View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21244_low_1 (Length: 636)

Name: NF21244_low_1
Description: NF21244
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21244_low_1
NF21244_low_1
[»] chr7 (31 HSPs)
chr7 (11-618)||(38326624-38327234)
chr7 (232-294)||(27462428-27462490)
chr7 (232-295)||(19416520-19416583)
chr7 (240-295)||(10244733-10244788)
chr7 (232-295)||(16577852-16577915)
chr7 (232-295)||(16587747-16587810)
chr7 (232-291)||(19599155-19599214)
chr7 (232-295)||(40752831-40752894)
chr7 (238-295)||(18714454-18714511)
chr7 (254-307)||(21286344-21286397)
chr7 (247-295)||(44558781-44558829)
chr7 (232-295)||(21105609-21105672)
chr7 (232-295)||(31038514-31038577)
chr7 (232-291)||(41237916-41237975)
chr7 (250-309)||(41527552-41527611)
chr7 (232-295)||(46987092-46987155)
chr7 (232-295)||(47607902-47607965)
chr7 (233-295)||(5352335-5352397)
chr7 (232-306)||(5579688-5579762)
chr7 (233-291)||(19626518-19626576)
chr7 (232-294)||(27833393-27833455)
chr7 (233-295)||(46737791-46737853)
chr7 (257-306)||(3672569-3672618)
chr7 (250-295)||(8615029-8615074)
chr7 (234-295)||(43579047-43579108)
chr7 (232-295)||(2512312-2512378)
chr7 (232-295)||(20243261-20243325)
chr7 (252-308)||(25888893-25888949)
chr7 (235-295)||(38374186-38374246)
chr7 (247-295)||(42336076-42336124)
chr7 (242-294)||(45046217-45046269)
[»] chr4 (48 HSPs)
chr4 (232-295)||(56551584-56551647)
chr4 (233-295)||(47814244-47814306)
chr4 (232-295)||(2431003-2431066)
chr4 (236-295)||(10564461-10564520)
chr4 (232-295)||(11949755-11949818)
chr4 (232-299)||(22630352-22630419)
chr4 (232-291)||(43034334-43034393)
chr4 (232-306)||(28435240-28435314)
chr4 (230-295)||(42139850-42139915)
chr4 (239-295)||(20383494-20383550)
chr4 (232-295)||(3936633-3936696)
chr4 (232-295)||(7230286-7230349)
chr4 (232-295)||(9946433-9946496)
chr4 (232-295)||(16304090-16304153)
chr4 (232-306)||(6087742-6087816)
chr4 (239-295)||(675924-675980)
chr4 (235-295)||(16431622-16431682)
chr4 (232-288)||(49041973-49042029)
chr4 (232-295)||(836227-836290)
chr4 (232-306)||(2888868-2888943)
chr4 (232-295)||(5924655-5924718)
chr4 (232-295)||(11198334-11198397)
chr4 (232-295)||(19588160-19588223)
chr4 (247-306)||(19854560-19854619)
chr4 (232-291)||(19908702-19908761)
chr4 (240-295)||(20799394-20799449)
chr4 (232-295)||(23247590-23247653)
chr4 (232-295)||(23809955-23810018)
chr4 (232-295)||(24664983-24665046)
chr4 (232-291)||(24885792-24885851)
chr4 (232-291)||(32711790-32711849)
chr4 (232-295)||(35287499-35287562)
chr4 (232-295)||(43782297-43782360)
chr4 (252-295)||(51458684-51458727)
chr4 (232-295)||(54857607-54857670)
chr4 (232-295)||(10519141-10519208)
chr4 (232-306)||(19479469-19479543)
chr4 (240-306)||(22040645-22040711)
chr4 (254-295)||(2186347-2186388)
chr4 (234-295)||(14577501-14577562)
chr4 (253-306)||(34247435-34247488)
chr4 (238-291)||(40070966-40071019)
chr4 (254-295)||(52270044-52270085)
chr4 (239-295)||(897431-897487)
chr4 (255-295)||(21052572-21052612)
chr4 (242-294)||(23160047-23160099)
chr4 (247-295)||(46676505-46676553)
chr4 (254-306)||(49021761-49021813)
[»] chr2 (44 HSPs)
chr2 (232-295)||(22523004-22523067)
chr2 (234-295)||(7206131-7206192)
chr2 (232-295)||(35820293-35820356)
chr2 (232-291)||(27848167-27848227)
chr2 (238-306)||(29734686-29734754)
chr2 (232-295)||(10735823-10735886)
chr2 (232-295)||(22061293-22061356)
chr2 (232-295)||(24592838-24592901)
chr2 (232-295)||(25186234-25186297)
chr2 (232-295)||(29544633-29544696)
chr2 (232-291)||(34977214-34977273)
chr2 (232-295)||(44526134-44526197)
chr2 (233-295)||(8781643-8781705)
chr2 (232-306)||(41859847-41859921)
chr2 (234-295)||(41763872-41763933)
chr2 (255-295)||(9686463-9686503)
chr2 (239-295)||(20565074-20565130)
chr2 (239-295)||(43117189-43117245)
chr2 (232-291)||(2256981-2257040)
chr2 (232-295)||(20455897-20455960)
chr2 (232-295)||(30089055-30089118)
chr2 (232-295)||(30125659-30125722)
chr2 (232-291)||(31815879-31815938)
chr2 (232-295)||(42066718-42066781)
chr2 (232-295)||(44810711-44810774)
chr2 (233-295)||(19212964-19213026)
chr2 (253-295)||(25598575-25598617)
chr2 (232-294)||(41778936-41778998)
chr2 (234-295)||(4927443-4927504)
chr2 (232-293)||(11953954-11954014)
chr2 (233-278)||(42791318-42791363)
chr2 (255-291)||(231608-231644)
chr2 (232-288)||(660814-660870)
chr2 (242-306)||(8091160-8091224)
chr2 (255-295)||(9383224-9383264)
chr2 (255-295)||(10156023-10156063)
chr2 (247-295)||(12124551-12124599)
chr2 (232-304)||(20120713-20120785)
chr2 (247-295)||(21558813-21558861)
chr2 (239-295)||(22608533-22608589)
chr2 (247-295)||(24593382-24593430)
chr2 (239-295)||(31543018-31543074)
chr2 (230-290)||(37830724-37830784)
chr2 (239-295)||(43043164-43043220)
[»] scaffold0011 (2 HSPs)
scaffold0011 (232-306)||(7717-7791)
scaffold0011 (232-295)||(185269-185332)
[»] chr3 (46 HSPs)
chr3 (232-306)||(38130951-38131025)
chr3 (232-295)||(25340916-25340979)
chr3 (232-295)||(25441492-25441555)
chr3 (232-304)||(48849755-48849826)
chr3 (232-291)||(4601854-4601913)
chr3 (232-295)||(14827531-14827594)
chr3 (240-295)||(24428473-24428528)
chr3 (232-295)||(29631192-29631255)
chr3 (232-295)||(35863805-35863868)
chr3 (232-295)||(45431954-45432017)
chr3 (232-295)||(45885469-45885532)
chr3 (232-306)||(53996294-53996368)
chr3 (252-295)||(977953-977996)
chr3 (232-295)||(2662098-2662161)
chr3 (232-295)||(11358240-11358303)
chr3 (240-299)||(16663236-16663295)
chr3 (232-295)||(16792966-16793029)
chr3 (252-295)||(21914847-21914890)
chr3 (232-295)||(22722408-22722471)
chr3 (232-295)||(27185483-27185546)
chr3 (232-295)||(32843254-32843317)
chr3 (232-295)||(34899103-34899166)
chr3 (232-291)||(51882192-51882251)
chr3 (232-295)||(52119382-52119445)
chr3 (232-278)||(8075808-8075854)
chr3 (232-294)||(22799718-22799780)
chr3 (233-295)||(38034802-38034864)
chr3 (252-290)||(42398001-42398039)
chr3 (253-295)||(43345020-43345062)
chr3 (237-295)||(44579642-44579700)
chr3 (238-291)||(2186425-2186478)
chr3 (254-295)||(10498709-10498750)
chr3 (247-292)||(11969657-11969702)
chr3 (255-296)||(17507714-17507755)
chr3 (238-295)||(23147976-23148033)
chr3 (232-291)||(334839-334899)
chr3 (232-292)||(8136624-8136684)
chr3 (247-291)||(19468461-19468505)
chr3 (239-295)||(20400083-20400139)
chr3 (235-295)||(21506753-21506813)
chr3 (247-295)||(32629086-32629134)
chr3 (255-295)||(35392009-35392049)
chr3 (232-295)||(39100075-39100139)
chr3 (255-291)||(43011332-43011368)
chr3 (255-295)||(50570204-50570244)
chr3 (239-295)||(55126012-55126068)
[»] chr6 (26 HSPs)
chr6 (233-306)||(655742-655815)
chr6 (232-295)||(26400870-26400933)
chr6 (232-306)||(14296949-14297023)
chr6 (232-291)||(8569719-8569778)
chr6 (232-295)||(17151242-17151305)
chr6 (232-295)||(29740488-29740551)
chr6 (232-295)||(32053794-32053857)
chr6 (233-295)||(20744144-20744206)
chr6 (247-291)||(1918465-1918509)
chr6 (232-288)||(21598970-21599026)
chr6 (232-291)||(2726409-2726468)
chr6 (232-295)||(4455588-4455651)
chr6 (232-295)||(5040825-5040888)
chr6 (240-295)||(7081654-7081709)
chr6 (240-295)||(8637437-8637492)
chr6 (232-295)||(13376318-13376381)
chr6 (252-295)||(18254113-18254156)
chr6 (232-295)||(21847200-21847263)
chr6 (240-291)||(31971539-31971590)
chr6 (232-295)||(33824887-33824950)
chr6 (234-295)||(2473609-2473670)
chr6 (254-295)||(8810646-8810687)
chr6 (238-295)||(9392666-9392723)
chr6 (232-277)||(15187087-15187132)
chr6 (232-277)||(15473474-15473519)
chr6 (232-295)||(34828312-34828376)
[»] scaffold0180 (1 HSPs)
scaffold0180 (232-295)||(17738-17800)
[»] chr8 (35 HSPs)
chr8 (232-295)||(32051524-32051587)
chr8 (232-290)||(12800892-12800950)
chr8 (232-289)||(12748913-12748970)
chr8 (230-295)||(13286137-13286201)
chr8 (232-308)||(8717467-8717543)
chr8 (254-306)||(12910820-12910872)
chr8 (230-294)||(36781415-36781479)
chr8 (232-295)||(444419-444482)
chr8 (232-295)||(11708992-11709055)
chr8 (232-291)||(13357433-13357492)
chr8 (232-295)||(19163528-19163591)
chr8 (232-295)||(27587227-27587290)
chr8 (232-306)||(6235543-6235617)
chr8 (232-306)||(7996935-7997009)
chr8 (232-294)||(25136836-25136898)
chr8 (241-295)||(42208470-42208524)
chr8 (240-304)||(32421566-32421630)
chr8 (251-295)||(43962035-43962079)
chr8 (232-291)||(15001267-15001326)
chr8 (232-291)||(17898089-17898148)
