View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21233_high_64 (Length: 231)
Name: NF21233_high_64
Description: NF21233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21233_high_64 |
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Alignment Details
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 8571324 - 8571122
Alignment:
| Q |
10 |
aggaacacagaccctccaaaccacctattcctcccttgacgttcacgtcggtcaatcatattcagttctagtaaccgcagatcaacctggtcaagactat |
109 |
Q |
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| T |
8571324 |
aggaacacacaccctccaaaccacctattcctcccttgacgttcacgtcggtcaatcatactcagttctagtaaccgcagatcaacctagtcaagactat |
8571225 |
T |
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| Q |
110 |
tatattgttgtttcctctcgatttaccaatcctgttctcacctccactggaattcttcgctacagcaactctgcaggcccagtttcaggtccaccccccg |
209 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8571224 |
tatattgttgtttcctctcgatttaccaatcctgtactcacctccactggaattcttcgctacagcaactctgcaggcccagtttcaggtccaccccccg |
8571125 |
T |
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| Q |
210 |
gtg |
212 |
Q |
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||| |
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| T |
8571124 |
gtg |
8571122 |
T |
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