View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21235_high_20 (Length: 374)
Name: NF21235_high_20
Description: NF21235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21235_high_20 |
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Alignment Details
Target: chr2 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 5 - 359
Target Start/End: Complemental strand, 14741200 - 14740846
Alignment:
| Q |
5 |
taatagggttgtgttttagttttatttaagttggatgctcaaatgcttttagtctgaacatgtgggttgatctttctcaaacctttttatagtaatctca |
104 |
Q |
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| T |
14741200 |
taatagggttgtgttttggttttatttaagttggatgctcaaatgcttttagtctgaacatgtgggttgatctttctcaaaccttattatagtaatctca |
14741101 |
T |
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| Q |
105 |
atggttgcataaaacatcaatttgtgcaatactgggagtatgttccattacgatttgaaaagatttttctatgttgaaaaagtcttgtcgtactcattta |
204 |
Q |
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| T |
14741100 |
atggttgcataaaacatcaatttgtgcaatactgggagtatgttccattacgatttgaaaagatttttttatgttgaaaaagtcttgtcgtattcattta |
14741001 |
T |
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| Q |
205 |
aaaggtctagtgatatttcttgacttttaaaagtaattatggaaatcttgttgtattcccgaattttacaaaatcatgtttccgttgatgcatcaattgc |
304 |
Q |
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| T |
14741000 |
aaaggtctagtgatatttcttgacttataaaagtaattatggaaatcttgttgtattccctaattttacaaaatcatgtttctgttgatgcatcaattac |
14740901 |
T |
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| Q |
305 |
tgctactatttagactatattttgcattgatgattagtataaataaggttaatcc |
359 |
Q |
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| T |
14740900 |
tgctactatttagactatatcttgcattgatgattagtataaataaggttaatcc |
14740846 |
T |
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