View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21239_low_17 (Length: 407)

Name: NF21239_low_17
Description: NF21239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21239_low_17
NF21239_low_17
[»] chr4 (45 HSPs)
chr4 (158-390)||(38974961-38975193)
chr4 (1-91)||(38975260-38975350)
chr4 (1-74)||(30342825-30342900)
chr4 (1-75)||(51436145-51436221)
chr4 (1-74)||(3716325-3716400)
chr4 (1-74)||(27538915-27538990)
chr4 (1-74)||(28037685-28037760)
chr4 (1-74)||(41759992-41760067)
chr4 (1-76)||(53389178-53389255)
chr4 (7-74)||(18425455-18425524)
chr4 (1-74)||(14802712-14802787)
chr4 (1-74)||(30539569-30539644)
chr4 (1-74)||(34280560-34280635)
chr4 (1-70)||(36592366-36592437)
chr4 (6-74)||(31908443-31908513)
chr4 (1-68)||(52589077-52589146)
chr4 (1-74)||(56361644-56361717)
chr4 (1-74)||(43137696-43137771)
chr4 (1-49)||(46041728-46041776)
chr4 (1-74)||(48579240-48579315)
chr4 (1-74)||(52809275-52809350)
chr4 (1-74)||(9858244-9858319)
chr4 (2-74)||(19842438-19842512)
chr4 (1-74)||(36091059-36091134)
chr4 (7-74)||(29646624-29646693)
chr4 (2-78)||(26117742-26117821)
chr4 (2-72)||(38835854-38835926)
chr4 (2-74)||(53936844-53936919)
chr4 (1-49)||(37855148-37855196)
chr4 (278-382)||(38955625-38955729)
chr4 (6-49)||(1414435-1414478)
chr4 (2-74)||(6807326-6807400)
chr4 (2-49)||(8256490-8256537)
chr4 (2-49)||(8269908-8269955)
chr4 (2-71)||(23059101-23059173)
chr4 (11-74)||(48066346-48066411)
chr4 (1-74)||(48647352-48647428)
chr4 (2-72)||(8749330-8749402)
chr4 (9-74)||(31681337-31681404)
chr4 (169-213)||(38955516-38955560)
chr4 (2-71)||(38961296-38961367)
chr4 (1-70)||(39162136-39162207)
chr4 (1-74)||(46216103-46216178)
chr4 (1-49)||(49625006-49625054)
chr4 (1-49)||(55722503-55722551)
[»] chr1 (53 HSPs)
chr1 (1-75)||(27295057-27295133)
chr1 (1-75)||(922173-922249)
chr1 (5-74)||(41073270-41073341)
chr1 (1-71)||(51781435-51781507)
chr1 (1-74)||(16482576-16482651)
chr1 (1-84)||(8461857-8461942)
chr1 (1-75)||(50905580-50905656)
chr1 (1-74)||(18641888-18641963)
chr1 (1-74)||(23304407-23304482)
chr1 (1-74)||(28493810-28493885)
chr1 (1-74)||(31931029-31931104)
chr1 (1-74)||(35305151-35305226)
chr1 (4-74)||(48760125-48760198)
chr1 (1-68)||(51519788-51519857)
chr1 (1-72)||(51984936-51985009)
chr1 (6-72)||(2247069-2247137)
chr1 (2-74)||(35874270-35874345)
chr1 (2-74)||(38717754-38717829)
chr1 (6-72)||(51184044-51184112)
chr1 (1-74)||(5956858-5956933)
chr1 (1-74)||(9166873-9166948)
chr1 (1-74)||(37498744-37498819)
chr1 (1-74)||(39190888-39190963)
chr1 (1-74)||(45423609-45423684)
chr1 (1-74)||(46771063-46771138)
chr1 (1-74)||(48616778-48616853)
chr1 (1-74)||(52303013-52303088)
chr1 (1-73)||(44246329-44246403)
chr1 (2-74)||(477766-477841)
chr1 (2-74)||(6965932-6966007)
chr1 (6-72)||(11778972-11779040)
chr1 (1-71)||(26102804-26102876)
chr1 (2-74)||(34038496-34038571)
chr1 (1-75)||(42317156-42317232)
chr1 (2-74)||(44263646-44263721)
chr1 (1-74)||(632979-633054)
chr1 (1-37)||(29106695-29106731)
chr1 (1-49)||(33098986-33099034)
chr1 (1-74)||(34256453-34256528)
chr1 (6-74)||(7121957-7122027)
chr1 (2-74)||(12227121-12227195)
chr1 (1-48)||(50239565-50239612)
chr1 (14-74)||(6234324-6234386)
chr1 (2-71)||(52345933-52346005)
chr1 (2-74)||(12105491-12105566)
chr1 (2-74)||(17554149-17554224)
chr1 (1-46)||(23056795-23056840)
chr1 (1-71)||(27352850-27352922)
chr1 (2-74)||(29953931-29954006)
chr1 (2-74)||(51787800-51787875)
chr1 (1-49)||(38262465-38262513)
chr1 (1-49)||(39971600-39971648)
chr1 (1-70)||(52260817-52260888)
[»] chr7 (29 HSPs)
chr7 (1-72)||(40941877-40941950)
chr7 (1-74)||(3909928-3910003)
chr7 (1-74)||(30624054-30624129)
chr7 (1-74)||(45857805-45857880)
chr7 (1-74)||(30862789-30862864)
chr7 (1-74)||(38129716-38129791)
chr7 (6-71)||(30936428-30936495)
chr7 (1-76)||(11485994-11486071)
chr7 (7-74)||(18990091-18990160)
chr7 (3-70)||(21699622-21699691)
chr7 (1-71)||(1691322-1691394)
chr7 (1-74)||(27956377-27956453)
chr7 (1-71)||(28326684-28326756)
chr7 (2-74)||(30076659-30076734)
chr7 (1-74)||(41381497-41381572)
chr7 (1-74)||(41913425-41913500)
chr7 (1-74)||(42974895-42974970)
chr7 (2-74)||(6791769-6791844)
chr7 (1-49)||(41331756-41331804)
chr7 (1-74)||(43750075-43750150)
chr7 (6-70)||(31482378-31482444)
chr7 (13-77)||(45458695-45458761)
chr7 (1-74)||(41968753-41968829)
chr7 (7-74)||(44964158-44964227)
chr7 (2-74)||(30891278-30891353)
chr7 (6-72)||(41809204-41809272)
chr7 (1-71)||(47748133-47748205)
chr7 (1-74)||(8770696-8770770)
chr7 (1-74)||(42710931-42711006)
[»] chr5 (32 HSPs)
chr5 (1-72)||(21605650-21605723)
chr5 (1-72)||(6560828-6560901)
chr5 (1-74)||(1662025-1662100)
chr5 (1-74)||(34302646-34302721)
chr5 (1-74)||(43237684-43237759)
chr5 (1-74)||(6114105-6114180)
chr5 (1-74)||(6532579-6532654)
chr5 (1-74)||(42917117-42917192)
chr5 (1-73)||(3056386-3056460)
chr5 (7-74)||(9589209-9589278)
chr5 (1-71)||(13090917-13090989)
chr5 (1-71)||(14967235-14967307)
chr5 (2-74)||(35162351-35162425)
chr5 (7-74)||(4618049-4618118)
chr5 (1-68)||(18228790-18228859)
chr5 (1-74)||(28332120-28332196)
chr5 (1-46)||(2029383-2029428)
chr5 (1-71)||(13410545-13410617)
chr5 (2-74)||(29959879-29959954)
chr5 (1-49)||(2141269-2141317)
chr5 (1-49)||(2413954-2414002)
chr5 (1-49)||(9534897-9534945)
chr5 (6-74)||(12362694-12362764)
chr5 (1-72)||(24097873-24097946)
chr5 (1-64)||(35817679-35817744)
chr5 (7-74)||(41802106-41802175)
chr5 (1-71)||(27116465-27116537)
chr5 (1-54)||(35682119-35682172)
chr5 (2-74)||(36339178-36339253)
chr5 (2-74)||(38293623-38293698)
chr5 (1-74)||(21051635-21051710)
chr5 (5-49)||(36752545-36752589)
[»] chr3 (40 HSPs)
chr3 (1-71)||(29347591-29347663)
chr3 (1-74)||(11140247-11140322)
chr3 (1-74)||(42067579-42067654)
chr3 (1-74)||(44670589-44670664)
chr3 (1-74)||(29786928-29787003)
chr3 (1-74)||(38785413-38785488)
chr3 (1-74)||(42364258-42364333)
chr3 (1-74)||(876553-876628)
chr3 (1-74)||(27082677-27082752)
chr3 (1-74)||(31308877-31308952)
chr3 (1-74)||(35171524-35171599)
chr3 (1-74)||(45636089-45636164)
chr3 (2-74)||(27079711-27079785)
chr3 (2-74)||(26885303-26885378)
chr3 (1-74)||(39630221-39630297)
chr3 (1-49)||(40650094-40650142)
chr3 (1-74)||(44365621-44365696)
chr3 (1-74)||(42848537-42848614)
chr3 (2-74)||(42622609-42622685)
chr3 (2-74)||(9506903-9506978)
chr3 (2-74)||(9514878-9514953)
chr3 (2-74)||(26457287-26457362)
chr3 (1-75)||(47948726-47948802)
chr3 (1-74)||(4663469-4663544)
chr3 (1-74)||(27647478-27647553)
chr3 (2-75)||(28718259-28718334)
chr3 (1-74)||(29491663-29491739)
chr3 (6-65)||(32717662-32717723)
chr3 (7-49)||(34593720-34593762)
chr3 (1-74)||(44522023-44522099)
chr3 (1-71)||(7671806-7671878)
chr3 (2-74)||(40021079-40021154)
chr3 (8-74)||(43715086-43715154)
chr3 (7-48)||(47470456-47470497)
chr3 (1-74)||(19547489-19547564)
chr3 (1-74)||(21289144-21289219)
chr3 (1-74)||(25592337-25592412)
chr3 (2-71)||(31479559-31479630)
chr3 (1-49)||(40473862-40473910)
chr3 (1-72)||(40477759-40477833)
[»] chr8 (32 HSPs)
chr8 (1-74)||(37511088-37511163)
chr8 (1-74)||(945976-946051)
chr8 (1-75)||(2273009-2273085)
chr8 (1-74)||(14498634-14498709)
chr8 (1-74)||(19718682-19718757)
chr8 (1-74)||(28090192-28090267)
chr8 (5-74)||(29773445-29773516)
chr8 (1-74)||(36002356-36002431)
chr8 (1-49)||(10280587-10280635)
chr8 (1-74)||(15726221-15726296)
chr8 (1-74)||(23286565-23286640)
chr8 (1-74)||(29229508-29229583)
chr8 (1-74)||(38502184-38502259)
chr8 (1-74)||(17642074-17642149)
chr8 (1-72)||(44934901-44934974)
chr8 (7-77)||(37465681-37465753)
chr8 (1-74)||(16323559-16323634)
chr8 (1-74)||(34332112-34332187)
chr8 (6-74)||(42444554-42444624)
chr8 (1-72)||(1043060-1043134)
chr8 (2-38)||(11110404-11110440)
chr8 (1-49)||(23274649-23274697)
chr8 (1-74)||(37161504-37161579)
chr8 (1-74)||(43049537-43049611)
chr8 (1-74)||(43485372-43485447)
chr8 (7-75)||(4475045-4475114)
chr8 (6-74)||(6800108-6800178)
chr8 (2-72)||(34633865-34633938)
chr8 (1-74)||(29454540-29454616)
chr8 (2-71)||(40776950-40777022)
chr8 (1-74)||(529267-529342)
chr8 (1-74)||(39347461-39347536)
[»] chr2 (31 HSPs)
chr2 (1-78)||(6884155-6884234)
chr2 (1-72)||(34665573-34665646)
chr2 (1-71)||(11813528-11813600)
chr2 (1-74)||(58920-58995)
chr2 (1-74)||(4673933-4674008)
chr2 (1-74)||(5091997-5092072)
chr2 (1-74)||(11227627-11227702)
chr2 (1-74)||(14533153-14533228)
chr2 (1-74)||(12547364-12547439)
chr2 (3-74)||(3383520-3383593)
chr2 (1-72)||(5389532-5389605)
chr2 (1-74)||(6438506-6438580)
chr2 (1-74)||(6513595-6513670)
chr2 (1-74)||(42427902-42427977)
chr2 (6-72)||(36489360-36489428)
chr2 (1-74)||(1353507-1353580)
chr2 (1-74)||(37909379-37909454)
chr2 (1-75)||(1580572-1580649)
chr2 (6-49)||(5420254-5420297)
chr2 (2-72)||(30980882-30980955)
chr2 (2-74)||(42641183-42641257)
chr2 (1-74)||(11598114-11598190)
chr2 (160-214)||(14960031-14960085)
chr2 (2-75)||(39620190-39620266)
chr2 (1-46)||(37083238-37083283)
chr2 (2-74)||(45157530-45157605)
chr2 (7-72)||(8371903-8371970)
chr2 (1-74)||(15771641-15771716)
chr2 (9-74)||(32499150-32499217)
chr2 (1-74)||(34438517-34438592)
chr2 (1-74)||(38963395-38963470)
[»] chr6 (18 HSPs)
chr6 (1-72)||(2258905-2258978)
chr6 (1-74)||(6848510-6848585)
chr6 (1-74)||(8401747-8401822)
chr6 (3-74)||(24212912-24212985)
chr6 (1-64)||(24487618-24487683)
chr6 (1-74)||(1096221-1096296)
chr6 (1-74)||(13390385-13390460)
chr6 (1-74)||(26358884-26358959)
chr6 (1-74)||(32834105-32834180)
chr6 (1-74)||(11446736-11446811)
chr6 (1-72)||(17545607-17545680)
chr6 (1-74)||(8549885-8549961)
chr6 (2-74)||(9661752-9661827)
chr6 (1-74)||(4110551-4110626)
chr6 (2-74)||(9686776-9686851)
chr6 (2-74)||(16892903-16892978)
chr6 (1-71)||(30020689-30020761)
chr6 (5-49)||(4901284-4901328)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-74)||(36940-37015)
[»] scaffold0625 (1 HSPs)
scaffold0625 (7-74)||(6600-6669)
[»] scaffold0432 (1 HSPs)
scaffold0432 (1-76)||(3360-3438)
[»] scaffold0060 (1 HSPs)
scaffold0060 (2-74)||(45761-45836)
[»] scaffold0077 (1 HSPs)
scaffold0077 (5-49)||(48037-48081)
[»] scaffold0184 (1 HSPs)
scaffold0184 (4-74)||(16916-16989)
[»] scaffold0078 (1 HSPs)
scaffold0078 (4-74)||(55855-55928)
[»] scaffold0604 (1 HSPs)
scaffold0604 (6-72)||(2022-2090)


Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 158 - 390
Target Start/End: Complemental strand, 38975193 - 38974961
Alignment:
Q  158 gcttgtagggtatgcttcttgctggaacagactcatcagctgtaacattagagtgggcattatcttgtgtattgactcatccagaggtactagagacagc 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  38975193 gcttgtagggtatgcttcttgctggaacagactcatcagctgtaacattagagtgggcattatcttgtgtattgactcatccagaggtactagagacggc 38975094  T
Q  258 aaggtatgaaatagaaagcaatgtaggtcaagaccgtttgttggatgaatctgacctaccaaaactcccttaccttaaaaatatcatctatgagacactt 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38975093 aaggtatgaaatagaaagcaatgtaggtcaagaccgtttgttggatgaatctgacctaccaaaactcccttaccttaaaaatatcatctatgagacactt 38974994  T
Q  358 aggttgtacactcctgctccattgtcattgcca 390  Q
    |||||||||||||||||||||||||||||||||    
T  38974993 aggttgtacactcctgctccattgtcattgcca 38974961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 38975350 - 38975260
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaattttgggtgtaccatagaatttgccctaacattaaccattac 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38975350 taactcatttaactattaatttaaagattttgtgtactaatacactcaattttgggtgtaccatagaatttgcccaaacattaaccattac 38975260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30342900 - 30342825
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||| |  |||||||||||||| ||||||||    
T  30342900 taactcatttaactattaatttaaagatttggtgtaccaatacactcaaatggttgggtgtaccatataatttgcc 30342825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 51436145 - 51436221
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccc 75  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||||||  | ||||||||||||||||||||||||    
T  51436145 taactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgccc 51436221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3716400 - 3716325
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||| ||||||||||||||||||    
