View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21233_low_53 (Length: 255)

Name: NF21233_low_53
Description: NF21233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21233_low_53
NF21233_low_53
[»] chr8 (7 HSPs)
chr8 (19-240)||(27121648-27121869)
chr8 (175-232)||(2743963-2744020)
chr8 (182-232)||(13468806-13468856)
chr8 (176-227)||(8878150-8878201)
chr8 (173-232)||(19715778-19715837)
chr8 (175-232)||(4125078-4125135)
chr8 (175-232)||(15682959-15683016)
[»] chr1 (2 HSPs)
chr1 (176-240)||(24801403-24801467)
chr1 (176-228)||(31733746-31733798)
[»] chr2 (6 HSPs)
chr2 (181-232)||(37568787-37568838)
chr2 (175-232)||(44732627-44732684)
chr2 (177-240)||(9438192-9438255)
chr2 (175-232)||(5394427-5394483)
chr2 (173-230)||(38373044-38373101)
chr2 (176-228)||(42745171-42745223)
[»] scaffold0182 (1 HSPs)
scaffold0182 (175-232)||(26361-26418)
[»] chr7 (6 HSPs)
chr7 (175-232)||(29059835-29059892)
chr7 (175-232)||(31492133-31492190)
chr7 (181-232)||(8839341-8839392)
chr7 (175-232)||(13254155-13254212)
chr7 (175-232)||(21747094-21747150)
chr7 (173-229)||(19477301-19477357)
[»] chr4 (8 HSPs)
chr4 (175-232)||(31307120-31307177)
chr4 (175-232)||(46016179-46016236)
chr4 (176-240)||(56447177-56447241)
chr4 (176-227)||(13948647-13948698)
chr4 (173-232)||(9012300-9012359)
chr4 (176-225)||(38844223-38844272)
chr4 (173-229)||(14854638-14854694)
chr4 (176-232)||(38766119-38766175)
[»] chr5 (3 HSPs)
chr5 (176-232)||(10591957-10592013)
chr5 (181-232)||(18909361-18909412)
chr5 (175-232)||(28023497-28023554)
[»] chr6 (3 HSPs)
chr6 (174-229)||(12836950-12837005)
chr6 (181-240)||(28099265-28099324)
chr6 (176-232)||(12411178-12411234)
[»] chr3 (1 HSPs)
chr3 (176-232)||(27763751-27763807)


Alignment Details
Target: chr8 (Bit Score: 108; Significance: 2e-54; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 27121648 - 27121869
Alignment:
Q  19 ttgttatgtatgtatctagttatgttcacatccattgagtaaataagagttttgataacagc-nnnnnnnntatactcagtactttattgtcacattctt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||         ||||||||||||||||||||  |||||||    
T  27121648 ttgttatgtatgtatctagttatgttcacatccattgagtaaataagagttctgataacagcaaaaaaaattatactcagtactttattgt--cattctt 27121745  T
Q  118 tctcccttgaaactttatgacatttaa-nnnnnnngtggacaaccgggtatccgagaagctcttcctaagagttttaacactgctacatacctaaagctg 216  Q
    |||||||||||||||||||||||||||        ||| |||| ||||||||| ||||||||||||||| ||||||||||||| | ||| | ||||||||    
T  27121746 tctcccttgaaactttatgacatttaatttttttggtgtacaaacgggtatccaagaagctcttcctaaaagttttaacactgttgcatgcttaaagctg 27121845  T
Q  217 gattcgaacccaggactttagtta 240  Q
    ||||||||||||| ||||| ||||    
T  27121846 gattcgaacccagaactttggtta 27121869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 2744020 - 2743963
Alignment:
Q  175 gctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||| ||||||||||||||||||||| ||| || || ||||||||||||||||||||    
T  2744020 gctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggac 2743963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 13468806 - 13468856
Alignment:
Q  182 ctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    |||||||||||||| ||||||||| || || ||||||||||||||||||||    
T  13468806 ctaagagttttaacgctgctacatgcccaaggctggattcgaacccaggac 13468856  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 8878150 - 8878201
Alignment:
Q  176 ctcttcctaagagttttaacactgctacatacctaaagctggattcgaaccc 227  Q
    ||||||||||||||||||||  || | ||| |||||||||||||||||||||    
T  8878150 ctcttcctaagagttttaacgttgttgcatgcctaaagctggattcgaaccc 8878201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 19715778 - 19715837
Alignment:
Q  173 aagctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||||| ||| ||||||||||| ||||| ||| || || ||||||||||||||||||||    
T  19715778 aagctctccctgagagttttaacgctgctgcatgcccaaggctggattcgaacccaggac 19715837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 4125078 - 4125135
Alignment:
Q  175 gctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||| |||||||||||||||| |||| ||| || || ||| ||||||||||||||||    
T  4125078 gctctccctaagagttttaacagtgctgcatgcccaaggcttgattcgaacccaggac 4125135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 15683016 - 15682959
Alignment:
Q  175 gctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||| ||||||||||||||| ||||| ||| || || ||||||||||||| ||||||    
T  15683016 gctctccctaagagttttaacgctgctgcatgcccaaggctggattcgaactcaggac 15682959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 24801467 - 24801403
Alignment:
Q  176 ctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggactttagtta 240  Q
    |||| |||||||||||||||| |||| ||| ||||| |||||||||||||| |||||||||||||    
T  24801467 ctctccctaagagttttaacagtgctgcatgcctaaggctggattcgaaccaaggactttagtta 24801403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 31733746 - 31733798
Alignment:
Q  176 ctcttcctaagagttttaacactgctacatacctaaagctggattcgaaccca 228  Q
    |||| ||||||||||||||| ||||| ||| ||||| |||| |||||||||||    
T  31733746 ctctccctaagagttttaactctgctgcatgcctaatgctgaattcgaaccca 31733798  T

