View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21244_high_6 (Length: 239)
Name: NF21244_high_6
Description: NF21244
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21244_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 25810382 - 25810159
Alignment:
| Q |
1 |
ttagttcatggattaagtcaaatttgattaaaaa--tatgtgacataatgtttacttgctatgaatgaaaatatgatttattattaagtgaaaaactttc |
98 |
Q |
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| T |
25810382 |
ttagttcatggattaagtcaaatgtgattaaaaaaatatgtgacataatgtttacttgctatgaatgaaaatatgatttattattaagtgaaaaactttc |
25810283 |
T |
|
| Q |
99 |
caaacaacttcacttattattataaaaaacattgaacaccctgtcctctaatctctatatataaagctacaaaggttaatacatttgcatcattggtctc |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
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| T |
25810282 |
caaacaacttcacttattattataaaaaacattgaacaccctgttctctaatctctatatataaagcttcaaaggttaatacatttacatcattggtctc |
25810183 |
T |
|
| Q |
199 |
attgattcatacaaagtctagtat |
222 |
Q |
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|||||||||||||||||||||||| |
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| T |
25810182 |
attgattcatacaaagtctagtat |
25810159 |
T |
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