chr8 (232-291)||(32944832-32944891)
chr8 (232-295)||(40679721-40679784)
chr8 (232-294)||(24838162-24838224)
chr8 (253-295)||(30427737-30427779)
chr8 (232-290)||(37141368-37141426)
chr8 (250-295)||(11771713-11771758)
chr8 (242-295)||(24195255-24195308)
chr8 (238-295)||(37938501-37938558)
chr8 (254-306)||(2554226-2554278)
chr8 (247-295)||(9656004-9656052)
chr8 (232-308)||(17704006-17704082)
chr8 (247-295)||(19778071-19778119)
chr8 (247-295)||(23852917-23852965)
chr8 (235-295)||(39821890-39821950)
chr8 (247-291)||(40795387-40795431)
[»] chr5 (34 HSPs)
chr5 (232-295)||(22522793-22522856)
chr5 (234-295)||(16133059-16133120)
chr5 (238-291)||(20721060-20721113)
chr5 (247-308)||(20927632-20927693)
chr5 (232-295)||(6489013-6489076)
chr5 (232-295)||(6624782-6624845)
chr5 (232-291)||(13864354-13864413)
chr5 (232-295)||(17090872-17090935)
chr5 (232-295)||(28207138-28207201)
chr5 (232-295)||(37932336-37932399)
chr5 (232-295)||(40715941-40716004)
chr5 (232-306)||(18331702-18331776)
chr5 (233-306)||(10704324-10704397)
chr5 (232-293)||(26655472-26655533)
chr5 (232-293)||(26927057-26927118)
chr5 (254-306)||(18489090-18489142)
chr5 (247-291)||(35109410-35109454)
chr5 (232-295)||(3445239-3445302)
chr5 (232-295)||(16036833-16036896)
chr5 (232-295)||(26409259-26409322)
chr5 (232-295)||(34436857-34436920)
chr5 (232-306)||(11720889-11720962)
chr5 (238-308)||(12189985-12190055)
chr5 (232-294)||(23036699-23036761)
chr5 (233-295)||(34191439-34191501)
chr5 (233-291)||(40837896-40837954)
chr5 (238-295)||(31602823-31602880)
chr5 (250-291)||(41650949-41650990)
chr5 (232-295)||(4009872-4009936)
chr5 (247-295)||(18391606-18391654)
chr5 (232-296)||(18789041-18789105)
chr5 (232-295)||(24636639-24636703)
chr5 (238-278)||(39938781-39938821)
chr5 (255-295)||(42505878-42505918)
[»] chr1 (40 HSPs)
chr1 (232-295)||(8269360-8269423)
chr1 (232-295)||(34521182-34521245)
chr1 (236-295)||(25532979-25533038)
chr1 (232-295)||(34632175-34632238)
chr1 (232-295)||(42045364-42045427)
chr1 (232-295)||(45139998-45140061)
chr1 (232-295)||(52441503-52441566)
chr1 (233-295)||(18166608-18166670)
chr1 (232-294)||(39302952-39303014)
chr1 (238-294)||(13615610-13615666)
chr1 (247-295)||(19620582-19620630)
chr1 (239-295)||(26803450-26803506)
chr1 (238-306)||(33153878-33153946)
chr1 (252-295)||(3509953-3509996)
chr1 (232-291)||(6000135-6000194)
chr1 (232-287)||(8736449-8736504)
chr1 (232-291)||(9265828-9265887)
chr1 (232-295)||(17139509-17139572)
chr1 (232-291)||(27172714-27172773)
chr1 (232-295)||(41884797-41884860)
chr1 (232-295)||(42888581-42888644)
chr1 (232-295)||(47528439-47528502)
chr1 (233-295)||(41763148-41763210)
chr1 (234-295)||(26755622-26755683)
chr1 (238-295)||(40680490-40680547)
chr1 (238-295)||(43611430-43611487)
chr1 (254-295)||(49183179-49183220)
chr1 (232-295)||(3481566-3481630)
chr1 (255-295)||(8253745-8253785)
chr1 (232-295)||(13094032-13094098)
chr1 (232-288)||(17651372-17651428)
chr1 (232-295)||(24752639-24752703)
chr1 (254-306)||(25086478-25086530)
chr1 (239-295)||(28016189-28016245)
chr1 (232-304)||(28832163-28832235)
chr1 (255-295)||(34142379-34142419)
chr1 (247-295)||(38448873-38448921)
chr1 (242-286)||(39252148-39252192)
chr1 (247-295)||(47961296-47961344)
chr1 (232-295)||(52494062-52494126)
[»] scaffold0735 (1 HSPs)
scaffold0735 (232-295)||(1534-1597)
[»] scaffold0118 (2 HSPs)
scaffold0118 (241-295)||(40004-40058)
scaffold0118 (247-291)||(45422-45466)
[»] scaffold0021 (1 HSPs)
scaffold0021 (232-306)||(161136-161210)
[»] scaffold0983 (1 HSPs)
scaffold0983 (233-294)||(3308-3369)
[»] scaffold0896 (1 HSPs)
scaffold0896 (254-295)||(3147-3188)
[»] scaffold0122 (1 HSPs)
scaffold0122 (257-306)||(31172-31221)
[»] scaffold0040 (2 HSPs)
scaffold0040 (238-295)||(58859-58916)
scaffold0040 (247-295)||(53784-53832)
[»] scaffold0026 (1 HSPs)
scaffold0026 (232-293)||(75333-75394)
[»] scaffold0005 (1 HSPs)
scaffold0005 (234-295)||(239813-239874)


Alignment Details
Target: chr7 (Bit Score: 476; Significance: 0; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 11 - 618
Target Start/End: Original strand, 38326624 - 38327234
Alignment:
Q  11 cacagaaccaagccgttactgattcgtcacaaaccgaattgcgagagatttggtgcactggttatgtagtttcaagctgaaccaaaattacctttacaaa 110  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38326624 cacagaaccaagccgttactgattcgtcacaaactgaattgcgagagatttggtgcattggttatgtagtttcaagctgaaccaaaattacctttacaaa 38326723  T
Q  111 aattggaatgtannnnnnngaatcgaactagtttttaagccgaattgtatcaaataactaagattgttgttgnnnnnnnntaaaatttgaaccaaatcga 210  Q
    ||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||    
T  38326724 aattggaatgtatttttttgaatcgaactggtttttaagccgaattgtatcaaataactaagattgttgttgaaaaaaaataaaatttgaaccaaatcga 38326823  T
Q  211 atattaggacannnnnnnn---gcggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaaggat 307  Q
    |||||||||             ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||| |||||||    
T  38326824 atattaggaactttttttttttgcggtggccggggtttcaacctcggaccttgcatgtattatgttttgtccataccaactgagctaaactcacaaggat 38326923  T
Q  308 aagtattaggacatttttaaacacaagggaaacatttcaaaggaatttaaacaagagagatttttgtatggacaaaatcaaaatttgttcattttactaa 407  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38326924 aaatattaggacatttttaaacacaagggaaacatttcaaaggaatttaaacaagagagatttttgtatggacaaaatcaaaatttgttcattttactaa 38327023  T
Q  408 gaccaaacaagtaatttcaggttttagagggataaacaaatcacagggaataaaacattggcaaaattttagggaccataaacataaatctaatctaatt 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38327024 gaccaaacaagtaatttcaggttttagagggataaacaaatcacagggaataaaacactggcaaaattttagggaccataaacataaatctaatctaatt 38327123  T
Q  508 cattataattgtcctcgttcgaataacttcatagccaaacaatgtttttgatgtttgtagttgcagtatctatgggcaaaatcataaggaagaggaagcc 607  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38327124 cattataattgtccttgttcgaataacttcatagccaaacaatgtgtttgatgtttgtagttgcagtatctatgggcaaaatcataaggaagaggaagcc 38327223  T
Q  608 attaaggaaga 618  Q
    |||||||||||    
T  38327224 attaaggaaga 38327234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 27462428 - 27462490
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 294  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| |||||||||||||||    
T  27462428 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagcta 27462490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 19416583 - 19416520
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| |||||||||||| | ||||| |||||| ||||||||||||||||    
T  19416583 ggtggccggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 19416520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 10244788 - 10244733
Alignment:
Q  240 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||| |||| |||||||||||| ||||||| |||||| ||||||||||||||||    
T  10244788 gggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 10244733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 16577852 - 16577915
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| ||||| |||| | |||||||||| ||||||||||||||  |||||||||||||||    
T  16577852 ggtggccgaggtttgaaccccagaccttgcatatattatgtattgtccctaccaactgagctaa 16577915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 16587810 - 16587747
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| ||||| |||| | |||||||||| ||||||||||||||  |||||||||||||||    
T  16587810 ggtggccgaggtttgaaccccagaccttgcatatattatgtattgtccctaccaactgagctaa 16587747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 19599214 - 19599155
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    ||||| |||||||| |||| |||||||||||| ||||||| |||||| ||||||||||||    
T  19599214 ggtggtcggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgag 19599155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 40752831 - 40752894
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||  |||| ||||| |||||| |||||||||||||| |||| |||||||||||    
T  40752831 ggtggccggggttcgaaccccggacattgcatatattatgtattgtccatactaactgagctaa 40752894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 18714511 - 18714454
Alignment:
Q  238 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  18714511 cggggtttgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 18714454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 21286397 - 21286344