T  3716400 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgcc 3716325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27538990 - 27538915
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||||||||||||||||| |||||    
T  27538990 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 27538915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28037760 - 28037685
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||||||| |||||||||||||||    
T  28037760 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgcaccatagaatttgcc 28037685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 41759992 - 41760067
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||| ||||||||||||||||||    
T  41759992 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgcc 41760067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 53389178 - 53389255
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccct 76  Q
    |||||||||||||||||||||||||||||| ||||||  ||||||||||  | || | ||||||||||||||||||||    
T  53389178 taactcatttaactattaatttaaagatttagtgtaccgatacactcaaattgtttgatgtaccatagaatttgccct 53389255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 18425455 - 18425524
Alignment:
Q  7 atttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||| ||||| |||||| |||||||||| || ||||||||||||||||||||||||    
T  18425455 atttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 18425524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14802787 - 14802712
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||  |||||||||||  | ||| |||||||||||||||||||    
T  14802787 taactcatttaactattaatttaaggatttggtgtatcaatacactcaaattgttgagtgtaccatagaatttgcc 14802712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30539644 - 30539569
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||| ||  | ||||||||||||||||| |||||    
T  30539644 taactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 30539569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34280560 - 34280635
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||| |||||||||||||||||| ||||| |||||| |||||||||||  | ||||||||||||||||| |||||    
T  34280560 taacttatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 34280635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 36592366 - 36592437
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatt 70  Q
    |||||||||||||||||||||||| ||||| |||||  |||||||||||  |||||||||||||||| ||||    
T  36592366 taactcatttaactattaatttaaggatttggtgtaacaatacactcaaatttttgggtgtaccataaaatt 36592437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 31908513 - 31908443
Alignment:
Q  6 catttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||| ||||| |||||| |||||||||| || |||||||||| |||||||||||||    
T  31908513 catttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtatcatagaatttgcc 31908443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 52589146 - 52589077
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaa 68  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||| ||||||||||||    
T  52589146 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttggatgtaccatagaa 52589077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 56361644 - 56361717
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaattttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||  ||||| |||||| ||||||||||| |||  ||||| |||||||||||||    
T  56361644 taacacatttaactattaatttattgatttggtgtaccaatacactcaaatttttgtgtaacatagaatttgcc 56361717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43137696 - 43137771
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||| ||  | ||||||||||||||||| |||||    
T  43137696 taactcatttaactattaatttaagaatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 43137771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 46041776 - 46041728
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    |||||||||||||||||||||||||||||| |||||  |||||||||||    
T  46041776 taactcatttaactattaatttaaagatttggtgtatcaatacactcaa 46041728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 48579240 - 48579315
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||| ||||  | |||| ||||||||| ||||||||    
T  48579240 taactcatttaactattaatttaaggatttggtgtaccaatacattcaaattgttggatgtaccatataatttgcc 48579315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 52809275 - 52809350
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||| |||  |||||| |||||||||||  | |||| |||||||||| |||||||    
T  52809275 taactcatttaactattaatttaaaaattcggtgtaccaatacactcaaattgttggatgtaccatagtatttgcc 52809350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 9858319 - 9858244
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||| ||||| |||||  |||||||||| || ||||||||||| ||||||||||||    
T  9858319 taacacatttaactattaatttaatgatttggtgtatcaatacactcatatctttgggtgtactatagaatttgcc 9858244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 19842512 - 19842438
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||| |||||||||||  |||| |||||||  |||||||||  |||||| ||||||||||||||||||    
T  19842512 aactcatttaattattaatttaacaatttggtgtactggtacactcaaatttttggatgtaccatagaatttgcc 19842438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36091134 - 36091059
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||| ||||| |||||| |||||||||| || ||||| ||||||||| ||||||||    
T  36091134 taacacatttaactattaatttaatgatttggtgtaccaatacactcatatctttggatgtaccatataatttgcc 36091059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 29646693 - 29646624
Alignment:
Q  7 atttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||  ||||| |||||| |||||||||  |||||| | ||||||||||||||||||    
T  29646693 atttaactattaatttattgatttggtgtaccaatacactcaaaatttttgatgtaccatagaatttgcc 29646624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 26117821 - 26117742
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgccctaa 78  Q
    |||||||||||||||||||||||||| |  ||||||| |||||||||   || |||| ||||||||| |||||| |||||    
T  26117821 aactcatttaactattaatttaaagaatgagtgtactgatacactcaaatatattggatgtaccataaaatttgtcctaa 26117742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 38835926 - 38835854
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 72  Q
    |||||||||||||||||||||||  ||||  ||||| |||||||||||  | || ||||||||||||||||||    
T  38835926 aactcatttaactattaatttaagaatttgatgtaccaatacactcaaattattaggtgtaccatagaatttg 38835854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 53936844 - 53936919
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||||| |  ||||||   ||||||||   || |||||||||||||||||||||||    
T  53936844 aactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 53936919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37855196 - 37855148
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    |||||||||||||||||||||||| ||||| ||||||  ||||||||||    
T  37855196 taactcatttaactattaatttaaggatttggtgtacctatacactcaa 37855148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 382
Target Start/End: Original strand, 38955625 - 38955729
Alignment:
Q  278 atgtaggtcaagaccgtttgttggatgaatctgacctaccaaaactcccttaccttaaaaatatcatctatgagacacttaggttgtacactcctgctcc 377  Q
    ||||||| ||||| |||||| | |||||||| ||||| || |||||  ||||||| | |||| | ||||| ||||| ||| | ||||| |||||||||||    
T  38955625 atgtaggacaagatcgtttggttgatgaatcagaccttccgaaactaacttacctaagaaatgttatctacgagacccttcgattgtatactcctgctcc 38955724  T
Q  378 attgt 382  Q
    |||||    
T  38955725 attgt 38955729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 1414435 - 1414478
Alignment:
Q  6 catttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    ||||||||||||||||||| ||||| |||||| |||||||||||    
T  1414435 catttaactattaatttaatgatttggtgtaccaatacactcaa 1414478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 6807326 - 6807400
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| |||||| ||||||||||| | ||| ||||||| ||||| ||||  | |||||||||||||||||||||||    
T  6807326 aactaatttaattattaatttaatgttttggtgtactgatacattcaaaatgttgggtgtaccatagaatttgcc 6807400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 8256537 - 8256490
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    ||||||||||||||| |||||||||| || |||||||| |||||||||    
T  8256537 aactcatttaactatgaatttaaagagttagtgtactagtacactcaa 8256490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 8269955 - 8269908
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    ||||||||||||||| |||||||||| || |||||||| |||||||||    
T  8269955 aactcatttaactatgaatttaaagagttagtgtactagtacactcaa 8269908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 23059101 - 23059173
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaattt 71  Q
    |||||||||||| ||||||||||||| |  ||||||  |||||||||   || ||||||||||||||||||||    
T  23059101 aactcatttaacgattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaattt 23059173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 48066346 - 48066411
Alignment:
Q  11 aactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||| ||||| || ||| ||||||||||| |  |||| ||||||||||||||||||    
T  48066346 aactattaatttaatgatttggtataccaatacactcaaatgattggatgtaccatagaatttgcc 48066411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 48647352 - 48647428
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||| |||||| |  ||||||   ||||||||   || |||||||||||||||||||||||    
T  48647352 taactcatttaactattaatctaaagagtgagtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 48647428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 8749402 - 8749330
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 72  Q
    ||||||||||| ||||||||||| ||||| |||||| | |||||| ||  |||||| | ||||||||||||||    
T  8749402 aactcatttaattattaatttaacgatttagtgtacgagtacacttaattttttggatataccatagaatttg 8749330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 31681404 - 31681337
Alignment:
Q  9 ttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||  ||||| |||||| |||||||  ||  |||| ||||||||||||||||||||    
T  31681404 ttaactattaatttattgatttggtgtaccaatacaccaaaatttttaggtgtaccatagaatttgcc 31681337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 38955516 - 38955560
Alignment:
Q  169 atgcttcttgctggaacagactcatcagctgtaacattagagtgg 213  Q
    ||||| ||||||||||| |||||||| || |||||||||||||||    
T  38955516 atgctccttgctggaacggactcatctgccgtaacattagagtgg 38955560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 38961296 - 38961367
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 71  Q
    |||||||||||   ||||||||| ||||| ||||||  ||||| ||||  ||||||||||||||||||||||    
T  38961296 aactcatttaatgtttaatttaacgatttggtgtaccgatacaatcaaaattttgggtgtaccatagaattt 38961367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39162136 - 39162207
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatt 70  Q
    |||| ||||||||||||||||||  || || |||||| ||||||| |||  ||||| |||||||||||||||    
T  39162136 taacacatttaactattaatttattgacttggtgtaccaatacacccaaatttttgagtgtaccatagaatt 39162207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 46216103 - 46216178
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||| |||||||||   ||||  |||||| |||||||||||  |||||||||||| ||||||||||||    
T  46216103 taacacatttaattattaatttgttgattgggtgtaccaatacactcaaatttttgggtgtacaatagaatttgcc 46216178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 49625054 - 49625006
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    |||||||||||||| ||| || ||||||||| |||||||||||| ||||    
T  49625054 taactcatttaactgttacttgaaagattttatgtactaatacagtcaa 49625006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 55722551 - 55722503
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    ||||||| |||||||||||||||| ||||| |||||| |||||| ||||    
T  55722551 taactcaattaactattaatttaaggatttagtgtaccaatacattcaa 55722503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 7e-22; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 27295133 - 27295057
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccc 75  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||  | ||||||||||||||||||||||||    
