View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21233_low_16 (Length: 480)

Name: NF21233_low_16
Description: NF21233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21233_low_16
NF21233_low_16
[»] chr1 (71 HSPs)
chr1 (145-338)||(40811400-40811593)
chr1 (338-453)||(40811192-40811307)
chr1 (338-454)||(36511335-36511451)
chr1 (334-454)||(40110652-40110772)
chr1 (351-454)||(24516330-24516433)
chr1 (12-114)||(40811626-40811727)
chr1 (344-453)||(36509809-36509917)
chr1 (338-454)||(14765098-14765214)
chr1 (338-454)||(19464596-19464712)
chr1 (334-434)||(22167795-22167895)
chr1 (331-454)||(51725339-51725462)
chr1 (347-454)||(51726857-51726964)
chr1 (334-454)||(40812611-40812729)
chr1 (334-454)||(14169615-14169735)
chr1 (354-454)||(40109357-40109457)
chr1 (369-451)||(26803251-26803333)
chr1 (227-335)||(51726700-51726809)
chr1 (344-434)||(19466215-19466305)
chr1 (363-453)||(24517643-24517733)
chr1 (354-454)||(8092594-8092694)
chr1 (338-434)||(13641273-13641369)
chr1 (334-434)||(14764245-14764345)
chr1 (334-454)||(25785964-25786084)
chr1 (354-454)||(26801939-26802039)
chr1 (369-454)||(38280846-38280931)
chr1 (338-454)||(3978040-3978156)
chr1 (338-410)||(3979317-3979389)
chr1 (150-335)||(22167924-22168103)
chr1 (359-452)||(45570317-45570409)
chr1 (378-454)||(43808565-43808641)
chr1 (292-335)||(21277145-21277188)
chr1 (343-453)||(13929292-13929402)
chr1 (391-453)||(21246532-21246594)
chr1 (378-452)||(43807433-43807507)
chr1 (338-454)||(25787168-25787284)
chr1 (338-454)||(47410980-47411096)
chr1 (338-453)||(26056151-26056266)
chr1 (338-408)||(16218482-16218552)
chr1 (186-271)||(21277263-21277349)
chr1 (343-392)||(13642566-13642615)
chr1 (395-452)||(22169280-22169337)
chr1 (338-407)||(49141500-49141569)
chr1 (378-454)||(30743083-30743159)
chr1 (346-454)||(47411460-47411568)
chr1 (338-454)||(47560135-47560251)
chr1 (186-335)||(13930489-13930640)
chr1 (186-335)||(14071018-14071169)
chr1 (343-454)||(14071212-14071323)
chr1 (346-400)||(21277044-21277098)
chr1 (372-434)||(34653451-34653513)
chr1 (382-452)||(45042607-45042677)
chr1 (338-452)||(49139799-49139913)
chr1 (354-452)||(50679841-50679939)
chr1 (341-410)||(9592278-9592347)
chr1 (303-335)||(8092749-8092781)
chr1 (281-337)||(9633924-9633980)
chr1 (378-454)||(38283783-38283859)
chr1 (343-434)||(13930684-13930775)
chr1 (338-405)||(47136691-47136758)
chr1 (281-327)||(7306163-7306209)
chr1 (293-335)||(14169770-14169812)
chr1 (338-400)||(16217490-16217552)
chr1 (281-335)||(26056058-26056112)
chr1 (356-454)||(35683051-35683149)
chr1 (281-335)||(50678514-50678567)
chr1 (338-432)||(52181309-52181403)
chr1 (69-98)||(44977627-44977656)
chr1 (341-413)||(14171275-14171347)
chr1 (338-454)||(14390254-14390370)
chr1 (338-410)||(48935114-48935186)
chr1 (280-328)||(51300167-51300215)
[»] chr5 (76 HSPs)
chr5 (334-454)||(32735479-32735599)
chr5 (343-453)||(22819558-22819668)
chr5 (338-454)||(12830942-12831058)
chr5 (338-454)||(12862922-12863038)
chr5 (344-454)||(42510110-42510220)
chr5 (341-454)||(32734129-32734240)
chr5 (338-440)||(15857622-15857724)
chr5 (354-434)||(24761741-24761821)
chr5 (345-454)||(42511677-42511786)
chr5 (378-454)||(11907205-11907281)
chr5 (338-433)||(40058035-40058130)
chr5 (338-454)||(5384350-5384466)
chr5 (378-454)||(39135692-39135768)
chr5 (363-434)||(8188229-8188300)
chr5 (150-335)||(2167301-2167480)
chr5 (226-335)||(12933902-12934011)
chr5 (226-335)||(12948063-12948172)
chr5 (343-452)||(22812396-22812505)
chr5 (354-434)||(12933767-12933847)
chr5 (354-454)||(18677972-18678072)
chr5 (378-454)||(24070401-24070477)
chr5 (338-434)||(40059332-40059428)
chr5 (395-454)||(12861545-12861604)
chr5 (226-325)||(32734292-32734391)
chr5 (334-396)||(2167515-2167576)
chr5 (334-432)||(26403325-26403423)
chr5 (378-452)||(39134665-39134739)
chr5 (363-452)||(224619-224708)
chr5 (333-454)||(19525287-19525408)
chr5 (338-410)||(1663227-1663299)
chr5 (295-335)||(5383093-5383133)
chr5 (361-453)||(8187164-8187254)
chr5 (391-451)||(11906354-11906414)
chr5 (395-454)||(12829566-12829625)
chr5 (341-400)||(15856584-15856642)
chr5 (391-454)||(23679143-23679206)
chr5 (391-454)||(23855606-23855669)
chr5 (338-400)||(15613555-15613617)
chr5 (334-400)||(15614960-15615026)
chr5 (289-335)||(24761630-24761676)
chr5 (289-335)||(40058169-40058215)
chr5 (395-452)||(22818158-22818215)
chr5 (354-434)||(7426657-7426737)
chr5 (354-434)||(12947928-12948008)
chr5 (334-454)||(15510263-15510383)
chr5 (338-405)||(18695651-18695718)
chr5 (342-433)||(19827148-19827239)
chr5 (338-381)||(22819521-22819564)
chr5 (343-410)||(26404219-26404286)
chr5 (363-454)||(30253582-30253673)
chr5 (343-453)||(1273086-1273196)
chr5 (280-334)||(15856685-15856739)
chr5 (338-400)||(42979498-42979560)
chr5 (343-432)||(326362-326451)
chr5 (341-434)||(12936109-12936202)
chr5 (334-410)||(4566991-4567067)
chr5 (338-454)||(4567978-4568094)
chr5 (403-454)||(7427993-7428044)
chr5 (285-328)||(28702729-28702772)
chr5 (341-392)||(38473562-38473613)
chr5 (281-335)||(7426792-7426846)
chr5 (338-452)||(10085849-10085963)
chr5 (289-335)||(19525207-19525253)
chr5 (356-410)||(21387677-21387731)
chr5 (281-335)||(21387788-21387842)
chr5 (281-330)||(18693854-18693903)
chr5 (341-434)||(19523999-19524091)
chr5 (354-454)||(21389163-21389261)
chr5 (344-453)||(27894033-27894142)
chr5 (378-434)||(8284288-8284344)
chr5 (338-410)||(15509235-15509307)
chr5 (334-410)||(18693738-18693814)
chr5 (378-454)||(21006136-21006212)
chr5 (378-454)||(21011852-21011928)
chr5 (378-454)||(24071487-24071562)
chr5 (341-373)||(26911234-26911266)
[»] chr3 (75 HSPs)
chr3 (341-454)||(43346454-43346567)
chr3 (341-453)||(12062391-12062503)
chr3 (338-454)||(23559815-23559931)
chr3 (341-434)||(21127941-21128034)
chr3 (145-335)||(12062155-12062349)
chr3 (349-454)||(23561140-23561245)
chr3 (341-454)||(35173143-35173256)
chr3 (373-454)||(7921682-7921763)
chr3 (161-335)||(23559970-23560147)
chr3 (338-453)||(12060656-12060770)
chr3 (371-454)||(48867467-48867550)
chr3 (334-434)||(35174382-35174482)
chr3 (374-454)||(39530791-39530871)
chr3 (344-454)||(43345315-43345425)
chr3 (378-454)||(1031812-1031888)
chr3 (334-434)||(25583130-25583230)
chr3 (334-454)||(42633886-42634006)
chr3 (354-454)||(51401371-51401471)
chr3 (338-454)||(54653970-54654086)
chr3 (354-433)||(48866158-48866237)
chr3 (338-432)||(32980456-32980550)
chr3 (334-434)||(10987653-10987753)
chr3 (338-454)||(47855342-47855458)
chr3 (378-454)||(50150717-50150793)
chr3 (391-454)||(46690351-46690414)
chr3 (12-113)||(23560192-23560296)
chr3 (376-454)||(32999793-32999871)
chr3 (341-410)||(51825628-51825697)
chr3 (378-454)||(2088838-2088914)
chr3 (338-434)||(8371236-8371332)
chr3 (338-410)||(11219470-11219542)
chr3 (378-454)||(33000844-33000920)
chr3 (338-454)||(42632702-42632818)
chr3 (378-454)||(45730633-45730709)
chr3 (343-454)||(11220667-11220778)
chr3 (284-334)||(43346361-43346411)
chr3 (281-335)||(49333134-49333187)
chr3 (378-454)||(4067922-4067998)
chr3 (338-410)||(29536754-29536826)
chr3 (378-438)||(38639030-38639090)
chr3 (378-434)||(39531860-39531916)
chr3 (338-454)||(41386126-41386242)
chr3 (338-454)||(53808314-53808430)
chr3 (334-429)||(49334337-49334432)
chr3 (280-334)||(21128077-21128131)
chr3 (281-335)||(32979239-32979293)
chr3 (333-434)||(43101910-43102011)
chr3 (338-403)||(47808110-47808175)
chr3 (343-432)||(49122011-49122100)
chr3 (343-431)||(19253011-19253099)
chr3 (338-454)||(32974227-32974343)
chr3 (338-454)||(41387437-41387553)
chr3 (354-410)||(47806858-47806914)
chr3 (378-454)||(53901565-53901641)
chr3 (367-454)||(23886696-23886783)
chr3 (343-454)||(54752612-54752723)
chr3 (338-400)||(2124079-2124141)
chr3 (281-335)||(11219581-11219635)
chr3 (281-335)||(17350013-17350067)
chr3 (356-454)||(19579316-19579414)
chr3 (338-400)||(25585837-25585899)
chr3 (356-454)||(32973135-32973233)
chr3 (281-335)||(39133168-39133222)
chr3 (280-334)||(48254799-48254853)
chr3 (281-330)||(8371376-8371425)
chr3 (369-434)||(8372651-8372716)
chr3 (373-454)||(17350141-17350222)
chr3 (281-330)||(53808474-53808523)
chr3 (338-410)||(26798910-26798982)
chr3 (360-400)||(32979138-32979178)
chr3 (338-454)||(47765435-47765550)
chr3 (354-438)||(47766971-47767054)
chr3 (354-410)||(48252973-48253029)
chr3 (378-434)||(50765818-50765874)
chr3 (378-454)||(53342712-53342788)
[»] chr2 (61 HSPs)
chr2 (147-335)||(14509360-14509549)
chr2 (339-454)||(14510514-14510629)
chr2 (338-454)||(14509205-14509321)
chr2 (363-454)||(25570899-25570990)
chr2 (354-454)||(7983715-7983814)
chr2 (343-454)||(15850668-15850779)
chr2 (348-454)||(3533640-3533746)
chr2 (334-434)||(3532210-3532310)
chr2 (373-454)||(15850108-15850189)
chr2 (378-454)||(7982308-7982384)
chr2 (341-452)||(10368392-10368503)
chr2 (12-103)||(14509586-14509679)
chr2 (344-454)||(25569765-25569875)
chr2 (333-454)||(37867752-37867873)
chr2 (334-454)||(4829461-4829581)
chr2 (343-435)||(7490204-7490296)
chr2 (343-454)||(42246587-42246698)
chr2 (331-405)||(7037011-7037085)
chr2 (290-335)||(25570790-25570835)
chr2 (186-265)||(10367461-10367541)
chr2 (338-410)||(12852926-12852998)
chr2 (343-454)||(6706922-6707033)
chr2 (395-454)||(8538686-8538745)
chr2 (360-454)||(12854130-12854224)
chr2 (338-400)||(23177724-23177786)
chr2 (338-400)||(23588981-23589043)
chr2 (378-452)||(33553409-33553483)
chr2 (338-431)||(2581822-2581915)
chr2 (341-410)||(12958456-12958525)
chr2 (354-434)||(35801065-35801145)
chr2 (281-335)||(7037117-7037171)
chr2 (368-454)||(7038366-7038452)
chr2 (344-410)||(11386664-11386730)
chr2 (281-335)||(11575397-11575451)
chr2 (281-335)||(12959616-12959670)
chr2 (378-440)||(20630715-20630777)
chr2 (338-428)||(21012084-21012174)
chr2 (333-434)||(37869039-37869140)
chr2 (338-438)||(1624980-1625079)
chr2 (338-434)||(8537028-8537124)
chr2 (354-438)||(10367251-10367335)
chr2 (354-438)||(12959725-12959809)
chr2 (338-434)||(23178886-23178982)
chr2 (338-434)||(23590143-23590239)
chr2 (281-337)||(29424523-29424579)
chr2 (334-405)||(29424612-29424683)
chr2 (371-434)||(41795989-41796052)
chr2 (367-454)||(42772434-42772521)
chr2 (356-410)||(2305580-2305634)
chr2 (281-335)||(3528176-3528230)
chr2 (281-335)||(10367390-10367444)
chr2 (281-335)||(12853037-12853091)
chr2 (281-327)||(23232330-23232376)
chr2 (394-440)||(30178555-30178601)
chr2 (281-335)||(37868951-37869005)
chr2 (215-321)||(42249629-42249735)
chr2 (333-434)||(32614401-32614502)
chr2 (338-391)||(40174768-40174821)
chr2 (186-265)||(12959519-12959599)
chr2 (338-410)||(15650481-15650553)
chr2 (354-434)||(35799528-35799608)
[»] scaffold0098 (2 HSPs)
scaffold0098 (334-454)||(42346-42465)
scaffold0098 (389-452)||(40914-40977)
[»] chr4 (82 HSPs)
chr4 (334-454)||(6138993-6139113)
chr4 (334-454)||(50531756-50531876)
chr4 (338-454)||(44159081-44159197)
chr4 (337-454)||(41348235-41348352)
chr4 (334-454)||(34438402-34438522)
chr4 (338-454)||(34439664-34439780)
chr4 (338-454)||(38417549-38417665)
chr4 (343-454)||(43419384-43419495)
chr4 (334-434)||(50530519-50530619)
chr4 (363-454)||(41349554-41349645)
chr4 (343-454)||(17319038-17319149)
chr4 (338-452)||(38419021-38419135)
chr4 (338-454)||(33377368-33377484)
chr4 (378-454)||(11482792-11482868)
chr4 (338-405)||(5687220-5687287)
chr4 (399-454)||(44160475-44160530)
chr4 (226-335)||(6140216-6140325)
chr4 (341-454)||(11113738-11113851)
chr4 (345-434)||(26393138-26393227)
chr4 (378-454)||(43418029-43418105)
chr4 (391-454)||(26045128-26045191)
chr4 (391-454)||(47573701-47573764)
chr4 (343-454)||(56000283-56000394)
chr4 (338-436)||(15787506-15787604)
chr4 (338-452)||(30683031-30683145)
chr4 (345-454)||(11114991-11115100)
chr4 (353-454)||(15786948-15787049)
chr4 (374-434)||(5417320-5417380)
chr4 (338-454)||(37558994-37559110)
chr4 (378-454)||(43708832-43708908)
chr4 (334-454)||(47668597-47668717)
chr4 (343-410)||(28103495-28103562)
chr4 (280-334)||(26393037-26393091)
chr4 (338-432)||(44304983-44305077)
chr4 (378-452)||(50498016-50498090)
chr4 (289-335)||(50530654-50530700)
chr4 (338-410)||(5688641-5688713)
chr4 (342-454)||(27408759-27408871)
chr4 (354-410)||(29663683-29663738)
chr4 (334-454)||(29834432-29834552)
chr4 (338-454)||(37560303-37560419)
chr4 (378-454)||(43709918-43709993)
chr4 (338-454)||(46796030-46796146)
chr4 (378-434)||(47242968-47243024)
chr4 (378-454)||(47572583-47572658)
chr4 (378-454)||(50496991-50497067)
chr4 (343-438)||(21104319-21104414)
chr4 (343-434)||(55953861-55953952)
chr4 (338-400)||(307809-307871)
chr4 (280-334)||(3533518-3533572)
chr4 (338-432)||(17494145-17494239)
chr4 (281-335)||(44302871-44302925)
chr4 (341-403)||(48206207-48206269)
chr4 (343-405)||(55952870-55952932)
chr4 (280-334)||(56000439-56000493)
chr4 (331-392)||(31712503-31712564)
chr4 (338-410)||(1273437-1273509)
chr4 (338-454)||(6616215-6616331)
chr4 (338-454)||(38370278-38370394)
chr4 (338-410)||(40146627-40146699)
chr4 (338-454)||(44128338-44128454)
chr4 (280-332)||(56296347-56296399)
chr4 (281-328)||(1794574-1794621)
chr4 (343-434)||(3533617-3533708)
chr4 (285-328)||(35350021-35350064)
chr4 (285-328)||(39057680-39057723)
chr4 (391-454)||(47244047-47244110)
chr4 (281-327)||(2293436-2293482)
chr4 (341-387)||(6140367-6140413)
chr4 (281-335)||(29687889-29687943)
chr4 (338-392)||(33376276-33376330)
chr4 (281-335)||(38418928-38418982)
chr4 (338-387)||(26788585-26788634)
chr4 (288-337)||(35787945-35787994)
chr4 (373-454)||(38371844-38371925)
chr4 (359-400)||(44302770-44302811)
chr4 (369-454)||(56001303-56001388)
chr4 (391-454)||(26059842-26059903)
chr4 (354-454)||(31711088-31711188)
chr4 (281-337)||(39592200-39592256)
chr4 (378-454)||(48413595-48413671)
chr4 (354-454)||(52658907-52659007)
[»] scaffold0122 (4 HSPs)
scaffold0122 (150-335)||(16096-16283)
scaffold0122 (337-454)||(17163-17280)
scaffold0122 (389-454)||(15946-16011)
scaffold0122 (12-103)||(16323-16419)
[»] chr8 (95 HSPs)
chr8 (147-335)||(13366827-13367015)
chr8 (343-454)||(8095343-8095453)
chr8 (338-454)||(13367054-13367170)
chr8 (334-454)||(22621134-22621254)
chr8 (363-454)||(22619891-22619982)
chr8 (145-335)||(8095497-8095690)
chr8 (341-454)||(34617202-34617315)
chr8 (341-433)||(20308622-20308714)
chr8 (341-433)||(21095255-21095347)
chr8 (364-454)||(34616125-34616215)
chr8 (334-434)||(2421293-2421393)
chr8 (334-454)||(37276243-37276363)
chr8 (343-434)||(24069455-24069546)
chr8 (354-452)||(41522708-41522806)
chr8 (338-454)||(8096549-8096665)
chr8 (374-454)||(22913188-22913268)
chr8 (334-433)||(39220696-39220795)
chr8 (378-454)||(9190486-9190561)
chr8 (338-454)||(36940037-36940153)
chr8 (338-454)||(38591011-38591127)
chr8 (343-410)||(36070218-36070285)
chr8 (343-454)||(43275746-43275857)
chr8 (281-335)||(44606290-44606344)
chr8 (340-453)||(45195810-45195922)
chr8 (378-454)||(9189390-9189466)
chr8 (382-454)||(35463037-35463109)
chr8 (334-434)||(41866910-41867010)
chr8 (190-335)||(2421111-2421258)
chr8 (391-454)||(12818750-12818813)
chr8 (334-433)||(36071378-36071477)
chr8 (391-453)||(23768542-23768604)
chr8 (338-400)||(37274937-37274999)
chr8 (338-435)||(31625388-31625485)
chr8 (374-454)||(22914230-22914310)
chr8 (338-454)||(24068326-24068442)
chr8 (338-454)||(31623902-31624018)
chr8 (338-454)||(39546681-39546797)
chr8 (378-434)||(41521333-41521389)
chr8 (362-454)||(43386730-43386822)
chr8 (395-454)||(2419870-2419929)
chr8 (391-454)||(12820155-12820218)
chr8 (341-432)||(19914913-19915004)
chr8 (292-335)||(36070329-36070372)
chr8 (189-335)||(19913643-19913789)
chr8 (280-334)||(24069356-24069410)
chr8 (382-432)||(35462685-35462735)
chr8 (289-335)||(35944059-35944105)
chr8 (338-436)||(38789064-38789162)
chr8 (341-438)||(7796815-7796911)
chr8 (333-454)||(29738287-29738408)
chr8 (341-410)||(29739650-29739719)
chr8 (338-454)||(35943903-35944020)
chr8 (341-434)||(43277928-43278021)
chr8 (338-434)||(117064-117160)
chr8 (378-454)||(4534030-4534106)
chr8 (338-410)||(7486117-7486189)
chr8 (378-434)||(16346115-16346171)
chr8 (338-434)||(16363816-16363912)
chr8 (382-454)||(31872852-31872924)
chr8 (338-454)||(41867920-41868036)
chr8 (341-436)||(7770905-7770999)
chr8 (341-436)||(7816096-7816190)
chr8 (343-454)||(35945446-35945557)
chr8 (339-454)||(38589817-38589931)
chr8 (280-334)||(7770808-7770862)
chr8 (280-334)||(7796718-7796772)
chr8 (280-334)||(7815999-7816053)
chr8 (280-330)||(34617105-34617155)
chr8 (281-335)||(37324599-37324653)
chr8 (290-335)||(20308756-20308801)
chr8 (290-335)||(21095389-21095434)
chr8 (341-434)||(39515215-39515308)
chr8 (281-337)||(21961972-21962028)
chr8 (334-433)||(31871409-31871511)
chr8 (338-454)||(36756060-36756176)
chr8 (281-328)||(6397943-6397990)
chr8 (281-328)||(13513578-13513625)
chr8 (281-328)||(13603111-13603158)
chr8 (148-183)||(44606450-44606485)
chr8 (281-335)||(10052255-10052309)
chr8 (285-327)||(30674010-30674052)
chr8 (281-327)||(31871547-31871593)
chr8 (281-327)||(32552457-32552503)
chr8 (186-271)||(36070397-36070483)
chr8 (281-335)||(37276154-37276208)
chr8 (281-335)||(37472554-37472607)
chr8 (281-327)||(39173277-39173323)
chr8 (280-334)||(39515351-39515405)
chr8 (69-98)||(10052540-10052569)
chr8 (349-410)||(14820233-14820294)
chr8 (343-400)||(37472453-37472510)
chr8 (344-452)||(4807364-4807472)
chr8 (71-103)||(13366755-13366787)
chr8 (346-410)||(44606179-44606243)
chr8 (338-434)||(45194499-45194595)
[»] chr7 (65 HSPs)
chr7 (335-454)||(4167447-4167566)
chr7 (334-454)||(10257388-10257506)
chr7 (334-454)||(35315222-35315342)
chr7 (354-454)||(132019-132119)
chr7 (341-432)||(10256141-10256232)
chr7 (333-454)||(46457066-46457187)
chr7 (333-452)||(25154935-25155054)
chr7 (343-454)||(27899223-27899334)
chr7 (356-434)||(4168871-4168949)
chr7 (378-454)||(35483569-35483646)
chr7 (338-410)||(26406165-26406237)
chr7 (338-454)||(43006381-43006497)
chr7 (338-434)||(46674938-46675034)
chr7 (343-454)||(13287003-13287114)
chr7 (343-454)||(19278349-19278460)
chr7 (341-432)||(24873604-24873695)
chr7 (359-452)||(35484335-35484428)
chr7 (378-454)||(40881087-40881163)
chr7 (378-454)||(47537084-47537160)
chr7 (391-454)||(29344160-29344223)
chr7 (289-335)||(10256274-10256320)
chr7 (382-432)||(29409286-29409336)
chr7 (333-410)||(46458712-46458789)
chr7 (354-454)||(25153654-25153754)
chr7 (334-434)||(43930335-43930435)
chr7 (378-454)||(47927375-47927451)
chr7 (347-454)||(4858357-4858464)
chr7 (343-453)||(19279621-19279731)
chr7 (346-432)||(22746332-22746418)
chr7 (281-335)||(25154847-25154901)
chr7 (338-391)||(13446662-13446715)
chr7 (374-439)||(33071678-33071743)
chr7 (341-454)||(34557393-34557506)
chr7 (341-454)||(36702773-36702886)
chr7 (369-453)||(18802424-18802508)
chr7 (338-434)||(22061799-22061895)
chr7 (338-454)||(22744742-22744858)
chr7 (378-454)||(37781953-37782029)
chr7 (338-433)||(22060480-22060575)
chr7 (394-432)||(29408264-29408302)
chr7 (344-414)||(45719651-45719721)
chr7 (369-434)||(27897708-27897773)
chr7 (339-400)||(35127860-35127921)
chr7 (347-400)||(43935235-43935288)
chr7 (378-454)||(12631879-12631953)
chr7 (186-261)||(46458526-46458602)
chr7 (378-454)||(47928474-47928550)
chr7 (285-328)||(10957067-10957110)
chr7 (363-434)||(17288249-17288320)
chr7 (334-433)||(41516344-41516443)
chr7 (188-321)||(131816-131950)
chr7 (378-432)||(29345122-29345176)
chr7 (343-389)||(36702959-36703005)
chr7 (281-335)||(46458624-46458678)
chr7 (348-410)||(48671118-48671179)
chr7 (304-337)||(14109005-14109038)
chr7 (304-337)||(14418962-14418995)
chr7 (369-454)||(18801211-18801296)
chr7 (369-410)||(19848869-19848910)
chr7 (347-400)||(43007662-43007715)
chr7 (281-337)||(4167600-4167656)
chr7 (354-434)||(4857217-4857297)
chr7 (354-454)||(33458306-33458405)
chr7 (354-434)||(40926539-40926619)
chr7 (369-437)||(45721801-45721869)
[»] chr6 (36 HSPs)
chr6 (338-454)||(14328778-14328893)
chr6 (338-454)||(14421788-14421903)
chr6 (343-453)||(14326150-14326260)
chr6 (343-453)||(14419160-14419270)
chr6 (364-454)||(13800027-13800117)
chr6 (378-454)||(1757538-1757614)
chr6 (338-434)||(22299907-22300003)
chr6 (387-449)||(16269821-16269883)
chr6 (145-261)||(14327201-14327316)
chr6 (145-261)||(14420211-14420326)
chr6 (338-452)||(27438788-27438902)
chr6 (343-432)||(31740281-31740370)
chr6 (394-454)||(5693647-5693707)
chr6 (338-454)||(8412320-8412436)
chr6 (338-454)||(27440179-27440295)
chr6 (338-454)||(31738359-31738475)
chr6 (223-335)||(293494-293605)
chr6 (338-454)||(9927602-9927717)
chr6 (338-454)||(18139491-18139607)
chr6 (186-265)||(31738585-31738665)
chr6 (354-434)||(33807705-33807785)
chr6 (343-392)||(22298662-22298711)
chr6 (361-454)||(33802044-33802137)
chr6 (378-454)||(27107177-27107253)
chr6 (391-439)||(27108231-27108279)
chr6 (378-454)||(27148983-27149059)
chr6 (391-439)||(27150028-27150076)
chr6 (379-454)||(1692070-1692145)
chr6 (343-454)||(5311275-5311386)
chr6 (338-437)||(8411099-8411198)
chr6 (300-335)||(14328704-14328739)
chr6 (300-335)||(14421714-14421749)
chr6 (12-113)||(14327063-14327169)
chr6 (12-113)||(14420073-14420179)
chr6 (391-438)||(1693038-1693085)
chr6 (281-331)||(24757040-24757090)
[»] scaffold0166 (2 HSPs)
scaffold0166 (354-434)||(4238-4318)
scaffold0166 (289-335)||(4127-4173)
[»] scaffold1974 (1 HSPs)
scaffold1974 (338-454)||(632-748)
[»] scaffold1878 (1 HSPs)
scaffold1878 (338-454)||(526-642)
[»] scaffold0290 (2 HSPs)
scaffold0290 (338-454)||(9482-9598)
scaffold0290 (338-434)||(8395-8491)
[»] scaffold0003 (2 HSPs)
scaffold0003 (338-452)||(48460-48574)
scaffold0003 (338-454)||(47066-47182)
[»] scaffold0041 (1 HSPs)
scaffold0041 (378-454)||(85120-85196)
[»] scaffold0013 (1 HSPs)
scaffold0013 (341-454)||(96156-96269)
[»] scaffold0046 (1 HSPs)
scaffold0046 (362-454)||(23402-23494)
[»] scaffold0009 (2 HSPs)
scaffold0009 (378-454)||(205596-205672)
scaffold0009 (392-454)||(204532-204593)
[»] scaffold0178 (1 HSPs)
scaffold0178 (343-454)||(2274-2385)
[»] scaffold0007 (1 HSPs)
scaffold0007 (338-453)||(145873-145988)
[»] scaffold0084 (1 HSPs)
scaffold0084 (356-434)||(13226-13304)
[»] scaffold0051 (2 HSPs)
scaffold0051 (338-400)||(22177-22239)
scaffold0051 (281-335)||(39812-39866)
[»] scaffold0025 (2 HSPs)
scaffold0025 (354-434)||(56720-56800)
scaffold0025 (281-337)||(56611-56667)
[»] scaffold0015 (1 HSPs)
scaffold0015 (281-337)||(207709-207765)
[»] scaffold2127 (1 HSPs)
scaffold2127 (338-405)||(519-586)
[»] scaffold2071 (1 HSPs)
scaffold2071 (281-328)||(589-636)


