||  ||||| || |||| | |||||||||| ||||| |||||||||  ||||     
T  2568747 aacttatgaaaacagcttatgaca-tattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaacttatagcttatacg 2568649  T
Q  138 aaaaacaatttaa 150  Q
    |||||||||||||    
T  2568648 aaaaacaatttaa 2568636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 7705978 - 7706054
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||||||||||||||||||||| ||||||   || |||||| |||||  |||| |||||||| || |||||||||    
T  7705978 aacttatgaaaacagcttatgacagttttcacctgcttttttcggcttattttcacaagttctccaatatagcttat 7706054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 34669709 - 34669773
Alignment:
Q  40 aacttatgaaaac-agcttatgacacttttcataagcctttttcagcttaaattcataagttctc 103  Q
    ||||||||||||| | || |||||| ||||||||||| ||||||||||||| |||| ||||||||    
T  34669709 aacttatgaaaactaactaatgacatttttcataagcttttttcagcttaatttcagaagttctc 34669773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 35446138 - 35446082
Alignment:
Q  47 gaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctc 103  Q
    |||||||| |||||||| ||||| ||||| ||||||||||||  |||||||||||||    
T  35446138 gaaaacagtttatgacatttttcgtaagcttttttcagcttattttcataagttctc 35446082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 9202725 - 9202804
Alignment:
Q  37 gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    ||||||| ||| ||||||||||||||| | |||||||||  ||| |||||||  ||||||||||||  |||||| |||||    
T  9202725 gaaaactaatggaaacagcttatgacattgttcataagctgtttccagcttattttcataagttcttcaagataacttat 9202804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 4014426 - 4014480
Alignment:
Q  62 cacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||| |||||||||  |||||||||||  ||||||||||||| ||||||||||||    
T  4014426 cactgttcataagctgttttcagcttattttcataagttctccaagatagcttat 4014480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 7985057 - 7984983
Alignment:
Q  42 cttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||| ||||||||||| ||||  | |||||||||  |||||||||||  ||||||| ||||| ||||||||||||    
T  7985057 cttaagaaaacagcttgtgacgttgttcataagctgttttcagcttattttcataaattctccaagatagcttat 7984983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 39477967 - 39477893
Alignment:
Q  46 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 120  Q
    |||| |||||| |||||| |||||| |||  |||||| |||||  |||| ||||||||||| |||||||||||||    
T  39477967 tgaacacagctgatgacaattttcaaaagtttttttctgcttattttcagaagttctctaacatagcttataaaa 39477893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 2973524 - 2973557
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataa 73  Q
    |||||||||||||||||||||||| |||||||||    
T  2973524 aacttatgaaaacagcttatgacaattttcataa 2973557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 3280696 - 3280771
Alignment:
Q  41 acttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat-aagttctctaagatagcttat 116  Q
    ||||||||||||||||||||||| | |||||||||  |||| || |||  ||||| |||||||| ||||||||||||    
T  3280696 acttatgaaaacagcttatgaca-tcttcataagctctttttagtttattttcataaagttctcaaagatagcttat 3280771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 13697764 - 13697828
Alignment:
Q  65 ttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttata 129  Q
    ||||||||||  ||||||| ||||  ||||||| ||||| || |||||||||||||| |||||||    
T  13697764 ttttcataagtttttttcaacttattttcataacttctccaacatagcttataaaacaacttata 13697828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 31038397 - 31038333
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt 81  Q
    |||||| ||| ||| |||| || ||||||| |||| ||||||||||| ||||||||||| |||||    
T  31038397 agttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataagctttttt 31038333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 31047621 - 31047557
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt 81  Q
    |||||| ||| ||| |||| || ||||||| |||| ||||||||||| ||||||||||| |||||    
T  31047621 agttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataagctttttt 31047557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 32859703 - 32859762
Alignment:
Q  43 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctc 103  Q
    ||||||||||| |||| |||| |||||||||| |||||||||||||  ||||||| |||||    
T  32859703 ttatgaaaacaacttacgacatttttcataag-ctttttcagcttattttcataacttctc 32859762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 32861875 - 32861934
Alignment:
Q  43 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctc 103  Q
    ||||||||||| |||| |||| |||||||||| |||||||||||||  ||||||| |||||    
T  32861875 ttatgaaaacaacttacgacatttttcataag-ctttttcagcttattttcataacttctc 32861934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 42646757 - 42646685
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagc 112  Q
    |||||||||||| || ||| |||| ||||||||||| ||||| || |||  | ||||||||||| ||||||||    
T  42646757 aacttatgaaaaaagtttaggacatttttcataagctttttttagtttatttccataagttctcgaagatagc 42646685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 3e-25; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 17822849 - 17822956
Alignment:
Q  44 tatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaa 142  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||||  ||||||||||||| |||||||||||| ||||| |||||||||| ||| || ||    
T  17822849 tatgaaaacagcttatgacatttttcataagctttttttagcttattttcataagttctccaagatagcttatgaaaacaacttatagcatataaaataa 17822948  T
Q  143 caatttaa 150  Q
    ||||||||    