T  27295133 taactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgccc 27295057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 922173 - 922249
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccc 75  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||||||||||||||||||||||||    
T  922173 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgccc 922249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 41073341 - 41073270
Alignment:
Q  5 tcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||| |||||||||||| ||||||||||| |  |||||||||||||||||||||||    
T  41073341 tcatttaactattaatttaaggattttgtgtaccaatacactcaaatggttgggtgtaccatagaatttgcc 41073270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 51781435 - 51781507
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 71  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||||||||||||||||||||    
T  51781435 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaattt 51781507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 16482651 - 16482576
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||| ||  | |||||||||||||||||||||||    
T  16482651 taactcatttaactattaatttaaggatttggtgtaccaatacacttaaattattgggtgtaccatagaatttgcc 16482576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 8461857 - 8461942
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgccctaacattaa 84  Q
    |||||||||||||||||||||||| ||||| |||||| ||||||||||| |  |||| |||||||||||| ||||| ||| |||||    
T  8461857 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaatggttggatgtaccatagaagttgccataaaattaa 8461942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 50905656 - 50905580
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccc 75  Q
    |||||||||||||||||||||||| ||||  |||||| |||||||||||  | ||||||||||||||||| ||||||    
T  50905656 taactcatttaactattaatttaaggattcggtgtaccaatacactcaaattgttgggtgtaccatagaacttgccc 50905580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18641963 - 18641888
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||| ||||||||||||| |||||    
T  18641963 taactcatttaactattaatttaaggatttagtgtaccaatacactcaaattgttgagtgtaccatagaacttgcc 18641888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 23304482 - 23304407
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||  |  ||||||||||||||||| ||||||    
T  23304482 taacacatttaactattaatttaatgattttgtgtaccaatacactcgtatctttgggtgtaccatagattttgcc 23304407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28493885 - 28493810
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||  |||||||| ||  | |||||||||||||||||||||||    
T  28493885 taactcatttaactattaatttaaggatttggtgtaacaatacacttaaattattgggtgtaccatagaatttgcc 28493810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 31931029 - 31931104
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| |||||  ||||| |||||||||||  | |||| ||||||||||||||||||    
T  31931029 taactcatttaactattaatttaaggatttgatgtaccaatacactcaaattgttggatgtaccatagaatttgcc 31931104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35305226 - 35305151
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||| ||||||||||||||||||  |||| |||||| |||||||||||  | |||||||||||||||||||||||    
T  35305226 taacttatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 35305151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 48760198 - 48760125
Alignment:
Q  4 ctcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||| |||||||||| || |||||||||||||||||   ||  ||||||||||||||||||||||    
T  48760198 ctcatttaactatgaatttaaagagttagtgtactaatacactcaaatatagtgggtgtaccatagaatttgcc 48760125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 51519857 - 51519788
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaa 68  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||||||  | |||||||||||||||||    
T  51519857 taactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaa 51519788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 51985009 - 51984936
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 72  Q
    |||||||||||||||||||||||| |||||  ||||| |||||||||||  | ||| |||||||||||||||||    
T  51985009 taactcatttaactattaatttaaggatttgatgtaccaatacactcaaattattgagtgtaccatagaatttg 51984936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 2247137 - 2247069
Alignment:
Q  6 catttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 72  Q
    ||||||||||||||||||| ||||| |||||| |||||||||||   ||| ||||||||||||||||||    
T  2247137 catttaactattaatttaatgatttggtgtaccaatacactcaaatctttaggtgtaccatagaatttg 2247069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 35874270 - 35874345
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||||| |  |||||| ||||||||||   || |||||||||||||||||||||||    
T  35874270 aacttatttaactattaatttaaagagtgagtgtaccaatacactcaaatatattgggtgtaccatagaatttgcc 35874345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 38717829 - 38717754
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||| |||||||||| || |||||||| ||||||||   ||  ||||||||||||||||||||||    
T  38717829 aactcatttaactatgaatttaaagagttagtgtactagtacactcaaatatagtgggtgtaccatagaatttgcc 38717754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 51184112 - 51184044
Alignment:
Q  6 catttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 72  Q
    ||||||||||||||||||| |||||  ||||| |||||||||||   ||||||||||||||||||||||    
T  51184112 catttaactattaatttaatgatttgttgtaccaatacactcaaatctttgggtgtaccatagaatttg 51184044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 5956858 - 5956933
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||| |||  |||||| |||||||| ||  | |||||||||||||| ||||||||    
T  5956858 taactcatttaactattaatttaaaaattcggtgtaccaatacacttaaattgttgggtgtaccatataatttgcc 5956933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 9166948 - 9166873
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||  ||||| |||||| |||||||||||  |||||||||||| ||| ||||||||    
T  9166948 taacacatttaactattaatttattgatttggtgtaccaatacactcaaatttttgggtgtactatataatttgcc 9166873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37498819 - 37498744
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||| ||||||||||||||||||  |||| |||||| |||||||||||  | |||| ||||||||||||||||||    
T  37498819 taacttatttaactattaatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgcc 37498744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 39190888 - 39190963
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||||||  | |||| |||||||||||| |||||    
T  39190888 taactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaacttgcc 39190963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 45423684 - 45423609
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||| ||  | |||| |||||||||||| |||||    
T  45423684 taactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttggatgtaccatagaacttgcc 45423609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 46771063 - 46771138
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| || ||| |||||||||||  | || |||||||||||||| |||||    
T  46771063 taactcatttaactattaatttaaggatttggtataccaatacactcaaattgttaggtgtaccatagaacttgcc 46771138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 48616778 - 48616853
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||  ||||  |||||| |||||||||||  ||||| |||||||||||||||||||    
T  48616778 taacacatttaactattaatttattgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 48616853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 52303088 - 52303013
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||  ||||  ||||| |||||||||||  | ||||||||| |||||||||||||    
T  52303088 taactcatttaactattaatttaagaatttgatgtaccaatacactcaaattattgggtgtatcatagaatttgcc 52303013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 44246329 - 44246403
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgc 73  Q
    |||||||||||||||||||||||| ||||| |||||| |||||| ||  | |||||| | |||||||||||||||    
T  44246329 taactcatttaactattaatttaaggatttggtgtaccaatacattcgaacttttggatataccatagaatttgc 44246403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 477766 - 477841
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    |||||||||||| ||||||||||||| |  ||||||  |||||||||   || |||||||||||||||||||||||    
T  477766 aactcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 477841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 6966007 - 6965932
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||| || ||||||| || |||||||| ||||||||   ||  ||||||||||||||||||||||    
T  6966007 aactcatttaactatgaaattaaagagttagtgtactagtacactcaaatatagtgggtgtaccatagaatttgcc 6965932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 11778972 - 11779040
Alignment:
Q  6 catttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 72  Q
    ||||||||||||||||||| |||||  ||||| |||||||||||   ||||||||||||||| ||||||    
T  11778972 catttaactattaatttaatgatttgttgtaccaatacactcaaatctttgggtgtaccatataatttg 11779040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26102804 - 26102876
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 71  Q
    |||||||||||||||||||||||| ||||| |||||  |||||||| ||  | ||| ||||||||||||||||    
T  26102804 taactcatttaactattaatttaaggatttggtgtatcaatacacttaaattattgagtgtaccatagaattt 26102876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 34038496 - 34038571
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| | |  |||||| ||||||||||   || |||| ||||||||||||||||||    
T  34038496 aactcatttaactattaatttaaaaagtgagtgtaccaatacactcaaatatattggatgtaccatagaatttgcc 34038571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 42317156 - 42317232
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgccc 75  Q
    |||| ||||||||||||||||||  |||||  ||||| |||||||||  ||||||| |||||||||| |||||||||    
T  42317156 taacacatttaactattaatttattgatttgatgtaccaatacactcaaaattttgagtgtaccatataatttgccc 42317232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 44263721 - 44263646
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||||    |||||  ||||||||||   || |||||||||||||||||||||||    
T  44263721 aactcatttaactattaatttaaagagcgagtgtatcaatacactcaaatatattgggtgtaccatagaatttgcc 44263646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 632979 - 633054
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| |||||||||||||||||   ||||  |||||| |||||||||||  ||||| |||||||||||||||||||    
T  632979 taacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 633054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29106695 - 29106731
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtac 37  Q
    |||||||||||||||||||||||||||||| ||||||    
T  29106695 taactcatttaactattaatttaaagatttggtgtac 29106731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33098986 - 33099034
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    |||| ||||||||||||||||||  |||||||||||| |||||||||||    
T  33098986 taacacatttaactattaatttattgattttgtgtaccaatacactcaa 33099034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 34256528 - 34256453
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaattt--tgggtgtaccatagaatttgcc 74  Q
    |||||| ||||| |||||||||||  |||| ||||||  |||||||||| ||  ||||||||||||||||||||||    
T  34256528 taactcgtttaattattaatttaataatttggtgtaccgatacactcaaattgttgggtgtaccatagaatttgcc 34256453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 7122027 - 7121957
Alignment:
Q  6 catttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||| |||||  ||||| |||||||||||   ||| ||| ||||||||||||||||    
T  7122027 catttaactattaatttaatgatttgttgtaccaatacactcaaatctttaggtataccatagaatttgcc 7121957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 12227195 - 12227121
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| |||||| ||||||||||| | ||| |||||||  |||||||||  | |||||||||||||||||||||||    
T  12227195 aactaatttaattattaatttaatgctttggtgtactggtacactcaaaatgttgggtgtaccatagaatttgcc 12227121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 50239565 - 50239612
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca 48  Q
    |||| ||||||||||||||||||| ||||| |||||| ||||||||||    