Alignment Details
Target: chr1 (Bit Score: 142; Significance: 2e-74; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 145 - 338
Target Start/End: Complemental strand, 40811593 - 40811400
Alignment:
Q  145 aagatgatgaataaagatgagagttttatttggagatgatttagggaagatgatggaggaaaaaattaagggttgttattcattataagttacaatagat 244  Q
    |||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40811593 aagatgattattaaagatgagacttttatttggagatgatttagggaagatgatggaggaaaaaattaggggttgttattcattataagttacaatagat 40811494  T
Q  245 ttctccttgatccaacggtctttatttnnnnnnnntatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaacag 338  Q
     ||||||||||||||||||||| ||||        ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40811493 ctctccttgatccaacggtcttcatttaaaaaaaatatcaaacggttaaaaataaaagatttaataaggtctatggtggaccacctataaacag 40811400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 40811307 - 40811192
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||    
T  40811307 gagatgaccaaaataataaacggcaaaagagttatgggatcaaattgagacatttaatagttaagggatcaaactgagaaaatagaataagttaagggac 40811208  T
Q  438 cggaggatgtattaag 453  Q
    ||  ||||||||||||    
T  40811207 cgagggatgtattaag 40811192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 36511335 - 36511451
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||||| |||||| ||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||| ||    
T  36511335 gagatgaccaaaatagtaaacgacagaagatttatgggaccaaattgagacactttatagttaagggaccaaactgagaaaataaaataaattaagggac 36511434  T
Q  438 cggaggatgtattaagc 454  Q
     || |||||||||||||    
T  36511435 tgggggatgtattaagc 36511451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 334 - 454
Target Start/End: Original strand, 40110652 - 40110772
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||| ||||| | |||||||| |  ||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  40110652 aacagagaggaccacattaataaacagaggaagacttatgggaccaaattgacacacttaatagttaagggatcaaactgagaaaataaaataagttaag 40110751  T
Q  434 gaaccggaggatgtattaagc 454  Q
    | | ||  |||||||||||||    
T  40110752 ggatcgagggatgtattaagc 40110772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 351 - 454
Target Start/End: Complemental strand, 24516433 - 24516330
Alignment:
Q  351 taataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtatt 450  Q
    ||||||||||  ||||| ||||| || |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||    
T  24516433 taataaacggaggaagacttatgagaccaaattgacacacttaatagttaagggatcaaactcagaaaataaaataagttaagggaccgggggatgtatt 24516334  T
Q  451 aagc 454  Q
    ||||    
T  24516333 aagc 24516330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 40811727 - 40811626
Alignment:
Q  12 agagagggagaatgagaatgtttgtttttaggaatgattctgatagtaannnnnnnnaagaatgttaaggaaaatgaaaggaagatgatgattatagtag 111  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||    
T  40811727 agagagggagaatgagaatgtttttttttag-aatgattctgatagtaattttttttaagaatgttaaggaaaatgaaaggaagatgatgattatagtag 40811629  T
Q  112 taa 114  Q
    |||    
T  40811628 taa 40811626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 344 - 453
Target Start/End: Complemental strand, 36509917 - 36509809
Alignment:
Q  344 accaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggagg 443  Q
    ||||||||| |||||||||||||| |||||| | |||||||| |||||| |||||||||||| |||||||||||||||||||||||||||| | | ||||    
T  36509917 accaaaatagtaaacggcagaagatttatggaaccaaattgaaacactttatagttaagggaccaaactgagaaaataaaataagttaagggatc-gagg 36509819  T
Q  444 atgtattaag 453  Q
    ||||||||||    
T  36509818 atgtattaag 36509809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 14765098 - 14765214
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||| ||||| ||||| ||| || | |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||| | ||    
T  14765098 gagaggaccgaaatagtaaactgcaaaaaatttatgggaccaaattgacacacttaatagttaagggaccaaactgagaaaataaaataagttaaaggac 14765197  T
Q  438 cggaggatgtattaagc 454  Q
    ||||| |||||||||||    
T  14765198 cggagaatgtattaagc 14765214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 19464712 - 19464596
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||||| |||||||||||||| || ||| | |||||||| |||||| ||| |||||||| |||||||| |||||||||||||||| |||||    
T  19464712 gagatgaccaaaatagtaaacggcagaagatttgtggaaccaaattgaaacactttataattaagggaccaaactgaaaaaataaaataagttacggaac 19464613  T
Q  438 cggaggatgtattaagc 454  Q
     || |||||||||||||    
T  19464612 tggtggatgtattaagc 19464596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 334 - 434
Target Start/End: Complemental strand, 22167895 - 22167795
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    ||||||||  |||||||||||||||||||||||| |||||||| |||||||| |||||||||| ||||||||  ||||||||||| ||||||||||||||    
T  22167895 aacagagagaaccaaaataataaacggcagaagatttatgggaccaaattgaaacacttaatatttaagggactaaactgagaaattaaaataagttaag 22167796  T
Q  434 g 434  Q
    |    
T  22167795 g 22167795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 331 - 454
Target Start/End: Complemental strand, 51725462 - 51725339
Alignment:
Q  331 ataaacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagtt 430  Q
    |||||| || ||||||||||| |||||||||||||   |||| ||||||||||||||||||| |||||||| |||  ||||||||||| |||||||||||    
T  51725462 ataaacggacatgaccaaaatgataaacggcagaaattttataggatcaaattgagacactttatagttaaaggactaaactgagaaattaaaataagtt 51725363  T
Q  431 aaggaaccggaggatgtattaagc 454  Q
    |||| ||||| |||| ||||||||    
T  51725362 aagggaccgggggatatattaagc 51725339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 347 - 454
Target Start/End: Original strand, 51726857 - 51726964
Alignment:
Q  347 aaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatg 446  Q
    |||||| |||||| ||||||| |||||| | ||||||||||||||| ||||||||  || |||||||||||||||||||||||||||| ||||| |||||    
T  51726857 aaaatagtaaacgacagaagatttatggaaccaaattgagacactttatagttaaatgaccaaactgagaaaataaaataagttaagggaccgggggatg 51726956  T
Q  447 tattaagc 454  Q
    ||||||||    
T  51726957 tattaagc 51726964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 334 - 454
Target Start/End: Original strand, 40812611 - 40812729
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||| | |||||||||| |||| ||||||||||||||   | |||||||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  40812611 aacagaaaagaccaaaatagtaaatggcagaagagttatataaccaaattgagacacttaatagttaagggaccaaactaggaaaataaaataagttaag 40812710  T
Q  434 gaaccggaggatgtattaagc 454  Q
    | ||||  |||||||||||||    
T  40812711 ggaccg--ggatgtattaagc 40812729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 334 - 454
Target Start/End: Complemental strand, 14169735 - 14169615
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||| | |||||||||| |||||| || |||| |||||||| |||||||||||| || |||||||| ||| |||||||||||||||||||||||||||    
T  14169735 aacagataagaccaaaatagtaaacgacaaaagatttatgggaccaaattgagacattttatagttaaaggaccaaactgagaaaataaaataagttaag 14169636  T
Q  434 gaaccggaggatgtattaagc 454  Q
    | || || | |||||||||||    
T  14169635 ggactggggaatgtattaagc 14169615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 354 - 454
Target Start/End: Complemental strand, 40109457 - 40109357
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 453  Q
    |||||||  ||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||    
T  40109457 taaacggatgaagatttatgggaccaaattgacacacttaaaagttaagggatcaaactgagaaaataaaataagttaagggatcgtgggatgtattaag 40109358  T
Q  454 c 454  Q
    |    
T  40109357 c 40109357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 369 - 451
Target Start/End: Original strand, 26803251 - 26803333
Alignment:
Q  369 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtatta 451  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| | ||||||||    
T  26803251 ttatggaatcaaattgacacacttaatagttaagagatcaaactgagaaaataaaataagttaagggaccggggaatgtatta 26803333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 51726700 - 51726809
Alignment:
Q  227 ttataagttacaatagatttctccttgatccaacggtctttatttnnnnnnnntatcaaatggttaaaa-ataaaagatttaataaggtctatggtggac 325  Q
    ||||||| || ||||||| |||||||||||||||||||| |||||        ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  51726700 ttataagctataatagatctctccttgatccaacggtctctatttaaaaagagtatcaaacggttaaaaaataaaagatttaataaggtctatggtggac 51726799  T
Q  326 cacctataaa 335  Q
    ||||||||||    
T  51726800 cacctataaa 51726809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 344 - 434
Target Start/End: Original strand, 19466215 - 19466305
Alignment:
Q  344 accaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||| |||| |||||| ||||||| |||||||| ||||||||||||||| |||||||| ||| ||||||||||||||||||||||| ||||    
T  19466215 accacaatagtaaacgacagaagatttatgggaccaaattgagacactttatagttaaaggaccaaactgagaaaataaaataagtaaagg 19466305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 363 - 453
Target Start/End: Original strand, 24517643 - 24517733
Alignment:
Q  363 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 453  Q
    ||||| |||||||| |||||||| |||||||| | ||||||||| ||||||||||||||||||||||||||| ||||  ||||||||||||    
T  24517643 gaagatttatgggaccaaattgacacacttaaaaattaagggattaaactgagaaaataaaataagttaagggaccgtgggatgtattaag 24517733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 354 - 454
Target Start/End: Complemental strand, 8092694 - 8092594
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 453  Q
    |||||||  ||||| |||||| | |||||||| |||||||||||||||||||  | ||||||||||||||||||||||||| |||||  |||||||||||    
T  8092694 taaacggaggaagatttatggaaccaaattgatacacttaatagttaagggactacactgagaaaataaaataagttaagggaccgggagatgtattaag 8092595  T
Q  454 c 454  Q
    |    
T  8092594 c 8092594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 13641369 - 13641273
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   ||||||||||||||    
T  13641369 gagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagg 13641273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 334 - 434
Target Start/End: Complemental strand, 14764345 - 14764245
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||||||| |||| | |||||| ||||||| ||||| || |||||| | |||||||||| ||||||||||||||| | ||||||||||||||||||    
T  14764345 aacagagatgactaaaacagtaaacgacagaagacttatgagaccaaattaacacacttaataattaagggatcaaactaaaaaaataaaataagttaag 14764246  T
Q  434 g 434  Q
    |    
T  14764245 g 14764245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 334 - 454
Target Start/End: Complemental strand, 25786084 - 25785964
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||| ||||||||||||||||| || |||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||    
T  25786084 aacagagaggaccaaaataataaacgacataagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaag 25785985  T
Q  434 gaaccggaggatgtattaagc 454  Q
    | |||  | ||||||||||||    
T  25785984 ggaccaaatgatgtattaagc 25785964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 354 - 454
Target Start/End: Complemental strand, 26802039 - 26801939
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 453  Q
    |||||||  ||||| ||||| ||  ||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||  ||||||||||||||||||    
T  26802039 taaacggaggaagacttatgagactaaatttacacacttaatagttaagggatcaaactgaaaaaataaaataagctaagagaccggaggatgtattaag 26801940  T
Q  454 c 454  Q
    |    
T  26801939 c 26801939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 369 - 454
Target Start/End: Complemental strand, 38280931 - 38280846
Alignment:
Q  369 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||| || |||||||| ||| ||||||||||| ||| ||||||||||||||||||||| |||| | |||||||||||||||||||    
T  38280931 ttatgtgaccaaattgacacaattaatagttaatggaccaaactgagaaaataaaataacttaaaggaccggaggatgtattaagc 38280846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 3978156 - 3978040
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| |||||| ||||||| |||||||||||||||||||||||| |||||||| ||| |||| ||| |    |||||||||||||| ||    
T  3978156 gagaggaccaaaatagtaaacgacagaagaattatgggatcaaattgagacactttatagttaaaggaccaaaatgaaattcaaaaataagttaagggac 3978057  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  3978056 caaatgatgtattaagc 3978040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 338 - 410
Target Start/End: Original strand, 3979317 - 3979389
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||| |||||||||| |||||||||||||| |||||||| ||||||||||||||| |||||||||||| ||||    
T  3979317 gagaggaccaaaatagtaaacggcagaagaattatgggaccaaattgagacactttatagttaagggaccaaa 3979389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 150 - 335
Target Start/End: Complemental strand, 22168103 - 22167924
Alignment:
Q  150 gatgaataaagatgagagttttatttggagatgatttagggaagatgatggaggaaaaaattaagggtt-gttattcattataagttacaatagatttct 248  Q
    |||||||||||||||||||||||||||| |||||        ||| |||||||||||| |||| | ||| ||  ||||||||||  |||||||||| |||    
T  22168103 gatgaataaagatgagagttttatttggggatga--------agaagatggaggaaaatattaggtgtttgtggttcattataaactacaatagatctct 22168012  T
Q  249 ccttgatccaacggtctttatttnnnnnnnnt-atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    | ||||||||| |||||  ||||          ||||||  ||||||||||||||||||||||||||||||||||||||| |||||||    
T  22168011 cattgatccaatggtctccatttaaaaaaaaagatcaaaccgttaaaaataaaagatttaataaggtctatggtggaccatctataaa 22167924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 452
Target Start/End: Complemental strand, 45570409 - 45570317
Alignment:
Q  359 ggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 452  Q
    ||||||||||||||| || ||| |||||||| || |||||||||| | |||||||| ||||||||||||||||||| |||||| |||| |||||    
T  45570409 ggcagaagagttatgagaccaagttgagacatttgatagttaaggaaccaaactga-aaaataaaataagttaagggaccggatgatgcattaa 45570317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 43808565 - 43808641
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||  ||||||||||||||| || ||||||||| ||||||||||||||| |||| ||||||||||||||    
T  43808565 caaattgaaacgtttaatagttaagggaccacactgagaaattaaaataagttaagggaccgaaggatgtattaagc 43808641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 292 - 335
Target Start/End: Complemental strand, 21277188 - 21277145
Alignment:
Q  292 aaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  21277188 aaaaataaaagatttaataaggtctatggtggaccacctataaa 21277145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 453
Target Start/End: Complemental strand, 13929402 - 13929292
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||| || |||||||| |||||| ||| |||| ||||||||||||||| |||||||||||| |||| ||| ||   |||||||||||||| |||  |     
T  13929402 gaccaagatgataaacggaagaagatttacgggaccaaattgagacactttatagttaagggaccaaattgaaaaccaaaaataagttaagggaccaaat 13929303  T
Q  443 gatgtattaag 453  Q
    |||||||||||    
T  13929302 gatgtattaag 13929292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 391 - 453
Target Start/End: Original strand, 21246532 - 21246594
Alignment:
Q  391 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 453  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| |||||  |||||||||||    
T  21246532 ttaatagttaagggaccaaactgagaaattaaaataagttaagggaccgggagatgtattaag 21246594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 378 - 452
Target Start/End: Complemental strand, 43807507 - 43807433
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 452  Q
    |||||||| ||| ||||||||||| |||  ||||||||||| ||||||||||||| | |||||||||||||||||    
T  43807507 caaattgaaacatttaatagttaatggactaaactgagaaattaaaataagttaaaggaccggaggatgtattaa 43807433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 25787168 - 25787284
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| |||| |||| |||| ||||| || ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| ||    
T  25787168 gagaggaccaaaatagtaaatggcataagatttatgagaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggac 25787267  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  25787268 caaatgatgtattaagc 25787284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 47411096 - 47410980
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||||| |||||| || |||| ||||| || ||||||||||||||| ||||||| ||||||||| ||| ||   ||||||| |||||| ||    
T  47411096 gagatgaccaaaatagtaaacgacataagatttatgagaccaaattgagacactttatagttaggggatcaaattgaaaatcaaaaataatttaagggac 47410997  T
Q  438 cggaggatgtattaagc 454  Q
    |  |  |||||||||||    
T  47410996 caaattatgtattaagc 47410980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 26056151 - 26056266
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| |||||| || |||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| |    |||||||||||||| ||    
T  26056151 gagaggaccaaaatagtaaacgacaaaagatttatgggaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaaataagttaagggac 26056250  T
Q  438 cggaggatgtattaag 453  Q
    |  || ||||||||||    
T  26056251 caaagtatgtattaag 26056266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 408
Target Start/End: Original strand, 16218482 - 16218552
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatca 408  Q
    ||||||||||||||| |||||| || |||| |||||||| |||||||||| |||| ||||||| |||||||    
T  16218482 gagatgaccaaaatattaaacgacataagatttatgggaccaaattgagatactttatagttaggggatca 16218552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 21277349 - 21277263
Alignment:
Q  186 tagggaagatgatggaggaaaaaattaagggtt-gttattcattataagttacaatagatttctccttgatccaacggtctttattt 271  Q
    ||||||||| ||||||||||||||||| | ||| ||  ||||||||||||||||||||||| |||| | || ||||||||| |||||    
T  21277349 tagggaagaagatggaggaaaaaattaggtgtttgtggttcattataagttacaatagattcctccataattcaacggtctctattt 21277263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 13642566 - 13642615
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacactt 392  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  13642566 gaccaaaattataaacggcagaatagttatgggatcaaactgagacactt 13642615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 452
Target Start/End: Original strand, 22169280 - 22169337
Alignment:
Q  395 tagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 452  Q
    |||||||||||||||||||||||| ||||||||||||||| || ||  ||||||||||    
T  22169280 tagttaagggatcaaactgagaaattaaaataagttaagggactgggagatgtattaa 22169337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 49141500 - 49141569
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatc 407  Q
    |||||||| |||||  |||||||||||| | |||||||| ||| |||| |||||||||||||||||||||    
T  49141500 gagatgactaaaatggtaaacggcagaaaaattatgggaccaatttgaaacacttaatagttaagggatc 49141569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 30743159 - 30743083
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||| ||||||||||||||| || | ||||||| ||||||||||||| | |||||  ||||||||||||    
T  30743159 caaattgaaacatttaatagttaagggaccacattgagaaattaaaataagttaaaggaccgggagatgtattaagc 30743083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 454
Target Start/End: Original strand, 47411460 - 47411568
Alignment:
Q  346 caaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggat 445  Q
    ||||||| ||||||||| |||| |||||||| ||||||||||||||| ||||||| || | ||||  || ||   |||||||||||||| |||  | |||    
T  47411460 caaaatagtaaacggcataagatttatgggaccaaattgagacactttatagttagggaaccaaatggaaaaccgaaaataagttaagggaccaaatgat 47411559  T
Q  446 gtattaagc 454  Q
    |||||||||    
T  47411560 gtattaagc 47411568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 47560251 - 47560135
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||| | |||||||||||| | |||  |||||||||||| |||||| ||||||| |||| |||| ||| ||   |||||||| ||||| ||    
T  47560251 gagatgaccaaaacagtaaacggcagaatatttaaaggatcaaattgaaacactttatagttaggggaccaaagtgaaaatcgaaaataaggtaagggac 47560152  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  47560151 caaatgatgtattaagc 47560135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 335
Target Start/End: Original strand, 13930489 - 13930640
Alignment:
Q  186 tagggaagatgatggagg-aaaaaattaagggtt-gttattcattataagttacaatagatttctccttgatccaacggtctttatttnnnnnnnntatc 283  Q
    ||||||||| |||||||| ||||||||| | ||| ||  |||| |||||| |||||||||   |||| |||||||||||| || ||||         |||    
T  13930489 tagggaagaagatggagggaaaaaattaggtgtttgtggttcaatataagctacaatagacccctccatgatccaacggttttcattttaagaaatgatc 13930588  T
Q  284 aaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||| ||||||||||| | |||||||||||||||||||| |||||| ||||||    
T  13930589 aaacggttaaaaatatatgatttaataaggtctatggtagaccacatataaa 13930640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 335
Target Start/End: Original strand, 14071018 - 14071169
Alignment:
Q  186 tagggaagatgatggagg-aaaaaattaagggtt-gttattcattataagttacaatagatttctccttgatccaacggtctttatttnnnnnnnntatc 283  Q
    ||||||||| |||||||| ||||||||| | ||| ||  |||| |||||| |||||||||   |||| |||||||||||| || ||||         |||    
T  14071018 tagggaagaagatggagggaaaaaattaggtgtttgtggttcaatataagctacaatagacccctccatgatccaacggttttcattttaagaaatgatc 14071117  T
Q  284 aaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||| ||||||||||| | |||||||||||||||||||| |||||| ||||||    
T  14071118 aaacggttaaaaatatatgatttaataaggtctatggtagaccacatataaa 14071169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 454
Target Start/End: Original strand, 14071212 - 14071323
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||  |||||| ||||||| |||||||| ||||||||||||||| |||||||  ||| |||| ||| ||   ||||||| |||||| |||  |     
T  14071212 gaccaaaatggtaaacgacagaagacttatgggaccaaattgagacactttatagttagaggaccaaattgaaaaccaaaaataaattaagggaccaaat 14071311  T
Q  443 gatgtattaagc 454  Q
    ||||||||||||    
T  14071312 gatgtattaagc 14071323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 400
Target Start/End: Complemental strand, 21277098 - 21277044
Alignment:
Q  346 caaaataataaacggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    ||||||| |||||||||||||| |||||||| |||||||||| |||| |||||||    
T  21277098 caaaatagtaaacggcagaagatttatgggaccaaattgagatactttatagtta 21277044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 434
Target Start/End: Complemental strand, 34653513 - 34653451
Alignment:
Q  372 tgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    ||||||||||||||||||||| |||||||||||| |||| ||| ||   ||||||||||||||    
T  34653513 tgggatcaaattgagacactttatagttaagggaccaaagtgaaaaccgaaaataagttaagg 34653451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 452
Target Start/End: Complemental strand, 45042677 - 45042607
Alignment:
Q  382 ttgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 452  Q
    |||| ||| |||| |||||||||||||||||||||||||||||||| |||| | |||   |||||||||||    
T  45042677 ttgaaacatttaacagttaagggatcaaactgagaaaataaaataaattaaaggaccaacggatgtattaa 45042607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 452
Target Start/End: Complemental strand, 49139913 - 49139799
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||| ||||||||| ||||| || ||||| ||||| || ||||||||||||||| ||||||| |||| ||||  || ||   |||||||||||||| ||    
T  49139913 gagattaccaaaatagtaaactgcggaagatttatgagaccaaattgagacactttatagttatgggaccaaaacgaaaaccaaaaataagttaagggac 49139814  T
Q  438 cggaggatgtattaa 452  Q
    |  | ||||||||||    
T  49139813 caaatgatgtattaa 49139799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 452
Target Start/End: Original strand, 50679841 - 50679939
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 452  Q
    |||||||  ||||| |||||||| ||||||||||||||| |||||||||||| |||| | | ||   |||||||||||||| |||  || |||||||||    
T  50679841 taaacggaggaagacttatgggaccaaattgagacactttatagttaagggaccaaaataaaaactaaaaataagttaagggaccaaagcatgtattaa 50679939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 9592347 - 9592278
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||| ||||||| |||||| || |||| ||||||||||||||||| |||||| ||||||| |||| ||||    
T  9592347 atgatcaaaatagtaaacgacaaaagatttatgggatcaaattgaaacactttatagttaggggaccaaa 9592278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 335
Target Start/End: Complemental strand, 8092781 - 8092749
Alignment:
Q  303 atttaataaggtctatggtggaccacctataaa 335  Q
    |||||||||||||||||||||||||||||||||    
T  8092781 atttaataaggtctatggtggaccacctataaa 8092749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 337
Target Start/End: Complemental strand, 9633980 - 9633924
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaaca 337  Q
    |||||| ||| |||| | ||| |||||||||||||||||||||||||||| ||||||    
T  9633980 atcaaagggtcaaaatttaaaaatttaataaggtctatggtggaccacctttaaaca 9633924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 38283783 - 38283859
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||||||||||| ||  |||  ||||||| ||||||||||||||||||| ||||| |  ||||||||||    
T  38283783 caaattgacacacttaatagatagaggactaaactgaaaaaataaaataagttaagggaccggggagtgtattaagc 38283859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 434
Target Start/End: Original strand, 13930684 - 13930775
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||||  |||||| || |||| |||||||| ||||||||||||||| |||||||  ||| |||| ||| ||   ||||||||||||||    
T  13930684 gaccaaaatggtaaacgacataagacttatgggaccaaattgagacactttatagttagaggaccaaattgaaaaccaaaaataagttaagg 13930775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 405
Target Start/End: Original strand, 47136691 - 47136758
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaaggga 405  Q
    |||| |||||||||| ||||||||| |||| |||||  | ||||||||||||||| ||||||| ||||    
T  47136691 gagaggaccaaaatagtaaacggcataagatttatgacaccaaattgagacactttatagttagggga 47136758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 327
Target Start/End: Original strand, 7306163 - 7306209
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggacca 327  Q
    ||||||||| ||||| ||||||| |||||||| ||||||||||||||    
T  7306163 atcaaatggctaaaattaaaagaattaataagatctatggtggacca 7306209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 14169812 - 14169770
Alignment:
Q  293 aaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||| |||||||| ||||||||||||||||| |||||||||||    
T  14169812 aaaaaaaaagattcaataaggtctatggtgggccacctataaa 14169770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 16217552 - 16217490
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    ||||||||||||||| |||| | || |||| |||| ||| ||||||||||||||| |||||||    
T  16217552 gagatgaccaaaatagtaaatgacataagatttataggaccaaattgagacactttatagtta 16217490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 26056058 - 26056112
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||| ||||| |||||||| || |||||||| ||||||| ||||    
T  26056058 atcaaatggttaaaattaaaaaatttaatacggcctatggtgaaccacctttaaa 26056112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 454
Target Start/End: Complemental strand, 35683149 - 35683051
Alignment:
Q  356 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||||||  || |||| ||||||||||||||| ||||||| |||| |||| ||| |    |||||||||||||| |||  || |||||||||||    
T  35683149 aacggcagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagc 35683051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 50678567 - 50678514
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||| ||||| |||||||| ||||||||||| ||||||| ||||    
T  50678567 atcaaatggttaaaattaaaa-atttaatacggtctatggtgaaccacctttaaa 50678514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 432
Target Start/End: Original strand, 52181309 - 52181403
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    ||||||||||||||| |||||  || |||| ||||| ||  |||||||||||||| |||||||  ||| |||| ||| || | ||||||||||||    
T  52181309 gagatgaccaaaatagtaaacaacataagatttatgagactaaattgagacactttatagttagaggaccaaattgaaaataaaaaataagttaa 52181403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 98
Target Start/End: Complemental strand, 44977656 - 44977627
Alignment:
Q  69 aagaatgttaaggaaaatgaaaggaagatg 98  Q
    ||||||||||||||||||||||||||||||    
T  44977656 aagaatgttaaggaaaatgaaaggaagatg 44977627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 413
Target Start/End: Original strand, 14171275 - 14171347
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactg 413  Q
    |||| ||||||| |||| | |||| || |||||||| |||||||| ||| || ||| ||||||||||||||||    
T  14171275 atgatcaaaatagtaaatgacagatgatttatgggaccaaattgaaacattttataattaagggatcaaactg 14171347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 14390370 - 14390254
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||  ||||||  |||||| |||||| | |||||||||||| || |||||||  ||| |||| ||| |  | |||||||||||||| ||    
T  14390370 gagaggaccaaaatggtaaacgaaagaagatttatggaaccaaattgagacattttatagttagaggaccaaaatgaaattaaaaaataagttaagggac 14390271  T
Q  438 cggaggatgtattaagc 454  Q
    |  || |||||||||||    
T  14390270 caaagcatgtattaagc 14390254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 410
Target Start/End: Original strand, 48935114 - 48935186
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    ||||||||||||| |   ||||||||||||  || |||| ||||||||||||||| ||||||| |||| ||||    
T  48935114 gagatgaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggggaccaaa 48935186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 51300167 - 51300215
Alignment:
Q  280 tatcaaatggttaaaaataaaagatttaataaggtctatggtggaccac 328  Q
    |||||||||||||||| | | | | ||||||||||||||||||||||||    
T  51300167 tatcaaatggttaaaattcataaaattaataaggtctatggtggaccac 51300215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 3e-40; HSPs: 76)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 334 - 454
Target Start/End: Original strand, 32735479 - 32735599
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| |||||| ||||||||||||| ||||||||||||||| ||||||    
T  32735479 aacagagatgaccaaaataataaacggcagaagagttatgggaccaaattaaaacatttaataattaagggatcaaattgagaaaataaaatatgttaag 32735578  T
Q  434 gaaccggaggatgtattaagc 454  Q
    | | |||||||||||||||||    
T  32735579 ggatcggaggatgtattaagc 32735599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 343 - 453
Target Start/End: Original strand, 22819558 - 22819668
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||      
T  22819558 gaccaaaatagtaaacggcagaagagttatgggaccaaattgagacacttaatagttaagggatcaaattgagaaaataaaataagttaaggggccggga 22819657  T
Q  443 gatgtattaag 453  Q
    |||||||||||    
T  22819658 gatgtattaag 22819668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 12830942 - 12831058
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  12830942 gagaggaccaaaatagtaaacagcagaagagttataggaccaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagggac 12831041  T
Q  438 cggaggatgtattaagc 454  Q
    ||   ||||||||||||    
T  12831042 cgagagatgtattaagc 12831058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 12862922 - 12863038
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  12862922 gagaggaccaaaatagtaaacagcagaagagttataggaccaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagagac 12863021  T
Q  438 cggaggatgtattaagc 454  Q
    ||   ||||||||||||    
T  12863022 cgagagatgtattaagc 12863038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 344 - 454
Target Start/End: Complemental strand, 42510220 - 42510110
Alignment:
Q  344 accaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggagg 443  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||||||| |||||||||||| |||||||| |||||||||||| |||||| | | | ||    
T  42510220 accaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaagggaccaaactgaaaaaataaaataaattaagggatcagggg 42510121  T
Q  444 atgtattaagc 454  Q
    |||||||||||    
T  42510120 atgtattaagc 42510110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 341 - 454
Target Start/End: Complemental strand, 32734240 - 32734129
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccgg 440  Q
    |||||||||||| |||||| |||||||||||||||| |||||| |||||| |||||||||||||| |||||||| ||||||||||||||||| | |||||    
T  32734240 atgaccaaaatagtaaacgacagaagagttatgggaccaaattaagacac-taatagttaagggaccaaactgaaaaaataaaataagttaaaggaccgg 32734142  T
Q  441 aggatgtattaagc 454  Q
     |||||||||||||    
T  32734141 -ggatgtattaagc 32734129  T