Alignment:
Q  254 gaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaaggat 307  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||| |||||||    
T  21286397 gaccttgcatatattatgtattgtccataccaattgagctaagctctcaaggat 21286344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 44558781 - 44558829
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||| |||||||||| ||||||| |||||| ||||||||||||||||    
T  44558781 aacctcagaccttgcatatattatgcattgtccataccaactgagctaa 44558829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 21105672 - 21105609
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| |||||||  ||||||| ||||||||| ||||||| ||| || ||||||||||||||||    
T  21105672 ggtggtcggggttcgaacctcgaaccttgcatatattatgcattttccataccaactgagctaa 21105609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 31038514 - 31038577
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| | ||||||||||  | |||| |||||| ||||||||||||||||    
T  31038514 ggtggccggggtttgaaccccagaccttgcatacaatatgcattgtccataccaactgagctaa 31038577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 41237916 - 41237975
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    ||||| || ||||| ||||||| ||||||||| ||||| |||||||| ||||||||||||    
T  41237916 ggtggtcgaggtttgaacctcgaaccttgcatatattacgtattgtccataccaactgag 41237975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 41527611 - 41527552
Alignment:
Q  250 ctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaaggataa 309  Q
    |||||||||||||| ||||||| |||||| ||||||||| |||||| ||| | |||||||    
T  41527611 ctcggaccttgcatatattatgcattgtccataccaactaagctaagctcacgaggataa 41527552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 46987155 - 46987092
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| ||||||||  |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  46987155 ggtgtccggggttcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 46987092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 47607902 - 47607965
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||| |||| ||||  ||||||||||| ||||||||| ||||  |||||||||||||||    
T  47607902 ggtggccggagtttgaaccctggaccttgcatatattatgtaatgtccctaccaactgagctaa 47607965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 5352397 - 5352335
Alignment:
Q  233 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||| ||  || ||||||||||| || ||||||||||||||  |||||||||||||||    
T  5352397 gtggccgggattcgaatctcggaccttgtatatattatgtattgtccttaccaactgagctaa 5352335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 5579762 - 5579688
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    ||||| |||||||| |||| | |||||||||| ||||||| | ||||  ||||||||||||||| ||| ||||||    
T  5579762 ggtggtcggggtttgaaccccagaccttgcatatattatgcactgtccctaccaactgagctaagctcacaagga 5579688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 233 - 291
Target Start/End: Original strand, 19626518 - 19626576
Alignment:
Q  233 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||||| |||| |||| |||||||||||| ||||||| |||||| | ||||||||||    
T  19626518 gtggccggtgtttgaaccccggaccttgcatatattatgcattgtccaaaccaactgag 19626576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 27833393 - 27833455
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 294  Q
    ||||| |||||||| |||| |||||||| ||| ||||||| ||||||  ||||||||||||||    
T  27833393 ggtggtcggggtttgaaccccggaccttacatatattatgcattgtccttaccaactgagcta 27833455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 46737853 - 46737791
Alignment:
Q  233 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| |||| |||| |||||||||||| ||||||| |||||| | || |||||||||||    
T  46737853 gtggccggtgtttgaaccccggaccttgcatatattatgcattgtccaaacaaactgagctaa 46737791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 3672569 - 3672618
Alignment:
Q  257 cttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    ||||||| |||||||||||||| ||| |||||||||||| ||| ||||||    
T  3672569 cttgcatatattatgtattgtccatatcaactgagctaaactcacaagga 3672618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 8615074 - 8615029
Alignment:
Q  250 ctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| ||||||| ||||||  |||||||||||||||    
T  8615074 ctcggaccttgcatatattatgcattgtccttaccaactgagctaa 8615029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 43579047 - 43579108
Alignment:
Q  234 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||  ||||  |||| |||||||||||||| ||||||  |||||||||||||||    
T  43579047 tggccggggttcgaacccaggactttgcatgtattatgcattgtccctaccaactgagctaa 43579108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 2512378 - 2512312
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatg---tattgtcaataccaactgagctaa 295  Q
    |||||||||||||| ||||||| ||||||||| |||||||    |||||  ||||||||||||||||    
T  2512378 ggtggccggggtttgaacctcgtaccttgcatatattatgctacattgttcataccaactgagctaa 2512312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 20243325 - 20243261
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgt-attatgtattgtcaataccaactgagctaa 295  Q
    |||| ||||||||  |||| |||||||||||| | |||||| |||||| ||||||||||||||||    
T  20243325 ggtgtccggggttcaaaccccggaccttgcatattattatgcattgtccataccaactgagctaa 20243261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 25888949 - 25888893
Alignment:
Q  252 cggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaaggata 308  Q
    |||||||||||| ||||||| || |||  ||||||||||||||| ||| ||||||||    
T  25888949 cggaccttgcatatattatgcatcgtccttaccaactgagctaagctcacaaggata 25888893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 295
Target Start/End: Original strand, 38374186 - 38374246
Alignment:
Q  235 ggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||||| ||||  ||||||||||| || |||| |||||| ||||||| ||||||||    
T  38374186 ggccggggtttgaaccctggaccttgcatatactatgcattgtccataccaattgagctaa 38374246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 42336124 - 42336076
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| |||||||||||||||||||| ||||||  || ||||||||||||    
T  42336124 aaccccggaccttgcatgtattatgcattgtccttatcaactgagctaa 42336076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 45046217 - 45046269
Alignment:
Q  242 gtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 294  Q
    |||| |||| |||||||||||| ||||||||| |||| ||| |||||||||||    
T  45046217 gtttgaaccccggaccttgcatatattatgtactgtccatatcaactgagcta 45046269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 56551584 - 56551647
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| ||||||||||||||||| ||||||| ||||||  |||||||||||||||    
T  56551584 ggtggccggggtttgaacctcggaccttgcatatattatgcattgtccttaccaactgagctaa 56551647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 233 - 295
Target Start/End: Original strand, 47814244 - 47814306
Alignment:
Q  233 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||||||| |||| |||||||||||| |||||||| ||||| ||||||||||||||||    
T  47814244 gtggccggggtttgaaccccggaccttgcatatattatgtgttgtccataccaactgagctaa 47814306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 2431066 - 2431003
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| |||||||| ||||||  ||||||||| | |||||||||||||||||||||||||||||    
T  2431066 ggtggtcggggtttgaacctcataccttgcatattttatgtattgtcaataccaactgagctaa 2431003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 10564461 - 10564520
Alignment:
Q  236 gccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||| |||||| |||||| ||| |||||||||||||| ||||||||||||||||    
T  10564461 gccggggtttgaacctcagaccttacatatattatgtattgtccataccaactgagctaa 10564520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 11949755 - 11949818
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| |||||||| |||| |||||||||||| ||||||| |||||| ||||||||||||||||    
T  11949755 ggtggtcggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 11949818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 299
Target Start/End: Original strand, 22630352 - 22630419
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctc 299  Q
    ||||| |||||||| |||||| |||||||||| ||||||| ||||||| ||||||||||| |||||||    
T  22630352 ggtggtcggggtttgaacctcagaccttgcatatattatgcattgtcactaccaactgagataatctc 22630419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 43034334 - 43034393