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Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 37568787 - 37568838
Alignment:
Q  181 cctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||    
T  37568787 cctaagagttttaacactgctgcatgcctaaggctggattcgaacccaggac 37568838  T

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Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 44732627 - 44732684
Alignment:
Q  175 gctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||| ||||||||||||||||||||| ||| || || ||||||||||||||||||||    
T  44732627 gctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggac 44732684  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 9438192 - 9438255
Alignment:
Q  177 tcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggactttagtta 240  Q
    ||||||||||||||||||| ||||| ||| || || |||||||||||||| | |||||| ||||    
T  9438192 tcttcctaagagttttaaccctgctgcatgcccaaggctggattcgaaccaaagactttggtta 9438255  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 5394483 - 5394427
Alignment:
Q  175 gctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||| |||||||||||||||| |||| ||| || || ||||||||||||||||||||    
T  5394483 gctctccctaagagttttaaca-tgctgcatgcccaaggctggattcgaacccaggac 5394427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 38373044 - 38373101
Alignment:
Q  173 aagctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccagg 230  Q
    ||||||||||||||||||||| | ||||| ||| | ||| | ||||||||||||||||    
T  38373044 aagctcttcctaagagttttaccgctgctgcatgcataaggttggattcgaacccagg 38373101  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 42745171 - 42745223
Alignment:
Q  176 ctcttcctaagagttttaacactgctacatacctaaagctggattcgaaccca 228  Q
    |||| |||||||||||||||| |||| ||| || || ||||||||||||||||    
T  42745171 ctctccctaagagttttaacattgctgcatgcccaaggctggattcgaaccca 42745223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 26418 - 26361
Alignment:
Q  175 gctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||| ||||||||||||||||||||| ||| || || ||||||||||||||||||||    
T  26418 gctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggac 26361  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 29059892 - 29059835
Alignment:
Q  175 gctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||| ||||||||||||||||||||| ||| || || ||||||||||||||||||||    
T  29059892 gctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggac 29059835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 31492190 - 31492133
Alignment:
Q  175 gctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||| ||||||||||||||||||||| ||| || || ||||||||||||||||||||    
T  31492190 gctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggac 31492133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 8839341 - 8839392
Alignment:
Q  181 cctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||||||||||||| ||||| ||| || || ||||||||||||||||||||    
T  8839341 cctaagagttttaacgctgctgcatgcccaaggctggattcgaacccaggac 8839392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 13254155 - 13254212
Alignment:
Q  175 gctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||| ||||||||||| ||| ||||| ||| ||||| ||||||||||||| ||||||    
T  13254155 gctctccctaagagtttcaacgctgctgcatgcctaaggctggattcgaactcaggac 13254212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 21747094 - 21747150
Alignment:
Q  175 gctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||| ||||||||||||||| ||||  ||| |||||||||||||||| |||||||||    
T  21747094 gctctccctaagagttttaacgctgcagcatgcctaaagctggattcg-acccaggac 21747150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 19477301 - 19477357
Alignment:
Q  173 aagctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccag 229  Q
    ||||||| ||||||||||||||||||| | ||| || || ||||||||| |||||||    
T  19477301 aagctctccctaagagttttaacactgttgcatgcccaaggctggattcaaacccag 19477357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 31307120 - 31307177
Alignment:
Q  175 gctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||| ||||||||||||||||||||| ||| || || ||||||||||||||||||||    
T  31307120 gctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggac 31307177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 46016236 - 46016179
Alignment:
Q  175 gctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||| ||||||||||||||||||||| ||| || || ||||||||||||||||||||    