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Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 338 - 440
Target Start/End: Original strand, 15857622 - 15857724
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||||  |||||| || |||| |||||||| |||||||| |||||| |||||||||||| |||||||||||||||||||||||||||| ||    
T  15857622 gagatgaccaaaatggtaaacgacataagatttatgggaacaaattgaaacactttatagttaagggaccaaactgagaaaataaaataagttaagggac 15857721  T
Q  438 cgg 440  Q
    |||    
T  15857722 cgg 15857724  T

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Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 354 - 434
Target Start/End: Original strand, 24761741 - 24761821
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||    
T  24761741 taaacggcagacgagttatgagatcaaattgagacacttaataattaagggactaaactaagaaaataaaataagttaagg 24761821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 345 - 454
Target Start/End: Original strand, 42511677 - 42511786
Alignment:
Q  345 ccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggagga 444  Q
    ||||||||  ||||||||||||| |||||| | ||||||||||||||| |||||||||||| |||||||| |||||||||||| |||||| ||  | | |    
T  42511677 ccaaaataggaaacggcagaagatttatggaagcaaattgagacactttatagttaagggaccaaactgaaaaaataaaataaattaagggactagggaa 42511776  T
Q  445 tgtattaagc 454  Q
    ||||||||||    
T  42511777 tgtattaagc 42511786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 11907205 - 11907281
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||| ||||||||||||||| |||||||||||| ||||||||||||||| ||||| |||||||||||||    
T  11907205 caaattgaaacatttaatagttaagggaccaaactgagaaattaaaataagttaagggaccgggggatgtattaagc 11907281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 433
Target Start/End: Complemental strand, 40058130 - 40058035
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    ||||||||||||||  |||||||||||||||||||| || ||| |||| |||||||||||||||||||||||| ||| ||   |||||||||||||    
T  40058130 gagatgaccaaaatggtaaacggcagaagagttatgagaccaatttgaaacacttaatagttaagggatcaaaatgaaaaccaaaaataagttaag 40058035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 5384350 - 5384466
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| |||||||  ||||| |||||||| ||||||||||||||| ||||||| ||||||||| ||| ||   ||||||| |||||||||    
T  5384350 gagaggaccaaaatagtaaacggacgaagatttatgggaccaaattgagacactttatagttaggggatcaaattgaaaatcaaaaataaattaaggaac 5384449  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  5384450 caaatgatgtattaagc 5384466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 39135692 - 39135768
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||| ||||||||||||||| |||||||||||| ||||||||||||| | |||||||||| ||||||||    
T  39135692 caaattgaaacatttaatagttaagggagcaaactgagaaattaaaataagttaaaggaccggaggatctattaagc 39135768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 434
Target Start/End: Original strand, 8188229 - 8188300
Alignment:
Q  363 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    ||||| |||| ||| |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||    
T  8188229 gaagacttataggaccaaattgacacacttaatagttaaaggatcaaactgaaaaaataaaataagttaagg 8188300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 150 - 335
Target Start/End: Original strand, 2167301 - 2167480
Alignment:
Q  150 gatgaataaagatgagagttttatttggagatgatttagggaagatgatggaggaaaaaattaagggtt-gttattcattataagttacaatagatttct 248  Q
    |||||||||||||||||||||||||||| || ||        ||| ||||||||||||||||| | ||| ||  ||||||||||  |||||||||| |||    
T  2167301 gatgaataaagatgagagttttatttggggaaga--------agaagatggaggaaaaaattaggtgtttgtggttcattataaactacaatagatctct 2167392  T
Q  249 ccttgatccaacggtctttatttnnnnnnnnta-tcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    | ||||||||| |||||  ||||         | ||||| |||||| ||||||||||||||||||||||||||||||||| |||||||    
T  2167393 cattgatccaatggtctccatttaaaaaaaaaaatcaaacggttaataataaaagatttaataaggtctatggtggaccatctataaa 2167480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 12934011 - 12933902
Alignment:
Q  226 attataagttacaatagatttctccttgatccaacggtctttatttnnnnnnnntatcaaatggttaaaaataaaagatttaataaggtctatggtggac 325  Q
    |||||||||||||||||||  |||| ||||||||||||||| ||||         ||||||  ||||||||| |||||||||||||||| |||||||||     
T  12934011 attataagttacaatagatccctccatgatccaacggtcttcatttataaaaaagatcaaaacgttaaaaatgaaagatttaataaggtttatggtggat 12933912  T
Q  326 cacctataaa 335  Q
    ||||||||||    
T  12933911 cacctataaa 12933902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 12948172 - 12948063
Alignment:
Q  226 attataagttacaatagatttctccttgatccaacggtctttatttnnnnnnnntatcaaatggttaaaaataaaagatttaataaggtctatggtggac 325  Q
    |||||||||||||||||||  |||| ||||||||||||||| ||||         ||||||  ||||||||| |||||||||||||||| |||||||||     
T  12948172 attataagttacaatagatccctccatgatccaacggtcttcatttataaaaaagatcaaaacgttaaaaatgaaagatttaataaggtttatggtggat 12948073  T
Q  326 cacctataaa 335  Q
    ||||||||||    
T  12948072 cacctataaa 12948063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 343 - 452
Target Start/End: Original strand, 22812396 - 22812505
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||| ||||| |||||||| ||||||||||||| ||||||| || ||||||||||||  ||| ||| || | |||||||||||||| |||  |     
T  22812396 gaccaaaatagtaaactgcagaagatttatgggatcaaagtgagacattttatagttaagggactaaaatgaaaataaaaaataagttaagggaccaaat 22812495  T
Q  443 gatgtattaa 452  Q
    ||||||||||    
T  22812496 gatgtattaa 22812505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 434
Target Start/End: Complemental strand, 12933847 - 12933767
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||| ||||||||| ||| ||   ||||||||||||||    
T  12933847 taaacggcagaagacttatgagatcaaattgagacactttatagttaggggatcaaaatgaaaaccaaaaataagttaagg 12933767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 454
Target Start/End: Complemental strand, 18678072 - 18677972
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 453  Q
    |||||| ||||||| |||||||| ||||||||||||||| ||||||| ||||||||| ||| ||   |||||||||||||| |||  | |||||||||||    
T  18678072 taaacgacagaagatttatgggaccaaattgagacactttatagttaggggatcaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaag 18677973  T
Q  454 c 454  Q
    |    
T  18677972 c 18677972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 24070477 - 24070401
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||  |||||||||||||||||| ||||||||| |||||||| |||||| ||||| |||||||||||||    
T  24070477 caaattgaaacgtttaatagttaagggatcacactgagaaattaaaataaattaagggaccgggggatgtattaagc 24070401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 40059332 - 40059428
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    ||||| |||||||| |||||||||||||||||||| ||| ||| || | |||||||||||||| ||||||||| ||| ||   ||||||||||||||    
T  40059332 gagatcaccaaaatgataaacggcagaagagttattggaccaatttaaaacacttaatagttaggggatcaaaatgaaaaccaaaaataagttaagg 40059428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 395 - 454
Target Start/End: Complemental strand, 12861604 - 12861545
Alignment:
Q  395 tagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||||| |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  12861604 tagttaagggaccaaactgagaaaataaaataagttaagggacgagaggatgtattaagc 12861545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 32734391 - 32734292
Alignment:
Q  226 attataagttacaatagatttctccttgatccaacggtctttatttnnnnnnnntatcaaatggttaaaaataaaagatttaataaggtctatggtggac 325  Q
    |||||||| ||||||||||  |||| ||||||||||||||  ||||        |||||||  |||||||||||||||||||||||||||||||||||||    
T  32734391 attataagctacaatagatccctccatgatccaacggtctccattttaaaaaaatatcaaactgttaaaaataaaagatttaataaggtctatggtggac 32734292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 396
Target Start/End: Original strand, 2167515 - 2167576
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaata 396  Q
    |||||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||||||||    
T  2167515 aacagaga-gaccaaaataataaacggcagaagatttatgggaccaaattgaaacacttaata 2167576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 432
Target Start/End: Complemental strand, 26403423 - 26403325
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    |||||||| |||||||||| |||||| || || | ||||| |||||||||||||||||| |||||||||||| |||| ||| ||   ||||||||||||    
T  26403423 aacagagaagaccaaaatagtaaacgacataaaatttatgagatcaaattgagacactttatagttaagggaccaaattgaaaatcaaaaataagttaa 26403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 378 - 452
Target Start/End: Complemental strand, 39134739 - 39134665
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 452  Q
    |||||||| ||  ||||||||||||||| |||||||||||  ||||||||||||||| ||||| |||||||||||    
T  39134739 caaattgaaacgtttaatagttaagggaccaaactgagaatttaaaataagttaagggaccgggggatgtattaa 39134665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 452
Target Start/End: Original strand, 224619 - 224708
Alignment:
Q  363 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 452  Q
    ||||| ||||| || ||||||||||||||| ||||||| |||| |||| ||| || |||||||||||||||| ||| || ||||||||||    
T  224619 gaagacttatgagaccaaattgagacactttatagttaggggaccaaaatgaaaacataaaataagttaagggaccagatgatgtattaa 224708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 19525287 - 19525408
Alignment:
Q  333 aaacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    |||| |||| |||||||||  |||||||||||||| ||||| || ||||| ||||||||| ||||||| |||| |||| ||| ||   ||||||||||||    
T  19525287 aaacggagaggaccaaaatggtaaacggcagaagacttatgtgaccaaatggagacactttatagttaggggaccaaattgaaaaccaaaaataagttaa 19525386  T
Q  433 ggaaccggaggatgtattaagc 454  Q
    || |||  | ||||||||||||    
T  19525387 gggaccaaatgatgtattaagc 19525408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 410
Target Start/End: Complemental strand, 1663299 - 1663227
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||| |||||||||| |||||||||||||| |||| ||| |||||| |||||||| |||||||| ||||||||    
T  1663299 gagaagaccaaaatagtaaacggcagaagatttataggaccaaattaagacactttatagttaatggatcaaa 1663227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 5383133 - 5383093
Alignment:
Q  295 aataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  5383133 aataaaagatttaataaggtctatggtggaccacctataaa 5383093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 361 - 453
Target Start/End: Complemental strand, 8187254 - 8187164
Alignment:
Q  361 cagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 453  Q
    ||||||| ||||| ||  ||||||| ||| ||||||||||||| || |||||||||||||||||||| |||||| |||||| |||||||||||    
T  8187254 cagaagaattatgagactaaattgacacatttaatagttaagg-attaaactgagaaaataaaataaattaagggaccgga-gatgtattaag 8187164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 391 - 451
Target Start/End: Complemental strand, 11906414 - 11906354
Alignment:
Q  391 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtatta 451  Q
    ||||||||||||||| |||||||||||| ||| |||||||||||||||||  |||||||||    
T  11906414 ttaatagttaagggaccaaactgagaaattaacataagttaaggaaccgggagatgtatta 11906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 454
Target Start/End: Complemental strand, 12829625 - 12829566
Alignment:
Q  395 tagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||  |||||||||||||||    
T  12829625 tagttaagggaccaaactgaaaaaataaaataagttaagggacgagaggatgtattaagc 12829566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 400
Target Start/End: Complemental strand, 15856642 - 15856584
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    |||||||||||  ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  15856642 atgaccaaaatggtaaacggcagaagagttat-ggatcaaattgatacacttaatagtta 15856584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 454
Target Start/End: Complemental strand, 23679206 - 23679143
Alignment:
Q  391 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||||||||| |||||||| ||| |||||||| || ||| |||||||||||||||||||    
T  23679206 ttaatagttaagggaccaaactgaaaaattaaaataaatttagggaccggaggatgtattaagc 23679143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 454
Target Start/End: Original strand, 23855606 - 23855669
Alignment:
Q  391 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||||||||| |||||||| ||| |||||||| || ||| |||||||||||||||||||    
T  23855606 ttaatagttaagggaccaaactgaaaaattaaaataaatttagggaccggaggatgtattaagc 23855669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 15613617 - 15613555
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    |||| |||||||||| ||||||| |||||| |||||||| ||||||||||||||| |||||||    
T  15613617 gagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacactttatagtta 15613555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 400
Target Start/End: Original strand, 15614960 - 15615026
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    |||||||| |||||||||| |||||||||||| | |||||| | ||||||||||||||| |||||||    
T  15614960 aacagagaggaccaaaatagtaaacggcagaaaatttatggaaccaaattgagacactttatagtta 15615026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 24761676 - 24761630
Alignment:
Q  289 gttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  24761676 gttaaaaataaaagatttaatacggtttatggtggaccacctataaa 24761630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 40058215 - 40058169
Alignment:
Q  289 gttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||    
T  40058215 gttaaaaataaaagatttaataaggtctatggtggactacttataaa 40058169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 452
Target Start/End: Complemental strand, 22818215 - 22818158
Alignment:
Q  395 tagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 452  Q
    |||||||| |||||||||||  ||| |||||||||||||| |||||||||||||||||    
T  22818215 tagttaagagatcaaactgaacaaacaaaataagttaagggaccggaggatgtattaa 22818158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 434
Target Start/End: Complemental strand, 7426737 - 7426657
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||| ||||| ||| |||||| | || ||||| |||||||||| ||||||||| ||||| |||||||||||||| ||||||    
T  7426737 taaatggcagtagacttatggaaccatattgacacacttaataattaagggattaaactaagaaaataaaataaattaagg 7426657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 434
Target Start/End: Complemental strand, 12948008 - 12947928
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||| || |||| ||||| |||||||||||||||||| ||||||| ||||||||| ||| ||   ||||||||||||||    
T  12948008 taaacgacataagacttatgagatcaaattgagacactttatagttaggggatcaaaatgaaaatcaaaaataagttaagg 12947928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 454
Target Start/End: Original strand, 15510263 - 15510383
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||| |||||||| |   ||||||||||||  || |||| ||||||||||||||| ||||||| ||||||||| ||| |    |||||||||||||    
T  15510263 aacagagaggaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggggatcaaaatgaaatccgaaaataagttaag 15510362  T
Q  434 gaaccggaggatgtattaagc 454  Q
    | |||  || |||||||||||    
T  15510363 ggaccaaagcatgtattaagc 15510383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 405
Target Start/End: Original strand, 18695651 - 18695718
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaaggga 405  Q
    |||||||||| | || |||||||  ||||| |||||||| ||||||||||||||| ||||||||||||    
T  18695651 gagatgaccatattagtaaacggatgaagacttatgggaccaaattgagacactttatagttaaggga 18695718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 433
Target Start/End: Original strand, 19827148 - 19827239
Alignment:
Q  342 tgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    ||||||||||  ||||||| |||||| |||||||| ||||||||||||||| ||| ||| |||| |||| ||| ||   |||||||||||||    
T  19827148 tgaccaaaatggtaaacggaagaagatttatgggaccaaattgagacactttataattatgggaccaaattgaaaaccaaaaataagttaag 19827239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 381
Target Start/End: Original strand, 22819521 - 22819564
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaa 381  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||    
T  22819521 gagatgaccaaaatagtaaacggcagaagagttatgggaccaaa 22819564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 410
Target Start/End: Original strand, 26404219 - 26404286
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||||||||| |||| | || |||| |||||||||||||||||||||||| |||||||| ||| ||||    
T  26404219 gaccaaaatagtaaatgacataagatttatgggatcaaattgagacactttatagttaaaggaccaaa 26404286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 454
Target Start/End: Complemental strand, 30253673 - 30253582
Alignment:
Q  363 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||| ||||| || |||||||| ||||||||||||| ||||| || ||||| ||||||||| |||||| || | | || ||||||||||||    
T  30253673 gaagacttatgagaccaaattgacacacttaatagttgagggaccacactgaaaaaataaaacaagttaggggatcagatgatgtattaagc 30253582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 453
Target Start/End: Complemental strand, 1273196 - 1273086
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||  ||||| |||||||| |||||||| |||||||||||| || |||||||| ||| |||| ||| ||   ||||||| |||||| |||  |     
T  1273196 gaccaaaattgtaaactgcagaagatttatgggaccaaattgagacattttatagttaaaggaccaaaatgaaaaccaaaaataaattaagggaccaaat 1273097  T
Q  443 gatgtattaag 453  Q
    |||||||||||    
T  1273096 gatgtattaag 1273086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 15856739 - 15856685
Alignment:
Q  280 tatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataa 334  Q
    ||||||||| |||||| ||||| | ||| ||||||||||||||||||||||||||    
T  15856739 tatcaaatgattaaaattaaaaaacttagtaaggtctatggtggaccacctataa 15856685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 42979560 - 42979498
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    |||| |||||||||| |||||||||||||| |||| ||| |||||||| |||||| |||||||    
T  42979560 gagaggaccaaaatagtaaacggcagaagaattattggaccaaattgaaacactttatagtta 42979498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 432
Target Start/End: Complemental strand, 326451 - 326362
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    ||||||||| ||||||  ||||||| |||||  | ||||||||||||||| |||||| |||||||||| ||| ||   ||||||||||||    
T  326451 gaccaaaatgataaacaacagaagatttatgcaaccaaattgagacactttatagttgagggatcaaattgaaaaccaaaaataagttaa 326362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 12936109 - 12936202
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||||||  ||||| ||| |||| |||| ||| ||||||||||||||| ||||||| |||| |||| ||| ||   ||||||||||||||    
T  12936109 atgaccaaaatggtaaacagcataagacttattggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagg 12936202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 4567067 - 4566991
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    ||||||||||||||||| |   |||| |||||||  || |||| ||||||||||||||| ||||||| |||||||||    
T  4567067 aacagagatgaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttaggggatcaaa 4566991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 4567978 - 4568094
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||||||||||||||   || |||||||||  || |||| ||||||||||||||| ||||||| |||| |||| ||| |    |||||||||||||| ||    
T  4567978 gagatgaccaaaataggtaaaggcagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 4568077  T
Q  438 cggaggatgtattaagc 454  Q
    |  || |||||||||||    
T  4568078 caaagcatgtattaagc 4568094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 454
Target Start/End: Original strand, 7427993 - 7428044
Alignment:
Q  403 ggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||||||| ||||||||||||||||||| | |||  ||||||||||||    
T  7427993 ggatcaaactgaaaaaataaaataagttaagggatcgggagatgtattaagc 7428044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 328
Target Start/End: Complemental strand, 28702772 - 28702729
Alignment:
Q  285 aatggttaaaaataaaagatttaataaggtctatggtggaccac 328  Q
    ||||||||||| ||||||| |||||||| |||||||||||||||    
T  28702772 aatggttaaaattaaaagaattaataagatctatggtggaccac 28702729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 392
Target Start/End: Original strand, 38473562 - 38473613
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacactt 392  Q
    |||||||||||| |||||| ||||||| |||||||| |||||| ||||||||    
T  38473562 atgaccaaaatagtaaacgacagaagatttatgggaccaaattaagacactt 38473613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 7426846 - 7426792
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||| |||| ||| | ||| |||||||||||||||||||||||||||| ||||    
T  7426846 atcaaaaggttgaaatttaaaaatttaataaggtctatggtggaccacctttaaa 7426792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 452
Target Start/End: Original strand, 10085849 - 10085963
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| ||||  |||||||| |||||||| |||||||| |||||| | ||||||| || |||| ||| |    |||||||||||||| ||    
T  10085849 gagaggaccaaaatagtaaatagcagaagatttatgggaccaaattgaaacactttaaagttaagagaccaaagtgaaattcaaaaataagttaagggac 10085948  T
Q  438 cggaggatgtattaa 452  Q
    |  | ||||||||||    
T  10085949 caaatgatgtattaa 10085963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 19525207 - 19525253
Alignment:
Q  289 gttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||   ||||||||||||||||||||||||||| ||||||    
T  19525207 gttaaaaatatgtgatttaataaggtctatggtggaccacatataaa 19525253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 21387731 - 21387677
Alignment:
Q  356 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||||||||||| |||||||| |||||||||||| || ||||||| |||| ||||    
T  21387731 aacggcagaagatttatgggaccaaattgagacattttatagttaggggaccaaa 21387677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 21387842 - 21387788
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||| ||||| |||||||| || |||||||| ||||||| ||||    
T  21387842 atcaaatggttaaaattaaaaaatttaatacggcctatggtgaaccacctttaaa 21387788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 18693903 - 18693854
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacct 330  Q
    |||||||| |||||| ||||| |||||||| ||||||||||| |||||||    
T  18693903 atcaaatgattaaaattaaaaaatttaatacggtctatggtgaaccacct 18693854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 19524091 - 19523999
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||||||  |||||| ||||| | |||| | | ||||||||||||||| |||||||||||| |||| ||| ||   ||||||||||||||    
T  19524091 atgaccaaaatggtaaacgacagaaaatttatag-accaaattgagacactttatagttaagggaccaaattgaaaaccaaaaataagttaagg 19523999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 454
Target Start/End: Original strand, 21389163 - 21389261
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 453  Q
    |||||||  ||||| |||||||| ||||||||||||||  ||||||||||||  ||| ||| ||   |||||||||||||| |||  || ||||||||||    
T  21389163 taaacggaggaagacttatgggaccaaattgagacact--atagttaagggaaaaaaatgaaaaccaaaaataagttaagggaccaaagcatgtattaag 21389260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 453
Target Start/End: Original strand, 27894033 - 27894142
Alignment:
Q  344 accaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggagg 443  Q
    ||||||||| |||||| | ||| | ||||| || |||||||| |||||| ||||||| |||| |||| ||| || | |||||||||||||  |||  | |    
T  27894033 accaaaatagtaaacgacggaaaatttatgagaccaaattgaaacactttatagttaggggaccaaagtgaaaacaaaaaataagttaagcgaccaaacg 27894132  T
Q  444 atgtattaag 453  Q
    ||||||||||    
T  27894133 atgtattaag 27894142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 434
Target Start/End: Original strand, 8284288 - 8284344
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||| | ||| |||||||||||| ||  ||||||||||| |||||||||||||||    
T  8284288 caaattaaaacatttaatagttaagagactaaactgagaaattaaaataagttaagg 8284344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 410
Target Start/End: Complemental strand, 15509307 - 15509235
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||| ||||||||||   ||||||||||||  || |||| ||||||||||||||| ||||||| |||| ||||    
T  15509307 gagaggaccaaaataggtaacggcagaagacataagggaccaaattgagacactttatagttaggggaccaaa 15509235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 18693814 - 18693738
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||||||| |||||||| |   |||| ||||||| |||||||| || ||||||||| || |||||||||||| ||||    
T  18693814 aacagagaggaccaaaagaggtaacgacagaagatttatgggaccagattgagacattttatagttaagggaccaaa 18693738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 21006212 - 21006136
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||| |||| ||||||||||  ||| |||||| | |||||||||||||| ||| | | |||||||||||    
T  21006212 caaattgacacatttaaaagttaagggactaaagtgagaagaaaaaataagttaagggacctgcgtatgtattaagc 21006136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 21011852 - 21011928
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||| |||||||||||||||   || |||||| | |||||||||||||| ||| | | |||||||||||    
T  21011852 caaattgaaacatttaatagttaagggactgaagtgagaagaaaaaataagttaagggacctgcgtatgtattaagc 21011928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 24071487 - 24071562
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||| |||||| |||||| |  ||||||| ||| ||||||||||||||| | | |||||||||||||||    
T  24071487 caaattgaaacatttaataattaaggaactaaactgaaaaattaaaataagttaagggatc-gaggatgtattaagc 24071562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 26911266 - 26911234
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatg 373  Q
    |||||||||||||||||||| ||||||||||||    
T  26911266 atgaccaaaataataaacggtagaagagttatg 26911234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 2e-38; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 341 - 454
Target Start/End: Original strand, 43346454 - 43346567
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccgg 440  Q
    ||||||||||| ||||||| ||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  43346454 atgaccaaaatgataaacgacagaagagttatgagaccaaattgacacacttaatagttaagggatcaaactgagaaaataaaataagttaaggtatcgg 43346553  T
Q  441 aggatgtattaagc 454  Q
     |||||||||||||    
T  43346554 gggatgtattaagc 43346567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 341 - 453
Target Start/End: Original strand, 12062391 - 12062503
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccgg 440  Q
    |||||||||||| ||||| ||| |||||| |||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||    
T  12062391 atgaccaaaatagtaaacagcaaaagagtaatgggaccaaattgagacacttaatagttaagggaccaaactgaaaaaataaaataagttaagggaccgg 12062490  T
Q  441 aggatgtattaag 453  Q
    |||||||||||||    
T  12062491 aggatgtattaag 12062503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 23559931 - 23559815
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| |||||| ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||    
T  23559931 gagaggaccaaaatagtaaacgacagaagaattatgggatcaaattgagacacttaataattaagggaccaaactgagaaaataaaataagttaagggac 23559832  T
Q  438 cggaggatgtattaagc 454  Q
    ||| | |||||||||||    
T  23559831 cggggaatgtattaagc 23559815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 21128034 - 21127941
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||||||  ||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  21128034 atgaccaaaatggtaaacggcagaagagttatgggaccaaattgacacacttaatagttaagagatcaaactgaaaaaataaaataagttaagg 21127941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 145 - 335
Target Start/End: Original strand, 12062155 - 12062349
Alignment:
Q  145 aagatgatgaataaagatgagagttttatttggagatgatttagggaagatgatggaggaaaaaa--ttaagggtt-gttattcattataagttacaata 241  Q
    |||||||||||||||  |||||||||||||||| |||||||| ||||||| ||||||||||||||  ||| | ||| ||  ||||||||||  |||| ||    
T  12062155 aagatgatgaataaatttgagagttttatttggggatgattttgggaagaagatggaggaaaaaaaattaggtgtttgtggttcattataacctacagta 12062254  T
Q  242 gatttctccttgatccaacggtctttattt-nnnnnnnntatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||| ||||||||||||||||||||  ||||          |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  12062255 gatctctccttgatccaacggtctccatttgaagaaaaaaatcaaatggttaaaaatacaagatttaataaggtatatggtggatcacctataaa 12062349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 349 - 454
Target Start/End: Original strand, 23561140 - 23561245
Alignment:
Q  349 aataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgta 448  Q
    |||| |||||| ||||||| |||| ||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  23561140 aatagtaaacgtcagaagaattataggaccaaattaagacacttaataattaagggatcaaactgagaaaataaaataagttaagggatcgggggatgta 23561239  T
Q  449 ttaagc 454  Q
    ||||||    
T  23561240 ttaagc 23561245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 341 - 454
Target Start/End: Complemental strand, 35173256 - 35173143
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccgg 440  Q
    |||||||||||| |||||| || |||||||||| || |||||||| | |||||||||||||||||| ||| ||||||||||||||||||||||| || ||    
T  35173256 atgaccaaaatagtaaacgacaaaagagttatgagaccaaattgaaatacttaatagttaagggatgaaattgagaaaataaaataagttaagggactgg 35173157  T
Q  441 aggatgtattaagc 454  Q
     |||||||||||||    
T  35173156 gggatgtattaagc 35173143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 373 - 454
Target Start/End: Original strand, 7921682 - 7921763
Alignment:
Q  373 gggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  7921682 gggaccaatttgagacacttaatagttaagtgatcaaactgagaaaacaaaataagttaagggaccggaggatgtattaagc 7921763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 161 - 335
Target Start/End: Complemental strand, 23560147 - 23559970
Alignment:
Q  161 atgagagttttatttggagatgatttagggaagatgatggagga-aaaaattaag-ggttgttattcattataagttacaatagatttctccttgatcca 258  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| |||||||| | | ||||  ||||||||||| ||||||| || ||| |||||||||    
T  23560147 atgagagttttatttggagatgattttgggaagaagatggaggagaaaaattaggtgtttgtggttcattataagctacaatatatctcttcttgatcca 23560048  T
Q  259 acggtctttattt-nnnnnnnntatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||||  ||||          ||||||   ||||||||||||||||||||||| ||||||||||||||||||||||    
T  23560047 acggtctccatttaaaaaaaaagatcaaacaattaaaaataaaagatttaataagatctatggtggaccacctataaa 23559970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 12060770 - 12060656
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| ||||||||| || ||||||| |  ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||    
T  12060770 gagaggaccaaaatagtaaacggcaaaatagttatgaggccaaattgagacacttaatagttaagagactaaactgagaaaataaaataagttaagggac 12060671  T
Q  438 cggaggatgtattaag 453  Q
     || ||||||||||||    
T  12060670 tgg-ggatgtattaag 12060656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 371 - 454
Target Start/End: Original strand, 48867467 - 48867550
Alignment:
Q  371 atgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||| |||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  48867467 atgggaccaaattgacacacttaatagttaagggaccaaattgagaaaataaaataagttaagggaccggaggatgtataaagc 48867550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 334 - 434
Target Start/End: Original strand, 35174382 - 35174482
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||| |||||||||||| ||||||  ||||||||||||||| ||  |||| ||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  35174382 aacagaaatgaccaaaatagtaaacgatagaagagttatgggaccattttgaaacacttaatagttaagggaccaaaatgaaaaaataaaataagttaag 35174481  T
Q  434 g 434  Q
    |    
T  35174482 g 35174482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 374 - 454
Target Start/End: Complemental strand, 39530871 - 39530791
Alignment:
Q  374 ggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||||||| ||  |||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||    
T  39530871 ggatcaaattgaaacgtttaatagttaagggatcacactgagaaattaaaataagttaagggaccgggggatgtattaagc 39530791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 344 - 454
Target Start/End: Complemental strand, 43345425 - 43345315
Alignment:
Q  344 accaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggagg 443  Q
    ||||||||  ||||||  |||||| |||||||| |||||||| ||| || |||||||||||| | |||||||||||||||||||||||||| | | | ||    
T  43345425 accaaaatggtaaacgagagaagatttatgggaccaaattgaaacattttatagttaagggacctaactgagaaaataaaataagttaagggatctgggg 43345326  T
Q  444 atgtattaagc 454  Q
    |||||||||||    
T  43345325 atgtattaagc 43345315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 1031888 - 1031812
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||| ||||||||||||||| || ||||||||| ||||||||||||||| ||||| |||||||||||||    
T  1031888 caaattgaaacatttaatagttaagggaccacactgagaaattaaaataagttaagggaccgggggatgtattaagc 1031812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 334 - 434
Target Start/End: Complemental strand, 25583230 - 25583130
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||| |||||||||| |||||||||||||| |||||||| |||||||||||  |||||||||| |||| |||| ||| ||   |||||||||||||    
T  25583230 aacagagaggaccaaaatagtaaacggcagaagacttatgggaccaaattgagacgtttaatagttaggggaccaaagtgaaaatcaaaaataagttaag 25583131  T
Q  434 g 434  Q
    |    
T  25583130 g 25583130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 334 - 454
Target Start/End: Original strand, 42633886 - 42634006
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||| ||||||||||||||||| || |||| |||||||| ||||||||||||||  ||||||| |||| |||| ||| ||   |||||||||||||    
T  42633886 aacagagaggaccaaaataataaacgacataagatttatgggaccaaattgagacactctatagttaggggaccaaattgaaaatcaaaaataagttaag 42633985  T
Q  434 gaaccggaggatgtattaagc 454  Q
    | |||  | ||||||||||||    
T  42633986 ggaccaaatgatgtattaagc 42634006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 354 - 454
Target Start/End: Original strand, 51401371 - 51401471
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 453  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| ||| ||| ||||||||||    
T  51401371 taaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggaccagagcatgtattaag 51401470  T
Q  454 c 454  Q
    |    
T  51401471 c 51401471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 54653970 - 54654086
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| |||||| ||||||| |||||||| ||||||||||||||| |||||||||||| |||| ||| |    |||||||||||||| ||    
T  54653970 gagaggaccaaaatagtaaacgacagaagaattatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggac 54654069  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  54654070 caaatgatgtattaagc 54654086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 354 - 433
Target Start/End: Complemental strand, 48866237 - 48866158
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    ||||||| |||||| |||| ||| |||||||| ||||||||||||| |||||  ||||||||||||||||||||||||||    
T  48866237 taaacggaagaagacttataggaccaaattgacacacttaatagttcagggactaaactgagaaaataaaataagttaag 48866158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 432
Target Start/End: Original strand, 32980456 - 32980550
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    ||||||||||||||| |||||||||||||| |||| ||| |||||||||||||||  |||||| |||| |||| ||| || | ||||||||||||    
T  32980456 gagatgaccaaaatagtaaacggcagaagatttataggaccaaattgagacactttgtagttaggggaccaaattgaaaacagaaaataagttaa 32980550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 434
Target Start/End: Original strand, 10987653 - 10987753
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||| ||||||||||| |||||||| || | |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||    
T  10987653 aacagagaggaccaaaataaaaaacggcataaaatttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaag 10987752  T
Q  434 g 434  Q
    |    
T  10987753 g 10987753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 47855342 - 47855458
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| |||||||||||||| |||| ||| ||||||||||||||| |||||||| ||| |||| ||| |    |||||||||||||| ||    
T  47855342 gagaggaccaaaatagtaaacggcagaagatttataggaccaaattgagacactttatagttaacggaccaaaatgaaatccaaaaataagttaagggac 47855441  T
Q  438 cggaggatgtattaagc 454  Q
    |  || |||||||||||    
T  47855442 caaagcatgtattaagc 47855458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 50150793 - 50150717
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||| |||||||||||| || |||||||||||| ||||||||||||||| ||| | |||||||||||||    
T  50150793 caaattgaaacatttaatagttaagtgaccaaactgagaaattaaaataagttaagggacccggggatgtattaagc 50150717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 391 - 454
Target Start/End: Original strand, 46690351 - 46690414
Alignment:
Q  391 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||||||||||| || ||| |||| ||||||||||||||| |||||||||||||||||||    
T  46690351 ttaatagttaagggattaagctgggaaattaaaataagttaagggaccggaggatgtattaagc 46690414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 23560296 - 23560192
Alignment:
Q  12 agagagggagaatgagaatgtttg---tttttaggaatgattctgatagtaannnnnnnnaagaatgttaaggaaaatgaaaggaagatgatgattatag 108  Q
    ||||| |||||||||||||||||    |||||||||||||||||||| |||         |||||||||||||||||||||| ||||||||||||| |||    
T  23560296 agagaaggagaatgagaatgttttatttttttaggaatgattctgatcgtatttttttttaagaatgttaaggaaaatgaaacgaagatgatgattctag 23560197  T
Q  109 tagta 113  Q
    |||||    
T  23560196 tagta 23560192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 376 - 454
Target Start/End: Complemental strand, 32999871 - 32999793
Alignment:
Q  376 atcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| | ||| ||||||||||||||| |||||||||||| |||||||||||||||   ||| |||||||||||||    
T  32999871 atcaaattaaaacatttaatagttaagggaccaaactgagaaattaaaataagttaaggggtcgggggatgtattaagc 32999793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 51825628 - 51825697
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||||||||||| |||||| ||||||| |||||||| |||||||| |||||| |||||||||||| ||||    
T  51825628 atgaccaaaatagtaaacgacagaagatttatgggaccaaattgaaacactttatagttaagggaccaaa 51825697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 2088914 - 2088838
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||| |||||| |||||||| | |||||||||| |||||||| |||||| ||||| |||||||||||||    
T  2088914 caaattgaaacatttaataattaagggacctaactgagaaattaaaataaattaagggaccgggggatgtattaagc 2088838  T

