View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21233_high_61 (Length: 234)
Name: NF21233_high_61
Description: NF21233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21233_high_61 |
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Alignment Details
Target: chr7 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 36999385 - 36999162
Alignment:
| Q |
1 |
tatattttcttttctaaataaattgttaattttttgtaagagatgttcctaaacaaattcagttacacataaaatgannnnnnnn--aatcaaatgtaat |
98 |
Q |
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| T |
36999385 |
tatattttcttttctgaataaattgttaattttttgtaagatatgttcctaaacaaattcagttacacataaaatgattttttttttaatcaaatgtaat |
36999286 |
T |
|
| Q |
99 |
taatcatggtatatgcctgattattattattttttaggtacattttaggtgcaacattatttcaatcaaaattaaccataaaattacctcttagttaagg |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36999285 |
taatcatggtatatgcctgattattattattttttaggtacattttaggtgcaacattatttcaatcaaaattaaccataaaattacctcttagttaagg |
36999186 |
T |
|
| Q |
199 |
atagtttttaatgttgtgtgagct |
222 |
Q |
| |
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|||||||||||||||||||||||| |
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|
| T |
36999185 |
atagtttttaatgttgtgtgagct |
36999162 |
T |
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