View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21235_high_25 (Length: 330)
Name: NF21235_high_25
Description: NF21235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21235_high_25 |
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Alignment Details
Target: chr7 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 17 - 322
Target Start/End: Complemental strand, 37699362 - 37699056
Alignment:
| Q |
17 |
attttagcactataatttatattttcaaagggtttgtgtgtagtgcacataagtgtgaaatttaagagaagtatttgcacaaaggtttatagagtgtact |
116 |
Q |
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| T |
37699362 |
attttagcactgtaatttatattttcaaagggtttgtgtgtagtgcacataagtgtgaaatttaagagaagtatttgcacaaaggtttatagagtgtact |
37699263 |
T |
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| Q |
117 |
cgcaaacactcggttttacacacctaccatcgactataacctccaccttggatttttgtgcaaaaccaccactctcggatcattctttttatcgatccac |
216 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37699262 |
tgcaaacactcggttttacacccctaccatcgactataacctccaccttggatttttgtgcaaaaccaccactctcggatcattctttttatcgatccac |
37699163 |
T |
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| Q |
217 |
catcactataagatctcttacgataaatttgagttatata-tactcaaaacaattccaattccacacaaggaaactatggtggtaagtttggacattgct |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37699162 |
catcactataagatctcttacgataaatttgagttatatattactcaaaacaattccaattccacacaaggaaactatggtggtaagtttggacattgct |
37699063 |
T |
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| Q |
316 |
tcatctc |
322 |
Q |
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||||||| |
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| T |
37699062 |
tcatctc |
37699056 |
T |
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