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||||||||||| |||||| |||||||||| ||||||| |||||| ||||||||||||    
T  43034334 ggtggccggggtttgaacctcagaccttgcatatattatgcattgtccataccaactgag 43034393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 232 - 306
Target Start/End: Original strand, 28435240 - 28435314
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||||| ||||||| |||| || ||||||||| ||||||| |||||| |||||||||||||||| ||| ||||||    
T  28435240 ggtggctggggtttgaaccccgaaccttgcatatattatgcattgtccataccaactgagctaaactcacaagga 28435314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 230 - 295
Target Start/End: Complemental strand, 42139915 - 42139850
Alignment:
Q  230 gcggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||||| |||| ||||| |||||||||||||| |||||| ||||||| | ||||||    
T  42139915 gcggtggccggggtttgaaccccggacattgcatgtattatgcattgtccataccaaataagctaa 42139850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 20383550 - 20383494
Alignment:
Q  239 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||| |||| |||||||||||| ||||||| |||||| ||||||||||||||||    
T  20383550 ggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 20383494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 3936696 - 3936633
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||  |||| |||||||||||| ||||||| |||||  ||||||||||||||||    
T  3936696 ggtggccggggttcgaaccccggaccttgcatatattatgcattgttcataccaactgagctaa 3936633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 7230349 - 7230286
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| ||||| |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  7230349 ggtggccgaggtttgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 7230286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 9946496 - 9946433
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| |||||||| |||| |||||||||||| | ||||| |||||| ||||||||||||||||    
T  9946496 ggtggtcggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 9946433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 16304090 - 16304153
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| ||||| || | |||||||||||| ||||||| |||||| ||||||||||||||||    
T  16304090 ggtggccgcggtttgaatcccggaccttgcatatattatgcattgtccataccaactgagctaa 16304153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 6087816 - 6087742
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||||| ||||||| |||| | |||||||||| ||||||| ||| || |||||||||||||||| ||| ||||||    
T  6087816 ggtggctggggtttgaaccccagaccttgcatatattatgcattatctataccaactgagctaagctcacaagga 6087742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 675980 - 675924
Alignment:
Q  239 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||| |||| |||||||||||| ||||||| |||||| | ||||||||||||||    
T  675980 ggggtttgaaccccggaccttgcatatattatgcattgtccaaaccaactgagctaa 675924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 16431682 - 16431622
Alignment:
Q  235 ggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||||| |||| | |||||||||| | ||||| |||||| ||||||||||||||||    
T  16431682 ggccggggtttgaaccccagaccttgcatattttatgcattgtccataccaactgagctaa 16431622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 49041973 - 49042029
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaact 288  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| ||| |||||    
T  49041973 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtctatatcaact 49042029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 836227 - 836290
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| ||| |||| ||||||||||||||||| |||| || ||||||  |||||||||||||||    
T  836227 ggtggtcggagtttgaacctcggaccttgcatatattttgcattgtccctaccaactgagctaa 836290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 2888943 - 2888868
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgta-ttgtcaataccaactgagctaatctcccaagga 306  Q
    |||||||||||||| |||| |||||||||||| ||||||  | |||||  ||||||||||||||| ||| ||||||    
T  2888943 ggtggccggggtttgaaccgcggaccttgcatatattatacatttgtccctaccaactgagctaagctcacaagga 2888868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 5924718 - 5924655
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| || ||||| |||| |||||||| ||| |||||||||||||| ||| ||||||||||||    
T  5924718 ggtggtcgaggtttgaaccccggaccttccatatattatgtattgtccatagcaactgagctaa 5924655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 11198397 - 11198334
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| |||||||||||| |||||||  ||||| || | |||||||||||    
T  11198397 ggtggccggggtttgaaccccggaccttgcatatattatgccttgtccattctaactgagctaa 11198334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 19588223 - 19588160
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| ||||  ||||||||||| | ||||| |||||| ||||||| ||||||||    
T  19588223 ggtggccggggtttgaaccctggaccttgcatattttatgcattgtccataccaattgagctaa 19588160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 306
Target Start/End: Complemental strand, 19854619 - 19854560
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||| |||| ||||||| ||||||| |||||| |||||||||||||||| ||| ||||||    
T  19854619 aaccccggatcttgcatatattatgcattgtccataccaactgagctaagctcacaagga 19854560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 19908761 - 19908702
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    ||||| |||||||  ||||||||||||||||| ||||||| ||||||  |||||||||||    
T  19908761 ggtggtcggggttcgaacctcggaccttgcatatattatgcattgtccttaccaactgag 19908702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 20799394 - 20799449
Alignment:
Q  240 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||| |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  20799394 gggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaa 20799449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 23247590 - 23247653
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| | |||||||||| |||||||  ||||| |||||||| |||||||    
T  23247590 ggtggccggggtttaaaccccagaccttgcatatattatgcgttgtccataccaaccgagctaa 23247653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 23810018 - 23809955
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| ||||  | ||||||||| |||||||  ||||| ||||||||||||||||    
T  23810018 ggtggccggggtttgaaccctgaaccttgcatatattatgctttgtccataccaactgagctaa 23809955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 24664983 - 24665046
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| |||||||  |||| |||||||||||| ||||||| ||| || ||||||||||||||||    
T  24664983 ggtggtcggggttcgaaccccggaccttgcatatattatgcattctccataccaactgagctaa 24665046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 24885792 - 24885851
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    ||||||| |||| | || |||||||||||||| | |||||||||||| ||||||||||||    
T  24885792 ggtggccagggtatgaaactcggaccttgcatattttatgtattgtccataccaactgag 24885851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 32711790 - 32711849
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    ||||||| |||||| ||||||||||| ||||| | ||||| |||||| ||||||||||||    
T  32711790 ggtggccagggtttaaacctcggaccatgcatattttatgcattgtccataccaactgag 32711849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 35287499 - 35287562
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||  |||| |||||||||||| | ||||| |||||  ||||||||||||||||    
T  35287499 ggtggccggggttggaaccccggaccttgcatattttatgcattgttcataccaactgagctaa 35287562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 43782297 - 43782360
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| || ||||| |||| | |||||||||| ||||||| ||||||| |||||||||||||||    
T  43782297 ggtggtcgaggtttgaaccgcagaccttgcatatattatgcattgtcattaccaactgagctaa 43782360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 51458727 - 51458684
Alignment:
Q  252 cggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||| | |||||||||||| ||||||||||||||||    
T  51458727 cggaccttgcatattttatgtattgtccataccaactgagctaa 51458684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 54857607 - 54857670
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| |||||||||||| | ||||| |||||  |||||||| |||||||    