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Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 8371332 - 8371236
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||| |||||||||| ||||| |||||||| |||||| | |||||||||||| || ||||||| |||| |||| ||| || | ||||||||||||||    
T  8371332 gagaggaccaaaatagtaaactgcagaagatttatggaaccaaattgagacattttatagttaggggaccaaaatgaaaacaaaaaataagttaagg 8371236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 410
Target Start/End: Complemental strand, 11219542 - 11219470
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    ||||||||||||||| |||||||||||||| | ||| || ||||||||||||||| ||||||| |||| ||||    
T  11219542 gagatgaccaaaatagtaaacggcagaagactcatgagaccaaattgagacactttatagttaggggaccaaa 11219470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 33000844 - 33000920
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||  |||||||||||||||||||||||||||| |||||||||||| || |||||   |||||||||||    
T  33000844 caaattgaaacgtttaatagttaagggatcaaactgagaaattaaaataagttaggggaccgggaaatgtattaagc 33000920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 42632818 - 42632702
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| ||| |||||| |||||| || |||| |||||||||||||||||||||||| ||||||| |||| |||| ||| ||   ||| |||||||||| ||    
T  42632818 gagaggactaaaatagtaaacgacataagatttatgggatcaaattgagacactttatagttaggggaccaaattgaaaaccaaaagtaagttaagggac 42632719  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  42632718 caaatgatgtattaagc 42632702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 45730709 - 45730633
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||  ||||||||||||||| |||||||||||| ||||||||||||||| ||| |  ||||||||||||    
T  45730709 caaattgaaacgtttaatagttaagggaccaaactgagaaattaaaataagttaagggaccaggagatgtattaagc 45730633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 454
Target Start/End: Original strand, 11220667 - 11220778
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||| |||||| ||||||| |||| ||| ||||||||||||||| ||||||| |||| |||| ||| |    |||||||||||||| |||  ||    
T  11220667 gaccaaaatagtaaacgacagaagatttataggaccaaattgagacactttatagttaggggaccaaaatgaaattcaaaaataagttaagggaccaaag 11220766  T
Q  443 gatgtattaagc 454  Q
     |||||||||||    
T  11220767 catgtattaagc 11220778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 43346361 - 43346411
Alignment:
Q  284 aaatggttaaaaataaaagatttaataaggtctatggtggaccacctataa 334  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  43346361 aaatggttaaaattaaaaaatttagtaaggtctatggtggaccacctataa 43346411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 49333187 - 49333134
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||| |||||    
T  49333187 atcaaacggttaaaaataaaagatt-aataaggtctatggtggaccacccataaa 49333134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 4067998 - 4067922
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||| | ||| |||||||||||||||| ||||||| ||| |||||||||||||||||  || | |||||||||||    
T  4067998 caaattaaaacatttaatagttaagggattaaactgataaattaaaataagttaaggaattggggcatgtattaagc 4067922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 410
Target Start/End: Complemental strand, 29536826 - 29536754
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||| |||||||||| ||||||  |||||| |||||||| ||||||||||||||| |||||||  ||||||||    
T  29536826 gagaggaccaaaatagtaaacgaaagaagatttatgggaccaaattgagacactttatagttagaggatcaaa 29536754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 438
Target Start/End: Complemental strand, 38639090 - 38639030
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaacc 438  Q
    ||||| || |||||| |||||||||||| |||||||| ||| |||||||||||||||||||    
T  38639090 caaatcgaaacactttatagttaagggaccaaactgaaaaactaaaataagttaaggaacc 38639030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 434
Target Start/End: Original strand, 39531860 - 39531916
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||| ||| || ||||||||||||| ||||||||||| |||||||||||||||    
T  39531860 caaattgaaacatttcatagttaagggattaaactgagaaattaaaataagttaagg 39531916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 41386242 - 41386126
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| |||||| |  |||| |||||| | ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| ||    
T  41386242 gagaggaccaaaatagtaaacgtcgtaagatttatggaaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggac 41386143  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  41386142 caaacgatgtattaagc 41386126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 53808430 - 53808314
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||||| |||||| || |||| |||||||| || |||||||||||| ||||||| | || |||| | | ||   |||||||||||||| ||    
T  53808430 gagatgaccaaaatagtaaacgacataagatttatgggaccagattgagacactttatagttaggagaccaaattcaaaaccgaaaataagttaagggac 53808331  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  53808330 caaatgatgtattaagc 53808314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 429
Target Start/End: Original strand, 49334337 - 49334432
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagt 429  Q
    ||||||||||| ||||||| ||||||| |||||| |||| ||| || ||||||||| || |||||||| ||| |||| ||| || | |||||||||    
T  49334337 aacagagatgatcaaaatagtaaacggtagaagatttatcggaccatattgagacaatttatagttaaaggaccaaaatgaaaacaaaaaataagt 49334432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 21128131 - 21128077
Alignment:
Q  280 tatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataa 334  Q
    |||||||||||||||| ||||| | ||  ||||||||||||||||||||||||||    
T  21128131 tatcaaatggttaaaattaaaaaactttgtaaggtctatggtggaccacctataa 21128077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 32979293 - 32979239
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||| ||||| |||||||| ||||||||||| ||||||| ||||    
T  32979293 atcaaatggttaaaattaaaaaatttaatacggtctatggtgaaccacctttaaa 32979239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 434
Target Start/End: Complemental strand, 43102011 - 43101910
Alignment:
Q  333 aaacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    |||| ||||||| ||||||| ||| || ||||||| |||||||| ||||||||||||||| ||| |||  ||| |||| ||| ||   ||||||||||||    
T  43102011 aaacggagatgatcaaaatagtaagcgacagaagaattatgggaccaaattgagacactttataattagaggaccaaaatgaaaaccaaaaataagttaa 43101912  T
Q  433 gg 434  Q
    ||    
T  43101911 gg 43101910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 47808110 - 47808175
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagg 403  Q
    |||| ||||||||||  ||||| ||||||| ||||| || ||||||||||||||| ||||||||||    
T  47808110 gagaggaccaaaatagcaaacgacagaagatttatgagaccaaattgagacactttatagttaagg 47808175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 432
Target Start/End: Original strand, 49122011 - 49122100
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    |||||||||  |||||||||||| | ||||| || ||||||||||||||| ||||||||| || |||| ||| ||   ||||||||||||    
T  49122011 gaccaaaatggtaaacggcagaaaacttatgagaccaaattgagacactttatagttaagagaccaaaatgaaaaccaaaaataagttaa 49122100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 431
Target Start/End: Original strand, 19253011 - 19253099
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagtta 431  Q
    |||||||||  |||||||||||| | ||||||||||||||||||||| || ||| ||| |||| |||| ||| ||   |||||||||||    
T  19253011 gaccaaaatggtaaacggcagaatatttatgggatcaaattgagacattttataattaggggaccaaattgaaaaccaaaaataagtta 19253099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 32974227 - 32974343
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||| |   ||||||||||||  || |||| ||||||||||||||| ||||||| |||| |||| ||| |    |||||||||||||| ||    
T  32974227 gagatgaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 32974326  T
Q  438 cggaggatgtattaagc 454  Q
    |  || |||||||||||    
T  32974327 caaagcatgtattaagc 32974343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 41387437 - 41387553
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| |||||||   |||  |||||||| |||||||||||| || ||||||| |||| |||| ||| ||   |||||||||||||| ||    
T  41387437 gagaggaccaaaatagtaaacggtgtaaggtttatgggaccaaattgagacattttatagttaggggaccaaattgaaaaccaaaaataagttaagggac 41387536  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  41387537 caaatgatgtattaagc 41387553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 47806914 - 47806858
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    ||||| |||||||| |||| ||||||||||||||||||| ||| |||||||| ||||    
T  47806914 taaacagcagaagatttataggatcaaattgagacactttataattaagggaccaaa 47806858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 53901641 - 53901565
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||| | ||| |||||||||||||||  ||||||||||| |||||||| |||||| | ||| | |||||||||||    
T  53901641 caaattaaaacatttaatagttaagggactaaactgagaaattaaaataaattaagggatcggggtatgtattaagc 53901565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 454
Target Start/End: Complemental strand, 23886783 - 23886696
Alignment:
Q  367 agttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||||| |||||||||||| || | ||||||||||| ||| ||| |  | |||||||||||||| |||  || |||||||||||    
T  23886783 agttatgggaccaaattgagacattttaaagttaagggataaaaatgaaattaaaaaataagttaagggaccaaagcatgtattaagc 23886696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 454
Target Start/End: Complemental strand, 54752723 - 54752612
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||| ||||||||| ||||  ||  ||| ||||||||||||||| ||||||| ||||  ||| ||| ||   |||||||||||||| |||  |     
T  54752723 gaccaaaatagtaaacggcataagatatacaggaccaaattgagacactttatagttaggggactaaattgaaaatgaaaaataagttaagggaccaaat 54752624  T
Q  443 gatgtattaagc 454  Q
    ||||||||||||    
T  54752623 gatgtattaagc 54752612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 2124141 - 2124079
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    ||||||||||||||| ||||||||| |||| |||||||| |||||| ||| | || |||||||    
T  2124141 gagatgaccaaaatagtaaacggcataagatttatgggaccaaattaagatattttatagtta 2124079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 11219635 - 11219581
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||| ||||| |||||||| | ||||||||| ||||||| ||||    
T  11219635 atcaaatggttaaaattaaaaaatttaatacgatctatggtgaaccacctttaaa 11219581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 17350013 - 17350067
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||| ||||| ||||| |||||  ||||||||||||||| ||||    
T  17350013 atcaaatggttaaaattaaaaaatttagtaaggcatatggtggaccacctttaaa 17350067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 454
Target Start/End: Original strand, 19579316 - 19579414
Alignment:
Q  356 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||| |||||||  || |||| ||||||||||||||| |||||||||||| |||| ||| |    |||||||||||||| |||  || |||||||||||    
T  19579316 aacgacagaagacataagggaccaaattgagacactttatagttaagggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagc 19579414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 400
Target Start/End: Original strand, 25585837 - 25585899
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    |||||||| |||||| |||||| ||||||| ||||| || |||||||||||  ||||||||||    
T  25585837 gagatgactaaaatagtaaacgacagaagatttatgagaccaaattgagacgtttaatagtta 25585899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 454
Target Start/End: Complemental strand, 32973233 - 32973135
Alignment:
Q  356 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||||||  || |||| ||||||||||||||| ||||||| |||| |||| ||| |    |||||||||||||| |||  || |||||||||||    
T  32973233 aacggcagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagc 32973135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 39133222 - 39133168
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||| ||||| ||||| |||||  ||||||||||||||| ||||    
T  39133222 atcaaatggttaaaattaaaaaatttagtaaggcatatggtggaccacctttaaa 39133168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 48254799 - 48254853
Alignment:
Q  280 tatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataa 334  Q
    |||||| ||||||||| ||||| | ||| |||||| |||||||||||||||||||    
T  48254799 tatcaagtggttaaaattaaaaaacttagtaaggtttatggtggaccacctataa 48254853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 8371425 - 8371376
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacct 330  Q
    |||||| |||||||| ||||| ||||| ||||||| ||||||||||||||    
T  8371425 atcaaagggttaaaattaaaaaatttactaaggtccatggtggaccacct 8371376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 434
Target Start/End: Original strand, 8372651 - 8372716
Alignment:
Q  369 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   ||||||||||||||    
T  8372651 ttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagg 8372716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 454
Target Start/End: Original strand, 17350141 - 17350222
Alignment:
Q  373 gggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  | ||||||||||||    
T  17350141 gggaccaaattgagacactttatagttaggggaacaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagc 17350222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 53808523 - 53808474
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacct 330  Q
    |||||| |||||||| | ||| |||||||||||| |||||||||||||||    
T  53808523 atcaaagggttaaaatttaaaaatttaataaggtttatggtggaccacct 53808474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 410
Target Start/End: Original strand, 26798910 - 26798982
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||| |||||||||  |||||||  ||||| |||||||| |||||||||||| || ||||||| |||| ||||    
T  26798910 gagaggaccaaaatggtaaacggaggaagaattatgggaccaaattgagacattttatagttaggggaccaaa 26798982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 400
Target Start/End: Complemental strand, 32979178 - 32979138
Alignment:
Q  360 gcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    |||||| | |||||||||||||||||||||||| |||||||    
T  32979178 gcagaaaatttatgggatcaaattgagacactttatagtta 32979138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 47765550 - 47765435
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||| |||||||  | |||||  || |||||||| ||||||||||| |||||| ||||| |||| ||| ||   |||||||||||||  |     
T  47765550 gagatgaccaaaacaataaacaacggaagatataagggatcaatttgagacactttatagtt-agggaccaaagtgaaaacggaaaataagttaagagag 47765452  T
Q  438 cggaggatgtattaagc 454  Q
    | || ||||||||||||    
T  47765451 cagatgatgtattaagc 47765435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 438
Target Start/End: Original strand, 47766971 - 47767054
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaacc 438  Q
    |||||||  ||||| |||||||| ||||||||||||||| |||||| ||||| |||| ||| ||   |||||||||||| |||||    
T  47766971 taaacggaggaagacttatgggaccaaattgagacactttatagtt-agggaccaaaatgaaaaccaaaaataagttaatgaacc 47767054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 48253029 - 48252973
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||||||  ||||| |||||||| ||||||||||||||| ||||||| |||| ||||    
T  48253029 taaacggaggaagacttatgggaccaaattgagacactttatagttaggggaccaaa 48252973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 434
Target Start/End: Original strand, 50765818 - 50765874
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||| ||  |||||||||||  ||||||||||||||| |||||||| ||||||    
T  50765818 caaattgaaacgtttaatagttaaaagatcaaactgagaaattaaaataaattaagg 50765874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 53342788 - 53342712
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||||||||| ||||||| |||| |||| ||| |    ||||||||||||||||||  || |||||||||||    
T  53342788 caaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaaggaaccaaagcatgtattaagc 53342712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 2e-38; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 147 - 335
Target Start/End: Complemental strand, 14509549 - 14509360
Alignment:
Q  147 gatgatgaataaagatgagagttttatttggagatgatttagggaagatgatggaggaaaaaattaag-ggttgttattcattataagttacaatagatt 245  Q
    ||||||||| ||||||||||||||||||| | |||||||||||||||| ||||||||||||||||| | | ||||  ||||||| ||| |||| |||||     
T  14509549 gatgatgaaaaaagatgagagttttattttgggatgatttagggaagaagatggaggaaaaaattaggtgtttgtggttcattacaagctacagtagatc 14509450  T
Q  246 tctccttgatccaacggtctttatttnnnnnnnntatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||| ||||||||||| ||||  | ||        ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14509449 tctacttgatccaacagtctccaattaaaaaaaatatcaaacggttaaaaataaaaggtttaataaggtctatggtggaccacctataaa 14509360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 339 - 454
Target Start/End: Original strand, 14510514 - 14510629
Alignment:
Q  339 agatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaacc 438  Q
    ||||||| |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||| | |||    
T  14510514 agatgactaaaatagtaaacggcagaagagttataggaccaaattgagacacttaatagttaagggactaaactaagaaaataaaataagttaaaggacc 14510613  T
Q  439 ggaggatgtattaagc 454  Q
    || | |||||||||||    
T  14510614 ggggtatgtattaagc 14510629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 14509321 - 14509205
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| |||||| ||||||| |||||||| | |||| | |||||| |||||||||||| |||| ||||||||||||||||||||||| |     
T  14509321 gagaggaccaaaatagtaaacgacagaagatttatgggaccgaattaaaacactttatagttaagggaccaaagtgagaaaataaaataagttaagggat 14509222  T
Q  438 cggaggatgtattaagc 454  Q
    |||||||||||||||||    
T  14509221 cggaggatgtattaagc 14509205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 363 - 454
Target Start/End: Original strand, 25570899 - 25570990
Alignment:
Q  363 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||| |||||| |||||||||| |||||||||||||||||||  | ||||||||||||||||||||||||| |||| ||||||||||||||    
T  25570899 gaagacttatggaatcaaattgaaacacttaatagttaagggactacactgagaaaataaaataagttaagggaccgaaggatgtattaagc 25570990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 354 - 454
Target Start/End: Original strand, 7983715 - 7983814
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 453  Q
    ||||||| |||||| |||| ||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||| | ||| ||||||||||||    
T  7983715 taaacggtagaagacttataggaccaaattgacacacttaatagttaaggaattaaactgagaaaataaaataagttaagggatcgg-ggatgtattaag 7983813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 343 - 454
Target Start/End: Original strand, 15850668 - 15850779
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    ||||||||||   ||| |||||||||||||| || |||||||| ||| || |||||||| ||| |||||| ||||||||||||||||||||| ||||| |    
T  15850668 gaccaaaataggtaacagcagaagagttatgagaccaaattgaaacattttatagttaaaggagcaaactaagaaaataaaataagttaagggaccgggg 15850767  T
Q  443 gatgtattaagc 454  Q
    ||||||||||||    
T  15850768 gatgtattaagc 15850779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 454
Target Start/End: Original strand, 3533640 - 3533746
Alignment:
Q  348 aaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgt 447  Q
    ||||| |||||| || |||| ||||| || |||||||| ||||||||||||||||||| |||||| | ||||||||||||||||| | ||||||| ||||    
T  3533640 aaatagtaaacgacaaaagatttatgagaccaaattgacacacttaatagttaagggaccaaactaaaaaaataaaataagttaaaggaccggagaatgt 3533739  T
Q  448 attaagc 454  Q
    |||||||    
T  3533740 attaagc 3533746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 334 - 434
Target Start/End: Complemental strand, 3532310 - 3532210
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||||||| |||||| |||| | || |||| ||||| || |||||||| |||||||||| ||||||||||||||||| |||||||||||| |||||    
T  3532310 aacagagatgactaaaatagtaaatgacaaaagacttatgtgaccaaattgacacacttaataattaagggatcaaactgaaaaaataaaataaattaag 3532211  T
Q  434 g 434  Q
    |    
T  3532210 g 3532210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 373 - 454
Target Start/End: Complemental strand, 15850189 - 15850108
Alignment:
Q  373 gggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||| ||||||||||||||| ||||||||| || |||||||| ||||||||||||||||||| ||||| ||||| |||||||    
T  15850189 gggaccaaattgagacactttatagttaagagaccaaactgaaaaaataaaataagttaagggaccgggggatgcattaagc 15850108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 7982384 - 7982308
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| | | |||  ||||||||||||    
T  7982384 caaattgacacactttatagttaagggatcaaactgagaaaataaaataagttaaaggatcgggagatgtattaagc 7982308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 341 - 452
Target Start/End: Original strand, 10368392 - 10368503
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccgg 440  Q
    ||||||||||| |||||||| |||| | |||||||||||||||||||||||| ||||||| ||||||||| ||| ||   ||||||| |||||| |||      
T  10368392 atgaccaaaatgataaacggaagaaaatttatgggatcaaattgagacactttatagttaggggatcaaattgaaaatcaaaaataaattaagggaccaa 10368491  T
Q  441 aggatgtattaa 452  Q
    | ||||||||||    
T  10368492 atgatgtattaa 10368503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 14509679 - 14509586
Alignment:
Q  12 agagagggagaatgagaatgtttg--tttttaggaatgattctgatagtaannnnnnnnaagaatgttaaggaaaatgaaaggaagatgatgat 103  Q
    ||||| |||||||||||||||||   |||||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||    
T  14509679 agagaaggagaatgagaatgttttattttttaggaatgattctgatagtaattttttttaagaatgttaaggaaaatgaaatgaagatgatgat 14509586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 344 - 454
Target Start/End: Complemental strand, 25569875 - 25569765
Alignment:
Q  344 accaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggagg 443  Q
    ||||||| |||||||||  ||||| ||||| || |||||||| |||  |||||||||||||| |||||| | ||||||||||||||||| | ||| | ||    
T  25569875 accaaaacaataaacggaggaagacttatgtgaccaaattgacacaagtaatagttaagggaccaaactaaaaaaataaaataagttaaaggacctgggg 25569776  T
Q  444 atgtattaagc 454  Q
    |||||||||||    
T  25569775 atgtattaagc 25569765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 37867873 - 37867752
Alignment:
Q  333 aaacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    ||||||| ||||||||||| |||||||  |||| | || ||||| ||||||||||||||| ||||||| ||||||||| ||| ||   ||||||||||||    
T  37867873 aaacagacatgaccaaaatgataaacgaaagaaaatttgtgggaccaaattgagacactttatagttaggggatcaaattgaaaaccaaaaataagttaa 37867774  T
Q  433 ggaaccggaggatgtattaagc 454  Q
    || |||  | ||||||||||||    
T  37867773 gggaccaaatgatgtattaagc 37867752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 454
Target Start/End: Complemental strand, 4829581 - 4829461
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||| |||||||||| |||||| || |||| ||||| ||||||||||||||| || ||||||||||||  ||| ||| ||   |||||||||||||    
T  4829581 aacagagaggaccaaaatagtaaacgacataagatttatgagatcaaattgagacattttatagttaagggactaaagtgaaaacgaaaaataagttaag 4829482  T
Q  434 gaaccggaggatgtattaagc 454  Q
    ||| |  | ||||||||||||    
T  4829481 gaatcaaatgatgtattaagc 4829461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 435
Target Start/End: Original strand, 7490204 - 7490296
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagga 435  Q
    |||||||||| |||||   | |||| |||||||| |||||||||||| || ||| |||| ||| |||||||||||||||||||||||||||||    
T  7490204 gaccaaaatagtaaacaataaaagatttatgggaccaaattgagacattttataattaaaggaccaaactgagaaaataaaataagttaagga 7490296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 343 - 454
Target Start/End: Complemental strand, 42246698 - 42246587
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||| ||||||| | |||||||||||||||||||||| |||||| ||| ||| ||||||||| ||| ||   |||| ||||||||| |||  ||    
T  42246698 gaccaaaatagtaaacggtaaaagagttatgggatcaaattgaaacactttataattaggggatcaaaatgaaaaccaaaaacaagttaagggaccaaag 42246599  T
Q  443 gatgtattaagc 454  Q
     |||||||||||    
T  42246598 catgtattaagc 42246587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 405
Target Start/End: Complemental strand, 7037085 - 7037011
Alignment:
Q  331 ataaacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaaggga 405  Q
    |||||| || |||||||||||  |||||||||||||| |||||||| |||||||| |||||| ||||||||||||    
T  7037085 ataaacggaaatgaccaaaatggtaaacggcagaagacttatgggaccaaattgaaacactttatagttaaggga 7037011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 25570790 - 25570835
Alignment:
Q  290 ttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  25570790 ttaaaaataaaatatttaataaggtctatggtggaccacctataaa 25570835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 10367541 - 10367461
Alignment:
Q  186 tagggaagatgatggaggaaaaaattaagggtt-gttattcattataagttacaatagatttctccttgatccaacggtct 265  Q
    ||||||||| ||||||||||||||||| | ||| || |||||||||||| ||||||||||| || | ||||||||||||||    
T  10367541 tagggaagaagatggaggaaaaaattaggtgtttgtgattcattataagctacaatagattccttcatgatccaacggtct 10367461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 410
Target Start/End: Complemental strand, 12852998 - 12852926
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    ||||||||||||||| ||||||  |||||| |||||||| ||||||||||||||| ||||||| |||| ||||    
T  12852998 gagatgaccaaaatagtaaacgatagaagatttatgggaccaaattgagacactttatagttaggggaccaaa 12852926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 454
Target Start/End: Complemental strand, 6707033 - 6706922
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||| ||||||| |||||| |||||| | ||||||||||||||| ||||||| |||| |||| ||| |    |||||||||||||| |||  ||    
T  6707033 gaccaaaatagtaaacggaagaagatttatggaaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaaataagttaagggaccaaag 6706934  T
Q  443 gatgtattaagc 454  Q
     |||||||||||    
T  6706933 catgtattaagc 6706922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 454
Target Start/End: Original strand, 8538686 - 8538745
Alignment:
Q  395 tagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| || |||||||||||||||||||||||||||| |||||  ||||||||||||    
T  8538686 tagttaagagaccaaactgagaaaataaaataagttaagggaccggttgatgtattaagc 8538745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 454
Target Start/End: Original strand, 12854130 - 12854224
Alignment:
Q  360 gcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||| |||| ||| |    |||||||||||||| |||  || |||||||||||    
T  12854130 gcagaagatttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatctaaaaataagttaagggaccaaagcatgtattaagc 12854224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 23177786 - 23177724
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    |||| |||||||||  |||||||||||||| |||||||| ||||||||||||||| |||||||    
T  23177786 gagaggaccaaaatggtaaacggcagaagatttatgggaccaaattgagacactttatagtta 23177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 23589043 - 23588981
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    |||| |||||||||  |||||||||||||| |||||||| ||||||||||||||| |||||||    
T  23589043 gagaggaccaaaatggtaaacggcagaagatttatgggaccaaattgagacactttatagtta 23588981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 378 - 452
Target Start/End: Original strand, 33553409 - 33553483
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 452  Q
    |||||||| ||  |||||||||||| || |||||||| ||| ||||||||||||||| | |||||||||||||||    
T  33553409 caaattgaaacgtttaatagttaagagaccaaactgaaaaattaaaataagttaagggatcggaggatgtattaa 33553483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 431
Target Start/End: Complemental strand, 2581915 - 2581822
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagtta 431  Q
    |||| |||||| ||| ||||||||  |||| |||||||| ||||||||||||||| ||||||| ||||||||| ||| ||   |||||||||||    
T  2581915 gagaggaccaagatagtaaacggcgtaagatttatgggaccaaattgagacactttatagttaggggatcaaattgaaaaccaaaaataagtta 2581822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 12958525 - 12958456
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    ||||||||||| ||||| || |||| | |||||||| ||||||||||||||| ||||||| |||||||||    
T  12958525 atgaccaaaatgataaatggaagaaaatttatgggaccaaattgagacactttatagttaggggatcaaa 12958456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 434
Target Start/End: Original strand, 35801065 - 35801145
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||| ||||||||||||| |||| |||||||| |||||| ||||||||||||| ||| ||| || | |||| |||||||||    
T  35801065 taaatggcagaagagttaggggaccaaattgaaacactttatagttaagggatgaaaatgaaaatagaaaacaagttaagg 35801145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 7037171 - 7037117
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||| |||||||||| |||||||||||||||| || |||||| ||||||||||    
T  7037171 atcaaacggttaaaaatgaaagatttaataaggtttacggtggatcacctataaa 7037117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 454
Target Start/End: Original strand, 7038366 - 7038452
Alignment:
Q  368 gttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||| ||||||||||||||| |||||||||||| |||| ||| |    |||||||||||||| |||  | ||||||||||||    
T  7038366 gttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaagc 7038452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 410
Target Start/End: Complemental strand, 11386730 - 11386664
Alignment:
Q  344 accaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    ||||||||  ||||||| |||||  ||||||||||||||||| |||||| |||||||||||| ||||    
T  11386730 accaaaatggtaaacggtagaaggtttatgggatcaaattgaaacactttatagttaagggaccaaa 11386664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 11575397 - 11575451
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||| ||||| |||| |||||||||||||||| ||||||||| ||||||||||    
T  11575397 atcaaacggttagaaatgaaagatttaataaggtttatggtggatcacctataaa 11575451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 12959616 - 12959670
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||| |||||||||||   ||||||||||||||||| ||||||||||||||||    
T  12959616 atcaaaaggttaaaaatatgtgatttaataaggtctattgtggaccacctataaa 12959670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 440
Target Start/End: Original strand, 20630715 - 20630777
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccgg 440  Q
    |||||||| ||  |||||||||||||||| ||||||||||| ||||||||||| ||| |||||    
T  20630715 caaattgaaacgtttaatagttaagggattaaactgagaaattaaaataagtttagggaccgg 20630777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 21012084 - 21012174
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataag 428  Q
    ||||||||||||||| |||||| | ||||| ||  |||| |||||||| |||||| ||||||| ||||||||| ||| || | ||||||||    
T  21012084 gagatgaccaaaatagtaaacgacggaagatttgagggaccaaattgaaacactttatagttaggggatcaaaatgaaaacaaaaaataag 21012174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 434
Target Start/End: Original strand, 37869039 - 37869140
Alignment:
Q  333 aaacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    |||| |||| ||||||||   |||||| ||||||| ||||| ||  |||||||||||||| |||||||||||| |||| ||| ||   ||||||||||||    
T  37869039 aaacggagaagaccaaaaaggtaaacgacagaagacttatgagactaaattgagacactttatagttaagggaccaaattgaaaatcaaaaataagttaa 37869138  T
Q  433 gg 434  Q
    ||    
T  37869139 gg 37869140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 1624980 - 1625079
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| |||| |||| |||| |||| ||| ||||||||||||||| ||||||| | ||||||| ||| |    |||||||||||||||||    
T  1624980 gagaagaccaaaatagtaaatggcataagatttataggaccaaattgagacactttatagtta-gagatcaaaatgaaatccaaaaataagttaaggaac 1625078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 8537124 - 8537028
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||||||||||   |||| ||||| |  || |||| ||| |||||||| ||  ||||||| | |||||||| |||||||||||||||||||||    
T  8537124 gagatgaccaaaatagataacgacagaatacataagggaccaatttgagacattttttagttaaagaatcaaactaagaaaataaaataagttaagg 8537028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 438
Target Start/End: Complemental strand, 10367335 - 10367251
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaacc 438  Q
    |||||||||||||| ||||| ||  |||||||||||||| |||||||||  | |||| ||| ||   ||||||||||||||||||    
T  10367335 taaacggcagaagacttatgagactaaattgagacactttatagttaagaaaccaaattgaaaatcaaaaataagttaaggaacc 10367251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 438
Target Start/End: Original strand, 12959725 - 12959809
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaacc 438  Q
    |||||||||||||| |||| |||  |||||||||||||| || ||||||||| |||| | | ||   ||||||||||||||||||    
T  12959725 taaacggcagaagatttatcggactaaattgagacactttattgttaagggaccaaattaaaaatcaaaaataagttaaggaacc 12959809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 23178886 - 23178982
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||||||||||||||||| | ||||| |||||||| ||| || | ||| || ||||||| |||| |||| ||| ||   ||||||||||||||    
T  23178886 gagatgaccaaaataataaacgactgaagatttatgggaccaatttaaaacagtttatagttaggggaccaaagtgaaaactaaaaataagttaagg 23178982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 23590143 - 23590239
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||||||||||||||||| | ||||| |||||||| ||| || | ||| || ||||||| |||| |||| ||| ||   ||||||||||||||    
T  23590143 gagatgaccaaaataataaacgactgaagatttatgggaccaatttaaaacagtttatagttaggggaccaaagtgaaaactaaaaataagttaagg 23590239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 337
Target Start/End: Original strand, 29424523 - 29424579
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaaca 337  Q
    |||||| |||||||| | ||| ||||||||||||||||| |||||||||| ||||||    
T  29424523 atcaaaaggttaaaatttaaaaatttaataaggtctatgatggaccacctttaaaca 29424579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 405
Target Start/End: Original strand, 29424612 - 29424683
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaaggga 405  Q
    |||||||| |||||||| |||||||||||||| | | | |||| |||||||| |||||| ||||||| ||||    
T  29424612 aacagagaggaccaaaacaataaacggcagaatattcaagggaccaaattgaaacactttatagttagggga 29424683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 434
Target Start/End: Original strand, 41795989 - 41796052
Alignment:
Q  371 atgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||| ||||||||||||||| ||||||| ||||||||| ||| ||   ||||||||||||||    
T  41795989 atgggaccaaattgagacactttatagttaggggatcaaaatgaaaatcaaaaataagttaagg 41796052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 454
Target Start/End: Complemental strand, 42772521 - 42772434
Alignment:
Q  367 agttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||||| |||||||||||  || | ||||||||||||||| ||| |    ||||||||||||||||||  || |||||||||||    
T  42772521 agttatgggaccaaattgagacggtttaaagttaagggatcaaaatgaaattcaaaaataagttaaggaaccaaagcatgtattaagc 42772434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 2305634 - 2305580
Alignment:
Q  356 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    ||||||||||||  || |||| ||||||||||||||| ||||||| |||||||||    
T  2305634 aacggcagaagacataagggaccaaattgagacactttatagttaggggatcaaa 2305580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 3528176 - 3528230
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||| ||||||||| ||||| |||||||| ||||||||||| ||||||| ||||    
T  3528176 atcaactggttaaaattaaaaaatttaatacggtctatggtgaaccacctttaaa 3528230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 10367444 - 10367390
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||| |||||||| ||   ||||||||||||||||| ||||||||||||||||    
T  10367444 atcaaacggttaaaagtatgtgatttaataaggtctattgtggaccacctataaa 10367390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 12853091 - 12853037
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||| | ||| |||||||| ||||||||||| ||||||| ||||    
T  12853091 atcaaatggttaaaattcaaaaatttaatacggtctatggtgaaccacctttaaa 12853037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 327
Target Start/End: Complemental strand, 23232376 - 23232330
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggacca 327  Q
    |||||| |||||||| ||||||| |||||||||| ||||||||||||    
T  23232376 atcaaacggttaaaattaaaagaattaataaggtttatggtggacca 23232330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 440
Target Start/End: Complemental strand, 30178601 - 30178555
Alignment:
Q  394 atagttaagggatcaaactgagaaaataaaataagttaaggaaccgg 440  Q
    |||||||||||| ||| |||||||| ||||||||||||||| |||||    
T  30178601 atagttaagggaccaatctgagaaattaaaataagttaagggaccgg 30178555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 37868951 - 37869005
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||| |||||||| ||   ||||||||||||||||| ||||||||||||||||    
T  37868951 atcaaacggttaaaagtatgtgatttaataaggtctattgtggaccacctataaa 37869005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 321
Target Start/End: Original strand, 42249629 - 42249735
Alignment:
Q  215 ggttgttattcattataagttacaatagatttctccttgatccaacggtctttatttnnnnnnnntatcaaatggttaaaaataaaagatttaataaggt 314  Q
    ||||||| ||||||||||| ||||||||||| |||| |||||||||  |||| ||||         |||||| |||||||| ||||| |||||||||  |    
T  42249629 ggttgttgttcattataagctacaatagattcctccgtgatccaacaatcttcatttttaaaaaagatcaaacggttaaaattaaaaaatttaataaaat 42249728  T
Q  315 ctatggt 321  Q
    |||||||    
T  42249729 ctatggt 42249735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 434
Target Start/End: Complemental strand, 32614502 - 32614401
Alignment:
Q  333 aaacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    |||| |||| ||| |||||  |||||| || ||||||||||| |  ||||||| |||| | ||||||| |||| |||| ||| ||||||||||||| |||    
T  32614502 aaacggagaggactaaaatggtaaacgacataagagttatggaactaaattgaaacacgtgatagttaggggaccaaaatgaaaaaataaaataagctaa 32614403  T
Q  433 gg 434  Q
    ||    
T  32614402 gg 32614401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 391
Target Start/End: Original strand, 40174768 - 40174821
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacact 391  Q
    ||||||||||||||| |||||  ||||||| |||||||| |||||||| |||||    
T  40174768 gagatgaccaaaatagtaaacaacagaagatttatgggaccaaattgaaacact 40174821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 265
Target Start/End: Original strand, 12959519 - 12959599
Alignment:
Q  186 tagggaagatgatggaggaaaaaattaagggtt-gttattcattataagttacaatagatttctccttgatccaacggtct 265  Q
    ||||||||| ||| ||||||||||||| | ||| || |||||||||||| ||||||||||  || | ||||||||| ||||    
T  12959519 tagggaagaagatagaggaaaaaattaggtgtttgtgattcattataaggtacaatagatcccttcatgatccaacagtct 12959599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 410
Target Start/End: Complemental strand, 15650553 - 15650481
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    ||||||||||||||| |||||| || |||| ||| |  | ||||||||||||||| ||||||| |||| ||||    
T  15650553 gagatgaccaaaatagtaaacgacataagatttaagataccaaattgagacactttatagttaggggaccaaa 15650481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 434
Target Start/End: Complemental strand, 35799608 - 35799528
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    ||||||| |||| ||||||| || ||||||||||||||| ||||||| ||||  ||| ||| ||   ||||||||||||||    
T  35799608 taaacggaagaaaagttatgagaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaagg 35799528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 81; Significance: 6e-38; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 334 - 454
Target Start/End: Original strand, 42346 - 42465
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||| |||||||||| |||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  42346 aacagagaggaccaaaatagtaaacgacagaagatttatgggatcaaattgatacacgtaatagttaagggatcaaactgagaaaataaaataagttaag 42445  T
Q  434 gaaccggaggatgtattaagc 454  Q
    | ||| || ||||||||||||    
T  42446 ggacc-gaagatgtattaagc 42465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 389 - 452
Target Start/End: Complemental strand, 40977 - 40914
Alignment:
Q  389 acttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 452  Q
    |||||||||||||||||||||||||| ||||||||| | ||||||| ||| | |||||||||||    
T  40977 acttaatagttaagggatcaaactgaaaaaataaaaaaggttaagggaccaggggatgtattaa 40914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 6e-38; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 334 - 454
Target Start/End: Complemental strand, 6139113 - 6138993
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||||||||||||||||||||  || |||||||||| || |||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  6139113 aacagagatgaccaaaataataaacaacataagagttatgagaccaaattgagacatttaataattaagggaccaaactgagaaaataaaataagttaag 6139014  T
Q  434 gaaccggaggatgtattaagc 454  Q
    | | |||||||||||||||||    
T  6139013 ggatcggaggatgtattaagc 6138993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 334 - 454
Target Start/End: Original strand, 50531756 - 50531876
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||| ||||| |||||| |||||| || ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  50531756 aacagaaatgactaaaatagtaaacgacaaaagagttatgggaccaaattgagacacttaatagttaagggatcaaattgagaaaataaaataagttaag 50531855  T
Q  434 gaaccggaggatgtattaagc 454  Q
    | || |  |||||||||||||    
T  50531856 ggacagtgggatgtattaagc 50531876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 44159197 - 44159081
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| | ||    
T  44159197 gagatgaccaaaataataaacggcagaagagttgtggaaccaaattgaaacacttaatagttaagagatcaaactgaaaaaataaaataagttaaaggac 44159098  T
Q  438 cggaggatgtattaagc 454  Q
    |||  ||| ||||||||    
T  44159097 cgggagatatattaagc 44159081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 337 - 454
Target Start/End: Complemental strand, 41348352 - 41348235
Alignment:
Q  337 agagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaa 436  Q
    ||||| ||||| | ||||||| ||  ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |    
T  41348352 agagaggaccacattaataaatggaggaagacttatgggatcaaattgacacacttaatagttaagggatcaaactgagaaaataaaataagttaaagga 41348253  T
Q  437 ccggaggatgtattaagc 454  Q
    || | |||||||||||||    
T  41348252 ccaggggatgtattaagc 41348235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 334 - 454
Target Start/End: Complemental strand, 34438522 - 34438402
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    ||||||||  ||||||||| |||||||||||||| |||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||    