T  17822949 caatttaa 17822956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 50681046 - 50681180
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||| |||  || ||||||||||||||| | |||||| ||||||||||| |||||||  |||  ||||||| ||||| || |||||||||    
T  50681046 agttttgtgagactgtttgagagaacttatgaaaacagttaatgacaattttcataagcttttttcaatttattttcataatttctccaatatagcttat 50681145  T
Q  117 a-aaaccacttatagcaaatacaaaaacaatttaa 150  Q
    | |||| |||||||||| |||||||||||||||||    
T  50681146 ataaacaacttatagcatatacaaaaacaatttaa 50681180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 30668325 - 30668426
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||| |||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||  | || ||||||||||||    
T  30668325 agttttttgagact-ttttggagaacttgtgaaaacagcttatgacacttttcataag-ctttttcagcttaatttcataaactatccaagatagcttat 30668422  T
Q  117 aaaa 120  Q
    ||||    
T  30668423 aaaa 30668426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 50662695 - 50662818
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    ||||||||||||||||||  || ||||||||||||||| | |||||| ||||||||||| ||||||| ||||  |||| || ||||| || |||||||||    
T  50662695 agttttatgagactctttaagagaacttatgaaaacagttaatgacaattttcataagcttttttcaacttattttcacaatttctccaatatagcttat 50662794  T
Q  117 a-aaaccacttatagcaaatacaa 139  Q
    | |||| |||||||||| ||||||    
T  50662795 ataaacaacttatagcatatacaa 50662818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 21731636 - 21731742
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||||||||||||||||| ||| ||||||||| | ||||||| ||||  ||||||| ||||| || ||||||||| ||||| |||||||||| |||||    
T  21731636 aacttatgaaaacagcttatcacaattttcataaacttttttcaacttactttcataaattctccaatatagcttataaaaacaacttatagcacataca 21731735  T
Q  139 aaaacaa 145  Q
    |||||||    
T  21731736 aaaacaa 21731742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 29657474 - 29657393
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaac 121  Q
    |||||||||||||||||||||||| |||||| |||| ||||| ||||||| ||||||| |||||||| ||||||| ||||||    
T  29657474 aacttatgaaaacagcttatgacaattttcaaaagcatttttgagcttaatttcataacttctctaatatagcttgtaaaac 29657393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 13126556 - 13126630
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctt 114  Q
    ||||||| |||||||||||||||| || |||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  13126556 aacttataaaaacagcttatgacatttatcataagcttttttcagcttattttcataagttctcgaagatagctt 13126630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 46 - 142
Target Start/End: Original strand, 55414406 - 55414503
Alignment:
Q  46 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaa 142  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||  ||||||||||||| |||||| ||||| ||||| | |||||||| || ||||||    
T  55414406 tgaaaacagcttatgacatttttcataagcttttttcaacttattttcataagttctccaagataacttatgaaaacaatttatagcatatgcaaaaa 55414503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 22030293 - 22030190
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataa-aaccacttatagcaaataca 138  Q
    |||||||||||||||||||||||| |||||| |||| ||| |||| |||  ||||||||||||||||  || ||| ||| ||| |||||||||| |||||    
T  22030293 aacttatgaaaacagcttatgacaattttcaaaagcttttctcaggttattttcataagttctctaatttaacttgtaagaacaacttatagcatataca 22030194  T
Q  139 aaaa 142  Q
    ||||    
T  22030193 aaaa 22030190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 43 - 148
Target Start/End: Original strand, 7839344 - 7839450
Alignment:
Q  43 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaa 141  Q
    ||||||||||| ||||||||| ||||||||||| ||||||| ||||  ||| ||||||||  ||  |||||||| ||||| | |||||||| ||||||||    
T  7839344 ttatgaaaacaacttatgacaattttcataagcttttttcaacttattttcgtaagttcttcaatctagcttataaaaacaatttatagcatatacaaaa 7839443  T
Q  142 acaattt 148  Q
    |||||||    
T  7839444 acaattt 7839450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 150
Target Start/End: Original strand, 53294091 - 53294205
Alignment:
Q  37 gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaat 135  Q
    ||||||| |||||||||  ||||||   |||||| ||||  ||||||||||   |||||||||||||||| |||| |||| ||||| |||||||||| ||    
T  53294091 gaaaactcatgaaaacaaattatgatggttttcaaaagctattttcagcttgttttcataagttctctaatatagtttataaaaacaacttatagcatat 53294190  T
Q  136 acaaaaacaatttaa 150  Q
    |||||||||||||||    
T  53294191 acaaaaacaatttaa 53294205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 54426133 - 54426053
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 120  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||  |||  ||||||||||||| || |||| ||||||||    
T  54426133 aacttaggaaaacagcttatgacaattttcataagcttttttcaagttattttcataagttctccaatatagattataaaa 54426053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 145
Target Start/End: Complemental strand, 2244133 - 2244032
Alignment:
Q  48 aaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta---taaaaccacttatagca-aatacaaaaac 143  Q
    |||||||||||||||| | ||||||| | ||||||| ||||  ||||||||||||| || ||||||||   |||||| |||||||||| |||||||||||    
T  2244133 aaaacagcttatgacaatattcataaacttttttcaccttattttcataagttctccaatatagcttatattaaaacaacttatagcataatacaaaaac 2244034  T
Q  144 aa 145  Q
    ||    
T  2244033 aa 2244032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 25904205 - 25904280
Alignment:
Q  42 cttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 117  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||  || |||||||||| || | ||||||||    
