View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21242_low_83 (Length: 286)
Name: NF21242_low_83
Description: NF21242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21242_low_83 |
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Alignment Details
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 11 - 268
Target Start/End: Complemental strand, 39119613 - 39119356
Alignment:
| Q |
11 |
atcatcaaagcaatacactaatttcaattagatcaaattcaaaagaactaaaacatactaatcctactttttccatataaaccttgtaaaaaccctcacc |
110 |
Q |
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| T |
39119613 |
atcatcaaagcaatacactaatttcaattagatcaaattcaaaagaactaaaacatactaatcctactttttccatataaaccttgtaaaaaccctcacc |
39119514 |
T |
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| Q |
111 |
gaaaaccctaatcctctgacaaatcgaaattacagctataatcaatattctgattcaatcgtgtacaagctacaaagaatctggagcagcgagattttga |
210 |
Q |
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| T |
39119513 |
gaaaaccctaatcctctgacaaatcgaaattacagctataatcaatattctgattcgatcgtgtgcaagctacaaagaatctggagcagcaagattttta |
39119414 |
T |
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| Q |
211 |
gcaaaaccctcgcagtgcaacaattgacggttggaatttcggaggtagttgaaattga |
268 |
Q |
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| T |
39119413 |
gcaaaaccctcgcagtgcaacaattgacggttggaatttcggaggtagttgaaattga |
39119356 |
T |
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