View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21233_low_33 (Length: 350)
Name: NF21233_low_33
Description: NF21233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21233_low_33 |
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Alignment Details
Target: chr6 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 102 - 332
Target Start/End: Original strand, 34102653 - 34102883
Alignment:
| Q |
102 |
aagtgtttgcatccctcaccttaccaagtcctcgtacaagcaattttatcccaactcatcaagttgatccctttgtcgttagagtttgttcgtatgaaat |
201 |
Q |
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| T |
34102653 |
aagtgtttgcatccctcaccttaccaagtcctcttacaagcaattttatcccaactcatcaagttgatccctttgtcgttagagtttgtccgtatgaaat |
34102752 |
T |
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| Q |
202 |
ttcgaatggtttgatcgggtaggtcacaaatatctcgagtggttgaaccgtaattaaatcaataataattaattatttattttgtataagtagtctagtg |
301 |
Q |
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| T |
34102753 |
ttcgaatggtttgatcgggtaggtcacaaatatctcgagtggttgaaccgtaattaaatcaataataattaattatttattttgtataagtagtctagtg |
34102852 |
T |
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| Q |
302 |
gttagaaaattacctattaaggtgagtaaat |
332 |
Q |
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| T |
34102853 |
gttagaaaattacctattaaggtgaataaat |
34102883 |
T |
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