T  25904205 cttatgaaaacagcttatgccatttttcataagcttttttcagcttatttttataagttctccaaaacagcttata 25904280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 55302342 - 55302263
Alignment:
Q  37 gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    ||||||||||  ||||||||||||||| ||||| ||||| ||||||||||||  |||||||||| || || |||||||||    
T  55302342 gaaaacttatagaaacagcttatgacaattttcgtaagcttttttcagcttattttcataagttttccaacatagcttat 55302263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 26831 - 26924
Alignment:
Q  26 agactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 120  Q
    ||||| ||| ||| || |||||||||||||||||||||  ||||| |||| |||||||| |||  ||||||||||||| || |||||||||||||    
T  26831 agactgtttccgagaaattatgaaaacagcttatgacaaatttcacaagc-tttttcagattattttcataagttctccaatatagcttataaaa 26924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 46588053 - 46588157
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat--aaaaccacttatagcaaatac 137  Q
    |||||| ||||| | ||||||||| |||||||||||||||| || ||||  ||||||||||||| || ||| |||||  ||||| |||||||||| |||     
T  46588053 aacttacgaaaataacttatgacaattttcataagccttttccaacttattttcataagttctccaatataacttataaaaaacaacttatagcatatat 46588152  T
Q  138 aaaaa 142  Q
    |||||    
T  46588153 aaaaa 46588157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 16199991 - 16200066
Alignment:
Q  70 ataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaaca 144  Q
    |||||||||||| ||||||  ||||||||| ||| |||||||||||| |||||  ||||||||| |||||||||||    
T  16199991 ataagccttttttagcttattttcataagtcctccaagatagcttatgaaaacagcttatagcatatacaaaaaca 16200066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 39603127 - 39603230
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||| |||  || |||||| ||||||||||||||||| |||| |||||| ||||| |  |||  ||||||||||||| || ||| |||||    
T  39603127 agttttgtgagactgtttgggagaacttaggaaaacagcttatgacaatttttataagctttttttaagttattttcataagttctccaatataccttat 39603226  T
Q  117 aaaa 120  Q
    ||||    
T  39603227 aaaa 39603230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 24169376 - 24169279
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctt 114  Q
    |||||| ||||||| |||  || ||||| | |||| ||||||||||| ||||||||||  ||||||| ||||  |||||||| |||| ||||||||||    
T  24169376 agttttgtgagactatttgagagaacttttaaaaatagcttatgacatttttcataagattttttcaacttattttcataagctctccaagatagctt 24169279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 147
Target Start/End: Complemental strand, 41512730 - 41512633
Alignment:
Q  51 acagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatt 147  Q
    ||||||||| ||||||||||||||| ||| ||| ||||  ||||||||||||   ||| ||||||| ||||| |||||||||| |  |||||||||||    
T  41512730 acagcttataacacttttcataagcttttatcatcttattttcataagttcttccagaaagcttatgaaaacaacttatagcatacgcaaaaacaatt 41512633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 46592204 - 46592269
Alignment:
Q  55 cttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 120  Q
    ||||||||| |||||||||||||||| || ||||  ||||||||||||| || ||| |||||||||    
T  46592204 cttatgacaattttcataagccttttccaacttattttcataagttctccaatataacttataaaa 46592269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 21523644 - 21523585
Alignment:
Q  43 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctc 103  Q
    ||||||||||| ||||||||| |||||||||| |||||||||||||  ||||||| |||||    
T  21523644 ttatgaaaacaacttatgacatttttcataag-ctttttcagcttattttcataacttctc 21523585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 41336850 - 41336802
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagctta 88  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||| ||||    
T  41336850 aacttaagaaaacagcttatgacagttttcataagcttttttcaactta 41336802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 2996660 - 2996554
Alignment:
Q  42 cttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaa 140  Q
    |||||||||||| ||||||||| | | ||||||| ||||||| ||||  |||||| | |||| |||||||||||| ||||| ||||||| |  ||| |||    
T  2996660 cttatgaaaacaacttatgaca-tgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttataacttatataaa 2996562  T
Q  141 aacaattt 148  Q
    ||||||||    
T  2996561 aacaattt 2996554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 25332888 - 25332753
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttct-ctaagatagctta 115  Q
    |||||| ||||||| |||  || |||||  ||||||| |||||| || | ||||||||   |||||||||||  ||||||||||||  ||||||||||||    
T  25332888 agttttgtgagactatttgggagaacttgcgaaaacaacttatggcattattcataagttgttttcagcttattttcataagttctgataagatagctta 25332789  T
Q  116 taaaacca-cttatagcaaatacaaaaacaatttaa 150  Q
    |||||  | |||| |||  |||||||||||||||||    
T  25332788 taaaaatagcttagagcttatacaaaaacaatttaa 25332753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 35571619 - 35571718
Alignment:
Q  48 aaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaat 146  Q
    |||||||||||| ||||| ||||| |||   ||||| ||||  |||| ||||||||||||||||||||| |||||  ||||||||  |||| ||||||||    
T  35571619 aaaacagcttattacactgttcatgagctggtttcaacttattttcacaagttctctaagatagcttatgaaaacagcttatagcttatacgaaaacaat 35571718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 1408040 - 1407970
Alignment:
Q  47 gaaaacagcttatgacacttttcataagc-ctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    ||||||||||||||||| |||||||||||  ||||||||||||  ||||||| || ||  |||||||||||    
