View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21242_low_68 (Length: 319)

Name: NF21242_low_68
Description: NF21242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21242_low_68
NF21242_low_68
[»] chr7 (1 HSPs)
chr7 (10-301)||(26031523-26031813)


Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 10 - 301
Target Start/End: Original strand, 26031523 - 26031813
Alignment:
Q  10 gcagagagggacaagtgtcattcccaaatcaaccaacccaaataggatcaaagagaatgtggttgtcttcaattgggaacttccagataatgacttcaac 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26031523 gcagagagggacaagtgtcattcccaaatcaaccaacccaaataggatcaaagagaatgtggttgtcttcaattgggaacttccagataatgacttcaac 26031622  T
Q  110 aaacttagcaaaataccagatcaggtagctcacaagcatgggtcgaaatagtttccgatttgataaatagatctttaaaattgttaatttcatccaaaat 209  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26031623 aaacttagcaaaataccagatcaggtagctcacaagcattggtcgaaatag-ttccgatttgataaatagatctttaaaattgttaatttcatccaaaat 26031721  T
Q  210 ggtccatccgttgacttctactattggagctatgatgtggcacgttaacgggatatactacattgcatgttgatctcacattaaggtcatcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||| || |||||   |||| |||||||||||||| ||| ||| || | |||||||    
T  26031722 ggtccatccgttgacttctactattggagctatgacgtggaacattaaccaaatatgctacattgcatgttcatcccacgttgacgtcatcc 26031813  T

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