T  50239565 taacacatttaactattaatttaatgatttagtgtaccaatacactca 50239612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 6234324 - 6234386
Alignment:
Q  14 tattaatttaaagattttgtgtactaatacac-tcaatttt-gggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||| |||||  ||||||| ||||||||  ||||||||||||||||||||    
T  6234324 tattaatttaaagatttggtgtagcaatacacttcaattttcaggtgtaccatagaatttgcc 6234386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 52345933 - 52346005
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaattt 71  Q
    |||||||||||||||||||||||||| |  |||||||  ||||||||   || |||||||||| |||||||||    
T  52345933 aactcatttaactattaatttaaagagtgggtgtactggtacactcaaatatattgggtgtacaatagaattt 52346005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 12105491 - 12105566
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaatt---ttgggtgtaccatagaatttgcc 74  Q
    ||||| |||||||||||||||||||| |  ||||| |  ||||||||| |   |||||||||||||||||||||||    
T  12105491 aactcttttaactattaatttaaagagtgggtgtattggtacactcaaatatattgggtgtaccatagaatttgcc 12105566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 17554149 - 17554224
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaatt---ttgggtgtaccatagaatttgcc 74  Q
    |||||||||||| ||||||||||||| |  ||||||   ||||||||| |   |||||||||||||||||||||||    
T  17554149 aactcatttaaccattaatttaaagagtgagtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 17554224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 23056840 - 23056795
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacact 46  Q
    ||||||||||||||||||||||||| |||  |||||| ||||||||    
T  23056840 taactcatttaactattaatttaaaaattcggtgtaccaatacact 23056795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27352922 - 27352850
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 71  Q
    |||| |||||||||||||||| ||  ||||||||||  |||||||||||   ||||| |||||||||||||||    
T  27352922 taacacatttaactattaattcaataattttgtgtatcaatacactcaaatctttggatgtaccatagaattt 27352850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 29953931 - 29954006
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||| ||| ||||| ||||||   ||||||||   ||||||| |||||||||| |||||||    
T  29953931 aactcatttaactattaatataaggatttggtgtaccggtacactcaaatattttggatgtaccatagtatttgcc 29954006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 51787800 - 51787875
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||||| |  ||||||   ||||||||   || |||| ||||||||||||||||||    
T  51787800 aactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattggatgtaccatagaatttgcc 51787875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38262465 - 38262513
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    ||||||||||||| ||||||||||  |||| |||||| |||||||||||    
T  38262465 taactcatttaacaattaatttaagaatttggtgtaccaatacactcaa 38262513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39971600 - 39971648
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    ||||||||||||||||||||||||  |||| || ||| |||||||||||    
T  39971600 taactcatttaactattaatttaagaatttggtataccaatacactcaa 39971648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 52260888 - 52260817
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaat--tttgggtgtaccatagaatt 70  Q
    |||| ||||||||||||||||||  ||||| |||||| |||||| |||||  |||| |||||||||| ||||    
T  52260888 taacacatttaactattaatttattgatttggtgtaccaatacattcaattctttgagtgtaccatataatt 52260817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 4e-20; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 40941950 - 40941877
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 72  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||  | ||| |||||||||||||||||    
T  40941950 taactcatttaactattaatttaaagattttgtgtaccaatacactcaaattgttgagtgtaccatagaatttg 40941877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3910003 - 3909928
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||| |||  |||||| |||||||||||  | |||||||||||||||||||||||    
T  3910003 taactcatttaactattaatttaaaaattcggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 3909928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 30624054 - 30624129
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||||||  | ||||||||||||||||| |||||    
T  30624054 taactcatttaactattaatttaaaaatttggtgtaccaatacactcaaattattgggtgtaccatagaacttgcc 30624129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45857805 - 45857880
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||| ||||| |||||| |||||||||| || ||||||||||||||||||||||||    
T  45857805 taacacatttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 45857880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30862864 - 30862789
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||| ||  | ||||||||||||||||| |||||    
T  30862864 taactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 30862789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38129716 - 38129791
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||||||  | |||||| |||||||||| |||||    
T  38129716 taactcatttaactattaatttaaaaatttggtgtaccaatacactcaaattattgggtctaccatagaacttgcc 38129791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 30936428 - 30936495
Alignment:
Q  6 catttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaattt 71  Q
    ||||||||||||||||||| |||||||||||| |||||||||| || |||||||||| ||||||||||    
T  30936428 catttaactattaatttaatgattttgtgtaccaatacactcatatctttgggtgtatcatagaattt 30936495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11486071 - 11485994
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccct 76  Q
    |||| ||||||||||||||||||| ||||| |||||| ||||| || ||   ||||||||||||||||||||||||||    
T  11486071 taacacatttaactattaatttaatgatttggtgtaccaatactcttaaatctttgggtgtaccatagaatttgccct 11485994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 18990160 - 18990091
Alignment:
Q  7 atttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||  ||||| |||||| |||||||||||  |||| ||||||||||||||||||||    
T  18990160 atttaactattaatttattgatttggtgtaccaatacactcaaattttttggtgtaccatagaatttgcc 18990091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 21699622 - 21699691
Alignment:
Q  3 actcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatt 70  Q
    |||||||||||||||||||||| ||||| |||||| |||||||| ||  | |||||||||||||||||||    
T  21699622 actcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaatt 21699691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1691322 - 1691394
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaattt 71  Q
    |||||||||||||||||||||||| |||||  ||||| ||||||||||| |  |||| |||||||||||||||    
T  1691322 taactcatttaactattaatttaaggatttgatgtaccaatacactcaaatggttggatgtaccatagaattt 1691394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27956453 - 27956377
Alignment:
Q  1 taactcatttaactattaa-tttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||| ||||||||||| |||||| |||| ||||||  | || ||||||||||||||||||||    
T  27956453 taactcatttaactattaattttaaagatttggtgtaccaatatactcaaattgttaggtgtaccatagaatttgcc 27956377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 28326756 - 28326684
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 71  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||| ||||| |||||||||    
T  28326756 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtacgatagaattt 28326684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 30076734 - 30076659
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||| |||||||||| || |||||||| ||||||||   ||  ||||||||||||||||||||||    
T  30076734 aactcatttaactatgaatttaaagagttagtgtactagtacactcaaatatagtgggtgtaccatagaatttgcc 30076659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41381572 - 41381497
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||| |||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||    
T  41381572 taactcatttaactattactttaaagatttgatgtaccaatacactcaaattgtttggtgtaccatataatttgcc 41381497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 41913425 - 41913500
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||| |||||||||||||||||| ||||| |||||| |||||||||||  | |||| ||||||||| ||||||||    
T  41913425 taacttatttaactattaatttaaggatttggtgtaccaatacactcaaattgttggatgtaccatataatttgcc 41913500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42974970 - 42974895
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 74  Q
    |||| |||||||||| |||||||| ||||| |||||| ||| |||||| || ||||||||||||||||||||||||    
T  42974970 taacacatttaactactaatttaatgatttggtgtaccaatgcactcatatgtttgggtgtaccatagaatttgcc 42974895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 6791769 - 6791844
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    |||||||||||| ||||||||||||| |  ||||||  |||||||||   || |||||||||||||||||||||||    
T  6791769 aactcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 6791844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41331804 - 41331756
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    ||||||||||||||||| |||||| ||||| |||||| |||||||||||    
T  41331804 taactcatttaactattgatttaaggatttggtgtaccaatacactcaa 41331756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43750150 - 43750075
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| |||||||||||||||||   ||||  |||||| |||||||||||  ||||| |||||||||||||||||||    
T  43750150 taacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 43750075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 31482444 - 31482378
Alignment:
Q  6 catttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatt 70  Q
    |||||||||||||||| || ||||| |||||| |||||||||||   |||| |||||||||||||||    
T  31482444 catttaactattaattcaatgatttggtgtaccaatacactcaaatatttgagtgtaccatagaatt 31482378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 45458761 - 45458695
Alignment:
Q  13 ctattaatttaaagattttgtgtactaatacactcaattt--tgggtgtaccatagaatttgcccta 77  Q
    |||||||||||| ||||| |||||| |||||||| || ||  |||||||| ||||||||||||||||    
T  45458761 ctattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaacatagaatttgcccta 45458695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 41968753 - 41968829
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||| ||||||||||||| |  ||||||  |||||||||   || || ||||||||||||||||||||    
T  41968753 taactcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattaggtgtaccatagaatttgcc 41968829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 44964158 - 44964227
Alignment:
Q  7 atttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||| |||||  ||||| |||||||||||   ||| ||||||||||| ||||||||    
T  44964158 atttaactattaatttaatgatttgttgtaccaatacactcaaatctttaggtgtaccatataatttgcc 44964227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 30891353 - 30891278
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    |||||||||||| ||||||||||||| |  |||||| | ||||||||   || |||| ||||||||||||||||||    
T  30891353 aactcatttaaccattaatttaaagagtgagtgtaccagtacactcaaatatattggatgtaccatagaatttgcc 30891278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 41809272 - 41809204
Alignment:
Q  6 catttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttg 72  Q
    |||||||||| |||||||| ||||| |||||| |||||||||  ||||||  ||||||| |||||||||    
T  41809272 catttaactactaatttaatgatttggtgtaccaatacactcaaaatttttagtgtaccgtagaatttg 41809204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 47748133 - 47748205
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 71  Q
    |||||||||||||||||||||||| || || || ||| |||||| ||||  |||| ||||||||||| |||||    
T  47748133 taactcatttaactattaatttaaggacttggtataccaatacattcaaatttttaggtgtaccataaaattt 47748205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8770696 - 8770770
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaat--tttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||| ||||| |||||| |||||| | |||  |||| ||||| |||||||||||||    
T  8770696 taacacatttaactattaatttaatgatttggtgtaccaatacagttaattctttgtgtgta-catagaatttgcc 8770770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42711006 - 42710931