T  1408040 gaaaacagcttatgacatttttcataagctgtttttcagcttatcttcataaattttcctagatagcttat 1407970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 37863935 - 37864043
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaa 139  Q
    |||||||||||||||||||||||||  ||||||||   |||||| ||| |||||||||  || | |||||||||||| ||||  |||||| |  | ||||    
T  37863935 aacttatgaaaacagcttatgacac-gttcataagttgttttcacctt-aattcataacctcaccaagatagcttatgaaacagcttatatcttaaacaa 37864032  T
Q  140 aaacaatttaa 150  Q
    |||||||||||    
T  37864033 aaacaatttaa 37864043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 55064925 - 55064855
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagata 110  Q
    ||||| |||||||| ||||||||| ||||||  ||| ||||||| ||||  ||||||||||||| ||||||    
T  55064925 aacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcataagttctccaagata 55064855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 54069403 - 54069508
Alignment:
Q  46 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccac-ttatagcaaatacaaaaaca 144  Q
    |||||||||||||  ||| |||||||||||  |||| | ||||  |||||| |||||  || ||| ||||||||| ||  |||||||| |||||||||||    
T  54069403 tgaaaacagcttacaacaattttcataagctgtttttaacttattttcatatgttcttcaatataacttataaaaacaaattatagcatatacaaaaaca 54069502  T
Q  145 atttaa 150  Q
    ||||||    
T  54069503 atttaa 54069508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 15177233 - 15177293
Alignment:
Q  91 ttcataagttctctaagatagcttataaaa-ccacttatagcaaatacaaaaacaatttaa 150  Q
    ||||| |||||||||  ||||||||||||| |||||||||||| ||| || ||||||||||    
T  15177233 ttcattagttctctagtatagcttataaaaaccacttatagcacatagaagaacaatttaa 15177293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 20109675 - 20109611
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctct 104  Q
    ||||| |||||||||||||||||| ||||||||||  |||||| ||| |  || |||||||||||    
T  20109675 aacttttgaaaacagcttatgacatttttcataagtttttttctgctgatttttataagttctct 20109611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 43886112 - 43886159
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagctta 88  Q
    ||||||||||||||||||||| || |||||||||||  |||||||||||    
T  43886112 aacttatgaaaacagcttatggca-ttttcataagctattttcagctta 43886159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 49939931 - 49939979
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagctta 88  Q
    |||||||||||| ||||||||||| | |||||||||  |||||||||||    
T  49939931 aacttatgaaaagagcttatgacattgttcataagctgttttcagctta 49939979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 56249613 - 56249566
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagctta 88  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||| ||||    
T  56249613 aacttatcaaaacagcttatgaca-ttttcataagcttttttcaactta 56249566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 7e-23; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 49938837 - 49938734
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||||||||||||||||||||| |||||| |||| ||||||| ||||  |||||||||||||||| ||||||||| ||||| ||||||| || |||||    
T  49938837 aacttatgaaaacagcttatgacaattttcaaaagcttttttcaacttattttcataagttctctaatatagcttataaaaacaacttataacatataca 49938738  T
Q  139 aaaa 142  Q
    ||||    
T  49938737 aaaa 49938734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 15477655 - 15477578
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 117  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||| ||||||||||||||||| ||| ||||||    
T  15477655 aacttatgaaaacagcttatgacaattttcaaaagcttttttcagcttatattcataagttctctaatataacttata 15477578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 24915034 - 24915142
Alignment:
Q  43 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaa 141  Q
    ||||||||||| ||||||||| ||||||||||| ||||||| ||||  |||| |||||||| |||| ||||||| |||||  ||||||||| ||||||||    
T  24915034 ttatgaaaacaacttatgacatttttcataagcttttttcaacttattttcacaagttctccaagacagcttatgaaaacagcttatagcatatacaaaa 24915133  T
Q  142 acaatttaa 150  Q
    |||||||||    
T  24915134 acaatttaa 24915142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 3233995 - 3234106
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||||||||||| ||||| ||| ||||||||||  ||||||  ||||  ||||||||||||| || ||||||||| ||||| |||||||||| |||||    
T  3233995 aacttatgaaaacaacttataacagttttcataagtttttttctacttattttcataagttctccaatatagcttataaaaacaacttatagcatataca 3234094  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  3234095 aaaacaatttaa 3234106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 14576634 - 14576744
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    ||||| |||||||||||||||||| |||||| |||| ||||||||||||  |||| ||||||||||| ||||||||| ||||  | |||||||| |||||    
T  14576634 aacttgtgaaaacagcttatgacaattttcaaaagcttttttcagcttattttca-aagttctctaatatagcttataaaaaaaaattatagcatataca 14576732  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  14576733 aaaacaatttaa 14576744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 17603364 - 17603475
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||| ||||||||||||||||| ||||||||| | |||| || ||||  |||| |||||||| || ||||||||| ||||| |||||||||| |||||    
T  17603364 aacttacgaaaacagcttatgacaattttcataaactttttacaacttattttcagaagttctccaatatagcttataaaaacaacttatagcatataca 17603463  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  17603464 aaaacaatttaa 17603475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 13810111 - 13809977
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| |||||||||||| || |||||||||| |||| |||||||| |||||| |||  ||| | ||||||  |||| ||||||||||| |||| ||||    