T  46016236 gctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggac 46016179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 56447177 - 56447241
Alignment:
Q  176 ctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggactttagtta 240  Q
    |||| ||||||||||||||||||||| ||| || | ||||||||||||||| |||||||| ||||    
T  56447177 ctctccctaagagttttaacactgctgcatgcccatagctggattcgaacctaggactttggtta 56447241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 13948647 - 13948698
Alignment:
Q  176 ctcttcctaagagttttaacactgctacatacctaaagctggattcgaaccc 227  Q
    |||| ||||||||||||||||||||| |||||| || |||||||||||||||    
T  13948647 ctctccctaagagttttaacactgctgcatacccaaggctggattcgaaccc 13948698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 9012359 - 9012300
Alignment:
Q  173 aagctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||||| ||||||||||| ||||||||| ||| || || ||| ||||||||||||||||    
T  9012359 aagctctccctaagagtttgaacactgctgcatgcccaaggctagattcgaacccaggac 9012300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 38844223 - 38844272
Alignment:
Q  176 ctcttcctaagagttttaacactgctacatacctaaagctggattcgaac 225  Q
    |||||||||||||||||||| ||| | ||| || ||||||||||||||||    
T  38844223 ctcttcctaagagttttaacgctgttgcatgcccaaagctggattcgaac 38844272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 14854694 - 14854638
Alignment:
Q  173 aagctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccag 229  Q
    ||||||| |||||||||||||||  |||| ||| || || |||||||||||||||||    
T  14854694 aagctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccag 14854638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 38766175 - 38766119
Alignment:
Q  176 ctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    |||| ||||||||||||||| ||||| ||| || || ||||||||| ||||||||||    
T  38766175 ctctccctaagagttttaacgctgctgcatgcccaaggctggattcaaacccaggac 38766119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 10592013 - 10591957
Alignment:
Q  176 ctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    |||| ||||||||||||||||||||| ||| || || ||||||||||||||||||||    
T  10592013 ctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggac 10591957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 18909361 - 18909412
Alignment:
Q  181 cctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||||||||||||||||||| |||||| || |||||||||||||| |||||    
T  18909361 cctaagagttttaacactgctgcatacccaaggctggattcgaacctaggac 18909412  T

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Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 28023497 - 28023554
Alignment:
Q  175 gctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    ||||| ||||| |||||||||||| ||| || ||||| ||||||||||||| ||||||    
T  28023497 gctctccctaaaagttttaacactactatatgcctaaggctggattcgaactcaggac 28023554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 12836950 - 12837005
Alignment:
Q  174 agctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccag 229  Q
    |||||| ||||||||||||||| ||||| ||| ||||| |||||||||||||||||    
T  12836950 agctctccctaagagttttaacgctgctgcatgcctaaggctggattcgaacccag 12837005  T

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Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 28099324 - 28099265
Alignment:
Q  181 cctaagagttttaacactgctacatacctaaagctggattcgaacccaggactttagtta 240  Q
    ||||| ||||||||||||||| ||| || || |||||||||||||||||||| |||||||    
T  28099324 cctaaaagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttagtta 28099265  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 12411234 - 12411178
Alignment:
Q  176 ctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    |||||||||||||||||||| ||||| ||| || || ||||||||||||| ||||||    
T  12411234 ctcttcctaagagttttaacgctgctgcatgcccaaggctggattcgaactcaggac 12411178  T

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Target: chr3 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 27763807 - 27763751
Alignment:
Q  176 ctcttcctaagagttttaacactgctacatacctaaagctggattcgaacccaggac 232  Q
    |||| ||||||||||||||||||| |  || || || ||||||||||||||||||||    
T  27763807 ctctccctaagagttttaacactgttgtatgcccaaggctggattcgaacccaggac 27763751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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