View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21233_high_21 (Length: 404)

Name: NF21233_high_21
Description: NF21233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21233_high_21
NF21233_high_21
[»] chr6 (8 HSPs)
chr6 (217-343)||(17193740-17193866)
chr6 (217-343)||(30780342-30780468)
chr6 (216-343)||(25054512-25054639)
chr6 (217-343)||(3962611-3962737)
chr6 (211-271)||(25054433-25054493)
chr6 (214-271)||(30780266-30780323)
chr6 (215-271)||(17193885-17193941)
chr6 (217-271)||(3962538-3962592)
[»] chr5 (11 HSPs)
chr5 (217-343)||(11772814-11772940)
chr5 (217-343)||(17534545-17534671)
chr5 (22-142)||(30751618-30751738)
chr5 (215-289)||(8881020-8881094)
chr5 (22-88)||(30062193-30062259)
chr5 (22-85)||(30675137-30675200)
chr5 (22-88)||(30049606-30049672)
chr5 (217-271)||(11772741-11772795)
chr5 (217-271)||(17534690-17534744)
chr5 (216-259)||(8881095-8881138)
chr5 (170-216)||(30751693-30751739)
[»] chr3 (5 HSPs)
chr3 (218-343)||(34630661-34630786)
chr3 (217-360)||(46905406-46905546)
chr3 (214-271)||(34630586-34630643)
chr3 (217-267)||(22899519-22899569)
chr3 (217-271)||(46906265-46906319)
[»] chr4 (2 HSPs)
chr4 (220-343)||(51268398-51268521)
chr4 (217-271)||(51268324-51268378)
[»] chr8 (4 HSPs)
chr8 (217-343)||(10756523-10756649)
chr8 (217-343)||(29739982-29740108)
chr8 (216-271)||(29739908-29739963)
chr8 (217-271)||(10756450-10756504)
[»] chr7 (2 HSPs)
chr7 (255-396)||(43405484-43405625)
chr7 (215-249)||(43405457-43405491)


Alignment Details
Target: chr6 (Bit Score: 103; Significance: 4e-51; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 217 - 343
Target Start/End: Original strand, 17193740 - 17193866
Alignment:
Q  217 gagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataatatgttgacacatcatccccatcctttgtttaattaacctgcaacct 316  Q
    |||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  17193740 gagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataatatgttgacacatcatccccatcctttgtttaattaaccgacaacct 17193839  T
Q  317 gatatgaaattgaaatgtattaaaaat 343  Q
     ||||||||||||||||||||||||||    
T  17193840 aatatgaaattgaaatgtattaaaaat 17193866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 30780468 - 30780342
Alignment:
Q  217 gagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataatatgttgacacatcatccccatcctttgtttaattaacctgcaacct 316  Q
    |||||||| |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||  ||||||    
T  30780468 gagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataacatgttgacacatcatccccatcctttgtttaattaaccgacaacct 30780369  T
Q  317 gatatgaaattgaaatgtattaaaaat 343  Q
     ||||||||||||||||||||||||||    
T  30780368 aatatgaaattgaaatgtattaaaaat 30780342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 216 - 343
Target Start/End: Complemental strand, 25054639 - 25054512
Alignment:
Q  216 agagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataatatgttgacacatcatccccatcctttgtttaattaacctgcaacc 315  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||   |||||    
T  25054639 agagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataacatgttgacacatcatccccatcctttgtttaattaactgacaacc 25054540  T
Q  316 tgatatgaaattgaaatgtattaaaaat 343  Q
    | ||||||||||||||||||||||||||    
T  25054539 taatatgaaattgaaatgtattaaaaat 25054512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 3962737 - 3962611
Alignment:
Q  217 gagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataatatgttgacacatcatccccatcctttgtttaattaacctgcaacct 316  Q
    |||||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||  ||||||    
T  3962737 gagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataacatgttgacacatcatctccatcctttgtttaattaaccgacaacct 3962638  T
Q  317 gatatgaaattgaaatgtattaaaaat 343  Q
     ||||||||||||||||||||||||||    
T  3962637 aatatgaaattgaaatgtattaaaaat 3962611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 25054433 - 25054493
Alignment:
Q  211 ataaaagagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataata 271  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  25054433 ataaaagagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataata 25054493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 30780266 - 30780323
Alignment:
Q  214 aaagagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataata 271  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  30780266 aaagagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataata 30780323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 17193941 - 17193885
Alignment:
Q  215 aagagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataata 271  Q
    |||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  17193941 aagagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataata 17193885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 3962538 - 3962592
Alignment:
Q  217 gagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataata 271  Q
    |||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  3962538 gagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataata 3962592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 9e-49; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 11772940 - 11772814