T  13810111 agttttgtgagactcttttagagaacttatgaatacagtttatgacaattttcaaaagtttttcttagcttattttcacaagttctctaatatagtttat 13810012  T
Q  117 aaaaccact-tatagcaaatacaaaaacaatttaa 150  Q
    |||| || | ||||||| |||||||||||||||||    
T  13810011 aaaaacaatatatagcatatacaaaaacaatttaa 13809977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 37631536 - 37631649
Alignment:
Q  37 gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaat 135  Q
    ||||||||||||||||||||| ||||| |||||| |||| ||||||||||||  ||||||||||||| || |||||||| |||| || || ||| || |     
T  37631536 gaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaatatagcttacaaaaacagctaatatcatac 37631635  T
Q  136 acaaaaacaattta 149  Q
    ||||||||||||||    
T  37631636 acaaaaacaattta 37631649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 30286499 - 30286611
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaa-atac 137  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| || || ||  | ||||||  || ||||||||| ||||| ||||||||||| ||||    
T  30286499 aacttatgaaaacagcttatgacaattttcataagcttttttcaactaaattttcttagttcttcaaaatagcttataaaaacaacttatagcaacatac 30286598  T
Q  138 aaaaacaatttaa 150  Q
    |||||||||||||    
T  30286599 aaaaacaatttaa 30286611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 37 - 150
Target Start/End: Complemental strand, 27976697 - 27976574
Alignment:
Q  37 gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat---------aagttctctaagatagcttat-aaaaccactt 126  Q
    |||||||| |||||| ||||||||||| ||||||||||| ||||||||||||  |||||         |||||||| |||||||||||| ||||| ||||    
T  27976697 gaaaacttttgaaaatagcttatgacatttttcataagcttttttcagcttattttcattatttcattaagttctcgaagatagcttatgaaaacaactt 27976598  T
Q  127 atagcaaatacaaaaacaatttaa 150  Q
    |||||| |||||||||||||||||    
T  27976597 atagcatatacaaaaacaatttaa 27976574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 2295209 - 2295106
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||| |||  || |||||||||||||||||||||||| |||||||||||  | |||| ||||  |||| ||||||||| | |||||||||    
T  2295209 agttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcataagctctattcaacttattttcacaagttctctgatatagcttat 2295110  T
Q  117 aaaa 120  Q
    ||||    
T  2295109 aaaa 2295106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 51688782 - 51688685
Alignment:
Q  52 cagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta-taaaaccacttatagcaaatacaaaaacaattta 149  Q
    ||||||||||||||||||| |||  ||||||||||||| |||||||| |||| | |||||||||  ||||| ||||||||||  |||||||||||||||    
T  51688782 cagcttatgacacttttcagaagtttttttcagcttaatttcataag-tctccacgatagcttacgaaaacaacttatagcatgtacaaaaacaattta 51688685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 151
Target Start/End: Original strand, 27970251 - 27970387
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagtt-ctctaagatagctta 115  Q
    |||||| ||| |||||||  || ||||||| ||||| | |||||||| ||||||||||| |||||||| |||  |||||||||| | | || |||| |||    
T  27970251 agttttgtgatactctttgggagaacttataaaaacggtttatgacatttttcataagcttttttcagtttattttcataagttccccaaaaatagttta 27970350  T
Q  116 t-aaaaccacttatagcaaatacaaaaacaatttaat 151  Q
    |  |||| |||||||||| ||||||||||||||||||    
T  27970351 tggaaacaacttatagcatatacaaaaacaatttaat 27970387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 51929524 - 51929628
Alignment:
Q  45 atgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaac 143  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||||  | ||||||||||| || |||| |||||||| || ||||  ||| ||| ||||||    
T  51929524 atgaaaacagcttatgacaattttcataagcttttttcaacttatttccataagttctccaatatagtttataaaaacagcttaaggcatatataaaaac 51929623  T
Q  144 aattt 148  Q
    |||||    
T  51929624 aattt 51929628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 473253 - 473143
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||||||||| ||||||| ||| ||||||||||| ||||||| ||||  ||||||||||||| || | | ||||| ||||| |||||||||| | ||     
T  473253 aacttatgaaaaaagcttat-acaattttcataagcttttttcaacttattttcataagttctccaatagaacttataaaaacaacttatagcatacacg 473155  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  473154 aaaacaatttaa 473143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 6557085 - 6556950
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataa-gcctttttcagcttaaattcataagttctctaagatagctta 115  Q
    |||||| ||||||| |||  || |||||||||||| ||||||||||| |||||| || |  ||||| ||||||   ||||||||||| ||| ||| ||||    
T  6557085 agttttgtgagactatttgagagaacttatgaaaatagcttatgacagttttcaaaaggttttttttagcttattgtcataagttctttaatataactta 6556986  T
Q  116 t-aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
    | ||||| ||||||| || |||||||||||||||||    
T  6556985 taaaaacaacttataacatatacaaaaacaatttaa 6556950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 29904864 - 29904761
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||| |||  || ||||||| ||||||||||||| || |||||| |||| ||||||| ||||  |||||||||||| ||| |||| ||||    
T  29904864 agttttgtgagactgtttgagagaacttataaaaacagcttatggcaattttcaaaagcttttttcaccttattttcataagttctataatatagtttat 29904765  T
Q  117 aaaa 120  Q
    ||||    
T  29904764 aaaa 29904761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 37473493 - 37473418
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta 115  Q
    ||||| |||||||| ||||||||| ||||||||||| |||| |||||||  ||||||||||||| |||||| ||||    