T  34438522 aacagagagaaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaagggactaaactgagaaaataaaataagttaag 34438423  T
Q  434 gaaccggaggatgtattaagc 454  Q
      | |||  ||||||||||||    
T  34438422 agatcgggagatgtattaagc 34438402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 34439664 - 34439780
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||||| ||| || |||||||||||| || ||||||||||||||||||||||||| ||    
T  34439664 gagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgaaacattttatagttaagggaccacactgagaaaataaaataagttaagggac 34439763  T
Q  438 cggaggatgtattaagc 454  Q
     |  |||||||||||||    
T  34439764 tgagggatgtattaagc 34439780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 38417665 - 38417549
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||| ||||| |||||| || |||| |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||| | ||    
T  38417665 gagaggaccgaaatagtaaacgacataagatttatgggaccaaattgacacacttaatagttaagggaccaaactgagaaaataaaataagttaaaggac 38417566  T
Q  438 cggaggatgtattaagc 454  Q
     ||||||||||||||||    
T  38417565 aggaggatgtattaagc 38417549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 343 - 454
Target Start/End: Original strand, 43419384 - 43419495
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    ||||||||||   |||||||||||||||| |||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||| |||||      
T  43419384 gaccaaaataggtaacggcagaagagttaagggaccaaattgagacactttatagttaagggacgaaactgagaaaataaaataagttaagggaccggga 43419483  T
Q  443 gatgtattaagc 454  Q
    ||||||||||||    
T  43419484 gatgtattaagc 43419495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 334 - 434
Target Start/End: Complemental strand, 50530619 - 50530519
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||| |||||||||||| ||||||  ||||||||||||||| ||  |||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  50530619 aacagaaatgaccaaaatagtaaacgatagaagagttatgggaccattttgagacacttaatagttaaaggaccaaactgagaaaataaaataagttaag 50530520  T
Q  434 g 434  Q
    |    
T  50530519 g 50530519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 363 - 454
Target Start/End: Original strand, 41349554 - 41349645
Alignment:
Q  363 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||  | |||||||||||    
T  41349554 gaagatttatgggatcaaattgacacacttaaaagttaagggatcaaactgagaaaataaaataagttaagggaccgttgaatgtattaagc 41349645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 343 - 454
Target Start/End: Complemental strand, 17319149 - 17319038
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||| |||||| ||||||| |||||| | |||||||| |||||| ||||||||| ||||||||||||||| ||||||||||||||  |||||      
T  17319149 gaccaaaatagtaaacgccagaagatttatggaaccaaattgaaacactttatagttaagagatcaaactgagaaattaaaataagttaagagaccgggt 17319050  T
Q  443 gatgtattaagc 454  Q
    ||||||||||||    
T  17319049 gatgtattaagc 17319038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 338 - 452
Target Start/End: Original strand, 38419021 - 38419135
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||||||| |||| | |||||||||||||| ||||| || |||||||| |||||||||| |||||| || |||||||||||||||||||||||||| |||    
T  38419021 gagatgactaaaacagtaaacggcagaagacttatgagaccaaattgacacacttaataattaaggaattaaactgagaaaataaaataagttaagtaac 38419120  T
Q  438 cggaggatgtattaa 452  Q
    ||  |||| ||||||    
T  38419121 cgtgggatatattaa 38419135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 33377368 - 33377484
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| |||||||||||||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| ||    
T  33377368 gagaggaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatcaaaaataagttaagggac 33377467  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  33377468 caaatgatgtattaagc 33377484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 11482868 - 11482792
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||| ||||||||||||||| |||||||||||| ||||||||||||||| |||||  ||||||||||||    
T  11482868 caaattgaaacatttaatagttaagggaccaaactgagaaattaaaataagttaagggaccgggagatgtattaagc 11482792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 405
Target Start/End: Complemental strand, 5687287 - 5687220
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaaggga 405  Q
    ||||||||||||||| ||||||||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  5687287 gagatgaccaaaatagtaaacggcaaaagatttatgggaccaaattgagacactttatagttaaggga 5687220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 399 - 454
Target Start/End: Original strand, 44160475 - 44160530
Alignment:
Q  399 taagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  44160475 taagggaccaaactgagaaaataaaataagttaagggaccggaggatgtattaagc 44160530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 6140216 - 6140325
Alignment:
Q  226 attataagttacaatagatttctccttgatccaacggtctttatttnnnnnnnntatcaaatggttaaaaataaaagatttaataaggtctatggtggac 325  Q
    |||||||| ||||||||||  |||| ||||||||||||||  ||||         ||||||  |||||||||||||||||||||||||||||||||||||    
T  6140216 attataagctacaatagatccctccatgatccaacggtctccatttaaaaaaaagatcaaactgttaaaaataaaagatttaataaggtctatggtggac 6140315  T
Q  326 cacctataaa 335  Q
     |||||||||    
T  6140316 tacctataaa 6140325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 341 - 454
Target Start/End: Complemental strand, 11113851 - 11113738
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccgg 440  Q
    |||||||||||  |||||||||||||||||||| || ||||||||||||||| ||||||||||||  ||| ||| ||   |||||||||||||  |||      
T  11113851 atgaccaaaatggtaaacggcagaagagttatgagaccaaattgagacactttatagttaagggactaaaatgaaaaccgaaaataagttaagtgaccaa 11113752  T
Q  441 aggatgtattaagc 454  Q
    | ||||||||||||    
T  11113751 atgatgtattaagc 11113738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 434
Target Start/End: Original strand, 26393138 - 26393227
Alignment:
Q  345 ccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||  |||||| |||||||||||||||| ||||||||||||||| |||||||| |||||||| | | || | ||||||||||||||    
T  26393138 ccaaaatggtaaacgacagaagagttatgggaccaaattgagacactttatagttaaaggatcaaaataaaaataaaaaataagttaagg 26393227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 43418105 - 43418029
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||||| |||| | || || |||||||||||||    
T  43418105 caaattgaaacactttatagttaagggaccaaactgagaaaataaaataatttaaaggactgggggatgtattaagc 43418029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 391 - 454
Target Start/End: Complemental strand, 26045191 - 26045128
Alignment:
Q  391 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||||||||| || ||||||||| ||||||||||||||| ||||| |||||||||||||    
T  26045191 ttaatagttaagggaccacactgagaaattaaaataagttaagggaccgggggatgtattaagc 26045128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 391 - 454
Target Start/End: Original strand, 47573701 - 47573764
Alignment:
Q  391 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||||||||| || ||||||||| ||||||||||||||| ||||| |||||||||||||    
T  47573701 ttaatagttaagggaccacactgagaaattaaaataagttaagggaccgggggatgtattaagc 47573764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 343 - 454
Target Start/End: Complemental strand, 56000394 - 56000283
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||  ||||||||||||||||||| |||  |||||||||||||| ||||||| ||||||||| ||| ||   |||||||||||||| | |  ||    
T  56000394 gaccaaaatggtaaacggcagaagagttataggactaaattgagacactttatagttaggggatcaaaatgaaaatcaaaaataagttaagggatcaaag 56000295  T
Q  443 gatgtattaagc 454  Q
     |||||||||||    
T  56000294 catgtattaagc 56000283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 436
Target Start/End: Original strand, 15787506 - 15787604
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaa 436  Q
    |||| |||||||||  ||||||||| || |||||||||| ||||||||||||||| ||||||| |||| |||| ||| || | ||||||| ||||||||    
T  15787506 gagaggaccaaaatggtaaacggcaaaaaagttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaacaaaaaataaattaaggaa 15787604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 452
Target Start/End: Original strand, 30683031 - 30683145
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||| ||| |||||| ||||| |||||||| ||||||||||||||| |||||||||||| |||| ||| ||   ||||||| |||||| ||    
T  30683031 gagaagaccaaaagaattaacggccgaagatttatgggaccaaattgagacactttatagttaagggaccaaaatgaaaatcaaaaataaattaagggac 30683130  T
Q  438 cggaggatgtattaa 452  Q
    |  || |||||||||    
T  30683131 caaagcatgtattaa 30683145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 454
Target Start/End: Original strand, 11114991 - 11115100
Alignment:
Q  345 ccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggagga 444  Q
    |||||||  |||||| |||||||||||||||| |||||||||| |||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  | ||    
T  11114991 ccaaaatggtaaacgacagaagagttatgggaccaaattgagatactttatagttaggggaccaaaatgaaaactgaaaataagttaagggaccaaatga 11115090  T
Q  445 tgtattaagc 454  Q
    ||||||||||    
T  11115091 tgtattaagc 11115100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 454
Target Start/End: Complemental strand, 15787049 - 15786948
Alignment:
Q  353 ataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 452  Q
    ||||||||||||| |||||||||| |||||||||||| || ||||||| |||| |||| ||| || | |||||||||||| | |||  | ||||||||||    
T  15787049 ataaacggcagaaaagttatgggaccaaattgagacagtttatagttaggggaacaaaatgaaaacaaaaaataagttaatggaccaaatgatgtattaa 15786950  T
Q  453 gc 454  Q
    ||    
T  15786949 gc 15786948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 434
Target Start/End: Complemental strand, 5417380 - 5417320
Alignment:
Q  374 ggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||||||| ||| ||||||||||||||| |||||||| ||| |||||||||||||||    
T  5417380 ggatcaaattgaaacatttaatagttaagggaccaaactgaaaaattaaaataagttaagg 5417320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 37559110 - 37558994
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||||| |||||||   |||  |||||||| |||||||||||| || ||||||| |||| |||| ||| ||   |||||||||||||||||    
T  37559110 gagatgaccaaaatagtaaacggtgtaaggtttatgggaccaaattgagacattttatagttaggggaccaaattgaaaaccaaaaataagttaaggaac 37559011  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  37559010 caaatgatgtattaagc 37558994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 43708908 - 43708832
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||| ||||||||||| |||  ||||||||||| ||||||||||||||  ||||| |||||||||||||    
T  43708908 caaattgaaacatttaatagttaatggactaaactgagaaattaaaataagttaagagaccgggggatgtattaagc 43708832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 334 - 454
Target Start/End: Original strand, 47668597 - 47668717
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||| |||||||| ||||||||||||| ||  || |||| ||| ||||||||||| ||||||| |||| |||| ||| || | ||||||||||||     
T  47668597 aacagagaggaccaaaacaataaacggcagatgatataagggaccaatttgagacactttatagttaggggaccaaagtgaaaacagaaaataagttaaa 47668696  T
Q  434 gaaccggaggatgtattaagc 454  Q
    | |||  | ||||||||||||    
T  47668697 ggaccaaatgatgtattaagc 47668717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 410
Target Start/End: Original strand, 28103495 - 28103562
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||||||||  |||||||||||||  |||||||| ||||||||||||||| |||||||||||| ||||    
T  28103495 gaccaaaatggtaaacggcagaagtcttatgggaccaaattgagacactttatagttaagggaccaaa 28103562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 26393037 - 26393091
Alignment:
Q  280 tatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataa 334  Q
    |||||||||||||||| ||||| | ||| ||||||||||||||||||||||||||    
T  26393037 tatcaaatggttaaaattaaaaaacttagtaaggtctatggtggaccacctataa 26393091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 432
Target Start/End: Original strand, 44304983 - 44305077
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    ||||||||||||||| ||||| || ||||| |||| ||| |||||||||||||||  |||||| |||| |||| ||| || | ||||||||||||    
T  44304983 gagatgaccaaaatagtaaacagcggaagatttataggaccaaattgagacactttgtagttaggggaccaaattgaaaacaaaaaataagttaa 44305077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 378 - 452
Target Start/End: Original strand, 50498016 - 50498090
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 452  Q
    |||||||| ||  |||||| |||||||| || ||||||||| |||||||||| |||| |||||||||||||||||    
T  50498016 caaattgaaacgtttaataattaagggaccacactgagaaattaaaataagtgaagggaccggaggatgtattaa 50498090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 50530700 - 50530654
Alignment:
Q  289 gttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||    
T  50530700 gttaaaaataaaaaatttaataaggtctatggtggactacctataaa 50530654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 410
Target Start/End: Original strand, 5688641 - 5688713
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    ||||||||||||||| |||||| || |||| |||||| | ||||||||||||||| ||||||| |||| ||||    
T  5688641 gagatgaccaaaatagtaaacgacataagatttatggaaccaaattgagacactttatagttaggggaccaaa 5688713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 454
Target Start/End: Complemental strand, 27408871 - 27408759
Alignment:
Q  342 tgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccgga 441  Q
    ||||||||||  ||||||| |||||| |||||||| ||||||||||||||| |||||||   || |||| ||| ||   |||||||||||||| |||  |    
T  27408871 tgaccaaaatggtaaacggaagaagatttatgggaccaaattgagacactttatagttagatgaccaaattgaaaactgaaaataagttaagggaccaaa 27408772  T
Q  442 ggatgtattaagc 454  Q
     ||||||||||||    
T  27408771 tgatgtattaagc 27408759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 29663738 - 29663683
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    ||||||||||||||||||||||| |||||||||||| || |||||| ||||||||||    
T  29663738 taaacggcagaagagttatgggaccaaattgagacaatttatagtt-agggatcaaa 29663683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 454
Target Start/End: Original strand, 29834432 - 29834552
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    ||||||||||||||||| |   ||||||||||||  || ||||||||||||||| || | ||||||| ||||||||| ||| |    |||||||||||||    
T  29834432 aacagagatgaccaaaagaggtaacggcagaagacataagggatcaaattgagatacattatagttaggggatcaaaatgaaatccgaaaataagttaag 29834531  T
Q  434 gaaccggaggatgtattaagc 454  Q
    | |||  || |||||||||||    
T  29834532 ggaccaaagcatgtattaagc 29834552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 37560303 - 37560419
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||| ||| |||||| |  |||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| ||    
T  37560303 gagaggaccaagatagtaaacgtcgtaagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggac 37560402  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  37560403 caaatgatgtattaagc 37560419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 43709918 - 43709993
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||  |||||||||||||||  | ||||||||| ||||||||||||||| ||||| |||||||||||||    
T  43709918 caaattgaaacgtttaatagttaagggactacactgagaaattaaaataagttaagggaccgg-ggatgtattaagc 43709993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 46796030 - 46796146
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| ||||| |||| |||||||  ||||| |||||||| ||||||||||||||| ||||||| |||| |||| | | ||   |||||||||||||| ||    
T  46796030 gagaggaccacaatagtaaacggaggaagacttatgggaccaaattgagacactttatagttaggggaccaaaattaaaaccaaaaataagttaagggac 46796129  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  46796130 caaacgatgtattaagc 46796146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 434
Target Start/End: Complemental strand, 47243024 - 47242968
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||| | ||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  47243024 caaattaaaacatttaatagttaagggattaaactgagaaattaaaataagttaagg 47242968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 47572658 - 47572583
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||| |||||||||||||||  || |||||||| ||||||||||||||| | ||| |||||||||||||    
T  47572658 caaattgaaacatttaatagttaagggactaagctgagaaattaaaataagttaagggatcgg-ggatgtattaagc 47572583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 50497067 - 50496991
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||| | ||| ||||||||||||| |  ||||||||||| ||||||||||| ||| || ||||||||||||||||    
T  50497067 caaattaaaacatttaatagttaaggaactaaactgagaaattaaaataagttgagggactggaggatgtattaagc 50496991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 21104319 - 21104414
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaacc 438  Q
    |||||||||  |||||| |||||||  |||| || ||||||||||||||| ||||||| |||| |||| ||| || | ||||||| ||||||||||    
T  21104319 gaccaaaatggtaaacgacagaagacatatgagaccaaattgagacactttatagttaggggaccaaaatgaaaacaaaaaataatttaaggaacc 21104414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 434
Target Start/End: Original strand, 55953861 - 55953952
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||||| ||||||||| |||| ||| |||| |||||||||||| || ||||||| |||| |||| ||| ||   ||||||||||||||    
T  55953861 gaccaaaatagtaaacggcataagatttacgggaccaaattgagacattttatagttatgggaccaaattgaaaatcaaaaataagttaagg 55953952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 400
Target Start/End: Original strand, 307809 - 307871
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    |||||||||| |||| |||| ||  ||||| |||||||||||||||||||||||| |||||||    
T  307809 gagatgaccacaatagtaaatggaggaagacttatgggatcaaattgagacactttatagtta 307871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 3533518 - 3533572
Alignment:
Q  280 tatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataa 334  Q
    |||||||||||||||| ||||| | ||| |||||||||||||||||| |||||||    
T  3533518 tatcaaatggttaaaattaaaaaacttagtaaggtctatggtggaccgcctataa 3533572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 432
Target Start/End: Complemental strand, 17494239 - 17494145
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    ||||| ||||| ||| ||||||||| ||||  || | || |||||| | ||||||||||||||||||| |||| ||||||| |||||||| ||||    
T  17494239 gagataaccaatatagtaaacggcataagacataagagaccaaattaaaacacttaatagttaagggaccaaaatgagaaattaaaataaattaa 17494145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 44302925 - 44302871
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||| ||||| |||||||| ||||||||||| ||||||| ||||    
T  44302925 atcaaatggttaaaattaaaaaatttaatacggtctatggtgaaccacctttaaa 44302871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 403
Target Start/End: Complemental strand, 48206269 - 48206207
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagg 403  Q
    |||||||||||| ||||||| |||| |||||| |||||||||||| |||||| ||| ||||||    
T  48206269 atgaccaaaatagtaaacggtagaaaagttataggatcaaattgaaacactttataattaagg 48206207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 405
Target Start/End: Complemental strand, 55952932 - 55952870
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaaggga 405  Q
    ||||||||||||||||| || |||||||||| || |||||||| |||||| ||||||| ||||    
T  55952932 gaccaaaataataaacgacataagagttatgagaccaaattgaaacactttatagttagggga 55952870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 56000493 - 56000439
Alignment:
Q  280 tatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataa 334  Q
    |||||||||||||||| ||||| | ||| ||||||||| ||||||||||||||||    
T  56000493 tatcaaatggttaaaattaaaaaacttagtaaggtctacggtggaccacctataa 56000439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 392
Target Start/End: Original strand, 31712503 - 31712564
Alignment:
Q  331 ataaacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacactt 392  Q
    |||||| || |||||||||||  ||||||| |||||| ||||||||||||||||| ||||||    
T  31712503 ataaacggaaatgaccaaaatggtaaacggaagaagacttatgggatcaaattgaaacactt 31712564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 410
Target Start/End: Original strand, 1273437 - 1273509
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||| ||||||||||  ||||| || |||| |||||||| ||||||||||||||| ||||||| |||| ||||    
T  1273437 gagaggaccaaaatagcaaacgacataagacttatgggaccaaattgagacactttatagttaggggaccaaa 1273509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 6616215 - 6616331
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||| |||||||| ||||| |  || |||| ||| ||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| ||    
T  6616215 gagaggaccaaaacaataaacgacagaatatataagggaccaatttgagacactttatagttaggggaccaaagtgaaaacggaaaataagttaagggac 6616314  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  6616315 caaatgatgtattaagc 6616331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 38370394 - 38370278
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||||  |||||| ||||||||||||| || |||||||| |||||| || ||||   || |||| ||| ||   |||||||||||||| ||    
T  38370394 gagatgaccaaaatggtaaacgacagaagagttatgagaccaaattgatacactttatcgttagatgaccaaattgaaaatgaaaaataagttaagggac 38370295  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  38370294 caaacgatgtattaagc 38370278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 410
Target Start/End: Original strand, 40146627 - 40146699
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||||||||| | || ||| ||| |||||| |||||||| ||||||||||||||| |||||||| ||| ||||    
T  40146627 gagatgaccacattagtaatcggaagaagacttatgggaccaaattgagacactttatagttaaaggaccaaa 40146699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 44128338 - 44128454
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| ||||||||| |||| |||  |||  |||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||| | ||    
T  44128338 gagaggaccaaaatagtaaacggcataagatttaaaggactaaattgagacactttatagttaggggaccaaattgaaaatgaaaaataagttaaaggac 44128437  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  44128438 caaacgatgtattaagc 44128454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 56296399 - 56296347
Alignment:
Q  280 tatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctat 332  Q
    |||||||||||||||| ||||| | ||| ||||||||||||| ||||||||||    
T  56296399 tatcaaatggttaaaattaaaaaacttagtaaggtctatggtagaccacctat 56296347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 1794621 - 1794574
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccac 328  Q
    |||||| |||| ||| ||||| ||||||||||||||||||||||||||    
T  1794621 atcaaacggtttaaattaaaaaatttaataaggtctatggtggaccac 1794574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 434
Target Start/End: Original strand, 3533617 - 3533708
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||||  ||||| | ||||||||||| ||| ||||||||||||||| ||||||| | |||| || ||| ||   ||||||||||||||    
T  3533617 gaccaaaatggtaaacagtagaagagttatcggaccaaattgagacactttatagttaggtgatcgaaatgaaaattaaaaataagttaagg 3533708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 328
Target Start/End: Original strand, 35350021 - 35350064
Alignment:
Q  285 aatggttaaaaataaaagatttaataaggtctatggtggaccac 328  Q
    ||||||||||| ||||||| |||||||| |||||||||||||||    
T  35350021 aatggttaaaattaaaagaattaataagatctatggtggaccac 35350064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 328
Target Start/End: Original strand, 39057680 - 39057723
Alignment:
Q  285 aatggttaaaaataaaagatttaataaggtctatggtggaccac 328  Q
    ||||||||||| ||||||| |||||||| |||||||||||||||    
T  39057680 aatggttaaaattaaaagaattaataagatctatggtggaccac 39057723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 454
Target Start/End: Original strand, 47244047 - 47244110
Alignment:
Q  391 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||||||||| || ||||||||| |||||||| |||||| | ||  |||||||||||||    
T  47244047 ttaatagttaagggaccacactgagaaattaaaataaattaagggatcgagggatgtattaagc 47244110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 327
Target Start/End: Original strand, 2293436 - 2293482
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggacca 327  Q
    ||||||||||||||| ||||| |||||||||||  ||||||||||||    
T  2293436 atcaaatggttaaaattaaaaaatttaataaggcatatggtggacca 2293482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 387
Target Start/End: Original strand, 6140367 - 6140413
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgaga 387  Q
    |||||||||||| |||||| |||||||||||||| | ||||||||||    
T  6140367 atgaccaaaatagtaaacgacagaagagttatggaaccaaattgaga 6140413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 29687889 - 29687943
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||| | ||| |||||||||||| || |||||||||||| ||||    
T  29687889 atcaaatggttaaaacttaaaaatttaataaggtttacggtggaccacctttaaa 29687943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 392
Target Start/End: Complemental strand, 33376330 - 33376276
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacactt 392  Q
    |||| ||| |||||| |||||| ||||||| |||||||| |||||||||||||||    
T  33376330 gagaggactaaaatagtaaacgacagaagatttatgggaccaaattgagacactt 33376276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 38418928 - 38418982
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||||||||||||  |||| ||||| |||||  ||||||||||||||||||||    
T  38418928 atcaaatggttaaaataaaaaaatttagtaaggcatatggtggaccacctataaa 38418982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 387
Target Start/End: Complemental strand, 26788634 - 26788585
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgaga 387  Q
    |||| |||||||||| |||||||||||||| ||||||||  |||||||||    
T  26788634 gagaggaccaaaatagtaaacggcagaagatttatgggacgaaattgaga 26788585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 35787994 - 35787945
Alignment:
Q  288 ggttaaaaataaaagatttaataaggtctatggtggaccacctataaaca 337  Q
    |||||||| | ||| ||||||||| |||||||||||||||||| ||||||    
T  35787994 ggttaaaatttaaaaatttaataaagtctatggtggaccacctttaaaca 35787945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 454
Target Start/End: Original strand, 38371844 - 38371925
Alignment:
Q  373 gggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| |||||||  ||  |||||| ||||||||||||| || | |||||||||||||  |||| | ||||||||||||    
T  38371844 gggatcaatttgagacgttttttagttaggggatcaaactgaaaacagaaaataagttaagagaccgaatgatgtattaagc 38371925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Complemental strand, 44302811 - 44302770
Alignment:
Q  359 ggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    ||||||| | |||||||||||||||||||||||| |||||||    
T  44302811 ggcagaaaatttatgggatcaaattgagacactttatagtta 44302770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 454
Target Start/End: Original strand, 56001303 - 56001388
Alignment:
Q  369 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||| ||| ||||||||||||||| ||||||| |||  |||| ||| || | |||||||||||||| |||  || |||||||||||    
T  56001303 ttataggaccaaattgagacactttatagttagggggccaaaatgaaaataaaaaataagttaagggaccaaagcatgtattaagc 56001388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 454
Target Start/End: Original strand, 26059842 - 26059903
Alignment:
Q  391 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||||| |||  ||||||||||| |||||||| |||||| ||  |||||||||||||||    
T  26059842 ttaatagttaatggactaaactgagaaattaaaataaattaagggac--gaggatgtattaagc 26059903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 454
Target Start/End: Complemental strand, 31711188 - 31711088
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 453  Q
    |||||| || |||| ||||| || ||||||||||||||| |||||||| ||| |||| ||| |    |||||||||||||| |||  | |||||||||||    
T  31711188 taaacgacataagacttatgagaccaaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaag 31711089  T
Q  454 c 454  Q
    |    
T  31711088 c 31711088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 337
Target Start/End: Original strand, 39592200 - 39592256
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaaca 337  Q
    |||||| |||||||| | ||| |||||||||||| |||| |||||||||| ||||||    
T  39592200 atcaaaaggttaaaatttaaaaatttaataaggtatatgatggaccacctttaaaca 39592256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 48413595 - 48413671
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||  ||||||||||||| | || |||| |||| ||||||||||||||| | ||  |||||||||||||    
T  48413595 caaattgaaacgtttaatagttaaggaaccacactgggaaattaaaataagttaagggatcgagggatgtattaagc 48413671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 454
Target Start/End: Complemental strand, 52659007 - 52658907
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 453  Q
    |||||||||||||| |||| | | |||||||| ||| || ||||||| |||| |||| ||| || | |||||||||||||| |||  |  ||||||||||    
T  52659007 taaacggcagaagatttatagaaccaaattgaaacattttatagttaggggaccaaagtgaaaataaaaaataagttaagggaccaaaacatgtattaag 52658908  T
Q  454 c 454  Q
    |    
T  52658907 c 52658907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 77; Significance: 2e-35; HSPs: 4)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 150 - 335
Target Start/End: Complemental strand, 16283 - 16096
Alignment:
Q  150 gatgaataaagatgagagttttatttggagatgatttagggaagatgatggaggaaaaaattaaggg--ttgttattcattataagttacaatagatttc 247  Q
    |||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| | |||   ||||  ||||||| ||| |||||||||| ||    
T  16283 gatgaataaagatgagagttttattttgggatgatttagggaagaagatggaggaaaaaaattaggtgtttgtggttcattacaagctacaatagatctc 16184  T
Q  248 tccttgatccaacggtctttatttnnnnnnnntatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    | ||||||||||| ||||  | ||        ||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||    
T  16183 tacttgatccaacagtctccaatttaaaaaaatatcaaacggttaaaaataaaaggtttaataaggtctatggtggaccatctataaa 16096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 337 - 454
Target Start/End: Original strand, 17163 - 17280
Alignment:
Q  337 agagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaa 436  Q
    ||||| ||| |||||| |||| | |||||||||||| |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| | |    
T  17163 agagaggactaaaatagtaaatgacagaagagttattggattaaattgagacacttaatagttaagggaccaaactgaaaaaataaaataagttaaagga 17262  T
Q  437 ccggaggatgtattaagc 454  Q
    |||| | |||||||||||    
T  17263 ccggggtatgtattaagc 17280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 454
Target Start/End: Complemental strand, 16011 - 15946
Alignment:
Q  389 acttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||| |||| ||||||| |||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  16011 actttatagctaagggaccaaagtgaaaaaataaaataagttaagggaccggaggatgtattaagc 15946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 16419 - 16323
Alignment:
Q  12 agagagggagaatgagaatgtttg--tttttaggaatgattctgatagtaannnnnnnn---aagaatgttaaggaaaatgaaaggaagatgatgat 103  Q
    ||||| |||||||||||||||||   ||||||||||||||||||||||||            |||||||||||||||||||||| ||||||||||||    
T  16419 agagaaggagaatgagaatgttttattttttaggaatgattctgatagtattttttttttttaagaatgttaaggaaaatgaaatgaagatgatgat 16323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 95)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 147 - 335
Target Start/End: Original strand, 13366827 - 13367015
Alignment:
Q  147 gatgatgaataaagatgagagttttatttggagatgatttagggaagatgatggaggaaaaaattaag-ggttgttattcattataagttacaatagatt 245  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||||||  |||||||||||||||| | | ||||  ||||||| ||| ||||||||||     
T  13366827 gatgatgaataaagatgagagttttattttgggatgagttagggaagaaaatggaggaaaaaattaggtgtttgtggttcattacaagctacaatagatc 13366926  T
Q  246 tctccttgatccaacggtctttatttnnnnnnnntatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||| ||||||||||| ||||  | ||        ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13366927 tctacttgatccaacagtctccaatt-aaaaaaatatcaaacggttaaaaataaaaggtttaataaggtctatggtggaccacctataaa 13367015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 343 - 454
Target Start/End: Complemental strand, 8095453 - 8095343
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||| |||||| || |||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |    
T  8095453 gaccaaaatagtaaacgacaaaagagtaatgggaccaaattgagacacttaatagttaagggaccaaactgagaaaataaaataagttaagggaccgg-g 8095355  T
Q  443 gatgtattaagc 454  Q
    ||||||||||||    
T  8095354 gatgtattaagc 8095343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 13367054 - 13367170
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| |||||||||||||| |||||||| |||||| | |||||| |||||||||||| |||| ||| |||||||||||||||||||| |    
T  13367054 gagaggaccaaaatagtaaacggcagaagatttatgggaccaaattaaaacactttatagttaagggaccaaagtgaaaaaataaaataagttaaggatc 13367153  T
Q  438 cggaggatgtattaagc 454  Q
    |||| ||||||||||||    
T  13367154 cggatgatgtattaagc 13367170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 334 - 454
Target Start/End: Original strand, 22621134 - 22621254
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||| ||||| | |||||||| |  ||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  22621134 aacagagaggaccacattaataaacagaggaagacttatgggaccaaattgccacacttaatagttaagggatcaaactgagaaaataaaataagttaag 22621233  T
Q  434 gaaccggaggatgtattaagc 454  Q
    | ||||  |||||||||||||    
T  22621234 ggaccgagggatgtattaagc 22621254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 363 - 454
Target Start/End: Complemental strand, 22619982 - 22619891
Alignment:
Q  363 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  22619982 gaagatttatgggaccaaattgacacacttaaaagttaagggatcaaactgagaaaataaaataagttaagggaccgtgggatgtattaagc 22619891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 145 - 335
Target Start/End: Complemental strand, 8095690 - 8095497
Alignment:
Q  145 aagatgatgaataaagatgagagttttatttggagatgatttagggaagatgatggaggaaaaaattaag-ggttgttattcattataagttacaataga 243  Q
    |||||||||||||||  |||||||||||||||| |||||||| ||||||| ||||||||||||||||| | | ||||  || |||||||  |||||||||    
T  8095690 aagatgatgaataaatttgagagttttatttggggatgattttgggaagaagatggaggaaaaaattaggtgtttgtggtttattataacctacaataga 8095591  T
Q  244 tttctccttgatccaacggtctttattt--nnnnnnnntatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    | |||| |||||||||||||||  ||||           |||||||||||||| ||| ||||||||||||||| ||||||| | ||||||||||    
T  8095590 tctctctttgatccaacggtctccatttgaagaaaaaaaatcaaatggttaaagatacaagatttaataaggtatatggtgcatcacctataaa 8095497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 341 - 454
Target Start/End: Original strand, 34617202 - 34617315
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccgg 440  Q
    ||||||||||| |||||||| ||||||| |||||||  ||||||| ||||||||||||||| ||||||||||| ||||| |||| ||||||||| |||||    
T  34617202 atgaccaaaatgataaacggaagaagagctatgggactaaattgacacacttaatagttaatggatcaaactgggaaaaaaaaaaaagttaagggaccgg 34617301  T
Q  441 aggatgtattaagc 454  Q
     | |||||||||||    
T  34617302 ggaatgtattaagc 34617315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 341 - 433
Target Start/End: Complemental strand, 20308714 - 20308622
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||||||| |||||| ||||||||||||| || |||||||||||||||||||||||||  |  ||||||||||||||||||||||||||    
T  20308714 atgaccaaaatagtaaacgacagaagagttatgagaccaaattgagacacttaatagttaagatactaaactgagaaaataaaataagttaag 20308622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 341 - 433
Target Start/End: Complemental strand, 21095347 - 21095255
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||||||| |||||| ||||||||||||| || |||||||||||||||||||||||||  |  ||||||||||||||||||||||||||    
T  21095347 atgaccaaaatagtaaacgacagaagagttatgagaccaaattgagacacttaatagttaagatactaaactgagaaaataaaataagttaag 21095255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 364 - 454
Target Start/End: Complemental strand, 34616215 - 34616125
Alignment:
Q  364 aagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||| |||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| | | || ||||||||||||    
T  34616215 aagatttatgggaccaaattgagacactttatagttaagagatcaaactgagaaaataaaataagttaagggatcagatgatgtattaagc 34616125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 334 - 434
Target Start/End: Original strand, 2421293 - 2421393
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||| ||| ||||||||||||||||||||||||| || ||||| |||||||| |||||||||| ||||||||  ||||||| ||| ||||||||||||||    
T  2421293 aacaaagaggaccaaaataataaacggcagaagatttctgggaccaaattgaaacacttaatatttaagggactaaactgataaattaaaataagttaag 2421392  T
Q  434 g 434  Q
    |    
T  2421393 g 2421393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 334 - 454
Target Start/End: Original strand, 37276243 - 37276363
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||| |||||| ||||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||||||| ||| ||   ||||||| |||||    
T  37276243 aacagagaggaccaatataataaacggcaaaagatttatgggaccaaattgagacactttatagttaagggatcaaagtgaaaatcaaaaataaattaag 37276342  T
Q  434 gaaccggaggatgtattaagc 454  Q
    | |||  | ||||||||||||    
T  37276343 ggaccaaatgatgtattaagc 37276363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 343 - 434
Target Start/End: Original strand, 24069455 - 24069546
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||||  ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| ||   ||||||||||||||    
T  24069455 gaccaaaatggtaaacggcagaagagttatgggaccaaattgagacactttatagttaagggatcaaaatgaaaaccaaaaataagttaagg 24069546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 354 - 452
Target Start/End: Original strand, 41522708 - 41522806
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 452  Q
    |||||||||||||| |||| ||| |||||||| |||||||||||||||  ||| ||||||||||||||||||||||||||| | ||  |||||||||||    
T  41522708 taaacggcagaagacttataggaccaaattgacacacttaatagttaaatgattaaactgagaaaataaaataagttaagggatcgagggatgtattaa 41522806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 8096549 - 8096665
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| ||||||| | |||||||||| || |||||| |||| ||||||||||||| ||  ||||||| ||||||||||||||||||| ||    
T  8096549 gagaggaccaaaatagtaaacggtaaaagagttatgagaccaaattaagacgcttaatagttaagagactaaactgaaaaaataaaataagttaagggac 8096648  T
Q  438 cggaggatgtattaagc 454  Q
      | |||||||||||||    
T  8096649 taggggatgtattaagc 8096665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 374 - 454
Target Start/End: Complemental strand, 22913268 - 22913188
Alignment:
Q  374 ggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||||||| ||| ||| ||||||||||||| |||||||||| ||||||||||||||||| || ||||||||||||||    
T  22913268 ggatcaaattgaaacatttactagttaagggatccaactgagaaattaaaataagttaaggaatcgaaggatgtattaagc 22913188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 334 - 433
Target Start/End: Complemental strand, 39220795 - 39220696
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    ||||||||| || |||||| |||||||||||||| ||| || |||||||||| |||||||||||||||  || |||| ||||||| ||||||||||||||    
T  39220795 aacagagataacgaaaatagtaaacggcagaagacttaaggaatcaaattgaaacacttaatagttaatagaccaaaatgagaaattaaaataagttaag 39220696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 9190486 - 9190561
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||| |||||||||||||||  ||||||||||| ||||||||||||||||||||| |||||||||||||    
T  9190486 caaattgaaacatttaatagttaagggactaaactgagaaattaaaataagttaaggaaccgg-ggatgtattaagc 9190561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 36940037 - 36940153
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||||| |||||||||||||| |||||  | |||||||| |||||| ||||||| ||||||||| ||| ||   |||||||||||||| ||    
T  36940037 gagatgaccaaaatagtaaacggcagaagatttatgataccaaattgaaacactttatagttaggggatcaaagtgaaaaccaaaaataagttaagggac 36940136  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  36940137 caaatgatgtattaagc 36940153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 38591011 - 38591127
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| ||||||||| |||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| ||    
T  38591011 gagaggaccaaaatagtaaacggcataagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatcaaaaataagttaagggac 38591110  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  38591111 caaatgatgtattaagc 38591127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 410
Target Start/End: Complemental strand, 36070285 - 36070218
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| |||| ||||    
T  36070285 gaccaaaatagtaaacggcagaagatttatgggatcaaattgagacactttatagttaggggaccaaa 36070218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 454
Target Start/End: Complemental strand, 43275857 - 43275746
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||||| ||||||| || | |||| ||| || | |||||||||||||  |||  |     
T  43275857 gaccaaaataataaacggcataagagttatgggactaaattgagacactttatagttagggaaccaaattgaaaacaaaaaataagttaagagaccaaat 43275758  T
Q  443 gatgtattaagc 454  Q
    ||||||||||||    
T  43275757 gatgtattaagc 43275746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 44606344 - 44606290
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44606344 atcaaacggttaaaaataaaagatttaacaaggtctatggtggaccacctataaa 44606290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 45195810 - 45195922
Alignment:
Q  340 gatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccg 439  Q
    |||||||||||||   ||||||||||||  ||  |||  |||||||||||||| ||| |||||||| |||||||||||| ||||||||||||||| || |    
T  45195810 gatgaccaaaatagataacggcagaagatataatggactaaattgagacactttatatttaagggaccaaactgagaaattaaaataagttaagggactg 45195909  T
Q  440 gaggatgtattaag 453  Q
    | ||||||||||||    
T  45195910 g-ggatgtattaag 45195922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 9189466 - 9189390
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||  ||||||||||||||| || ||||||||| |||||||| |||||| |||||||||||||||||||    
T  9189466 caaattgaaacgtttaatagttaagggaccacactgagaaattaaaataaattaagggaccggaggatgtattaagc 9189390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 454
Target Start/End: Original strand, 35463037 - 35463109
Alignment:
Q  382 ttgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||| | |||   |||||||||||||    
T  35463037 ttgagacattttatagttaagggatcaaactgagaaaataaaataagttaaaggaccaacggatgtattaagc 35463109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 434
Target Start/End: Complemental strand, 41867010 - 41866910