Alignment:
Q  217 gagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataatatgttgacacatcatccccatcctttgtttaattaacctgcaacct 316  Q
    |||||||| |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||  ||||||    
T  11772940 gagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataacatgttgacacatcatccccatcctttgtttaattaaccaacaacct 11772841  T
Q  317 gatatgaaattgaaatgtattaaaaat 343  Q
     ||||||||||||||||||||||||||    
T  11772840 aatatgaaattgaaatgtattaaaaat 11772814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 217 - 343
Target Start/End: Original strand, 17534545 - 17534671
Alignment:
Q  217 gagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataatatgttgacacatcatccccatcctttgtttaattaacctgcaacct 316  Q
    |||||||| |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||  ||||||    
T  17534545 gagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataacatgttgacacatcatccccatcctttgtttaattaaccaacaacct 17534644  T
Q  317 gatatgaaattgaaatgtattaaaaat 343  Q
     ||||||||||||||||||||||||||    
T  17534645 aatatgaaattgaaatgtattaaaaat 17534671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 30751618 - 30751738
Alignment:
Q  22 tggccgacagtataatgatctttggagtaattagttctggtgtgtgtcatttactgatatttgttttgagaaatgatatttttaacgtacatgcaaagca 121  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |    
T  30751618 tggccgacagaataatgatctttggagtaattagttctggtgtgtgtcatttactcatatttgttttgagaattgatatttttaacgtacatgcaaagta 30751717  T
Q  122 atgtaacattaaatatataaa 142  Q
    ||||||||||| | |||||||    
T  30751718 atgtaacattacaaatataaa 30751738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 8881020 - 8881094
Alignment:
Q  215 aagagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataatatgttgacacatcatcccc 289  Q
    |||||||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  8881020 aagagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataacatgttgacacatcatcccc 8881094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 30062193 - 30062259
Alignment:
Q  22 tggccgacagtataatgatctttggagtaattagttctggtgtgtgtcatttactgatatttgtttt 88  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30062193 tggccgacagaataattatctttggagtaattagttctggtgtgtgtcatttactgatatttgtttt 30062259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 30675200 - 30675137
Alignment:
Q  22 tggccgacagtataatgatctttggagtaattagttctggtgtgtgtcatttactgatatttgt 85  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30675200 tggccgacagaataatgatctttggagtaattagttccggtgtgtgtcatttactgatatttgt 30675137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 30049606 - 30049672
Alignment:
Q  22 tggccgacagtataatgatctttggagtaattagttctggtgtgtgtcatttactgatatttgtttt 88  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30049606 tggccgacagaataattatctttggagtaattagttctggtgtgtgtcatttactcatatttgtttt 30049672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 11772741 - 11772795
Alignment:
Q  217 gagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataata 271  Q
    |||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  11772741 gagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataata 11772795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 17534744 - 17534690
Alignment:
Q  217 gagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataata 271  Q
    |||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  17534744 gagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataata 17534690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 8881138 - 8881095
Alignment:
Q  216 agagaaatgttaaggacaaactctcaaacacactatttcaacac 259  Q
    ||||||||| |||||||||||||||||||||||| |||||||||    
T  8881138 agagaaatgctaaggacaaactctcaaacacactctttcaacac 8881095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 30751693 - 30751739
Alignment:
Q  170 atatttctaacgtatatgcaaagtaatgtaacattacaactataaaa 216  Q
    |||||| ||||||| |||||||||||||||||||||||| |||||||    
T  30751693 atatttttaacgtacatgcaaagtaatgtaacattacaaatataaaa 30751739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 4e-48; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 218 - 343
Target Start/End: Complemental strand, 34630786 - 34630661
Alignment:
Q  218 agaaatgttaaggacaaactctcaaacacactatttcaacacattccaataatatgttgacacatcatccccatcctttgtttaattaacctgcaacctg 317  Q
    ||||||| |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||  ||||||     
T  34630786 agaaatgctaaggacaaactctcaaacacactctttcaacacactccaataacatgttgacacatcatccccatcctttgtttaattaaccgacaaccta 34630687  T
Q  318 atatgaaattgaaatgtattaaaaat 343  Q
    ||||||||||||||||||||||||||    
T  34630686 atatgaaattgaaatgtattaaaaat 34630661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 217 - 360
Target Start/End: Original strand, 46905406 - 46905546
Alignment:
Q  217 gagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataatatgttgacacatcatccccatcctttgtttaattaacctgcaacct 316  Q
