View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21239_low_35 (Length: 255)
Name: NF21239_low_35
Description: NF21239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21239_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 1848709 - 1848955
Alignment:
| Q |
1 |
caaattgttcaatgatttccctcttgtcaaactgaattataaatcttcctcaactcacagtgctgcgtttagagttaaatctgcattggcatctggaggg |
100 |
Q |
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| T |
1848709 |
caaattgttcaatgatttccctcttgtcaaactgaattataaatcttcctcaactcacagtgctgcgtttagagttaaatctgcattggcatctggaggg |
1848808 |
T |
|
| Q |
101 |
ggtgacctactttcgtatcccaaaaacaccaatgatattatcattggcaaagatctcgttgttggtgctcaatctattctagtccaggaacaatctaatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
1848809 |
ggtgacctactttcgtatcccaaaaacaccaatgatattatcattggcaaagatctcgttgttggtactcaatctattctagtccaggaacaatctaatg |
1848908 |
T |
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| Q |
201 |
gaaccccgacatcagactcagggttaccaagcacttttttctctgct |
247 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
1848909 |
gaaccccgacatcagactcagggataccaagcacttttttctctgct |
1848955 |
T |
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