View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21237_high_6 (Length: 318)

Name: NF21237_high_6
Description: NF21237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21237_high_6
NF21237_high_6
[»] chr3 (1 HSPs)
chr3 (4-302)||(37709284-37709582)


Alignment Details
Target: chr3 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 4 - 302
Target Start/End: Original strand, 37709284 - 37709582
Alignment:
Q  4 atgtgggcaatggaagcagtgttaagcgacttgatttttgaagtgttaattggataaatagtcttttacgaaccttgtactttcagaaagtgtgaatctc 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37709284 atgtgggcaatggaagcagtgttaagcgacttgatttttgaagtgttaattggataaatagtcttttacgaaccttgtactttcagaaagtgtgaatctc 37709383  T
Q  104 atgaagttttctacttggaactcgatagtgaattctcttcgtggtgtaatatgtatgttagctttggtgaccatatagttttattaattatattgtgtca 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37709384 atgaagttttctacttggaactcgatagtgaattctcttcgtggtgtaatatgtatgttagctttggtgaccatatagttttattaattatattgtgtca 37709483  T
Q  204 ataatctttatcttcaatctatctttcctcaagatgttggtgaatgttaagaattttttgttaatattaagaggtgggactaaagagggaagaaaatca 302  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37709484 ataatctttatcttcaatctatctttcctcaagatgttagtgaatgttaagaattttttgttaatattaagaggtgggactaaagagggaagaaaatca 37709582  T

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