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||  |||| |||||| ||| |||| ||  | || | ||||||||||||||||||    
T  42711006 taactcatttaactattaatttaagaatttggtgtaccaatgcacttaaattattagatgtaccatagaatttgcc 42710931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 21605723 - 21605650
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 72  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||  | |||||||||||||||||||||    
T  21605723 taactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttg 21605650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 6560901 - 6560828
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 72  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||||||||||||||||||||    
T  6560901 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaatttg 6560828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1662025 - 1662100
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||||  | ||||||||||||||||| |||||    
T  1662025 taacccatttaactattaatttaaggattttgtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 1662100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 34302721 - 34302646
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| |||||  ||||| |||||||||||  | |||||||||||||||||||||||    
T  34302721 taactcatttaactattaatttaaggatttgatgtaccaatacactcaaattattgggtgtaccatagaatttgcc 34302646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43237684 - 43237759
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||||||  | |||||||||||||||||||||||    
T  43237684 taactcatttaactattaatttaagaatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgcc 43237759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6114105 - 6114180
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| ||| || |||||||||||  | |||| ||||||||||||||||||    
T  6114105 taactcatttaactattaatttaaggatttggtggaccaatacactcaaattgttggatgtaccatagaatttgcc 6114180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6532654 - 6532579
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||| ||  | |||||||||||||||||||||||    
T  6532654 taactcatttaactattaatttaagaatttggtgtaccaatacacttaaattgttgggtgtaccatagaatttgcc 6532579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42917192 - 42917117
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||||||  | ||||||| |||||||||||||||    
T  42917192 taactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgcaccatagaatttgcc 42917117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3056460 - 3056386
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgc 73  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||| ||  | ||||||||||||||||| ||||    
T  3056460 taactcatttaactattaatttaaaaatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgc 3056386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 9589278 - 9589209
Alignment:
Q  7 atttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||| ||||| |||| | |||||||||| || ||||||||||||||||||||||||    
T  9589278 atttaactattaatttaatgatttggtgtgccaatacactcatatctttgggtgtaccatagaatttgcc 9589209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 13090989 - 13090917
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaattt 71  Q
    |||| |||||||||||||||||||  |||| |||||| |||||||||| || |||||||||||||||||||||    
T  13090989 taacacatttaactattaatttaataatttggtgtaccaatacactcatatctttgggtgtaccatagaattt 13090917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14967307 - 14967235
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaattt 71  Q
    |||| |||||||||| |||||||| ||||| |||||| |||||||||| || |||||||||||||||||||||    
T  14967307 taacacatttaactactaatttaatgatttagtgtaccaatacactcatatctttgggtgtaccatagaattt 14967235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 35162425 - 35162351
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||| ||||||||||||||||| |||||| | |||||| ||  |||||||||||||||| | ||||||    
T  35162425 aactcatttaattattaatttaaagatttggtgtaccagtacacttaaatttttgggtgtaccataaagtttgcc 35162351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 4618049 - 4618118
Alignment:
Q  7 atttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||  ||||| |||||| |||||||||||  |||| ||||||||||| ||||||||    
T  4618049 atttaactattaatttattgatttggtgtaccaatacactcaaatttttaggtgtaccataaaatttgcc 4618118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 18228790 - 18228859
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaa 68  Q
    |||||||||||||||||||||||| ||||| || ||| |||||||||||  | || ||||||||||||||    
T  18228790 taactcatttaactattaatttaaggatttggtataccaatacactcaaattgttaggtgtaccatagaa 18228859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28332196 - 28332120
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa---ttttgggtgtaccatagaatttgcc 74  Q
    |||| |||||||||||||||||   ||||| |||||| |||||||||||   ||||| |||||||||||||||||||    
T  28332196 taacacatttaactattaatttgttgatttggtgtaccaatacactcaaattttttgagtgtaccatagaatttgcc 28332120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2029428 - 2029383
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacact 46  Q
    |||||||||||||||||||||||| ||||| |||||| ||||||||    
T  2029428 taactcatttaactattaatttaaggatttggtgtaccaatacact 2029383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 13410617 - 13410545
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 71  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||||||  | |||| ||||||||| |||||    
T  13410617 taactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttggatgtaccataaaattt 13410545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 29959954 - 29959879
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    |||||||||||| ||||||||||||| |  ||||||| |||||||||   || || ||||||||||||||||||||    
T  29959954 aactcatttaaccattaatttaaagagtgagtgtactgatacactcaaatatattaggtgtaccatagaatttgcc 29959879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2141317 - 2141269
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||||||    
T  2141317 taactcatttaactattaatttaagaatttggtgtaccaatacactcaa 2141269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2414002 - 2413954
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||||||    
T  2414002 taactcatttaactattaatttaagaatttggtgtaccaatacactcaa 2413954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9534945 - 9534897
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||||||    
T  9534945 taactcatttaactattaatttaagaatttggtgtaccaatacactcaa 9534897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 12362694 - 12362764
Alignment:
Q  6 catttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||  ||||  |||||| |||||||| ||  ||||| |||||||||||||||||||    
T  12362694 catttaactattaatttattgattgggtgtaccaatacacttaaatttttgagtgtaccatagaatttgcc 12362764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 24097946 - 24097873
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttg 72  Q
    ||||||||| ||||||||||||||  |||| |||||| | ||||||||| |  |||||| ||||||||||||||    
T  24097946 taactcattgaactattaatttaataatttggtgtaccattacactcaaatgattgggtttaccatagaatttg 24097873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 35817679 - 35817744
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccat 64  Q
    |||||||||||||||||||||||||  ||| |||||  |||||||||||  |||||| ||||||||    
T  35817679 taactcatttaactattaatttaaaattttggtgtatcaatacactcaaatttttggatgtaccat 35817744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 41802175 - 41802106
Alignment:
Q  7 atttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||| ||||| |||||| |||||||||  |  |||||||||||| || ||||||||    
T  41802175 atttaactattaatttaatgatttggtgtaccaatacactcgaacctttgggtgtaccgtaaaatttgcc 41802106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27116537 - 27116465
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 71  Q
    |||| |||||||||||||||||   ||||  |||||| |||||||||||  |||||||||||||||| |||||    
T  27116537 taacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgggtgtaccataaaattt 27116465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35682172 - 35682119
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaattttg 54  Q
    ||||||||||||| |||||||||| ||| | |||||| ||||||||||| ||||    
T  35682172 taactcatttaacaattaatttaaggatatggtgtaccaatacactcaaatttg 35682119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 36339178 - 36339253
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaatt---ttgggtgtaccatagaatttgcc 74  Q
    |||||||||||| ||||||||||||| |  ||||||   ||||||||| |   |||||||||||||||||||||||    
T  36339178 aactcatttaaccattaatttaaagaatgagtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 36339253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 38293698 - 38293623
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||||| |  ||||| | | |||||||   || |||| ||||||||||||||||||    
T  38293698 aactcatttaactattaatttaaagagtgagtgtattgacacactcaaatatattggatgtaccatagaatttgcc 38293623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21051635 - 21051710
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||  ||||| |||||| |||||| ||||   ||| | ||||||||||||||||||    
T  21051635 taacacatttaactattaatttattgatttggtgtaccaatacattcaaatctttagatgtaccatagaatttgcc 21051710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 36752545 - 36752589
Alignment:
Q  5 tcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    |||||||||||||||||||| |||||||| ||| | |||||||||    
T  36752545 tcatttaactattaatttaaggattttgtataccactacactcaa 36752589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29347591 - 29347663
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 71  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||  | ||||||||||||||||||||    
T  29347591 taactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 29347663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11140322 - 11140247
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||||||||||||||||||||||    
T  11140322 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgcc 11140247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42067654 - 42067579
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||||||||||||||||||||||    
T  42067654 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 42067579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 44670589 - 44670664
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||  | ||||||||||| |||||||||||    
T  44670589 taactcatttaactattaatttaaggattttgtgtaccaatacactcaaattgttgggtgtaccttagaatttgcc 44670664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29786928 - 29787003
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||||||  | |||||||||||||||||||||||    
T  29786928 taactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 29787003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38785413 - 38785488
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||||||||||||| ||||||||    
T  38785413 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatataatttgcc 38785488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42364258 - 42364333
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||| |||||||||||||||||| ||||| |||||| |||||||||||  | |||||||||||||||||||||||    
T  42364258 taacttatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgcc 42364333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 876553 - 876628
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||| ||  | |||||||||||||| ||||||||    
T  876553 taactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatataatttgcc 876628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27082677 - 27082752
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||| ||||||||||||| |||||    
T  27082677 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaacttgcc 27082752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 31308952 - 31308877
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||| | |||||||||||  | || ||||||||||||||||||||    
T  31308952 taactcatttaactattaatttaaggatttggtgttccaatacactcaaattgttaggtgtaccatagaatttgcc 31308877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35171524 - 35171599