T  54857607 ggtggccggggtttgaaccccggaccttgcatattttatgcattgtttataccaaccgagctaa 54857670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 10519208 - 10519141
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatg----tattatgtattgtcaataccaactgagctaa 295  Q
    |||| ||||||||| ||||||| ||||||||||    ||||||| |||||| ||||||||||||||||    
T  10519208 ggtgaccggggtttgaacctcgaaccttgcatgtatatattatgcattgtctataccaactgagctaa 10519141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 232 - 306
Target Start/End: Original strand, 19479469 - 19479543
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    ||||| |||||||| |||| |||||||||||| ||||||| |||||  |||  ||||||||||| ||| ||||||    
T  19479469 ggtggtcggggtttgaaccccggaccttgcatatattatgcattgttcatattaactgagctaagctcacaagga 19479543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 22040711 - 22040645
Alignment:
Q  240 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||||| |||| || ||||||||| ||||||| |||||| ||| |||||||||||| ||| ||||||    
T  22040711 gggtttgaaccccgaaccttgcatatattatgcattgtccatatcaactgagctaaactcgcaagga 22040645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 2186347 - 2186388
Alignment:
Q  254 gaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||| ||||||| |||||| ||||||||||||||||    
T  2186347 gaccttgcatatattatgcattgtccataccaactgagctaa 2186388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 14577501 - 14577562
Alignment:
Q  234 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||| |||  ||||| |||||| ||||||| ||||||  |||||||||||||||    
T  14577501 tggccggggtttgaactccggactttgcatatattatgcattgtccttaccaactgagctaa 14577562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 34247488 - 34247435
Alignment:
Q  253 ggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    ||||||||||| ||||||| ||||||  ||||||||||||||| ||| ||||||    
T  34247488 ggaccttgcatatattatgcattgtccttaccaactgagctaaactcacaagga 34247435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 40070966 - 40071019
Alignment:
Q  238 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||||| ||| ||||||||||||| ||||||| |||||  ||||||||||||    
T  40070966 cggggtttgaacttcggaccttgcatatattatgcattgttcataccaactgag 40071019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 52270044 - 52270085
Alignment:
Q  254 gaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||| ||||||| |||||| ||||||||||||||||    
T  52270044 gaccttgcatatattatgcattgtccataccaactgagctaa 52270085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 897487 - 897431
Alignment:
Q  239 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||| |||| |||||||| ||| ||||||  |||||| ||||||||||||||||    
T  897487 ggggtttgaaccccggaccttacatatattatacattgtccataccaactgagctaa 897431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 21052572 - 21052612
Alignment:
Q  255 accttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||| ||||||||||| || ||||||||||||||||    
T  21052572 accttgcatatattatgtattatccataccaactgagctaa 21052612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 23160099 - 23160047
Alignment:
Q  242 gtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 294  Q
    |||| ||||||||||||| ||| ||||||| ||||||  ||||||||||||||    
T  23160099 gtttgaacctcggaccttacatatattatgcattgtccctaccaactgagcta 23160047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 46676505 - 46676553
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  46676505 aaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 46676553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 49021813 - 49021761
Alignment:
Q  254 gaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||||||||| | |||||||||||| |||||||||| ||||| ||| ||||||    
T  49021813 gaccttgcatattttatgtattgtccataccaactgcgctaaactcacaagga 49021761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 22523004 - 22523067
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||| ||| ||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  22523004 ggtggccgggatttgaacctcgaaccttgcatatattatgtattgtccataccaactgagctaa 22523067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 7206192 - 7206131
Alignment:
Q  234 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||  |||||||||||||||    
T  7206192 tggccggggtttaaacctcggaccttgcatatattatgcattgtctctaccaactgagctaa 7206131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 35820293 - 35820356
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| ||||| |||| |||||||||||||||||||| ||||||  |||||||||||||||    
T  35820293 ggtggccgaggtttgaaccccggaccttgcatgtattatgcattgtccctaccaactgagctaa 35820356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 27848227 - 27848167
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgta-ttgtcaataccaactgag 291  Q
    |||||||||||||| |||| |||||||||||| ||||||| | ||||||||||||||||||    
T  27848227 ggtggccggggtttgaaccccggaccttgcatatattatgcatttgtcaataccaactgag 27848167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 29734754 - 29734686
Alignment:
Q  238 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||||||| |||| |||||||||||| ||||||| |||||| ||| |||||||||||| ||| ||||||    
T  29734754 cggggtttgaaccacggaccttgcatatattatgcattgtccatatcaactgagctaaactcacaagga 29734686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 10735823 - 10735886
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| |||||||||||| ||||||| || |||  |||||||||||||||    
T  10735823 ggtggccggggtttgaaccccggaccttgcatatattatgcatcgtccctaccaactgagctaa 10735886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 22061356 - 22061293
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| ||| ||||||||||||| | |||||||||||  ||||||| ||||||||    
T  22061356 ggtggccggggtttgaacatcggaccttgcatattttatgtattgtacataccaattgagctaa 22061293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 24592838 - 24592901
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| | |||||||||| ||||||| ||||||  |||||||||||||||    
T  24592838 ggtggccggggtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaa 24592901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 25186234 - 25186297
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||| ||||||| |||| |||||||||||| ||||||| |||||| ||| ||||||||||||    
T  25186234 ggtggctggggtttgaaccccggaccttgcatatattatgcattgtccatatcaactgagctaa 25186297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 29544696 - 29544633
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| |||||||||||| ||||||| ||||||  |||||| ||||||||    
T  29544696 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtccctaccaattgagctaa 29544633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 34977273 - 34977214
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||||||||||| |||  |||||||||||| ||||||| |||||| ||||||||||||    
T  34977273 ggtggccggggtttaaactccggaccttgcatatattatgcattgtccataccaactgag 34977214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 44526197 - 44526134
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| || | |||||||||| | ||||||| |||||| ||||||||||||||||    
T  44526197 ggtggccggggtttgaatcccggaccttgcgtatattatgcattgtccataccaactgagctaa 44526134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 295
Target Start/End: Original strand, 8781643 - 8781705
Alignment:
Q  233 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| |||||||| |||| ||||||||||||  |||||| |||||| ||||||||||||||||    
T  8781643 gtggtcggggtttgaaccccggaccttgcatacattatgcattgtccataccaactgagctaa 8781705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 41859921 - 41859847
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||||||||||||| |||| | |||||||||| | ||||| |||||| |||||||||||| ||| ||| ||||||    
T  41859921 ggtggccggggtttgaaccccagaccttgcatattttatgcattgtccataccaactgagttaaactcacaagga 41859847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 41763872 - 41763933
Alignment:
Q  234 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||| |||| |||||| ||||| || |||| |||||| ||||||||||||||||    
T  41763872 tggccggggtttgaaccccggaccgtgcatatactatgcattgtccataccaactgagctaa 41763933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 9686503 - 9686463
Alignment:
Q  255 accttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  9686503 accttgcatatattatgtattgtctataccaactgagctaa 9686463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 20565074 - 20565130