T  37473493 aacttttgaaaacaacttatgacatttttcataagctttttccagcttattttcataagttctccaagataactta 37473418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 42174933 - 42174841
Alignment:
Q  52 cagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaac 143  Q
    |||||||||||| |||||||||||  |||| | ||||  ||||||||||||| || ||| ||||| ||||| |||||||||| ||||||||||    
T  42174933 cagcttatgacaattttcataagctgtttttaacttattttcataagttctccaatataacttataaaaacaacttatagcatatacaaaaac 42174841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 2778004 - 2777874
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta- 115  Q
    |||||| ||||||| |||  || ||||||||||| || ||||||||  | |||||||||| |||||||||||  ||||||||||||| ||| || ||||     
T  2778004 agttttgtgagactgtttaggagaacttatgaaaccaacttatgacg-tattcataagccgttttcagcttattttcataagttctccaagttaacttat 2777906  T
Q  116 taaaaccacttatagcaaatacaaaaacaatt 147  Q
    ||||||  ||||||||  ||||||| ||||||    
T  2777905 taaaacagcttatagcttatacaaagacaatt 2777874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 41184630 - 41184741
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacc-acttatagcaaataca 138  Q
    |||||||||||| ||||||||||| ||||||||||  ||||||| ||||  |||||||||| || || || |  ||||||||| | |||||  | |||||    
T  41184630 aacttatgaaaatagcttatgacaattttcataagtttttttcaacttattttcataagttttccaatatggtatataaaaccaaattataatatataca 41184729  T
Q  139 aaaacaatttaa 150  Q
    ||||||||||||    
T  41184730 aaaacaatttaa 41184741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 27820156 - 27820253
Alignment:
Q  19 ttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 117  Q
    |||| ||||||| |||| || || ||||||||| ||||||| ||| | |||||||||  |||||||||||  ||||||| |||| ||||||||||||||    
T  27820156 ttttgtgagactgttttggagaatttatgaaaa-agcttattacattgttcataagctattttcagcttattttcataaattctttaagatagcttata 27820253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 41195187 - 41195284
Alignment:
Q  53 agcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccactt-atagcaaatacaaaaacaatttaa 150  Q
    ||||||||||| |||| |||||| ||||||||||||  ||||||||||||| ||||||| |||| ||| || || |||| | ||||||||||| |||||    
T  41195187 agcttatgaca-ttttaataagcttttttcagcttattttcataagttctccaagatagtttatgaaaacagttgatagtatatacaaaaacagtttaa 41195284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 5721015 - 5720935
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagccttttt-cagcttaaattcataagttctctaagatagcttataaaa 120  Q
    |||||||||||||||||||||||| ||| ||||||  ||||| ||||| |  |||||| ||||||||| |||||||||||||    
T  5721015 aacttatgaaaacagcttatgacaattt-cataagtattttttcagctgattttcatatgttctctaatatagcttataaaa 5720935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 5741696 - 5741616
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagccttttt-cagcttaaattcataagttctctaagatagcttataaaa 120  Q
    |||||||||||||| ||||||||| ||| ||||||  ||||| ||||| |  |||||||||||||||| |||||||||||||    
T  5741696 aacttatgaaaacaacttatgacaattt-cataagtattttttcagctgattttcataagttctctaatatagcttataaaa 5741616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 27820330 - 27820427
Alignment:
Q  53 agcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaattta 149  Q
    |||||| |||| | |||||||||  |||||||||||  ||||||| ||||| |||||||||||||||| || | ||||||  ||||| ||||||||||    
T  27820330 agcttacgacattgttcataagctattttcagcttattttcataaattctccaagatagcttataaaaacagcatatagcttatacataaacaattta 27820427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 38503445 - 38503518
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagct 113  Q
    |||||||| ||||||| ||||||| | ||||||||   |||||||||||  ||||||||||||| |||||||||    
T  38503445 aacttatggaaacagcctatgacattgttcataagttgttttcagcttattttcataagttctccaagatagct 38503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 40977383 - 40977487
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca--cttatagcaaatac 137  Q
    ||||||||||||||  |||||||| |||||| |||| |||| |||||||  |||||| ||||||| | || ||||||||||  |  ||||||||| ||||    
T  40977383 aacttatgaaaacaatttatgacaattttcaaaagctttttccagcttattttcatatgttctcttatatggcttataaaattaaccttatagcatatac 40977482  T
Q  138 aaaaa 142  Q
    |||||    
T  40977483 aaaaa 40977487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 47432160 - 47432075
Alignment:
Q  65 ttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaaaaacaatttaa 150  Q
    |||||| |||| ||||||||||||  ||||||| ||||  || ||| ||||||||||  ||||||||| || ||||||||||||||    
T  47432160 ttttcacaagcttttttcagcttattttcataaattcttcaatataacttataaaacaccttatagcatattcaaaaacaatttaa 47432075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 7136979 - 7137054
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    ||||||||||||  |||||||||| | ||||||||   |||||||||||  ||||||||||||| ||||||||||||    
T  7136979 aacttatgaaaatcgcttatgaca-tattcataagttattttcagcttattttcataagttctccaagatagcttat 7137054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 37842336 - 37842427
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagc 131  Q
    |||||||||||||| || |||||| | |||||||||  |||||||||||  || |||||||||  |||||||||||| ||||| |||||||||    
T  37842336 aacttatgaaaacatctaatgaca-tgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagc 37842427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 36872806 - 36872716
Alignment:
Q  55 cttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaa 145  Q
    ||||||||| |||| |||||| ||||||| ||||  ||||||||||||  || ||||||| ||||| || ||||||||| ||||||||||||    
