View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2123R-Insertion-4 (Length: 341)
Name: NF2123R-Insertion-4
Description: NF2123R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2123R-Insertion-4 |
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Alignment Details
Target: chr5 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 9 - 334
Target Start/End: Original strand, 4996116 - 4996454
Alignment:
| Q |
9 |
gctgcattagtggttggaaattgaaatagattagagtacataaattaaatgtcattttcctttctttagaatgcaccattccttattctcctaagcaaaa |
108 |
Q |
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| T |
4996116 |
gctgcattagtggttggaaattgaaatagattagagtacataaattaaatgtcattttcctttctttagaatgcaccattccttattctcctaagcaaaa |
4996215 |
T |
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| Q |
109 |
tattcttactgtagccacctat-------------tacaaaaatcacaaacaaagagacaataacatagtcaacatgttcatcaaatcatctccaaaatg |
195 |
Q |
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| T |
4996216 |
tattcttactgtagccacctatactatagctctattacaaaaatcacaaacaaagagacaataacatagtcaacatgttcatcaaatcatctccaaaatg |
4996315 |
T |
|
| Q |
196 |
tttcacatctctctctagtactatacaaatttcataggttgtccaaatttcttaaccttatcctatccccaagaatgattcttcttctggaagtaataat |
295 |
Q |
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| T |
4996316 |
tttcacatctctctctagtactatacaaatttcataggttgtccaaatttcttaaccttatcctatccccaagaatgattcttcttctggaagtaataat |
4996415 |
T |
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| Q |
296 |
gctttaccccttacactctacctttggctgtgtcttgtt |
334 |
Q |
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| T |
4996416 |
gctttaccccttacactctacctttggctgtgtcttgtt |
4996454 |
T |
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