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| | ||| |||||| |||||||||||  | ||||||||||||||||| |||||    
T  35171524 taactcatttaactattaatttaagggtttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 35171599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 45636164 - 45636089
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||| |||  |||||| |||||||||||  | ||||||||||| |||||||||||    
T  45636164 taactcatttaactattaatttaaaaattcggtgtaccaatacactcaaattgttgggtgtaccctagaatttgcc 45636089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 27079711 - 27079785
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||| ||||||||||||| |||||    
T  27079711 aactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaacttgcc 27079785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 26885303 - 26885378
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||||| || ||||||  |||||||||   || |||||||||||||| ||||||||    
T  26885303 aactcatttaactattaatttaaagaattggtgtaccgatacactcaaatatattgggtgtaccataaaatttgcc 26885378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 39630221 - 39630297
Alignment:
Q  1 taactcatttaactatt-aatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||| |||||||| |||  ||||||||||||||||||  | |||| ||||||||||||||||||    
T  39630221 taactcatttaactatttaatttaaaaattcggtgtactaatacactcaaattgttggatgtaccatagaatttgcc 39630297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40650142 - 40650094
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||    
T  40650142 taactcatttaactattaatttaaggatttggtgtaccaatacactcaa 40650094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 44365696 - 44365621
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||| ||  | ||||||||| |||||||||||||    
T  44365696 taactcatttaactattaatttaagaatttggtgtaccaatacacttaaattgttgggtgtatcatagaatttgcc 44365621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42848537 - 42848614
Alignment:
Q  1 taactcatttaactattaatttaaagattt--tgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| |||||  |||| || |||||||||||  | ||||||||||||||||| |||||    
T  42848537 taactcatttaactattaatttaaggatttggtgtgcaccaatacactcaaattgttgggtgtaccatagaacttgcc 42848614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 42622685 - 42622609
Alignment:
Q  2 aactcatttaact-attaatttaaagattttgtgtactaatacactcaatttt---gggtgtaccatagaatttgcc 74  Q
    ||||||||||| | |||||||||| ||||| |||||||  |||||||||||||   |||||||||||||||||||||    
T  42622685 aactcatttaatttattaatttaacgatttggtgtactggtacactcaatttttttgggtgtaccatagaatttgcc 42622609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 9506978 - 9506903
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||||| || ||||||  || ||||||   || ||||||||| |||||||||||||    
T  9506978 aactcatttaactattaatttaaagaattggtgtaccgatgcactcaaatatattgggtgtatcatagaatttgcc 9506903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 9514953 - 9514878
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||||| || ||||||  || ||||||   || ||||||||| |||||||||||||    
T  9514953 aactcatttaactattaatttaaagaattggtgtaccgatgcactcaaatatattgggtgtatcatagaatttgcc 9514878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 26457287 - 26457362
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||||| | ||||||||| ||||||||   || |||| |||||| |||||||||||    
T  26457287 aacttatttaactattaatttaaagagtgtgtgtactagtacactcaaatatattggatgtaccgtagaatttgcc 26457362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 47948726 - 47948802
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccc 75  Q
    |||||||||||||||||||||||| ||||| |||||| ||| |||| ||  | ||||||||| ||||||| ||||||    
T  47948726 taactcatttaactattaatttaaggatttggtgtaccaatgcacttaaattgttgggtgtatcatagaacttgccc 47948802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4663469 - 4663544
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||  |||||  ||||| |||||||||  ||||||| ||||||||||||| |||||    
T  4663469 taacacatttaactattaatttattgatttgatgtaccaatacactcaaaattttgagtgtaccatagaacttgcc 4663544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27647553 - 27647478
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| |||||||||||||||||   ||||  |||||| |||||||||||  ||||| |||||||||||||||||||    
T  27647553 taacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 27647478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 28718259 - 28718334
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccc 75  Q
    |||| |||||| ||||||||||||| ||| ||| ||   |||||||||  ||||||||||||||||||||||||||    
T  28718259 aactaatttaattattaatttaaaggtttggtgcaccggtacactcaaaattttgggtgtaccatagaatttgccc 28718334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29491739 - 29491663
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaatt---ttgggtgtaccatagaatttgcc 74  Q
    ||||| ||||||||||||||||||||| |  ||||||   ||||||||| |   |||||||||||||||||||||||    
T  29491739 taacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 29491663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 32717723 - 32717662
Alignment:
Q  6 catttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccata 65  Q
    ||||||||||||||||||  ||||| ||||| ||||||||||||  |||| |||||||||||    
T  32717723 catttaactattaatttattgatttagtgtattaatacactcaaattttttggtgtaccata 32717662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 34593762 - 34593720
Alignment:
Q  7 atttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    |||||||||||||||||||||||| |||||  |||||||||||    
T  34593762 atttaactattaatttaaagatttggtgtaacaatacactcaa 34593720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 44522099 - 44522023
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaatt---ttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||||| |   ||||| ||||||||||| |   |||  ||||||||||||||||||    
T  44522099 taactcatttaactattaatttaaagagtgaatgtaccaatacactcaaatatattgaatgtaccatagaatttgcc 44522023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7671878 - 7671806
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 71  Q
    |||| |||||||||||||||||    |||  |||||| |||||||||||  ||||||||||||||||||||||    
T  7671878 taacacatttaactattaatttgtttattgggtgtaccaatacactcaaatttttgggtgtaccatagaattt 7671806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 40021154 - 40021079
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||||| |   ||||| | ||||||||   || |||| ||||||||||||||||||    
T  40021154 aactcatttaactattaatttaaagagtggatgtaccagtacactcaaatatattggatgtaccatagaatttgcc 40021079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 43715086 - 43715154
Alignment:
Q  8 tttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||| ||||  ||||| |||||| ||||||| |||  |||||| ||||||||||||||||||    
T  43715086 tttaactattagtttattgatttggtgtaccaatacacccaaatttttggatgtaccatagaatttgcc 43715154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 47470497 - 47470456
Alignment:
Q  7 atttaactattaatttaaagattttgtgtactaatacactca 48  Q
    |||| ||||||||||||| ||||| |||||||||||||||||    
T  47470497 atttgactattaatttaaggatttggtgtactaatacactca 47470456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19547564 - 19547489
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| |||||||||||||||||   ||||  ||||||  ||||||||||  |||||| ||||||||||||||||||    
T  19547564 taacacatttaactattaatttgttgattgggtgtaccgatacactcaaatttttggatgtaccatagaatttgcc 19547489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21289144 - 21289219
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| |||||||||||||||||   ||||  ||||||  ||||||||||  ||||| |||||||||||||||||||    
T  21289144 taacacatttaactattaatttgttgattgggtgtacctatacactcaaatttttgagtgtaccatagaatttgcc 21289219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25592337 - 25592412
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| |||| |||||||||||||  ||||| |||||  |||||||||||  |||||| ||||||||| ||||||||    
T  25592337 taacacattaaactattaatttattgatttggtgtatcaatacactcaaatttttggatgtaccatataatttgcc 25592412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 31479630 - 31479559
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 71  Q
    ||||||||||| |||||||||||  |||| ||||||  ||||||||||  |||| ||||||||||| |||||    
T  31479630 aactcatttaattattaatttaacaatttggtgtaccgatacactcaaatttttaggtgtaccatataattt 31479559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40473910 - 40473862
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    ||||| ||||||||||||||||||||| | ||||||||  |||||||||    
T  40473910 taacttatttaactattaatttaaagagtatgtgtactggtacactcaa 40473862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 40477833 - 40477759
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttg 72  Q
    ||||| ||||||||||||||||||||| |  ||||||   ||||||||   || |||||||||||||||||||||    
T  40477833 taacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttg 40477759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 7e-19; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37511163 - 37511088
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||  | ||||||||||||| |||||||||    
T  37511163 taactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatcgaatttgcc 37511088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 946051 - 945976
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||| |  |||| |||||| |||||||||||    
T  946051 taactcatttaactattaatttaaagatttggtgtaccaatacactcaaatggttggatgtaccgtagaatttgcc 945976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2273085 - 2273009
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgccc 75  Q
    |||| ||||||||||||||||||| ||||| |||||| |||||||||| || |||||||||||||||||||||||||    
T  2273085 taacacatttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgccc 2273009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14498634 - 14498709
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||||||||||||||||| |||||    
T  14498634 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 14498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 19718682 - 19718757
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||| ||||||||||| ||||| ||||||||||||||||||  |||||| ||||||||||||||||||    
T  19718682 taacacatttaattattaatttaatgatttggtgtactaatacactcaaatttttggatgtaccatagaatttgcc 19718757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28090267 - 28090192
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||| ||||||  | |||||||||||||||||||||||    
T  28090267 taactcatttaactattaatttaaggatttggtgtaccaatatactcaaattattgggtgtaccatagaatttgcc 28090192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 29773516 - 29773445
Alignment:
Q  5 tcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||| ||||| |||||| |||||||||||  | |||||||||||||||||||||||    
T  29773516 tcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 29773445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36002431 - 36002356
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||  | |||| |||||||||||| |||||    
T  36002431 taactcatttaactattaatttaaggatttggtgtactaatacactcaaattgttggatgtaccatagaacttgcc 36002356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10280635 - 10280587
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||    
T  10280635 taactcatttaactattaatttaaagatttggtgtaccaatacactcaa 10280587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15726221 - 15726296
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||| |||||||||||||||||| ||||| |||||| |||||||||||  | |||| ||||||||||||||||||    
T  15726221 taacttatttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgcc 15726296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 23286640 - 23286565
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| ||||||| |||  | || ||||||||||||||||||||    
T  23286640 taactcatttaactattaatttaaggatttggtgtaccaatacacgcaaattgttaggtgtaccatagaatttgcc 23286565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29229508 - 29229583
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 74  Q
    ||||||| ||||||||||||||||  |||| |||||| ||||||||||| |  |||||||||||||||||||||||    