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    ||||||||||||||||||| |||| |||  || | |||||||| |||||||| |||||| ||||||||||||||||| ||| ||   |||||||||||||    
T  41867010 aacagagatgaccaaaatagtaaatggcgtaaaatttatgggaccaaattgaaacactttatagttaagggatcaaagtgaaaatcaaaaataagttaag 41866911  T
Q  434 g 434  Q
    |    
T  41866910 g 41866910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 335
Target Start/End: Original strand, 2421111 - 2421258
Alignment:
Q  190 gaagatgatggaggaaaaaattaagggtt-gttattcattataagttacaatagatttctccttgatccaacggtctttatttnnnnnnnnt-atcaaat 287  Q
    ||||| ||||||||||||||||| | ||| ||  ||||||||||  |||||||||| |||| ||||||||| |||||  ||||          ||||||     
T  2421111 gaagaagatggaggaaaaaattaggtgtttgtggttcattataaactacaatagatctctcattgatccaatggtctccatttaaagaaaaagatcaaac 2421210  T
Q  288 ggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  2421211 ggttaaaaataaaagatttaataaggtctatgatggaccatctataaa 2421258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 391 - 454
Target Start/End: Complemental strand, 12818813 - 12818750
Alignment:
Q  391 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||| |||| ||||||||    
T  12818813 ttaatagttaagggaccaaactgagaaattaaaataagttaagggaccggtggatatattaagc 12818750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 334 - 433
Target Start/End: Original strand, 36071378 - 36071477
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||||||||||||| |||||||| ||||||||||||||| ||| |||| | |||  |||||||||||| |||| ||| || | || ||||||||||    
T  36071378 aacagagatgaccaaaatgataaacggtagaagagttatgggaccaatttgaaatactctatagttaagggaccaaattgaaaacaaaatataagttaag 36071477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 391 - 453
Target Start/End: Original strand, 23768542 - 23768604
Alignment:
Q  391 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 453  Q
    |||||||| |||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  23768542 ttaatagtgaagggaccaaactgaaaaactaaaataagttaagggaccggaggatgtattaag 23768604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 37274999 - 37274937
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    |||| |||||||||| |||||||||||||| |||||||| ||||||||||||||| |||||||    
T  37274999 gagaggaccaaaatagtaaacggcagaagatttatgggaacaaattgagacactttatagtta 37274937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 31625388 - 31625485
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagga 435  Q
    |||| |||||||||| ||||||||| |||| |||||||| ||||||||||||||| ||| ||| |||| |||| ||| ||   |||||||||||||||    
T  31625388 gagaggaccaaaatagtaaacggcaaaagatttatgggaccaaattgagacactttataattaggggaccaaattgaaaaccaaaaataagttaagga 31625485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 454
Target Start/End: Original strand, 22914230 - 22914310
Alignment:
Q  374 ggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||||||| ||  ||||||||||| |||||||||||| ||| ||||||||||||||| |||||   |||||||||||    
T  22914230 ggatcaaattgaaacgtttaatagttaatggatcaaactgaaaaattaaaataagttaagggaccgggaaatgtattaagc 22914310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 24068442 - 24068326
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| ||||||| || |||||||  ||||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| ||    
T  24068442 gagaggaccaaattagtaaacggaggaagacttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagggac 24068343  T
Q  438 cggaggatgtattaagc 454  Q
    |  || |||||||||||    
T  24068342 caaagcatgtattaagc 24068326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 31624018 - 31623902
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| ||| ||||||||||||| || |||| |||||||| |||||||| |||||| ||||||| |||| |||| ||| ||   |||||||||||||| ||    
T  31624018 gagaggactaaaataataaacgacataagatttatgggaccaaattgaaacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggac 31623919  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  31623918 caaatgatgtattaagc 31623902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 39546681 - 39546797
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||||||||||||   ||||||||| || | |||||||| ||||||||||||||| | ||||| || | |||| ||| || | |||||||||||||||||    
T  39546681 gagatgaccaaaacggtaaacggcataatatttatgggaccaaattgagacactttaaagttagggaaccaaagtgaaaacagaaaataagttaaggaac 39546780  T
Q  438 cggaggatgtattaagc 454  Q
       ||||||||||||||    
T  39546781 aaaaggatgtattaagc 39546797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 434
Target Start/End: Complemental strand, 41521389 - 41521333
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||| | |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  41521389 caaattaacacactttatagttaagggatcaaactgaaaaaataaaataagttaagg 41521333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 362 - 454
Target Start/End: Original strand, 43386730 - 43386822
Alignment:
Q  362 agaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||||||||| |||||||||||| || ||||||| |||| |||||||| ||   |||||||||||||| |||  | ||||||||||||    
T  43386730 agaagagttatgggaccaaattgagacattttatagttaggggaccaaactgaaaaccaaaaataagttaagggaccatatgatgtattaagc 43386822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 454
Target Start/End: Complemental strand, 2419929 - 2419870
Alignment:
Q  395 tagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||||||||||||||||||| |||||||| |||||| |||||  ||||||||||||    
T  2419929 tagttaagggatcaaactgagaaattaaaataaattaagggaccgggagatgtattaagc 2419870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 454
Target Start/End: Original strand, 12820155 - 12820218
Alignment:
Q  391 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||||||||| | |||||||||| ||||||||||| ||| ||||| |||||||||||||    
T  12820155 ttaatagttaagggaccgaactgagaaattaaaataagtttagggaccgggggatgtattaagc 12820218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 19914913 - 19915004
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    |||||||||||  ||||||| |||||| |||||||  ||||||||||||||| |||||||||||| |||| ||| ||   ||||||||||||    
T  19914913 atgaccaaaatggtaaacggtagaagatttatgggtacaaattgagacactttatagttaagggaccaaattgaaaacccaaaataagttaa 19915004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 335
Target Start/End: Complemental strand, 36070372 - 36070329
Alignment:
Q  292 aaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  36070372 aaaaataaaatatttaataaggtctatggtggaccacctataaa 36070329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 189 - 335
Target Start/End: Complemental strand, 19913789 - 19913643
Alignment:
Q  189 ggaagatgatggaggaaaaaattaagggtt-gttattcattataagttacaatagatttctccttgatccaacggtctttatttnnnnnnnntatcaaat 287  Q
    |||||| ||||||||||||||||  | ||| ||  ||||||||||| ||| ||||||  |||||||||||||||||||  ||||        ||||||||    
T  19913789 ggaagaagatggaggaaaaaatttggtgtttgtggttcattataagctacgatagatccctccttgatccaacggtctccatttaaaaaaa-tatcaaat 19913691  T
Q  288 ggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||| |   |||||||||| ||||||||||||||| |||||||    
T  19913690 ggttaaaaacatgtgatttaataaagtctatggtggaccatctataaa 19913643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 24069356 - 24069410
Alignment:
Q  280 tatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataa 334  Q
    |||||||||||||||| ||||| | ||| ||||||||||||||||||||||||||    
T  24069356 tatcaaatggttaaaattaaaaaacttagtaaggtctatggtggaccacctataa 24069410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 35462735 - 35462685
Alignment:
Q  382 ttgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    |||||||| || | |||||||||||||||||||||||||||||||||||||    
T  35462735 ttgagacattttacagttaagggatcaaactgagaaaataaaataagttaa 35462685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 35944105 - 35944059
Alignment:
Q  289 gttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  35944105 gttaaaaataaaagatttaataagatctatggtggatcacctataaa 35944059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 38789162 - 38789064
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaa 436  Q
    ||||||| ||||||||||||| ||| |||| |||| |||||||||||||||  ||||| |||| | ||  ||| ||| |||| ||||||||||||||||    
T  38789162 gagatgatcaaaataataaactgcataagatttataggatcaaattgagacgtttaattgttacgagactaaaatgaaaaaagaaaataagttaaggaa 38789064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 438
Target Start/End: Original strand, 7796815 - 7796911
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaacc 438  Q
    ||||||||||| |||| |||||||||||||||| || ||||||||||||||| ||| |||   ||||||| | | || | ||||||||||||||||||    
T  7796815 atgaccaaaatgataa-cggcagaagagttatgagaccaaattgagacactttataattagatgatcaaaataaaaataaaaaataagttaaggaacc 7796911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 29738408 - 29738287
Alignment:
Q  333 aaacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    |||| |||| ||||||||   |||||||||||||| ||||| ||  |||||||||||||| ||||||||  || |||| ||| || | ||||||||||||    
T  29738408 aaacggagaggaccaaaaaggtaaacggcagaagacttatgagactaaattgagacactttatagttaatagaccaaattgaaaataaaaaataagttaa 29738309  T
Q  433 ggaaccggaggatgtattaagc 454  Q
    || |||  | ||||||||||||    
T  29738308 gggaccaaacgatgtattaagc 29738287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 29739650 - 29739719
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||||||||||  ||||||| |||| | |||||||| ||||||||||||||| ||||||| |||||||||    
T  29739650 atgaccaaaatggtaaacggaagaaaatttatgggaccaaattgagacactttatagttaggggatcaaa 29739719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 35944020 - 35943903
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagaca-cttaatagttaagggatcaaactgagaaaataaaataagttaaggaa 436  Q
    ||||||||||||||| ||||| ||| |||| |||||||| ||||||||||||  || ||| |||||||| |||| ||| ||   |||||||||||||| |    
T  35944020 gagatgaccaaaatagtaaactgcataagatttatgggaccaaattgagacatttttataattaagggaccaaaatgaaaaccaaaaataagttaaggga 35943921  T
Q  437 ccggaggatgtattaagc 454  Q
    ||  | ||||||||||||    
T  35943920 ccaaacgatgtattaagc 35943903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 43277928 - 43278021
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||||||| ||||||||| |||| ||| |||| |||||||||||| || ||||||| |||| |||| | | || | ||||||||||||||    
T  43277928 atgaccaaaatagtaaacggcataagatttacgggaccaaattgagacattttatagttaggggaccaaattaaaaataaaaaataagttaagg 43278021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 117160 - 117064
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||| |||||||| |||||||| ||||||| ||||||||||||||||| ||| || ||| ||| |||| |||| ||| ||   ||||||||||||||    
T  117160 gagaggaccaaaacaataaacgacagaagatttatgggatcaaattgaaacattttataattaggggaccaaaatgaaaaccaaaaataagttaagg 117064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 4534106 - 4534030
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||| |||||| |||| ||| |||||||||||| ||||||||||||||| || |  |||||||||||||    
T  4534106 caaattgaaacatttaatatttaaaggaccaaactgagaaattaaaataagttaagggactgagggatgtattaagc 4534030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 410
Target Start/End: Complemental strand, 7486189 - 7486117
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||| |||||||||| ||||| ||| |||| |||||||| ||||||||  ||||| |||||||||||||||||    
T  7486189 gagaggaccaaaatagtaaacagcaaaagatttatgggaccaaattgaagcactttatagttaagggatcaaa 7486117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 434
Target Start/End: Complemental strand, 16346171 - 16346115
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||| ||  ||||||||||||||| |||||||||||| |||||||||||||||    
T  16346171 caaattgaaacgtttaatagttaagggaccaaactgagaaattaaaataagttaagg 16346115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 16363816 - 16363912
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||| |||||||||| ||||| ||||| || ||||||||||||||||||| |||| |||||||  ||| |||| ||| ||   ||||||||||||||    
T  16363816 gagaggaccaaaatagtaaacagcagacgatttatgggatcaaattgagatactttatagttagaggaccaaagtgaaaaccaaaaataagttaagg 16363912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 454
Target Start/End: Original strand, 31872852 - 31872924
Alignment:
Q  382 ttgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||  ||||| |||||||||||||||||| ||||||||||||| | |||||  ||||||||||||    
T  31872852 ttgagacattttttagttgagggatcaaactgagaaattaaaataagttaaaggaccgggagatgtattaagc 31872924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 41867920 - 41868036
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| ||| ||||||| |||||||| || | |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   ||||||| |||||| ||    
T  41867920 gagaggactaaaataaaaaacggcataaaatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaactaaaaataaattaagggac 41868019  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  41868020 caaatgatgtattaagc 41868036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 436
Target Start/End: Original strand, 7770905 - 7770999
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaa 436  Q
    ||||||||||| |||| ||||| |||||||||| || |||||||| |||||| |||||||   ||||||| ||| || | ||||||||||||||||    
T  7770905 atgaccaaaatgataa-cggcataagagttatgagaccaaattgaaacactttatagttagatgatcaaaatgaaaataaaaaataagttaaggaa 7770999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 436
Target Start/End: Original strand, 7816096 - 7816190
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaa 436  Q
    ||||||||||| |||| |||||||||| ||||| || ||||||||||||||| |||||||   ||||||| | | || | ||||||||||||||||    
T  7816096 atgaccaaaatgataa-cggcagaagaattatgagaccaaattgagacactttatagttagatgatcaaaataaaaataaaaaataagttaaggaa 7816190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 454
Target Start/End: Original strand, 35945446 - 35945557
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||| ||||| ||||||||  ||||||| |||| ||||||| || ||||||||||||  ||| ||| || | |||||||||||||| |||  |     
T  35945446 gaccaaaatagtaaactgcagaagatatatgggaccaaagtgagacattttatagttaagggactaaaatgaaaacaaaaaataagttaagggaccaaat 35945545  T
Q  443 gatgtattaagc 454  Q
     |||||||||||    
T  35945546 aatgtattaagc 35945557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 454
Target Start/End: Complemental strand, 38589931 - 38589817
Alignment:
Q  339 agatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaacc 438  Q
    |||||| ||||||| |||||| || |||| |||||||| ||||||||| ||||| |||||||  ||| |||| ||| || | |||||||||||||| |||    
T  38589931 agatgatcaaaatagtaaacgacataagatttatgggaccaaattgagccactttatagttagaggaccaaattgaaaaca-aaaataagttaagggacc 38589833  T
Q  439 ggaggatgtattaagc 454  Q
      | ||||||||||||    
T  38589832 aaatgatgtattaagc 38589817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 7770808 - 7770862
Alignment:
Q  280 tatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataa 334  Q
    |||||||||||||||| ||||| | ||| |||||||||||| |||||||||||||    
T  7770808 tatcaaatggttaaaattaaaaaacttagtaaggtctatggaggaccacctataa 7770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 7796718 - 7796772
Alignment:
Q  280 tatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataa 334  Q
    |||||||||||||||| ||||| | ||| |||||||||||| |||||||||||||    
T  7796718 tatcaaatggttaaaattaaaaaacttagtaaggtctatggaggaccacctataa 7796772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 7815999 - 7816053
Alignment:
Q  280 tatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataa 334  Q
    |||||||||||||||| ||||| | ||| |||||||||||| |||||||||||||    
T  7815999 tatcaaatggttaaaattaaaaaacttagtaaggtctatggaggaccacctataa 7816053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 34617105 - 34617155
Alignment:
Q  280 tatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacct 330  Q
    |||||||||||||||| ||||| ||||| ||||||||| ||||||||||||    
T  34617105 tatcaaatggttaaaattaaaaaatttagtaaggtctacggtggaccacct 34617155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 37324599 - 37324653
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||| || ||| |||||||||||||||||| | ||||||||||||||||||||    
T  37324599 atcaaacggctaagaataaaagatttaataagatttatggtggaccacctataaa 37324653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 20308801 - 20308756
Alignment:
Q  290 ttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||||||||||||||||||| |||| | |||||||    
T  20308801 ttaaaaataaaagatttaataaggtctatggcggactatctataaa 20308756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 21095434 - 21095389
Alignment:
Q  290 ttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||||||||||||||||||| |||| | |||||||    
T  21095434 ttaaaaataaaagatttaataaggtctatggcggactatctataaa 21095389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 39515308 - 39515215
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    ||||||||||   |||| |||| |||||||||| || ||||||||||||||| ||||| | ||||||||| ||| ||   ||||||||||||||    
T  39515308 atgaccaaaaaggtaaatggcaaaagagttatgagaccaaattgagacactttatagtcaggggatcaaaatgaaaaccaaaaataagttaagg 39515215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 337
Target Start/End: Complemental strand, 21962028 - 21961972
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaaca 337  Q
    ||||||||||||||| ||||| ||||| |||||  ||||||||||||||| ||||||    
T  21962028 atcaaatggttaaaattaaaaaatttagtaaggcatatggtggaccacctttaaaca 21961972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 433
Target Start/End: Complemental strand, 31871511 - 31871409
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacact---taatagttaagggatcaaactgagaaaataaaataagtt 430  Q
    |||||| | ||||||||||||||||| ||||||| | |||||| |||||| | | |||   ||||| ||||||||  ||| ||||||| |||||||||||    
T  31871511 aacagaaaggaccaaaataataaacgacagaagattcatgggaccaaattaaaatacttagtaatatttaagggactaaattgagaaattaaaataagtt 31871412  T
Q  431 aag 433  Q
    |||    
T  31871411 aag 31871409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 36756176 - 36756060
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||||| |||||| || |||| ||||| || || ||||| |||||| ||||||| |||| |||| | | ||   |||||||||||||| ||    
T  36756176 gagatgaccaaaatagtaaacgacataagatttatgtgaccagattgaaacactttatagttatgggaccaaattaaaaactaaaaataagttaagggac 36756077  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  36756076 caaatgatgtattaagc 36756060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 6397990 - 6397943
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccac 328  Q
    ||||||||||| ||| ||||| | ||||||||||||||||||||||||    
T  6397990 atcaaatggtttaaattaaaaaaattaataaggtctatggtggaccac 6397943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 13513625 - 13513578
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccac 328  Q
    ||||||||||||||| ||||| | |||||||||| |||||||||||||    
T  13513625 atcaaatggttaaaattaaaaaaattaataaggtatatggtggaccac 13513578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 13603158 - 13603111
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccac 328  Q
    ||||||||||||||| ||||| | |||||||||| |||||||||||||    
T  13603158 atcaaatggttaaaattaaaaaaattaataaggtatatggtggaccac 13603111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 183
Target Start/End: Complemental strand, 44606485 - 44606450
Alignment:
Q  148 atgatgaataaagatgagagttttatttggagatga 183  Q
    |||||||||||||||||||||||||||||| |||||    
T  44606485 atgatgaataaagatgagagttttatttggggatga 44606450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 10052309 - 10052255
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||| |||||||| | ||| |||||||||||| ||||||||||||||| ||||    
T  10052309 atcaaagggttaaaacttaaaaatttaataaggtttatggtggaccacctttaaa 10052255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 327
Target Start/End: Original strand, 30674010 - 30674052
Alignment:
Q  285 aatggttaaaaataaaagatttaataaggtctatggtggacca 327  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||    
T  30674010 aatggttaaaattaaaagaattaataaggtctatagtggacca 30674052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 327
Target Start/End: Complemental strand, 31871593 - 31871547
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggacca 327  Q
    |||||| ||||||||||||||||||| ||||||| |||| |||||||    
T  31871593 atcaaacggttaaaaataaaagattttataaggtttatgatggacca 31871547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 327
Target Start/End: Complemental strand, 32552503 - 32552457
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggacca 327  Q
    |||||| |||||||| ||||||| |||||||||| ||||||||||||    
T  32552503 atcaaacggttaaaattaaaagaattaataaggtttatggtggacca 32552457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 36070483 - 36070397
Alignment:
Q  186 tagggaagatgatggaggaaaaaattaag-ggttgttattcattataagttacaatagatttctccttgatccaacggtctttattt 271  Q
    ||||||||| ||||||||||||||||| | | ||||  ||||||||||| ||||||||||| |||| | ||  |||||||| |||||    
T  36070483 tagggaagaagatggaggaaaaaattaggtgtttgtggttcattataagctacaatagattcctccataatttaacggtctctattt 36070397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 37276154 - 37276208
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||| ||||| |||||||| ||||||| ||| ||||||| ||||    
T  37276154 atcaaatggttaaaattaaaaaatttaatatggtctatagtgaaccacctttaaa 37276208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 37472607 - 37472554
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||||||   ||||||||||||||||| ||||||||| ||||||    
T  37472607 atcaaatggttaaaaatatgtgatttaataaggtctat-gtggaccacatataaa 37472554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 327
Target Start/End: Complemental strand, 39173323 - 39173277
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggacca 327  Q
    |||||| |||||||| ||||||| |||||||||| ||||||||||||    
T  39173323 atcaaacggttaaaattaaaagaattaataaggtttatggtggacca 39173277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 39515405 - 39515351
Alignment:
Q  280 tatcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataa 334  Q
    |||||||||||||||| || || | ||| ||||||||||| ||||||||||||||    
T  39515405 tatcaaatggttaaaattataaaacttagtaaggtctatgatggaccacctataa 39515351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 98
Target Start/End: Complemental strand, 10052569 - 10052540
Alignment:
Q  69 aagaatgttaaggaaaatgaaaggaagatg 98  Q
    ||||||||||||||||||||||||||||||    
T  10052569 aagaatgttaaggaaaatgaaaggaagatg 10052540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 14820294 - 14820233
Alignment:
Q  349 aataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    ||||||||||| || |||| ||||||||  |||||||||||||| ||||||| |||| ||||    
T  14820294 aataataaacgacataagatttatgggactaaattgagacactttatagttaggggaccaaa 14820233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 37472510 - 37472453
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    |||||||||  |||||| || |||| |||||||| ||||||||||||||| |||||||    
T  37472510 gaccaaaatggtaaacgacaaaagacttatgggaccaaattgagacactttatagtta 37472453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 452
Target Start/End: Complemental strand, 4807472 - 4807364
Alignment:
Q  344 accaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggagg 443  Q
    ||||||||||||||||||  |||| |||||||| |||||||| | || | ||||||| |||| |||| | | ||   |||||||||||| | |||| | |    
T  4807472 accaaaataataaacggcgtaagatttatgggaccaaattgaaaaacgttatagttaggggaccaaattaaaaatcaaaaataagttaaaggaccgaatg 4807373  T
Q  444 atgtattaa 452  Q
    |||||||||    
T  4807372 atgtattaa 4807364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 13366755 - 13366787
Alignment:
Q  71 gaatgttaaggaaaatgaaaggaagatgatgat 103  Q
    |||||||||||||||||||| ||||||||||||    
T  13366755 gaatgttaaggaaaatgaaatgaagatgatgat 13366787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #94
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 44606243 - 44606179
Alignment:
Q  346 caaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    ||||||||||||| | |||||| |||||||| |||||||| |||||  ||||||| |||| ||||    
T  44606243 caaaataataaacagaagaagatttatgggaccaaattgaaacactatatagttaggggaccaaa 44606179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 45194595 - 45194499
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    ||||||| ||||||| ||||||||| |||| ||||   |  ||||| | ||||||||||||||| ||| |||||| | ||| |||||||| ||||||    
T  45194595 gagatgatcaaaatagtaaacggcaaaagatttataacactaaattaaaacacttaatagttaaaggaccaaactaaaaaattaaaataaattaagg 45194499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 6e-35; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 335 - 454
Target Start/End: Complemental strand, 4167566 - 4167447
Alignment:
Q  335 acagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    ||||| ||||| |||| | |||||| ||||||| |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  4167566 acagaaatgactaaaacagtaaacgacagaagacttataggatcaaattgacacacttaatagttaagggattaaactgagaaaataaaataagttaagg 4167467  T
Q  435 aaccggaggatgtattaagc 454  Q
     | |||||||||||||||||    
T  4167466 gatcggaggatgtattaagc 4167447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 334 - 454
Target Start/End: Original strand, 10257388 - 10257506
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||| ||||| |||||| |||||| ||  |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10257388 aacagaaatgactaaaatagtaaacgaca--agagttatgggaccaaattgagacacttaatagttaagggatcaaattgagaaaataaaataagttaag 10257485  T
Q  434 gaaccggaggatgtattaagc 454  Q
    | || |  |||||||||||||    
T  10257486 ggacagtgggatgtattaagc 10257506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 334 - 454
Target Start/End: Original strand, 35315222 - 35315342
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||| ||| |||| | |||||| ||||||| |||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||||||||||    
T  35315222 aacagagaggactaaaacagtaaacgacagaagacttatgggaccaaattgacatacttaataattaagggatcaaactgagaaaataaaataagttaag 35315321  T
Q  434 gaaccggaggatgtattaagc 454  Q
    | ||||  | |||||||||||    
T  35315322 ggaccgacgaatgtattaagc 35315342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 354 - 454
Target Start/End: Original strand, 132019 - 132119
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 453  Q
    |||||||  ||||| |||||||| ||||| || ||||||||||||||||||| |||||||||||||||||||||||||||| |||  |||||||||||||    
T  132019 taaacggaggaagacttatgggaccaaatcgacacacttaatagttaagggaccaaactgagaaaataaaataagttaagggacctaaggatgtattaag 132118  T
Q  454 c 454  Q
    |    
T  132119 c 132119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 341 - 432
Target Start/End: Complemental strand, 10256232 - 10256141
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    |||||||||||| ||||||  |||||||||||| || ||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10256232 atgaccaaaatactaaacgatagaagagttatgagaccattttgagacacttaatagttaagggaccaaactgagaaaataaaataagttaa 10256141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 46457187 - 46457066
Alignment:
Q  333 aaacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    ||||||| |||||||||||  |||| || |||||| |||||||| ||||||||||||||| ||||||||||||||||| ||| ||   ||||||||||||    
T  46457187 aaacagacatgaccaaaatggtaaatggaagaagatttatgggaccaaattgagacactttatagttaagggatcaaattgaaaaccaaaaataagttaa 46457088  T
Q  433 ggaaccggaggatgtattaagc 454  Q
    ||||||  | ||||||||||||    
T  46457087 ggaaccaaacgatgtattaagc 46457066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 452
Target Start/End: Original strand, 25154935 - 25155054
Alignment:
Q  333 aaacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    |||| |||||||||||||| |||||| | |||||| ||||| ||| |||||||||||||| ||||||||||||||||| ||| ||   ||||||||||||    
T  25154935 aaacggagatgaccaaaatgataaacagaagaagatttatgagattaaattgagacactttatagttaagggatcaaattgaaaaccaaaaataagttaa 25155034  T
Q  433 ggaaccggaggatgtattaa 452  Q
    || |||  | ||||||||||    
T  25155035 gggaccaaatgatgtattaa 25155054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 454
Target Start/End: Original strand, 27899223 - 27899334
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||| |||||| || |||| ||||||||||||||||||| | || |||||||| ||| |||||| ||||||||||||||||||||| || |  |    
T  27899223 gaccaaaatagtaaacgacaaaagatttatgggatcaaattgagatattttatagttaaaggaccaaactaagaaaataaaataagttaagggactgagg 27899322  T
Q  443 gatgtattaagc 454  Q
     |||||||||||    
T  27899323 aatgtattaagc 27899334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 4168871 - 4168949
Alignment:
Q  356 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    ||||||| |||| || || || |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  4168871 aacggcaaaagacttgtgagaccaaattgacacactttatagttaagggatcaaactgagaaaataaaataagttaagg 4168949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 35483646 - 35483569
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaa-taaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| |||||| |||||||||||| |||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  35483646 caaattgaaacactttatagttaagggaccaaactgaaaaaaataaaataagttaagaaaccggaggatgtattaagc 35483569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 338 - 410
Target Start/End: Complemental strand, 26406237 - 26406165
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    ||||||||||||||  |||||||||||||||||||| |||||||||||||||||| || |||| |||||||||    
T  26406237 gagatgaccaaaatgttaaacggcagaagagttatgagatcaaattgagacactttatcgttatgggatcaaa 26406165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 43006497 - 43006381
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||||||||||||||  |||||||| |||| ||| |||| ||||||||||||||||||||||| |||| |||| ||| ||   |||||||||||||| ||    
T  43006497 gagatgaccaaaatagcaaacggcataagacttaggggaccaaattgagacacttaatagttaggggaccaaattgaaaaccaaaaataagttaagggac 43006398  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  43006397 caaatgatgtattaagc 43006381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 46674938 - 46675034
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||| |||||||||| ||||||||| |||| |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||   ||||||||||||||    
T  46674938 gagaggaccaaaatagtaaacggcaaaagatttatgggaccaaatcgagacactttatagttaagggatcaaattgaaaaccaaaaataagttaagg 46675034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 454
Target Start/End: Original strand, 13287003 - 13287114
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||| ||||| ||| ||||  || |||| |||||||| ||||||||||||||||||||||||  |||||| ||||||||  ||||| | ||| |    
T  13287003 gaccaaaatagtaaacagcataagacataagggaccaaattgaaacacttaatagttaagggatcaaatagagaaattaaaataaactaagggatcgggg 13287102  T
Q  443 gatgtattaagc 454  Q
    ||||||||||||    
T  13287103 gatgtattaagc 13287114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 454
Target Start/End: Complemental strand, 19278460 - 19278349
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||| ||| |||||||| |||| ||| |    |||||||||||||| |||  |     
T  19278460 gaccaaaatagtaaacggcagaagaattatgggaccaaattgagacactttataattaagggaccaaaatgaaatccaaaaataagttaagggaccaaat 19278361  T
Q  443 gatgtattaagc 454  Q
    ||||||||||||    
T  19278360 gatgtattaagc 19278349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 24873604 - 24873695
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    |||||||||||  |||||||||||||| |||||||| ||||||||||||||| ||||||| || |||||| ||| || | ||||||||||||    
T  24873604 atgaccaaaatggtaaacggcagaagacttatgggaccaaattgagacactttatagttagggcatcaaaatgaaaacaaaaaataagttaa 24873695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 452
Target Start/End: Original strand, 35484335 - 35484428
Alignment:
Q  359 ggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 452  Q
    ||||||||||||||||||  ||||||| | |||| |||||||| ||| ||||||||| |||||||||||||||||| ||| |  ||||||||||    
T  35484335 ggcagaagagttatgggactaaattgaaatactttatagttaaaggaccaaactgaggaaataaaataagttaagggacctggagatgtattaa 35484428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 40881163 - 40881087
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||  ||||||||||||||| || ||||||||| ||||||||||||||| ||||| |||||||||||||    
T  40881163 caaattgaaacggttaatagttaagggaccacactgagaaattaaaataagttaagggaccgggggatgtattaagc 40881087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 47537084 - 47537160
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||| ||||||||||||||| |||||||||||  ||||||||||||||| ||||| |||| ||||||||    
T  47537084 caaattgaaacatttaatagttaagggaccaaactgagaagttaaaataagttaagggaccgggggatatattaagc 47537160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 391 - 454
Target Start/End: Complemental strand, 29344223 - 29344160
Alignment:
Q  391 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| |||||  ||||||||||||    
T  29344223 ttaatagttaaggggtcaaactgagaaattaaaataagttaagggaccgggagatgtattaagc 29344160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 10256320 - 10256274
Alignment:
Q  289 gttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  10256320 gttaaaaataaaagatttaataaggtctatggtggactacctataaa 10256274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 29409286 - 29409336
Alignment:
Q  382 ttgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||    
T  29409286 ttgagacattttatagttaagggatcaaactgagaaaataaaataagttaa 29409336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 410
Target Start/End: Original strand, 46458712 - 46458789
Alignment:
Q  333 aaacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||| |||| |||||||||  ||||||| |||||| |||||||| ||||||||||||||| |||||||||||| ||||    
T  46458712 aaacggagaggaccaaaatggtaaacggaagaagatttatgggaccaaattgagacactttatagttaagggaccaaa 46458789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 354 - 454
Target Start/End: Complemental strand, 25153754 - 25153654
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 453  Q
    ||||||| |||||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  | |||||||||||    
T  25153754 taaacggaagaagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatcgaaaataagttaagggaccaaatgatgtattaag 25153655  T
Q  454 c 454  Q
    |    
T  25153654 c 25153654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 334 - 434
Target Start/End: Complemental strand, 43930435 - 43930335
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||||| |||||||||| |||||| ||||||| |||| ||| |||||||||||  |||||||||| |||| |||| ||| ||   |||||||||||||    
T  43930435 aacagagaggaccaaaatagtaaacgacagaagatttataggaccaaattgagacgtttaatagttaggggaccaaagtgaaaatcaaaaataagttaag 43930336  T
Q  434 g 434  Q
    |    
T  43930335 g 43930335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 47927451 - 47927375
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||| || ||| |||||||||||||||  ||||||||||| ||||||||||||||  ||||||| |||||||||||    
T  47927451 caaatcgaaacatttaatagttaagggactaaactgagaaattaaaataagttaagagaccggagcatgtattaagc 47927375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 454
Target Start/End: Original strand, 4858357 - 4858464
Alignment:
Q  347 aaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatg 446  Q
    |||||| |||||  ||||||| |||||||| |||||||||||| || ||||||| ||||||||| ||| ||   |||||||||||||| |||  | ||||    
T  4858357 aaaatagtaaacaacagaagatttatgggaccaaattgagacattttatagttaggggatcaaagtgaaaactaaaaataagttaagggaccaaatgatg 4858456  T
Q  447 tattaagc 454  Q
    ||||||||    
T  4858457 tattaagc 4858464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 343 - 453
Target Start/End: Original strand, 19279621 - 19279731
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||| |||||| || || | |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  |     
T  19279621 gaccaaaatagtaaacgacaaaaaatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaac 19279720  T
Q  443 gatgtattaag 453  Q
    |||||||||||    
T  19279721 gatgtattaag 19279731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 432
Target Start/End: Original strand, 22746332 - 22746418
Alignment:
Q  346 caaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    ||||||| ||||||||| |||| |||||||| ||||||||||||||| ||||||| ||||  ||| ||| || | ||||||||||||    
T  22746332 caaaatagtaaacggcacaagatttatgggaccaaattgagacactttatagttaggggactaaattgaaaacaaaaaataagttaa 22746418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 25154847 - 25154901
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||| ||||||    
T  25154847 atcaaacggttaaaaataaaagatttaataagttttatggtggaccacttataaa 25154901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 391
Target Start/End: Original strand, 13446662 - 13446715
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacact 391  Q
    |||| |||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  13446662 gagaggaccaatataataaacggcagaagatttatgggaccaaattgagacact 13446715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 439
Target Start/End: Original strand, 33071678 - 33071743
Alignment:
Q  374 ggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccg 439  Q
    |||||||||||| ||| ||||||||||||| |  ||||||||||| ||||||||||||||| ||||    
T  33071678 ggatcaaattgaaacatttaatagttaaggaactaaactgagaaattaaaataagttaagggaccg 33071743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 454
Target Start/End: Complemental strand, 34557506 - 34557393
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccgg 440  Q
    |||||||||| ||||||||||| ||||  || |||| ||||||||||||||| ||||||| |||| |||| | | |    ||||||||||||||||||      
T  34557506 atgaccaaaagaataaacggcaaaagacataagggaccaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaaggaaccaa 34557407  T
Q  441 aggatgtattaagc 454  Q
    || |||||||||||    
T  34557406 agcatgtattaagc 34557393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 454
Target Start/End: Complemental strand, 36702886 - 36702773
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccgg 440  Q
    |||| ||||||| |||||||||||| | |||||||| |||||||||||| || | |||||||||| |||| ||| |    |||||||||||||| |||      
T  36702886 atgatcaaaatagtaaacggcagaatatttatgggaccaaattgagacagtttaaagttaagggaccaaaatgaaatctaaaaataagttaagggaccaa 36702787  T
Q  441 aggatgtattaagc 454  Q
    || |||||||||||    
T  36702786 agcatgtattaagc 36702773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 453
Target Start/End: Original strand, 18802424 - 18802508
Alignment:
Q  369 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 453  Q
    ||||||||  |||||||||||||| ||||||| ||||||||| ||| || | |||||||||||||| |||  | |||||||||||    
T  18802424 ttatgggactaaattgagacactttatagttaggggatcaaaatgaaaacaaaaaataagttaagggaccaaatgatgtattaag 18802508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 22061799 - 22061895
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||| ||| |||||| ||||||||| |||| |||||||| |||||||||||  || ||||||| |||| |||| ||| || | ||||||||||||||    
T  22061799 gagaagactaaaatagtaaacggcataagatttatgggaccaaattgagacgttttatagttaggggaccaaattgaaaacacaaaataagttaagg 22061895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 22744858 - 22744742
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| ||||||||| |||| |||| ||| |||||||| |||||| ||||||| ||||  ||| ||| ||   |||||||||||||| ||    
T  22744858 gagaagaccaaaatagtaaacggcataagatttataggaccaaattgaaacactttatagttaggggactaaattgaaaatcaaaaataagttaagggac 22744759  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  22744758 caaatgatgtattaagc 22744742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 37782029 - 37781953
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||| ||||||||||| | | |||||||||||| |||||||| |||||| ||||  |||||||||||||    
T  37782029 caaattgaaacatttaatagttaaagaaccaaactgagaaattaaaataatttaagggaccgagggatgtattaagc 37781953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 433
Target Start/End: Complemental strand, 22060575 - 22060480
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    ||||||||||||||| ||||||||| |||| || ||| | ||||||||||||||| |||||||  ||| |||| | | || | |||||||||||||    
T  22060575 gagatgaccaaaatagtaaacggcataagacttgtggaaccaaattgagacactttatagttagaggaccaaattaaaaacacaaaataagttaag 22060480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 432
Target Start/End: Complemental strand, 29408302 - 29408264
Alignment:
Q  394 atagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  29408302 atagttaagggatcaaactgagaaaataaaataaattaa 29408264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 45719721 - 45719651
Alignment:
Q  344 accaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactga 414  Q
    ||||||||  |||||  ||||||||||||| || |||||| |||||||| ||||||| |||||||||||||    
T  45719721 accaaaatggtaaacaacagaagagttatgagaccaaatttagacactttatagttaggggatcaaactga 45719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 369 - 434
Target Start/End: Complemental strand, 27897773 - 27897708
Alignment:
Q  369 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||| |||||||| ||| || ||| |||||| |||||| | |||||||||||||||||||||    
T  27897773 ttatgggaccaaattgaaacattttataattaaggaatcaaattaagaaaataaaataagttaagg 27897708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 400
Target Start/End: Complemental strand, 35127921 - 35127860
Alignment:
Q  339 agatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    |||||||||||||| ||||||||| |||| ||||||||  ||||||||||| || |||||||    
T  35127921 agatgaccaaaatagtaaacggcataagatttatgggacaaaattgagacattttatagtta 35127860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 43935288 - 43935235
Alignment:
Q  347 aaaataataaacggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    |||||| |||||||||||||| ||||| || ||||||||||||||| |||||||    
T  43935288 aaaatagtaaacggcagaagatttatgagaccaaattgagacactttatagtta 43935235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 12631879 - 12631953
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||||||||| |||||||||| | | |||||| ||||||||||||||||||| ||| |  ||||||||||||    
T  12631879 caaattgagacactttatagttaagg-acccaactga-aaaataaaataagttaagggacctggagatgtattaagc 12631953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 46458526 - 46458602
Alignment:
Q  186 tagggaagatgatggaggaaaaaattaag-ggttgttattcattataagttacaatagatttctccttgatccaacg 261  Q
    ||||||||| ||||||||||||||||| | | ||||  ||||||||||| |||||||||| ||| | ||||||||||    
T  46458526 tagggaagaagatggaggaaaaaattaggtgtttgtggttcattataaggtacaatagatctcttcatgatccaacg 46458602  T

