View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21239_high_46 (Length: 216)
Name: NF21239_high_46
Description: NF21239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21239_high_46 |
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Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 34864059 - 34863849
Alignment:
| Q |
1 |
aaagataattttcccgccattttgtaccc-gggctcaataatttggcgcgacaatttcacaaagtggaaggaaatcagcaactcaaacgagtcacagatt |
99 |
Q |
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| T |
34864059 |
aaagataattttcccgccattttgtaccccgggctcaataatttggcgcgacaatttcacaaagtggaaggaaatcagcaactcaaacgagtcacagatt |
34863960 |
T |
|
| Q |
100 |
gacatagcatttcactgttctaccttcgtcaccgcaagagaaagcaatggaagttgttcgacctcagagtcaccggaacttattttcctctaacgacgcc |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34863959 |
gacatagcatttcactgttctaccttcgtcaccgcaagagaaagcaatggaagttgttcgacctcagagtcaccggaacttattttcctctaacgacgcc |
34863860 |
T |
|
| Q |
200 |
gtctctgctcc |
210 |
Q |
| |
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|| |||||||| |
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| T |
34863859 |
gtttctgctcc |
34863849 |
T |
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