T  29229508 taactcacttaactattaatttaagaatttggtgtaccaatacactcaaatggttgggtgtaccatagaatttgcc 29229583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38502259 - 38502184
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||| ||  | ||||||||||||||||| |||||    
T  38502259 taactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 38502184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17642149 - 17642074
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||| ||||| |||||| |||||||||| || ||||| ||||||||||||||||||    
T  17642149 taacacatttaactattaatttaatgatttggtgtaccaatacactcatatctttggatgtaccatagaatttgcc 17642074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 44934974 - 44934901
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 72  Q
    |||||||||||||||||||||||| |||||  ||||| |||||| ||||  | |||||||||||||||||||||    
T  44934974 taactcatttaactattaatttaaggatttgatgtaccaatacattcaaattgttgggtgtaccatagaatttg 44934901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 37465753 - 37465681
Alignment:
Q  7 atttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcccta 77  Q
    |||||||||||||||||  ||||| |||||| |||||||| ||  |||||| |||||||||||||||||||||    
T  37465753 atttaactattaatttattgatttggtgtaccaatacacttaaatttttggatgtaccatagaatttgcccta 37465681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 16323634 - 16323559
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||  ||||| |||||| |||||||||||   |||||||||| |||||||||||||    
T  16323634 taacacatttaactattaatttattgatttggtgtaccaatacactcaaatctttgggtgtatcatagaatttgcc 16323559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 34332187 - 34332112
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||  |||| |||||| ||| |||| ||  | |||||||||||||||||||||||    
T  34332187 taactcatttaactattaatttaagaatttggtgtaccaatgcacttaaattattgggtgtaccatagaatttgcc 34332112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 42444554 - 42444624
Alignment:
Q  6 catttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||| ||||| |||||| |||||||||||   ||| | ||||||||||||||||||    
T  42444554 catttaactattaatttaatgatttggtgtaccaatacactcaaatctttagatgtaccatagaatttgcc 42444624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 1043134 - 1043060
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttg 72  Q
    ||||| ||||||||||||||||||||| |  ||||||  |||||||||   || |||||||||||||||||||||    
T  1043134 taacttatttaactattaatttaaagagtgggtgtaccgatacactcaaatatattgggtgtaccatagaatttg 1043060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 11110440 - 11110404
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtact 38  Q
    ||||||||||||||||||||||||||||| |||||||    
T  11110440 aactcatttaactattaatttaaagatttagtgtact 11110404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23274697 - 23274649
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    |||||| ||||||||||||||||||||||| ||| || |||||||||||    
T  23274697 taactcctttaactattaatttaaagatttggtgcaccaatacactcaa 23274649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37161579 - 37161504
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| |||||  |||||  ||||||||||  | ||||||||| ||||||| |||||    
T  37161579 taactcatttaactattaatttaaggatttgatgtacctatacactcaaattgttgggtgtagcatagaacttgcc 37161504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43049611 - 43049537
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| |||||||| |||||||||| ||||| |||||| |||||| ||||  |||||| ||||||||||||||||||    
T  43049611 taacacatttaac-attaatttaatgatttggtgtaccaatacattcaaatttttggatgtaccatagaatttgcc 43049537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43485372 - 43485447
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||  |||||  ||||| |||||||||  ||||||| |||||||||| ||||||||    
T  43485372 taacacatttaactattaatttattgatttgatgtaccaatacactcaaaattttgagtgtaccataaaatttgcc 43485447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 4475114 - 4475045
Alignment:
Q  7 atttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccc 75  Q
    ||||||||||||||||   ||||| |||||| |||||||||||  ||||||||| ||||||||||||||||    
T  4475114 atttaactattaatttgttgatttggtgtaccaatacactcaaatttttgggtg-accatagaatttgccc 4475045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 6800108 - 6800178
Alignment:
Q  6 catttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||| || ||||| |||||| |||||||||||   |||| |||||||||| ||||||||    
T  6800108 catttaactattaattcaatgatttggtgtaccaatacactcaaatctttgagtgtaccataaaatttgcc 6800178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 34633938 - 34633865
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttg 72  Q
    |||||||||||||||||||||||||| |  ||||||  |||||||||   || ||||||||| |||||||||||    
T  34633938 aactcatttaactattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtatcatagaatttg 34633865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29454540 - 29454616
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    ||||| ||||||||||||||||||||| |  ||||||   ||||||||   || |||||||||||||||||||||||    
T  29454540 taacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 29454616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 40776950 - 40777022
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaa---ttttgggtgtaccatagaattt 71  Q
    |||| ||||||||||||||||||| | |   ||||| |||||||||||   ||||||||||||||||||||||    
T  40776950 aacttatttaactattaatttaaaaagtgaatgtacgaatacactcaaatattttgggtgtaccatagaattt 40777022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 529342 - 529267
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||  || || |||||| ||||||| |||  ||||  |||||||||||||||||||    
T  529342 taacacatttaactattaatttattgacttggtgtaccaatacacccaaattttttagtgtaccatagaatttgcc 529267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 39347461 - 39347536
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||  |||||  ||||| |||||||||||  |||| | ||||||||| ||||||||    
T  39347461 taacacatttaactattaatttattgatttaatgtaccaatacactcaaattttttgatgtaccataaaatttgcc 39347536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 7e-19; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6884234 - 6884155
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccctaa 78  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||||||||||||||||||||| |||||    
T  6884234 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgtcctaa 6884155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 34665646 - 34665573
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 72  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||||| ||||||||||||||    
T  34665646 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtataccatagaatttg 34665573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 11813528 - 11813600
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 71  Q
    |||| ||||||||||||||||||| ||||| |||||| |||||||||||  | ||||||||||||||||||||    
T  11813528 taacacatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 11813600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 58995 - 58920
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| |||||  ||||| |||||||||||  | |||||||||||||||| ||||||    
T  58995 taactcatttaactattaatttaaggatttgatgtaccaatacactcaaattattgggtgtaccatagattttgcc 58920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4673933 - 4674008
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||||||  | |||| ||||||||||||||||||    
T  4673933 taactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgcc 4674008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5092072 - 5091997
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | || | ||||||||||||||||||    
T  5092072 taactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttagatgtaccatagaatttgcc 5091997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11227702 - 11227627
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||| |||||||||||||||||| ||||| |||||| |||||||||||  | |||| ||||||||||||||||||    
T  11227702 taacttatttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgcc 11227627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14533153 - 14533228
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||| | ||  | |||||||||||||||||||||||    
T  14533153 taactcatttaactattaatttaaggatttggtgtaccaatacatttaaattgttgggtgtaccatagaatttgcc 14533228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12547439 - 12547364
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||| ||||| |||||  |||||||||| || ||||||||||||||||||||||||    
T  12547439 taacacatttaactattaatttaatgatttggtgtatcaatacactcatatctttgggtgtaccatagaatttgcc 12547364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 3383520 - 3383593
Alignment:
Q  3 actcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||| |  |||| ||||||||| ||||||||    
T  3383520 actcatttaactattaatttaaggatttggtgtaccaatacactcaaatggttggatgtaccataaaatttgcc 3383593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 5389532 - 5389605
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaattt--tgggtgtaccatagaatttg 72  Q
    ||||||||||||||||||||||||  |||| |||||| ||||||||||| ||  ||| ||||||||||||||||    
T  5389532 taactcatttaactattaatttaagtatttggtgtaccaatacactcaaattggtggatgtaccatagaatttg 5389605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6438506 - 6438580
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaat-tttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||| ||||| |||||| ||||||||  || |||| |||||||||||||||||||    
T  6438506 taacacatttaactattaatttaatgatttggtgtaccaatacactatatctttgagtgtaccatagaatttgcc 6438580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6513595 - 6513670
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||  ||||| |||||| |||||||||||   ||| ||||||||||||||||||||    
T  6513595 taacacatttaactattaatttattgatttagtgtaccaatacactcaaatctttaggtgtaccatagaatttgcc 6513670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42427902 - 42427977
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||| |||||||||||||||||| ||||| |||||| |||||||| ||  | ||||||||||||||||| |||||    
T  42427902 taacttatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 42427977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 36489428 - 36489360
Alignment:
Q  6 catttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 72  Q
    ||||||||||||||||||  ||||| |||||| |||||||||||   ||||||||||| ||||||||||    
T  36489428 catttaactattaatttattgatttagtgtaccaatacactcaaatctttgggtgtacaatagaatttg 36489360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1353580 - 1353507
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca-att-ttgggtgtaccatagaatttgcc 74  Q
    |||| |||||||||||  |||||| ||||| |||||| |||||||||| ||| |||||||||||||||||||||||    
T  1353580 taacccatttaactat--atttaaggatttggtgtaccaatacactcatattattgggtgtaccatagaatttgcc 1353507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37909454 - 37909379
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| |||||||||||||||||   ||||  ||||||||||||||||||  ||||| |||||| ||||||||||||    
T  37909454 taacacatttaactattaatttgttgattgggtgtactaatacactcaaatttttgagtgtactatagaatttgcc 37909379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 1580572 - 1580649
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaatt---ttgggtgtaccatagaatttgccc 75  Q
    |||||||||||||| |||||||||||| |  ||||||   ||||||||| |   ||||||||||||||||||||||||    
T  1580572 taactcatttaactgttaatttaaagagtaagtgtaccggtacactcaaatatattgggtgtaccatagaatttgccc 1580649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 5420297 - 5420254
Alignment:
Q  6 catttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    ||||||||||||||||||| ||||| |||||| |||||||||||    
T  5420297 catttaactattaatttaatgatttggtgtaccaatacactcaa 5420254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 30980955 - 30980882
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttg 72  Q
    |||||||||||||||||||||||||| |   ||||| |||||||| |   || |||||||||||||||||||||    