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Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 47928474 - 47928550
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||| |||||||||||| ||  ||||| ||||| ||||||||||||||| || |  |||||||||||||    
T  47928474 caaattgaaacatttaatagttaagagactaaactaagaaattaaaataagttaagggacggagggatgtattaagc 47928550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 328
Target Start/End: Original strand, 10957067 - 10957110
Alignment:
Q  285 aatggttaaaaataaaagatttaataaggtctatggtggaccac 328  Q
    ||||||||||| ||||||| |||||||| |||||||||||||||    
T  10957067 aatggttaaaattaaaagaattaataagatctatggtggaccac 10957110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 434
Target Start/End: Original strand, 17288249 - 17288320
Alignment:
Q  363 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    ||||| |||||||| ||||||||||||||| ||||||| |||| |||| | | || | ||||||||||||||    
T  17288249 gaagacttatgggaccaaattgagacactttatagttaggggaccaaaattaaaacaaaaaataagttaagg 17288320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 433
Target Start/End: Original strand, 41516344 - 41516443
Alignment:
Q  334 aacagagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 433  Q
    |||||| ||||||| | || ||||||| |||| | |||||||| |||||| |||||||| ||||||| |||| |||| | | || | |||||||||||||    
T  41516344 aacagaaatgaccacattactaaacggaagaatacttatgggaccaaattaagacactttatagttaggggaccaaaattaaaacaaaaaataagttaag 41516443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 321
Target Start/End: Original strand, 131816 - 131950
Alignment:
Q  188 gggaagatgatggaggaaaaaattaag-ggttgttattcattataagttacaatagatttctccttgatccaacggtctttatttnnnnnnnntatcaaa 286  Q
    ||||||| |||| || ||||||||| | ||||||  ||||||||||| |||||||||| ||||| |||||||||  |||| ||||         ||||||    
T  131816 gggaagaagatgaagaaaaaaattaggtggttgtggttcattataagctacaatagatctctccatgatccaacaatcttcatttaaagaaaagatcaaa 131915  T
Q  287 tggttaaaaataaaagatttaataaggtctatggt 321  Q
     |||||||| ||||| ||||||||| || ||||||    
T  131916 cggttaaaattaaaaaatttaataaagtttatggt 131950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 432
Target Start/End: Original strand, 29345122 - 29345176
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    |||||| | ||| |||||||||||||||||||||||| ||| |||||||| ||||    
T  29345122 caaattaaaacatttaatagttaagggatcaaactgaaaaattaaaataaattaa 29345176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 389
Target Start/End: Original strand, 36702959 - 36703005
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagaca 389  Q
    |||||||||| |||||||||||| | |||||||| ||||||||||||    
T  36702959 gaccaaaatagtaaacggcagaatatttatgggaccaaattgagaca 36703005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 46458624 - 46458678
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||| |||||||| ||   |||||||||||||||||||||||| |||||||||    
T  46458624 atcaaacggttaaaactatgtgatttaataaggtctatggtggactacctataaa 46458678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 48671179 - 48671118
Alignment:
Q  348 aaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    ||||| ||||||||| |||| |||||| |||||||||||| |||| ||||||||| |||||||    
T  48671179 aaatagtaaacggcataagatttatgg-atcaaattgagatactttatagttaagagatcaaa 48671118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 337
Target Start/End: Original strand, 14109005 - 14109038
Alignment:
Q  304 tttaataaggtctatggtggaccacctataaaca 337  Q
    ||||||||||||||||||||||||||| ||||||    
T  14109005 tttaataaggtctatggtggaccacctttaaaca 14109038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 337
Target Start/End: Original strand, 14418962 - 14418995
Alignment:
Q  304 tttaataaggtctatggtggaccacctataaaca 337  Q
    ||||||||||||||||||||||||||| ||||||    
T  14418962 tttaataaggtctatggtggaccacctttaaaca 14418995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 454
Target Start/End: Complemental strand, 18801296 - 18801211
Alignment:
Q  369 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||||||||||||||| ||||||| |||| |||| ||| |    |||||||||||||| |||  || |||||||||||    
T  18801296 ttatgggaccaaattgagacactttatagttaggggaccaaaatgaaattcaaaaataagttaagggaccaaagcatgtattaagc 18801211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 410
Target Start/End: Original strand, 19848869 - 19848910
Alignment:
Q  369 ttatgggatcaaattgagacacttaatagttaagggatcaaa 410  Q
    |||||||| ||||||||||||||| |||||||||||| ||||    
T  19848869 ttatgggaccaaattgagacactttatagttaagggaccaaa 19848910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 43007662 - 43007715
Alignment:
Q  347 aaaataataaacggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    |||||| |||||| || |||| |||||||| ||||||||||||||| |||||||    
T  43007662 aaaatagtaaacgacataagacttatgggaccaaattgagacactttatagtta 43007715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 337
Target Start/End: Complemental strand, 4167656 - 4167600
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaaca 337  Q
    |||||| |||| ||| | ||| |||||||||| ||||||||||||||||| ||||||    
T  4167656 atcaaaaggttgaaatttaaaaatttaataagatctatggtggaccacctttaaaca 4167600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 434
Target Start/End: Complemental strand, 4857297 - 4857217
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||||||||| || ||||| ||||| |||||| || ||||||| |||| |||| ||| ||   ||||||||||||||    
T  4857297 taaacggcagaagatttgtgggaccaaatcgagacattttatagttaggggaccaaagtgaaaaccaaaaataagttaagg 4857217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 454
Target Start/End: Complemental strand, 33458405 - 33458306
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 453  Q
    ||||||| |||||| |||||||| | ||||||||||||| |||||||| ||| |||| ||| ||   |||||||||||| | |||  | |||||||||||    
T  33458405 taaacggaagaagacttatggga-ctaattgagacactttatagttaaaggaccaaaatgaaaaccaaaaataagttaaaggaccaaatgatgtattaag 33458307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 434
Target Start/End: Original strand, 40926539 - 40926619
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    ||||||| |||| | |||| ||| ||||||||||||||| ||||||| |||| |||| ||| ||   ||||||||||||||    
T  40926539 taaacggtagaaaatttataggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagg 40926619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 437
Target Start/End: Original strand, 45721801 - 45721869
Alignment:
Q  369 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||||| | ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||||||    
T  45721801 ttatggaaccaaattgagacactttatagttaggggaccaaaatgaaaactaaaaataagttaaggaac 45721869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 9e-31; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 14328778 - 14328893
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| |||||| || |||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14328778 gagaggaccaaaatagtaaacgacaaaagaattatgagaccaaattaagacacttaatagttaagggatcaaactgagaaaataaaataagttaagggac 14328877  T
Q  438 cggaggatgtattaagc 454  Q
     || |||||||||||||    
T  14328878 tgg-ggatgtattaagc 14328893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 14421788 - 14421903
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| |||||| || |||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14421788 gagaggaccaaaatagtaaacgacaaaagaattatgagaccaaattaagacacttaatagttaagggatcaaactgagaaaataaaataagttaagggac 14421887  T
Q  438 cggaggatgtattaagc 454  Q
     || |||||||||||||    
T  14421888 tgg-ggatgtattaagc 14421903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 343 - 453
Target Start/End: Complemental strand, 14326260 - 14326150
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    ||||| |||| ||||||  |||||| |||||||| ||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| | ||| |    
T  14326260 gaccacaatagtaaacgatagaagaattatgggaccaaattgagacgctcaataattaagggatcaaactgagaaaataaaataagttaagggatcgggg 14326161  T
Q  443 gatgtattaag 453  Q
    |||||||||||    
T  14326160 gatgtattaag 14326150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 343 - 453
Target Start/End: Complemental strand, 14419270 - 14419160
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    ||||| |||| ||||||  |||||| |||||||| ||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| | ||| |    
T  14419270 gaccacaatagtaaacgatagaagaattatgggaccaaattgagacgctcaataattaagggatcaaactgagaaaataaaataagttaagggatcgggg 14419171  T
Q  443 gatgtattaag 453  Q
    |||||||||||    
T  14419170 gatgtattaag 14419160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 364 - 454
Target Start/End: Complemental strand, 13800117 - 13800027
Alignment:
Q  364 aagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||| |||||||| |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||| |||   |||||||||||||    
T  13800117 aagatttatgggaccaaattgacacaattaatagttaagggaccaaactgagaaaataaaataagttaagggacctagggatgtattaagc 13800027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 1757538 - 1757614
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||  ||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||    
T  1757538 caaattgaaacgtttaatagttaagggaccaaactgagaaattaaaataagttaagggaccggaggatgtattaagc 1757614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 22299907 - 22300003
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   ||||||||||||||    
T  22299907 gagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagg 22300003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 387 - 449
Target Start/End: Original strand, 16269821 - 16269883
Alignment:
Q  387 acacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtat 449  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||    
T  16269821 acacttaatagttaagagatcaaactgagaaaataaaataagttaagagaccggaggatgtat 16269883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 145 - 261
Target Start/End: Original strand, 14327201 - 14327316
Alignment:
Q  145 aagatgatgaataaagatgagagttttatttggagatgatttagggaagatgatggaggaaaaaattaaggg--ttgttattcattataagttacaatag 242  Q
    ||||||||||||||   ||||||||||||||||||||||||| ||||||| |||||||||||||| | |||   ||||  ||||||||||| |||| ||     
T  14327201 aagatgatgaataa---tgagagttttatttggagatgattttgggaagaagatggaggaaaaaaattaggtgtttgtggttcattataagctacagtat 14327297  T
Q  243 atttctccttgatccaacg 261  Q
    || ||||||||||||||||    
T  14327298 atctctccttgatccaacg 14327316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 145 - 261
Target Start/End: Original strand, 14420211 - 14420326
Alignment:
Q  145 aagatgatgaataaagatgagagttttatttggagatgatttagggaagatgatggaggaaaaaattaaggg--ttgttattcattataagttacaatag 242  Q
    ||||||||||||||   ||||||||||||||||||||||||| ||||||| |||||||||||||| | |||   ||||  ||||||||||| |||| ||     
T  14420211 aagatgatgaataa---tgagagttttatttggagatgattttgggaagaagatggaggaaaaaaattaggtgtttgtggttcattataagctacagtat 14420307  T
Q  243 atttctccttgatccaacg 261  Q
    || ||||||||||||||||    
T  14420308 atctctccttgatccaacg 14420326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 452
Target Start/End: Complemental strand, 27438902 - 27438788
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||| | |||||||||||| | |||||||||||||||||||||||| |||||||| ||| |||| ||| |    |||||||||||||| ||    
T  27438902 gagatgaccaaaagagtaaacggcagaatatttatgggatcaaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataagttaagggac 27438803  T
Q  438 cggaggatgtattaa 452  Q
    |  | ||||||||||    
T  27438802 caaatgatgtattaa 27438788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 343 - 432
Target Start/End: Original strand, 31740281 - 31740370
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 432  Q
    |||||||||  ||||||||| |||| |||||||| ||||||||||||||| |||||||||||| |||| ||| || | ||||||||||||    
T  31740281 gaccaaaatggtaaacggcataagatttatgggaccaaattgagacactttatagttaagggaccaaattgaaaacaaaaaataagttaa 31740370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 454
Target Start/End: Original strand, 5693647 - 5693707
Alignment:
Q  394 atagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||||    
T  5693647 atagttaagggatcaaattgagaaaataaaataagttaagggatcgggggatgtattaagc 5693707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 8412320 - 8412436
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| ||||||||| |||| |||||||| ||||||||||||||| ||||||| ||||  ||| ||| || | |||||||||||||| ||    
T  8412320 gagaggaccaaaatagtaaacggcacaagatttatgggaccaaattgagacactttatagttaggggactaaattgaaaacaaaaaataagttaagggac 8412419  T
Q  438 cggaggatgtattaagc 454  Q
    |  |  |||||||||||    
T  8412420 caaataatgtattaagc 8412436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 27440179 - 27440295
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| ||||||| |||||| |||||||| |||||||||||| || | ||||||||||||||| ||| |    |||||||||||||| ||    
T  27440179 gagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacaatttaaagttaagggatcaaaatgaaattcaaaaataagttaagggac 27440278  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  27440279 caaatgatgtattaagc 27440295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 31738475 - 31738359
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||  ||||| |||||||| |||||||| |||||||| |||||| ||||||| |||| |||| ||| ||   |||||||||||||| ||    
T  31738475 gagaggaccaaaatggtaaaccgcagaagacttatgggaccaaattgaaacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggac 31738376  T
Q  438 cggaggatgtattaagc 454  Q
    |  ||||||||||||||    
T  31738375 caaaggatgtattaagc 31738359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 335
Target Start/End: Original strand, 293494 - 293605
Alignment:
Q  223 ttcattataagttacaatagatttctccttgatccaacggtctttatttnnnnnnnntatcaaatggttaaaaataaaagatttaataaggtctatggtg 322  Q
    ||||||||||| |||||||||| ||||| |||||||||| |||  ||||         ||||||||||||||||||    ||||||||||||||||||||    
T  293494 ttcattataagctacaatagatctctccatgatccaacgatctccatttaaaaaaag-atcaaatggttaaaaatatgttatttaataaggtctatggtg 293592  T
Q  323 gaccacctataaa 335  Q
    |||||||||||||    
T  293593 gaccacctataaa 293605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 9927717 - 9927602
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||||| ||||||   ||||  |||||||| ||||||||||||||| ||||||| |||| |||||| | || | |||||||||||||| ||    
T  9927717 gagatgaccaaaatagtaaacgattgaagt-ttatgggaccaaattgagacactttatagttaggggaccaaactaaaaacaaaaaataagttaagggac 9927619  T
Q  438 cggaggatgtattaagc 454  Q
    | || | ||||||||||    
T  9927618 cagatgctgtattaagc 9927602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 18139491 - 18139607
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||| ||||||||||||||||  || |||| ||| ||||||||||| |||||||  |||||||| ||| ||   |||||||||||||| ||    
T  18139491 gagaggaccaaaacaataaacggcagaagatataagggaccaatttgagacactttatagttagaggatcaaagtgaaaacggaaaataagttaagggac 18139590  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  18139591 caaatgatgtattaagc 18139607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 31738665 - 31738585
Alignment:
Q  186 tagggaagatgatggaggaaaaaattaagggtt-gttattcattataagttacaatagatttctccttgatccaacggtct 265  Q
    ||||||||| ||||||||||||||||| | ||| ||  ||||||||||| |||||||||| ||||| ||||||||||||||    
T  31738665 tagggaagaagatggaggaaaaaattaggtgtttgtggttcattataagctacaatagatctctccatgatccaacggtct 31738585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 354 - 434
Target Start/End: Complemental strand, 33807785 - 33807705
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||||||| | |||||| ||||||||||||||||| |||||||||||| |||| ||| ||   ||||||||||||||    
T  33807785 taaacggcagaaaatttatggcatcaaattgagacactttatagttaagggaccaaagtgaaaaccaaaaataagttaagg 33807705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 22298711 - 22298662
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacactt 392  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  22298711 gaccaaaattataaacggcagaatagttatgggatcaaactgagacactt 22298662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 454
Target Start/End: Original strand, 33802044 - 33802137
Alignment:
Q  361 cagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||| ||||||||||||||| |||||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  | ||||||||||||    
T  33802044 cagaagatttatgggatcaaattaagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaagc 33802137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 27107253 - 27107177
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| | | |||||||||||  ||||||||||||||| ||||||||||||||| | ||| | |||||||||||    
T  27107253 caaattgaaatatttaatagttaattgatcaaactgagaaattaaaataagttaagggatcggggaatgtattaagc 27107177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 439
Target Start/End: Original strand, 27108231 - 27108279
Alignment:
Q  391 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccg 439  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  27108231 ttaatagttaagggaccaaactgagaaattaaaataagttaagggaccg 27108279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 27149059 - 27148983
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| | | |||||||||||  ||||||||||||||| ||||||||||||||| | ||| | |||||||||||    
T  27149059 caaattgaaatatttaatagttaattgatcaaactgagaaattaaaataagttaagggatcggggaatgtattaagc 27148983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 439
Target Start/End: Original strand, 27150028 - 27150076
Alignment:
Q  391 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccg 439  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  27150028 ttaatagttaagggaccaaactgagaaattaaaataagttaagggaccg 27150076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 379 - 454
Target Start/End: Complemental strand, 1692145 - 1692070
Alignment:
Q  379 aaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||| ||| |||||||||||| || |||||||| ||| |||||||| |||||| || || |||||||||||||    
T  1692145 aaattgaaacatttaatagttaagagaccaaactgaaaaattaaaataaattaagggactgggggatgtattaagc 1692070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 454
Target Start/End: Complemental strand, 5311386 - 5311275
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||| |||||| || |||| |||| ||| ||||||||||||||| ||||||| ||||  ||| ||| ||   |||||||||||||| |||  |     
T  5311386 gaccaaaatagtaaacgacataagatttataggaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaagggaccaaat 5311287  T
Q  443 gatgtattaagc 454  Q
    ||||||||||||    
T  5311286 gatgtattaagc 5311275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 8411198 - 8411099
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| ||||||||| |||| ||||  || ||||||||||||||| ||||||| ||||  ||| ||| ||   |||||||||||||||||    
T  8411198 gagaggaccaaaatagtaaacggcataagatttataagaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaaggaac 8411099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 335
Target Start/End: Original strand, 14328704 - 14328739
Alignment:
Q  300 aagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||||||||||||||||||||||||    
T  14328704 aagatttaataaggtctatggtggaccacctataaa 14328739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 335
Target Start/End: Original strand, 14421714 - 14421749
Alignment:
Q  300 aagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||||||||||||||||||||||||    
T  14421714 aagatttaataaggtctatggtggaccacctataaa 14421749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 14327063 - 14327169
Alignment:
Q  12 agagagggagaatgagaatgtttg--tttttaggaatgattctgatagtaannnnnnnn---aagaatgttaaggaaaatgaaaggaagatgatgattat 106  Q
    ||||| |||||||||||||||||   ||||||||||||||||||||||||            |||||||||||||||||| ||| ||||||||||||| |    
T  14327063 agagaaggagaatgagaatgttttattttttaggaatgattctgatagtattttttttttttaagaatgttaaggaaaataaaatgaagatgatgattct 14327162  T
Q  107 agtagta 113  Q
    |||||||    
T  14327163 agtagta 14327169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 14420073 - 14420179
Alignment:
Q  12 agagagggagaatgagaatgtttg--tttttaggaatgattctgatagtaannnnnnnn---aagaatgttaaggaaaatgaaaggaagatgatgattat 106  Q
    ||||| |||||||||||||||||   ||||||||||||||||||||||||            |||||||||||||||||| ||| ||||||||||||| |    
T  14420073 agagaaggagaatgagaatgttttattttttaggaatgattctgatagtattttttttttttaagaatgttaaggaaaataaaatgaagatgatgattct 14420172  T
Q  107 agtagta 113  Q
    |||||||    
T  14420173 agtagta 14420179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 438
Target Start/End: Original strand, 1693038 - 1693085
Alignment:
Q  391 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaacc 438  Q
    ||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  1693038 ttaatagttaagggaccaaactgaaaaattaaaataagttaacgaacc 1693085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 24757090 - 24757040
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccaccta 331  Q
    ||||||| ||||||| ||||||| ||||||||||||| ||| |||||||||    
T  24757090 atcaaattgttaaaattaaaagaattaataaggtctaaggtagaccaccta 24757040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 354 - 434
Target Start/End: Original strand, 4238 - 4318
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||    
T  4238 taaacggcagacgagttatgagatcaaattgagacacttaataattaagggactaaactaagaaaataaaataagttaagg 4318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 4173 - 4127
Alignment:
Q  289 gttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  4173 gttaaaaataaaagatttaatacggtttatggtggaccacctataaa 4127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 632 - 748
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||||  |||||||||||||| ||||||||  |||||||||||||| ||||||| |||| |||| ||| || | |||||||||||||| ||    
T  632 gagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaataagttaagggac 731  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  732 caaatgatgtattaagc 748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 642 - 526
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||||  |||||||||||||| ||||||||  |||||||||||||| ||||||| |||| |||| ||| || | |||||||||||||| ||    
T  642 gagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaataagttaagggac 543  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  542 caaatgatgtattaagc 526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 9482 - 9598
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||||  |||||||||||||| ||||||||  |||||||||||||| ||||||| |||| |||| ||| || | |||||||||||||| ||    
T  9482 gagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaataagttaagggac 9581  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  9582 caaatgatgtattaagc 9598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 8491 - 8395
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    ||||||||| ||||| |||| | | ||||| |||||||| ||| |||||||| || ||||||| |||| |||| ||| ||   ||||||||||||||    
T  8491 gagatgaccgaaatagtaaatgactgaagatttatgggaccaatttgagacagtttatagttaggggagcaaagtgaaaaccaaaaataagttaagg 8395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 452
Target Start/End: Original strand, 48460 - 48574
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||| | |||||||||||| | |||||||||||||||||||||||| |||||||| ||| |||| ||| |    |||||||||||||| ||    
T  48460 gagatgaccaaaagagtaaacggcagaatatttatgggatcaaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataagttaagggac 48559  T
Q  438 cggaggatgtattaa 452  Q
    |  | ||||||||||    
T  48560 caaatgatgtattaa 48574  T