T  36872806 cttatgacaattttgataagc-tttttcaacttattttcataagttctgcaatatagcttgtaaaaacaacttatagcacatacaaaaacaa 36872716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 39596633 - 39596578
Alignment:
Q  94 ataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaattt 148  Q
    ||||| |||| ||||||||||||||||||| ||||||||  |||||||||||||||    
T  39596633 ataagctctccaagatagcttataaaaccatcttatagcttatacaaaaacaattt 39596578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 49888819 - 49888749
Alignment:
Q  78 ttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatt 147  Q
    ||||| |||||  |||||||||||||||||||||||||| ||||| ||| |||||  |||| |||||||||    
T  49888819 ttttcggcttattttcataagttctctaagatagcttatgaaaacaactaatagcttatacgaaaacaatt 49888749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 36872352 - 36872299
Alignment:
Q  43 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcata 96  Q
    ||||||||||||||||| | | ||||||||||| ||||||| ||||| ||||||    
T  36872352 ttatgaaaacagcttattataattttcataagcttttttcaacttaatttcata 36872299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 1432605 - 1432497
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||||||||| ||| ||||||| | |||||||| | |  | ||||||  ||||||||||||| ||||||| |||| ||||| | |||||||  ||| |    
T  1432605 aacttatgaaaatagcgtatgacattgttcataagacatacttagcttactttcataagttctccaagatagtttatgaaaacaatttatagcttataaa 1432506  T
Q  139 aaaacaatt 147  Q
    |||||||||    
T  1432505 aaaacaatt 1432497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 3887612 - 3887692
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 120  Q
    |||||||||||||| ||||||||| | |||||||||  |||| | ||||  |||||||||||||  || |||||| |||||    
T  3887612 aacttatgaaaacatcttatgacattgttcataagctgtttttaacttattttcataagttctcctagctagcttgtaaaa 3887692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 10199389 - 10199464
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||| ||||||| ||||||||||| | ||||||||   |||||||||||  |||||||| ||||||| |||||||||    
T  10199389 aactcatgaaaatagcttatgaca-tgttcataagttgttttcagcttattttcataagctctctaaaatagcttat 10199464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 10744390 - 10744315
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    ||||| ||||||||||||||| || | |||||||||  |||||| ||||  || ||||||||||||||| |||||||    
T  10744390 aacttgtgaaaacagcttatggca-tgttcataagctgttttcatcttatttttataagttctctaagacagcttat 10744315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 45975776 - 45975704
Alignment:
Q  44 tatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||||||||  ||| ||| | |||||||||  |||||||||||  ||||||| ||||| ||||||||||||    
T  45975776 tatgaaaacagtgtataacattattcataagctgttttcagcttattttcataaattctccaagatagcttat 45975704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 51695475 - 51695551
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||||  ||||| ||||| ||| | |||||||||  |||||||||||  ||||||| ||||| ||||||||||||    
T  51695475 aacttatataaacaacttatcacattgttcataagctattttcagcttattttcataaattctccaagatagcttat 51695551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 2e-20; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 46 - 148
Target Start/End: Original strand, 34430447 - 34430550
Alignment:
Q  46 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaaca 144  Q
    |||||||||||||||||| || |||||||| ||||||||||||  ||||||| ||||| |||||||||||| |||||  |||||| || |||||||||||    
T  34430447 tgaaaacagcttatgacatttatcataagcttttttcagcttattttcataacttctccaagatagcttatgaaaacaccttataacatatacaaaaaca 34430546  T
Q  145 attt 148  Q
    ||||    
T  34430547 attt 34430550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 9763644 - 9763574
Alignment:
Q  46 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||||  || |||||||||    
T  9763644 tgaaaacagcttatgacacttttgataagcttttttcaacttaatttcataagttctacaatatagcttat 9763574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 31813274 - 31813175
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||| |||  || ||||||||||||  |||||||| | | |||||||||| |||||||||||  |||||| |||||| ||||||||||||    
T  31813274 agttttgtgagactatttgggagaacttatgaaaattgcttatgagattgttcataagccgttttcagcttattttcatatgttctccaagatagcttat 31813175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 9093538 - 9093647
Alignment:
Q  42 cttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaa 140  Q
    |||||||||| ||||||||||| | || |||| |  |||||||||||  ||| |||||||||||||| ||||||| |||||  ||||||||  |||| ||    
T  9093538 cttatgaaaatagcttatgacattgttaataacctgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatacgaa 9093637  T
Q  141 aacaatttaa 150  Q
    ||||||||||    
T  9093638 aacaatttaa 9093647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 20368161 - 20368268
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    |||||||||||||| ||||||||| | |||||||||   ||||| ||||  ||||||||||||| |||| ||||||| ||||| ||||||| |  |||||    
T  20368161 aacttatgaaaacaacttatgaca-tgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaacaacttataactcataca 20368259  T
Q  139 aaaacaatt 147  Q
    |||||||||    
T  20368260 aaaacaatt 20368268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 2735159 - 2735048
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 138  Q
    ||||||||||||| |||||||||| |||||||||||  ||||| |||||  |||||||||| |  ||||| |||||| |||||  |||||||   |||||    
T  2735159 aacttatgaaaacggcttatgacatttttcataagctgttttcggcttattttcataagttgttcaagattgcttatgaaaacagcttatagattataca 2735060  T
Q  139 aaaacaatttaa 150  Q