T  30980955 aactcatttaactattaatttaaagagtgaatgtaccaatacactaaaatatattgggtgtaccatagaatttg 30980882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 42641183 - 42641257
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| |||||| ||||||||||||| ||| ||| ||   |||||||||  |||||||||||||||||||||||||    
T  42641183 aactaatttaattattaatttaaaggtttggtgcaccggtacactcaaaattttgggtgtaccatagaatttgcc 42641257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11598190 - 11598114
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa---ttttgggtgtaccatagaatttgcc 74  Q
    |||| |||||||||||||||||   ||||  |||||| |||||||||||   ||||| |||||||||||||||||||    
T  11598190 taacacatttaactattaatttgttgattgggtgtaccaatacactcaaattttttgagtgtaccatagaatttgcc 11598114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 14960031 - 14960085
Alignment:
Q  160 ttgtagggtatgcttcttgctggaacagactcatcagctgtaacattagagtggg 214  Q
    |||||||||||||||||||| ||||||||| ||||||| || ||| |||| ||||    
T  14960031 ttgtagggtatgcttcttgcgggaacagacacatcagcagtgacaatagaatggg 14960085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 39620266 - 39620190
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgccc 75  Q
    |||| ||||||||||||||||||||| |  ||||||  |||||||||   || |||||||||||||| |||||||||    
T  39620266 aacttatttaactattaatttaaagagtgggtgtaccgatacactcaaatatattgggtgtaccataaaatttgccc 39620190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37083283 - 37083238
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacact 46  Q
    ||||||||||||||||||||||||| |||  |||||| ||||||||    
T  37083283 taactcatttaactattaatttaaaaattcggtgtaccaatacact 37083238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 45157605 - 45157530
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaatt---ttgggtgtaccatagaatttgcc 74  Q
    |||||||||||| ||||||||||||| |  ||||||   ||||||||| |   |||||||||||||||||||||||    
T  45157605 aactcatttaaccattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 45157530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 8371903 - 8371970
Alignment:
Q  7 atttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 72  Q
    ||||||||||||||||||| |||| |||||  |||||||| ||  | |||| ||||||||||||||||    
T  8371903 atttaactattaatttaaaaatttggtgtatcaatacacttaaattattggatgtaccatagaatttg 8371970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15771641 - 15771716
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 74  Q
    ||||| ||| |||||||||||||| ||||  |||||| |||||||| || |  |||||||||| ||||||||||||    
T  15771641 taacttattgaactattaatttaatgattgggtgtaccaatacacttaaataattgggtgtactatagaatttgcc 15771716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 32499217 - 32499150
Alignment:
Q  9 ttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||  ||||| |||||  |||||||||||  | || ||||||||||||||||||||    
T  32499217 ttaactattaatttattgatttggtgtatcaatacactcaaattctttggtgtaccatagaatttgcc 32499150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34438517 - 34438592
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||  ||||| |||| | |||||||||||  | |||| ||||||||| ||||||||    
T  34438517 taacacatttaactattaatttattgatttggtgttccaatacactcaaattattggatgtaccataaaatttgcc 34438592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38963395 - 38963470
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||| |||||  ||||| |||||| ||||  | |||| ||||||||| ||||||||    
T  38963395 taacccatttaactattaatttaaggatttgatgtaccaatacattcaaattgttggatgtaccatacaatttgcc 38963470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 2258978 - 2258905
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 72  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||||||||||||||||||||    
T  2258978 taactcatttaactattaatttaaggatttagtgtaccaatacactcaaattgttgggtgtaccatagaatttg 2258905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6848585 - 6848510
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| |||||||| ||| ||| |||||||  | |||||||||||||||||||||||    
T  6848585 taactcatttaactattaatttaaggattttgtataccaatgcactcaaattgttgggtgtaccatagaatttgcc 6848510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8401747 - 8401822
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||| |  |||| ||||||||| ||||||||    
T  8401747 taactcatttaactattaatttaaagatttggtgtacgaatacactcaaatggttggatgtaccatataatttgcc 8401822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 24212985 - 24212912
Alignment:
Q  3 actcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||| |  |||| ||||||||||||||||||    
T  24212985 actcatttaactattaatttaaggatttagtgtaccaatacactcaaatggttggatgtaccatagaatttgcc 24212912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 24487618 - 24487683
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccat 64  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||  | |||||||||||||    
T  24487618 taactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccat 24487683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1096296 - 1096221
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacact--caattttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||||||||| |||||| |||||| |   ||| ||||||||||||||||| |||||    
T  1096296 taactcatttaactattaatttaaagatttagtgtaccaatacaataaaaatattgggtgtaccatagaacttgcc 1096221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13390460 - 13390385
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||| ||  | ||||||||||||||||| |||||    
T  13390460 taactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 13390385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 26358884 - 26358959
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| | ||| |||||| |||||||||||  | ||||||||||||||||| |||||    
T  26358884 taactcatttaactattaatttaagggtttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 26358959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 32834105 - 32834180
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    ||||||||| |||||||||||||| ||||| |||||| |||||||||||  | || ||||||||||||||||||||    
T  32834105 taactcattgaactattaatttaatgatttggtgtaccaatacactcaaattattaggtgtaccatagaatttgcc 32834180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11446811 - 11446736
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 74  Q
    |||| ||||||||||||||||||  ||||| |||||| |||||||||| || ||||||||||||||||||||||||    
T  11446811 taacacatttaactattaatttattgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 11446736  T

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Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 17545680 - 17545607
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 72  Q
    ||||| ||||||||||||||||||  |||| |||||| |||||||||||  | |||||||||||||||||||||    
T  17545680 taacttatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttg 17545607  T

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Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8549885 - 8549961
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||| ||||||||||||| |  ||||||  |||||||||   || |||||||||||||||||||||||    
T  8549885 taactcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 8549961  T

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Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 9661827 - 9661752
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||||| |  ||||||   ||||||||   || |||||||||||||||||||||||    
T  9661827 aactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 9661752  T

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Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4110626 - 4110551
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||| |||| | | ||  | ||||||||||||||||| |||||    
T  4110626 taactcatttaactattaatttaaggatttagtgtaccaatatatttaaattattgggtgtaccatagaacttgcc 4110551  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 9686851 - 9686776
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    ||||||||||||  |||||||||||| |  ||||||| |||||||||   || ||| |||||||||||||||||||    
T  9686851 aactcatttaaccgttaatttaaagagtgagtgtactgatacactcaaatatattgagtgtaccatagaatttgcc 9686776  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 16892978 - 16892903
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactcaa---ttttgggtgtaccatagaatttgcc 74  Q
    |||| |||||| ||||||||||||| ||| ||| ||   |||||||||   |||||||||||||||||||||||||    
T  16892978 aactaatttaattattaatttaaaggtttggtgcaccggtacactcaaaaattttgggtgtaccatagaatttgcc 16892903  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30020689 - 30020761
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 71  Q
    |||| ||||||||||||||||||  ||||| || ||  |||||||||||  |||||| |||||||||||||||    
T  30020689 taacacatttaactattaatttattgatttggtatatcaatacactcaaacttttggatgtaccatagaattt 30020761  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 4901284 - 4901328
Alignment:
Q  5 tcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    |||||||||||||||||||| |||||  ||||| |||||||||||    
T  4901284 tcatttaactattaatttaaggatttaatgtaccaatacactcaa 4901328  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36940 - 37015
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||||||||| ||||| |||||  |||||||||||  | ||| |||||||||||||||||||    
T  36940 taactcatttaactattaatttaaggatttggtgtatcaatacactcaaattgttgagtgtaccatagaatttgcc 37015  T

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Target: scaffold0625 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 6600 - 6669
Alignment:
Q  7 atttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 74  Q
    |||||||||||||||||  ||||| |||||| |||||||||||  |||| ||||||||||||||||||||    
T  6600 atttaactattaatttattgatttggtgtaccaatacactcaaattttttggtgtaccatagaatttgcc 6669  T

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Target: scaffold0432 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 3360 - 3438
Alignment:
Q  1 taactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgccct 76  Q
    ||||| ||||||||||||||||||||| |  |||||||  ||||||||   || |||||||||||||||||||||||||    
T  3360 taacttatttaactattaatttaaagagtaggtgtactggtacactcaaatatattgggtgtaccatagaatttgccct 3438  T

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Target: scaffold0060 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 45836 - 45761
Alignment:
Q  2 aactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 74  Q
    |||||| ||||||||||||||||||||||  ||||   |||||||||   ||||||| ||||||||||||||||||    
T  45836 aactcacttaactattaatttaaagatttgatgtatcgatacactcaaatattttggatgtaccatagaatttgcc 45761  T

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Target: scaffold0077 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 48081 - 48037
Alignment:
Q  5 tcatttaactattaatttaaagattttgtgtactaatacactcaa 49  Q
    |||||||||||||||||||| ||||| |||||| |||||||||||    
T  48081 tcatttaactattaatttaaggatttggtgtaccaatacactcaa 48037  T

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Target: scaffold0184 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 16916 - 16989
Alignment:
Q  4 ctcatttaactattaatttaaagattttgtgtactaatacactcaatt---ttgggtgtaccatagaatttgcc 74  Q
    |||||||||| ||||||||||||| |  ||||||  |||||||||| |   |||||||||||||||||||||||    
T  16916 ctcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 16989  T

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Target: scaffold0078 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 55928 - 55855
Alignment:
Q  4 ctcatttaactattaatttaaagattttgtgtactaatacactcaatt---ttgggtgtaccatagaatttgcc 74  Q
    |||||||||| ||||||||||||| |  ||||||  |||||||||| |   |||||||||||||||||||||||    
T  55928 ctcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 55855  T

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Target: scaffold0604 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 2090 - 2022
Alignment:
Q  6 catttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 72  Q
    |||||||||||||||||   ||||  |||||| |||||||||||  ||||| |||||||||||||||||    
T  2090 catttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttg 2022  T

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