Alignment:
Q  239 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||| |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  20565074 ggggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaa 20565130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 43117189 - 43117245
Alignment:
Q  239 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||| |||||| |||||||||| ||||||| ||||||  |||||||||||||||    
T  43117189 ggggtttgaacctcagaccttgcatatattatgcattgtccttaccaactgagctaa 43117245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 2257040 - 2256981
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||||||||||  |||| | |||||||||| ||||||| |||||| ||||||||||||    
T  2257040 ggtggccggggttcgaaccccagaccttgcatatattatgcattgtccataccaactgag 2256981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 20455960 - 20455897
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||| ||  |||| |||||||||||| ||||||| |||||| ||||||| ||||||||    
T  20455960 ggtggccgggattcgaaccccggaccttgcatatattatgcattgtccataccaattgagctaa 20455897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 30089118 - 30089055
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| ||||| |||| ||||||||| || ||||||| ||||||  |||||||||||||||    
T  30089118 ggtggccgaggtttgaaccccggaccttgtatatattatgcattgtccctaccaactgagctaa 30089055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 30125722 - 30125659
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| ||||| |||| ||||||||| || ||||||| ||||||  |||||||||||||||    
T  30125722 ggtggccgaggtttgaaccccggaccttgtatatattatgcattgtccctaccaactgagctaa 30125659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 31815879 - 31815938
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    ||||| |||||||| |||| |||||||||||| ||||||| ||||||  |||||||||||    
T  31815879 ggtggtcggggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgag 31815938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 42066781 - 42066718
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| ||||  |||| |||||||||||| |||| || |||||| ||||||||||||||||    
T  42066781 ggtggccgaggttcaaaccccggaccttgcatatattgtgcattgtccataccaactgagctaa 42066718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 44810774 - 44810711
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||| ||||||| |||| |||||||||||| |||||||||||| |  ||||||||| |||||    
T  44810774 ggtggctggggtttgaaccccggaccttgcatatattatgtattgcctctaccaactgggctaa 44810711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 19213026 - 19212964
Alignment:
Q  233 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||| |||||| ||| ||| ||||||||| |||||||||||||| | | ||||||||||||    
T  19213026 gtggccagggtttgaacttcgaaccttgcatatattatgtattgtccaaaacaactgagctaa 19212964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 25598575 - 25598617
Alignment:
Q  253 ggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||    
T  25598575 ggaccttgcatatattatgcattgtccataccaactgagctaa 25598617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 41778936 - 41778998
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 294  Q
    |||||||||| ||  ||||||||||||||||| ||||||| |||||| | | |||||||||||    
T  41778936 ggtggccgggattcgaacctcggaccttgcatatattatgcattgtccaaatcaactgagcta 41778998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 4927443 - 4927504
Alignment:
Q  234 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||| |||| |||||||| ||| |||||||  |||||  |||||||||||||||    
T  4927443 tggccggggtttgaaccccggaccttacatatattatgctttgtccctaccaactgagctaa 4927504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 11954014 - 11953954
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagct 293  Q
    |||||||||||||| || || |||| |||||| ||||||||||||||  |||||||||||||    
T  11954014 ggtggccggggttt-aatcttggacattgcatatattatgtattgtccctaccaactgagct 11953954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 42791363 - 42791318
Alignment:
Q  233 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtc 278  Q
    ||||||||||||| |||| |||||||||||| ||||||| ||||||    
T  42791363 gtggccggggtttgaaccccggaccttgcatatattatgcattgtc 42791318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 291
Target Start/End: Original strand, 231608 - 231644
Alignment:
Q  255 accttgcatgtattatgtattgtcaataccaactgag 291  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  231608 accttgcatatattatgtattgtccataccaactgag 231644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 660814 - 660870
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaact 288  Q
    ||||| |||||||| ||||  ||||||||||| ||||||| |||||| |||||||||    
T  660814 ggtggtcggggtttgaaccctggaccttgcatatattatgcattgtccataccaact 660870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 8091160 - 8091224
Alignment:
Q  242 gtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||| |||| |||||||||||| ||||||| |||||| ||||| |||||| ||| ||| ||||||    
T  8091160 gtttgaaccccggaccttgcatatattatgcattgtccatacctactgagataagctcacaagga 8091224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 9383224 - 9383264
Alignment:
Q  255 accttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||| ||||||| |||||| ||||||||||||||||    
T  9383224 accttgcatatattatgcattgtccataccaactgagctaa 9383264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 10156063 - 10156023
Alignment:
Q  255 accttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||| ||||||||||||||  |||||||||||||||    
T  10156063 accttgcatatattatgtattgtccttaccaactgagctaa 10156023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 12124599 - 12124551
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  12124599 aaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 12124551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 20120713 - 20120785
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaag 304  Q
    |||| ||||| ||| |||| || ||||||||| ||||||| ||||||  ||||||||||||||| ||| ||||    
T  20120713 ggtgtccgggatttgaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaagctcacaag 20120785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 21558813 - 21558861
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||||||||||| ||||||| ||||||  ||||| |||||||||    
T  21558813 aacctcggaccttgcatatattatgcattgtccttaccagctgagctaa 21558861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 22608589 - 22608533
Alignment:
Q  239 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||| ||||||  ||||||||| ||||||| ||||||  |||||||||||||||    
T  22608589 ggggtttgaacctcataccttgcatatattatgcattgtctctaccaactgagctaa 22608533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 24593430 - 24593382
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  24593430 aaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 24593382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 31543074 - 31543018
Alignment:
Q  239 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||| |||| |||||||||||| ||||||| ||| || |||||| |||||||||    
T  31543074 ggggtttgaaccccggaccttgcatatattatgcattatccataccatctgagctaa 31543018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 37830784 - 37830724
Alignment:
Q  230 gcggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactga 290  Q
    |||||||||||||||| || || ||| |||| || ||||||||||||||  ||||||||||    
T  37830784 gcggtggccggggtttgaatcttggatcttgtatatattatgtattgtccctaccaactga 37830724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 43043164 - 43043220
Alignment:
Q  239 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||| |||| ||||||||||||  |||||| |||||| |||||||| |||||||    
T  43043164 ggggtttgaaccccggaccttgcatacattatgcattgtctataccaaccgagctaa 43043220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 7791 - 7717
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    ||||| |||||||| ||||||||||||||||||| ||||| |||||| |||||||||||| ||| ||| ||||||    
T  7791 ggtggtcggggtttgaacctcggaccttgcatgttttatgcattgtccataccaactgagttaagctcgcaagga 7717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 185332 - 185269
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| ||||||||| |||| |||| ||||||| | ||||| |||||| ||||||||||||||||    