    |||||||| |||||| ||||||||||||||||  |||||||||| |||||||| ||||||| |||||   |||||||||||||||||||||| |||||||    
T  46905406 gagaaatgctaaggataaactctcaaacacacactttcaacacactccaataacatgttgatacatc---cccatcctttgtttaattaaccggcaacct 46905502  T
Q  317 gatatgaaattgaaatgtattaaaaatattgagaattattaaac 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  46905503 gatatgaaattgaaatgtattaaaaatattgagaattattaaac 46905546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 34630586 - 34630643
Alignment:
Q  214 aaagagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataata 271  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  34630586 aaagagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataata 34630643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 22899569 - 22899519
Alignment:
Q  217 gagaaatgttaaggacaaactctcaaacacactatttcaacacattccaat 267  Q
    |||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  22899569 gagaaatgctaaggacaaactctcaaacacactctttcaacacactccaat 22899519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 46906319 - 46906265
Alignment:
Q  217 gagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataata 271  Q
    |||||||| ||||||||||| |||||||||||| |||  ||||| ||||||||||    
T  46906319 gagaaatgctaaggacaaaccctcaaacacactctttttacacactccaataata 46906265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 6e-47; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 220 - 343
Target Start/End: Complemental strand, 51268521 - 51268398
Alignment:
Q  220 aaatgttaaggacaaactctcaaacacactatttcaacacattccaataatatgttgacacatcatccccatcctttgtttaattaacctgcaacctgat 319  Q
    ||||| |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||  |||||| ||    
T  51268521 aaatgctaaggacaaactctcaaacacactctttcaacacactccaataacatgttgacacatcatccccatcctttgtttaattaaccgacaacctaat 51268422  T
Q  320 atgaaattgaaatgtattaaaaat 343  Q
    ||||||||||||||||||||||||    
T  51268421 atgaaattgaaatgtattaaaaat 51268398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 51268324 - 51268378
Alignment:
Q  217 gagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataata 271  Q
    |||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  51268324 gagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataata 51268378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 10756649 - 10756523
Alignment:
Q  217 gagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataatatgttgacacatcatccccatcctttgtttaattaacctgcaacct 316  Q
    |||||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||   ||||||    
T  10756649 gagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataacatgttgacacatcatccccatcctttgtttaattaactgacaacct 10756550  T
Q  317 gatatgaaattgaaatgtattaaaaat 343  Q
     ||||||||||||||||||||||||||    
T  10756549 aatatgaaattgaaatgtattaaaaat 10756523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 29740108 - 29739982
Alignment:
Q  217 gagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataatatgttgacacatcatccccatcctttgtttaattaacctgcaacct 316  Q
    |||||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||   ||||||    
T  29740108 gagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataacatgttgacacatcatccccatcctttgtttaattaactgacaacct 29740009  T
Q  317 gatatgaaattgaaatgtattaaaaat 343  Q
     ||||||||||||||||||||||||||    
T  29740008 aatatgaaattgaaatgtattaaaaat 29739982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 29739908 - 29739963
Alignment:
Q  216 agagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataata 271  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  29739908 agagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataata 29739963  T

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Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 10756450 - 10756504
Alignment:
Q  217 gagaaatgttaaggacaaactctcaaacacactatttcaacacattccaataata 271  Q
    |||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  10756450 gagaaatgctaaggacaaactctcaaacacactctttcaacacactccaataata 10756504  T

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Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 255 - 396
Target Start/End: Original strand, 43405484 - 43405625
Alignment:
Q  255 aacacattccaataatatgttgacacatcatccccatcctttgtttaattaacctgcaacctgatatgaaattgaaatgtattaaaaatattgagaatta 354  Q
    |||||| |||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43405484 aacacactccaataacatgttgacacgtcatccccatcctttgtttaattaaccggcaacctgatatgaaattgaaatgtattaaaaatattgagaatta 43405583  T
Q  355 ttaaacnnnnnnnnnngttgtttaatctttaaccattcatct 396  Q
    ||||||          ||||||||| ||||||||||||||||    
T  43405584 ttaaacttttttttttgttgtttaagctttaaccattcatct 43405625  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 249
Target Start/End: Original strand, 43405457 - 43405491
Alignment:
Q  215 aagagaaatgttaaggacaaactctcaaacacact 249  Q
    |||||||||| ||||||||||||||||||||||||    
T  43405457 aagagaaatgctaaggacaaactctcaaacacact 43405491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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