View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21239_low_31 (Length: 292)
Name: NF21239_low_31
Description: NF21239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21239_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 15 - 282
Target Start/End: Complemental strand, 33653798 - 33653522
Alignment:
| Q |
15 |
aattttgtctaatgttaacctattcattctcttctcccccctataacaat---------aaggcacgacttctatcaacttggtttgactatttagatca |
105 |
Q |
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| T |
33653798 |
aattttgtctaatgttaacctattcattctcttctcccccctataacaatcattcataaaaggcacgacttctatcaacttggtttgactatttagacca |
33653699 |
T |
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| Q |
106 |
tctttcctaggagacatatctgtgagtaacactgaagtatctcatgtatccaataaaatattttttaaaagtttnnnnnnnntaattctaatacttctag |
205 |
Q |
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| T |
33653698 |
tctttcctaggagacatatctgtgtgtaacagtgaagtatctcatgtatccaataaaatattttttaaaagtttaaaaaaaataattctaatacttctag |
33653599 |
T |
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| Q |
206 |
ggtatgtatctgcggattatcggtatccgatatggatatttccccaattttggagtatccatacttcacaggttctg |
282 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| |
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| T |
33653598 |
ggtatgtatccgcggattatcggtatccgatatggatatttccccaattttggagtaaccagacttcataggttctg |
33653522 |
T |
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