    |||| |||||||    
T  2735059 aaaataatttaa 2735048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 65 - 147
Target Start/End: Complemental strand, 6536680 - 6536597
Alignment:
Q  65 ttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatt 147  Q
    ||||||||||| ||||||| ||||  ||||||| ||||| || ||||||| | ||||| |||||||||| ||||||||||||||    
T  6536680 ttttcataagcttttttcaacttattttcataaattctccaatatagcttctaaaaacaacttatagcatatacaaaaacaatt 6536597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 6909892 - 6909963
Alignment:
Q  80 ttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
    |||||||||| ||||||| ||||| ||||||  |||| ||||| |||||||||| |||||||||||||||||    
T  6909892 ttcagcttaatttcataaattctccaagatatgttatgaaaacaacttatagcatatacaaaaacaatttaa 6909963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 35070630 - 35070708
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataa 118  Q
    |||||| ||||||||||||||||| |||||| |||| |||||  ||||   ||||||||||||| || |||||||||||    
T  35070630 aacttacgaaaacagcttatgacaattttcacaagcttttttgggcttgttttcataagttctccaaaatagcttataa 35070708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 150
Target Start/End: Complemental strand, 24626380 - 24626274
Alignment:
Q  37 gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaat 135  Q
    |||||||| ||||||||||||||||| || ||||||| | ||||||||||        ||| | ||| |||||||||||| ||||| |||||||| | ||    
T  24626380 gaaaacttttgaaaacagcttatgacgctcttcataaacttttttcagct--------taattactccaagatagcttatgaaaacaacttatagaatat 24626289  T
Q  136 acaaaaacaatttaa 150  Q
    |||||||||||||||    
T  24626288 acaaaaacaatttaa 24626274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 35099119 - 35099019
Alignment:
Q  47 gaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaa 145  Q
    |||||||||| |||||| ||||| ||||  ||||||| ||||  |||| || | |||||||||||||||| ||||| ||||||| || ||||||||||||    
T  35099119 gaaaacagctaatgacatttttcgtaagt-tttttcaacttattttcaaaaatactctaagatagcttatgaaaacaacttataacatatacaaaaacaa 35099021  T
Q  146 tt 147  Q
    ||    
T  35099020 tt 35099019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 18076290 - 18076175
Alignment:
Q  43 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc-----tct--aagatagcttat-aaaaccacttatagcaaa 134  Q
    |||||||| |||||||||||| ||||||| |||  |||||| |||| ||||||||||||     |||  || ||||||||| ||||| |||||||||||     
T  18076290 ttatgaaaccagcttatgacaattttcatgagctgttttcaacttatattcataagttcttagttcttcaatatagcttataaaaacaacttatagcaat 18076191  T
Q  135 tacaaaaacaatttaa 150  Q
    || |||||||||||||    
T  18076190 tagaaaaacaatttaa 18076175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 31624179 - 31624108
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagc 112  Q
    |||||||||||||||||||||||| | |||||||||  |||||| ||||  ||||||| ||||| ||||||||    
T  31624179 aacttatgaaaacagcttatgaca-tgttcataagctgttttcaacttattttcataatttctccaagatagc 31624108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 9912171 - 9912234
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctc 103  Q
    ||||||||||| |||||||||||| | |||||||||  |||| ||||||  |||||||||||||    
T  9912171 aacttatgaaaccagcttatgacattgttcataagctgttttgagcttattttcataagttctc 9912234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 24982818 - 24982696
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| ||||||| |||| || ||| | ||| |||||||||||||| |||| || ||| ||||| ||||||   |||||||||||| || ||| |||||    
T  24982818 agttttgtgagactgttttggagaacatttgagaacagcttatgacatttttaatgagctttttttagcttaccctcataagttctccaaaataacttat 24982719  T
Q  117 -aaaaccacttatagcaaataca 138  Q
     |||||  ||||||||| |||||    
T  24982718 gaaaacagcttatagcatataca 24982696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 837234 - 837307
Alignment:
Q  78 ttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 150  Q
    |||||||||||  ||||||||||||| ||||||||| || ||||| |||||||||  | || ||||||||||||    
T  837234 ttttcagcttattttcataagttctccaagatagctaatgaaaactacttatagcttacaccaaaacaatttaa 837307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 848079 - 848022
Alignment:
Q  40 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataa 97  Q
    ||||||| ||||| |||||||||| ||||| ||||| ||||||||||||  |||||||    
T  848079 aacttataaaaactgcttatgacatttttcttaagcttttttcagcttattttcataa 848022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 58855 - 58756
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    |||||| || |||| |||| ||||| |||||||| ||| |||||||| ||||||||||| ||||||| ||||| ||||||||||||  || |||||||||    
T  58855 agttttgtgtgactgtttttgaaaatttatgaaagcagtttatgacaattttcataagcttttttcaacttaatttcataagttcttcaacatagcttat 58756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 22324 - 22245
Alignment:
Q  37 gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 116  Q
    ||||||||||  ||||||||||||||| ||||| ||||| ||||||||||||  |||||||||| || || |||||||||    
T  22324 gaaaacttatagaaacagcttatgacaattttcgtaagcttttttcagcttattttcataagttttccaacatagcttat 22245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0528 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 939 - 1003
Alignment:
Q  17 agttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt 81  Q
    |||||| ||| ||| |||| || ||||||| |||| ||||||||||| ||||||||||| |||||    
T  939 agttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataagctttttt 1003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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