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Target: scaffold0003; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 47182 - 47066
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    |||| |||||||||| ||||||| |||||| |||||||| |||||||||||| || | ||||||||||||||| ||| |    |||||||||||||| ||    
T  47182 gagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacaatttaaagttaagggatcaaaatgaaattcaaaaataagttaagggac 47083  T
Q  438 cggaggatgtattaagc 454  Q
    |  | ||||||||||||    
T  47082 caaatgatgtattaagc 47066  T

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Target: scaffold0041 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 85120 - 85196
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||  ||||||||||||||| || ||||||||| ||||||||||||||| ||||| |||||||||||||    
T  85120 caaattgaaacggttaatagttaagggaccacactgagaaattaaaataagttaagggaccgggggatgtattaagc 85196  T

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Target: scaffold0013 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 454
Target Start/End: Complemental strand, 96269 - 96156
Alignment:
Q  341 atgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccgg 440  Q
    |||||||||||  ||||||| |||||| |||| ||||||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||| | |||      
T  96269 atgaccaaaatggtaaacggaagaagatttatcggatcaaattgagacactttatagttaggggaccaaattgaaaatcgaaaataagttaatggaccaa 96170  T
Q  441 aggatgtattaagc 454  Q
    | ||||||||||||    
T  96169 atgatgtattaagc 96156  T

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Target: scaffold0046 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 362 - 454
Target Start/End: Complemental strand, 23494 - 23402
Alignment:
Q  362 agaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    ||||||||||||||| |||||||||||| || ||||||| |||| |||||||| ||   |||||||||||||| |||  | ||||||||||||    
T  23494 agaagagttatgggaccaaattgagacattttatagttaggggaccaaactgaaaaccaaaaataagttaagggaccatatgatgtattaagc 23402  T

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Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 205596 - 205672
Alignment:
Q  378 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||| ||  |||||| |||||||| |||||||||||| ||||||||||||||| |||||  ||||||||||||    
T  205596 caaattgaaacgtttaataattaagggaccaaactgagaaattaaaataagttaagggaccgggagatgtattaagc 205672  T

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Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 454
Target Start/End: Complemental strand, 204593 - 204532
Alignment:
Q  392 taatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 454  Q
    |||||||||||||| ||| |||||||| ||||||||||||||| ||||| | |||||||||||    
T  204593 taatagttaagggaccaa-ctgagaaattaaaataagttaagggaccggtgtatgtattaagc 204532  T

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Target: scaffold0178 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 454
Target Start/End: Original strand, 2274 - 2385
Alignment:
Q  343 gaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggag 442  Q
    |||||||||| ||||| | ||||||||||||||| |||||||| |||||| ||| ||| |||| |||| ||| ||   |||||||||||||| |||  ||    
T  2274 gaccaaaatagtaaacagtagaagagttatgggaccaaattgaaacactttataattaggggaccaaaatgaaaaccaaaaataagttaagggaccaaag 2373  T
Q  443 gatgtattaagc 454  Q
     |||||||||||    
T  2374 catgtattaagc 2385  T

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Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 145873 - 145988
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 437  Q
    ||||||||||||||| ||||||||| |||| |||| ||| |||||| ||||| || ||||||| ||||| ||| ||| ||   ||||||| ||||| |||    
T  145873 gagatgaccaaaatagtaaacggcataagatttattggaccaaattaagacattttatagttaggggattaaattgaaaaccaaaaataaattaagaaac 145972  T
Q  438 cggaggatgtattaag 453  Q
    |  | |||||||||||    
T  145973 caaatgatgtattaag 145988  T

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Target: scaffold0084 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 13226 - 13304
Alignment:
Q  356 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    ||||| |||||||||||||||  ||||||||||| || ||||||| |||| |||||||| ||   ||||||||||||||    
T  13226 aacggaagaagagttatgggacgaaattgagacattttatagttaggggaccaaactgaaaaccaaaaataagttaagg 13304  T

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Target: scaffold0051 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 22239 - 22177
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagtta 400  Q
    ||||||||||||||| |||||| ||||||| ||||| || |||||||||||| || |||||||    
T  22239 gagatgaccaaaatagtaaacgacagaagatttatgtgaacaaattgagacattttatagtta 22177  T

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Target: scaffold0051; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 39812 - 39866
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaa 335  Q
    ||||||||||||||| ||||| |||||||| |||| |||||| ||||||| ||||    
T  39812 atcaaatggttaaaattaaaaaatttaatacggtccatggtgaaccacctttaaa 39866  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 434
Target Start/End: Original strand, 56720 - 56800
Alignment:
Q  354 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 434  Q
    |||||||||||||| |||| ||| ||||||||||||||| ||| ||| |||| |||| ||| |  | ||||||||||||||    
T  56720 taaacggcagaagatttataggaccaaattgagacactttataattaggggaccaaagtgaaatcaaaaaataagttaagg 56800  T

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Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 337
Target Start/End: Original strand, 56611 - 56667
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaaca 337  Q
    |||||| |||||||| | ||| |||||||||||||| |||||||||| || ||||||    
T  56611 atcaaaaggttaaaatttaaaaatttaataaggtctttggtggaccatctttaaaca 56667  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 337
Target Start/End: Original strand, 207709 - 207765
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccacctataaaca 337  Q
    ||||||||||||||| ||||| ||||| |||||  ||||||||||||||| ||||||    
T  207709 atcaaatggttaaaattaaaaaatttagtaaggcatatggtggaccacctttaaaca 207765  T

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Target: scaffold2127 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 405
Target Start/End: Original strand, 519 - 586
Alignment:
Q  338 gagatgaccaaaataataaacggcagaagagttatgggatcaaattgagacacttaatagttaaggga 405  Q
    |||| |||||||||| ||||||||| |||| |||||  | ||||||||||||||| ||||||| ||||    
T  519 gagaggaccaaaatagtaaacggcataagatttatgacaccaaattgagacactttatagttagggga 586  T

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Target: scaffold2071 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 589 - 636
Alignment:
Q  281 atcaaatggttaaaaataaaagatttaataaggtctatggtggaccac 328  Q
    |||||| |||| ||| ||||| ||||||||||||||||||||||||||    
T  589 atcaaacggtttaaattaaaaaatttaataaggtctatggtggaccac 636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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