View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21236_low_7 (Length: 393)
Name: NF21236_low_7
Description: NF21236
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21236_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 40382710 - 40383080
Alignment:
| Q |
1 |
agtgttatcaaacatctgaatccctttgacgaagcaccttggtggcttaatatcaaactcattctgaagcactccttcaaaagggtacttcaccagtgat |
100 |
Q |
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| T |
40382710 |
agtgttatcaaacatctgaatccctttgacgaagcaccttggtggcttaatatcaaactcattctgaagcactccttcaaaagggtacttcaccagtgat |
40382809 |
T |
|
| Q |
101 |
aggtaatggaaccatatccagtaaggtggaatcctatccctactgatgaagaatccactgaagagaagaaagtaagctaaaatagcaaccacaacggtga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40382810 |
aggtaatggaaccatatccagtaaggtggaatcctatccctacttatgaagaatccactgaagagaagaaagtaagctaaaatagcaaccacaacggtga |
40382909 |
T |
|
| Q |
201 |
aaccaagcatcacatgcgaaacaacgccggagaggaacgtgacgaaggagctcccagcccagaaggaagctaaaatggtgaaaaagtaaaagaggaaacc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40382910 |
aaccaagcatcacatgcgaaacaacgccggagaggaacgtgacgaaggagctcccagcccagaaggaagctaaaatggtgaaaaagtaaaagaggaaacc |
40383009 |
T |
|
| Q |
301 |
agatgtcccgccggcaagtccaacagaccaaaaagtggtgacggagaaggcgaaggagaggaagatgagtg |
371 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40383010 |
agatgtcccgccggcaagtccaacagaccaaaaagtggtgacggagaaggcgaaggagaggaagatgagtg |
40383080 |
T |
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