View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2123R-Insertion-7 (Length: 185)
Name: NF2123R-Insertion-7
Description: NF2123R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2123R-Insertion-7 |
 | |
|
| [»] chr5 (1 HSPs) |
| |
|
Alignment Details
Target: chr5 (Bit Score: 164; Significance: 7e-88; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 8 - 185
Target Start/End: Complemental strand, 36570923 - 36570749
Alignment:
| Q |
8 |
aattttcatccccattagcatcatatcttaattaagatatttcaacaagtcatgtgcaacacactttaccacctcttattcttaagaaaatataaggtac |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36570923 |
aattttcatccccattagcatcatatcttaattaagatatttcaacaagtcatgtgcaacacactttaccacctcttattcttaagaaaatataaggtac |
36570824 |
T |
|
| Q |
108 |
atgttcatcatgatatagaactctatataataccaaattggagatgctcttaggattaggatgcatgctaaaagaggg |
185 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36570823 |
atgttcatcatgata---aactctatataataccaaattggagatgctcttaggattaggatgcatgctaaaagaggg |
36570749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University