T  185332 ggtgaccggggtttgaaccccggatcttgcatattttatgcattgtccataccaactgagctaa 185269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 232 - 306
Target Start/End: Original strand, 38130951 - 38131025
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| |||||||||||| ||| ||| ||||||    
T  38130951 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagttaagctcacaagga 38131025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 25340916 - 25340979
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| |||||||||||| | ||||| |||||| ||||||||||||||||    
T  25340916 ggtggccggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 25340979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 25441492 - 25441555
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| | |||||||||| ||||||| |||||| ||||||||||||||||    
T  25441492 ggtggccggggtttgaaccccagaccttgcatatattatgcattgtccataccaactgagctaa 25441555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 48849755 - 48849826
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaag 304  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| |||||||||||| ||| ||| ||||    
T  48849755 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtc-ataccaactgagttaagctcacaag 48849826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 4601913 - 4601854
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| | ||||||||||    
T  4601913 ggtggccggggtttgaaccccggaccttgcatttattatgcattgtccaaaccaactgag 4601854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 14827594 - 14827531
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| |||| ||||||| | ||||| |||||| ||||||||||||||||    
T  14827594 ggtggccggggtttaaaccccggatcttgcatattttatgcattgtccataccaactgagctaa 14827531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 24428473 - 24428528
Alignment:
Q  240 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||| |||||||||| |||||| ||||||| |||||| ||||||||||||||||    
T  24428473 gggtttgaacctcggactttgcatatattatgcattgtccataccaactgagctaa 24428528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 29631255 - 29631192
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| || | || ||||||||| ||||||| |||||| ||||||||||||||||    
T  29631255 ggtggccggggtttgaatcccgaaccttgcatatattatgcattgtccataccaactgagctaa 29631192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 35863805 - 35863868
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| ||||| |||| | |||||||||| ||||||||||||||  |||||||||||||||    
T  35863805 ggtggccgaggtttgaaccccagaccttgcatatattatgtattgtccttaccaactgagctaa 35863868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 45432017 - 45431954
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||| |||||| |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  45432017 ggtggccagggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaa 45431954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 45885469 - 45885532
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||||| |||||||||| ||||||| |  ||| ||||||||||||||||    
T  45885469 ggtggccggggtttgaacctcagaccttgcatatattatgcaaggtccataccaactgagctaa 45885532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 53996368 - 53996294
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||||||||| ||  |||| | |||||||||| ||||||| |||||| |||||||||||||||| ||| ||||||    
T  53996368 ggtggccgggattcgaaccccagaccttgcatatattatgcattgtccataccaactgagctaagctcacaagga 53996294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 977953 - 977996
Alignment:
Q  252 cggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||| ||||||| |||||| ||||||||||||||||    
T  977953 cggaccttgcatatattatgcattgtccataccaactgagctaa 977996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 2662161 - 2662098
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||| |||| ||| ||| ||||||||| ||||||| ||||||  |||||||||||||||    
T  2662161 ggtggccggagtttaaacttcgaaccttgcatatattatgcattgtctttaccaactgagctaa 2662098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 11358303 - 11358240
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| |||| ||||||| ||||||| ||||||  ||||||| |||||||    
T  11358303 ggtggccggggtttgaaccccggatcttgcatatattatgaattgtcgctaccaaccgagctaa 11358240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 299
Target Start/End: Original strand, 16663236 - 16663295
Alignment:
Q  240 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctc 299  Q
    |||||| |||| |||||||||||| ||||||| ||| || |||||||||||| |||||||    
T  16663236 gggtttgaaccccggaccttgcatatattatgcattatccataccaactgagataatctc 16663295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 16792966 - 16793029
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| ||||||||| ||||  ||||||||||| ||||||| |||||| |||||||||| |||||    
T  16792966 ggtgaccggggtttgaaccctggaccttgcatatattatgcattgtctataccaactgtgctaa 16793029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 21914847 - 21914890
Alignment:
Q  252 cggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||||||  |||||||||||||| |||||||||||||||    
T  21914847 cggaccttgcatacattatgtattgtcattaccaactgagctaa 21914890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 22722471 - 22722408
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| |||||||| ||||||||||||||||| | ||||| |||||  |||| |||||||||||    
T  22722471 ggtggtcggggtttgaacctcggaccttgcatattttatgcattgttcatactaactgagctaa 22722408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 27185546 - 27185483
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| || ||||| |||| | |||||||||| ||||||||||||||  |||||||||||||||    
T  27185546 ggtggtcgaggtttgaaccccagaccttgcatatattatgtattgtccctaccaactgagctaa 27185483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 32843254 - 32843317
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| | |||||||||| | ||||| |||||| | ||||||||||||||    
T  32843254 ggtggccggggtttgaaccccagaccttgcatattttatgcattgtccaaaccaactgagctaa 32843317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 34899166 - 34899103
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| |||||||| |||| |||||||||||| ||||||| ||||||  ||| |||||||||||    
T  34899166 ggtggtcggggtttgaaccccggaccttgcatatattatgcattgtccctacgaactgagctaa 34899103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 51882192 - 51882251
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||||||||||| ||||  ||| ||||||| ||||||| |||||| ||||||||||||    
T  51882192 ggtggccggggtttgaaccctggatcttgcatatattatgcattgtccataccaactgag 51882251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 52119445 - 52119382
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||  |||| || ||||||||| ||||||| ||||||  |||||||||||||||    
T  52119445 ggtggccggggttcgaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaa 52119382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 8075854 - 8075808
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtc 278  Q
    |||||||||||||| |||||| |||||||||| ||||||| ||||||    
T  8075854 ggtggccggggtttgaacctcagaccttgcatatattatgcattgtc 8075808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 22799718 - 22799780
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 294  Q
    ||||| || ||||| ||||||||||||||||||| ||||| ||||||  ||| ||||||||||    
T  22799718 ggtggtcgaggtttgaacctcggaccttgcatgttttatgcattgtccttacaaactgagcta 22799780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 233 - 295
Target Start/End: Original strand, 38034802 - 38034864
Alignment:
Q  233 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||| ||||| |||| |||||||||||| | ||||||||||||   ||||||||||||||    
T  38034802 gtggccgaggtttgaaccccggaccttgcatattttatgtattgtcccaaccaactgagctaa 38034864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 42398001 - 42398039
Alignment:
Q  252 cggaccttgcatgtattatgtattgtcaataccaactga 290  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  42398001 cggaccttgcatatattatgcattgtcaataccaactga 42398039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 43345020 - 43345062
Alignment:
Q  253 ggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||||| |||||||||||||  ||||||||||||||||    
T  43345020 ggaccttgcatatattatgtattgttcataccaactgagctaa 43345062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 44579700 - 44579642
Alignment:
Q  237 ccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||  |||| |||||||||||| | ||||| |||||| ||||||||||||||||    
T  44579700 ccggggttcgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 44579642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 2186425 - 2186478
Alignment:
Q  238 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||||| |||| | |||||| ||| |||||||||||||| ||||||||||||    
T  2186425 cggggtttgaaccccagaccttacatatattatgtattgtccataccaactgag 2186478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 10498709 - 10498750
Alignment:
Q  254 gaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||| ||||||| |||||| ||||||||||||||||    
T  10498709 gaccttgcatatattatgcattgtccataccaactgagctaa 10498750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 11969657 - 11969702
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagc 292  Q
    ||||||||||||||||||||||||| ||| ||  ||||||||||||    
T  11969657 aacctcggaccttgcatgtattatgcattttccttaccaactgagc 11969702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 17507714 - 17507755
Alignment:
Q  255 accttgcatgtattatgtattgtcaataccaactgagctaat 296  Q
    ||||||||| ||||||| |||||||||| |||||||||||||    
T  17507714 accttgcatatattatgcattgtcaatatcaactgagctaat 17507755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 23147976 - 23148033
Alignment:
Q  238 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||  |||| ||||||| |||| ||||||||||||||  |||||||||||||||    
T  23147976 cggggttcgaaccccggacctcgcatatattatgtattgtccttaccaactgagctaa 23148033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 334839 - 334899
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgta-ttgtcaataccaactgag 291  Q
    |||||||||||||| |||| |||||||||||| | ||||| | ||||| ||||||||||||    
T  334839 ggtggccggggtttgaaccccggaccttgcatattttatgcatttgtccataccaactgag 334899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 8136624 - 8136684
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagc 292  Q
    ||||| |||||||| ||||| ||||||||||| ||||||| || ||| |||||||| ||||    
T  8136624 ggtggtcggggtttgaaccttggaccttgcatatattatgcatcgtccataccaaccgagc 8136684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 19468505 - 19468461
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||| |||||||||||| ||||||| |||||| ||||||||||||    
T  19468505 aaccacggaccttgcatatattatgcattgtccataccaactgag 19468461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 20400139 - 20400083
Alignment:
Q  239 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||| |||||| |||||||||| ||||||||||||||  |  ||||||||||||    
T  20400139 ggggtttgaacctcagaccttgcatatattatgtattgtctctgtcaactgagctaa 20400083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 295
Target Start/End: Original strand, 21506753 - 21506813
Alignment:
Q  235 ggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||||  |||| | |||||||||| | ||||| |||||| ||||||||||||||||    
T  21506753 ggccggggttcaaaccccagaccttgcatattttatgcattgtccataccaactgagctaa 21506813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 32629134 - 32629086
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| |||||||||||| | ||||| |||||| ||||||||||||||||    
T  32629134 aaccccggaccttgcatattttatgcattgtccataccaactgagctaa 32629086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 35392049 - 35392009
Alignment:
Q  255 accttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| ||| ||||||||||||||| |||||||||||||||    
T  35392049 accttacatatattatgtattgtcattaccaactgagctaa 35392009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 39100075 - 39100139
Alignment:
Q  232 ggtggccggggtttcaacc-tcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| ||||| |||| ||||||||||||| ||||||| |||||  ||| ||||||||||||    
T  39100075 ggtggccgaggtttgaaccatcggaccttgcatatattatgcattgtttataacaactgagctaa 39100139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 291
Target Start/End: Complemental strand, 43011368 - 43011332
Alignment:
Q  255 accttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  43011368 accttgcatgtattatgtattgtctatatcaactgag 43011332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 50570204 - 50570244
Alignment:
Q  255 accttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||| ||||||| |||||| ||||||||||||||||    
T  50570204 accttgcatatattatgcattgtctataccaactgagctaa 50570244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 55126068 - 55126012
Alignment:
Q  239 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||| ||||||| ||||||||| ||||||||||||||   | ||||||||||||    
T  55126068 ggggtttgaacctcgaaccttgcatatattatgtattgtcctcatcaactgagctaa 55126012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 233 - 306
Target Start/End: Original strand, 655742 - 655815
Alignment:
Q  233 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    ||||||||||||  |||| |||||||||||| ||||||| |||||| |||||||||||||||| ||| ||||||    
T  655742 gtggccggggttcgaaccccggaccttgcatatattatgcattgtcgataccaactgagctaagctcacaagga 655815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 26400933 - 26400870
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||  |||| |||||||||||| |||||||||||||| ||||||| ||||||||    
T  26400933 ggtggccggggttcaaaccccggaccttgcatatattatgtattgtccataccaattgagctaa 26400870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 232 - 306
Target Start/End: Original strand, 14296949 - 14297023
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||||||||||||| |||| |||||||| ||| | |||||||||||| ||||||||| |||||| ||| ||||||    
T  14296949 ggtggccggggtttgaaccccggaccttacatattttatgtattgtccataccaactcagctaagctcacaagga 14297023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 8569778 - 8569719
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| ||||||| ||||    
T  8569778 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaattgag 8569719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 17151305 - 17151242
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| ||||| |||| | |||||||||| ||||||||||||||| |||||||| ||||||    
T  17151305 ggtggccgaggtttgaaccccagaccttgcatatattatgtattgtcactaccaacttagctaa 17151242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 29740551 - 29740488
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| |||||||||| | ||||||| |||||| ||||||| ||||||||    
T  29740551 ggtggccggggtttgaaccccggaccttgcgtatattatgcattgtccataccaattgagctaa 29740488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 32053857 - 32053794
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||| |||| |||| || ||||||||| ||||||| |||||| ||||||||||||||||    
T  32053857 ggtggccggagtttgaaccacgaaccttgcatatattatgcattgtccataccaactgagctaa 32053794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 20744206 - 20744144
Alignment:
Q  233 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| |||||||| |||| | |||||||||| ||||||| |||||| ||||||||||||||||    
T  20744206 gtggtcggggtttgaaccccagaccttgcatatattatgcattgtccataccaactgagctaa 20744144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 1918465 - 1918509
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||    
T  1918465 aacctcggaccttgcatatattatgcattgtctataccaactgag 1918509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 21599026 - 21598970
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaact 288  Q
    |||||||||||||| |||| || ||||||||| |||||||||||||  |||||||||    
T  21599026 ggtggccggggtttaaaccccgtaccttgcatatattatgtattgttcataccaact 21598970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 2726409 - 2726468
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||| ||||||||  |||| |||||||||||| ||||||| |||||| ||||||||||||    
T  2726409 ggtgaccggggttcgaaccccggaccttgcatatattatgcattgtccataccaactgag 2726468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 4455588 - 4455651
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| |||||||| |||| | |||||||||| |||||||  ||||| ||||||||||||||||    
T  4455588 ggtggtcggggtttgaaccccagaccttgcatatattatgccttgtccataccaactgagctaa 4455651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 5040825 - 5040888
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||| |||| |||  |||||||||||| |||||||| |||||  |||||||||||||||    
T  5040825 ggtggccggagtttgaacaccggaccttgcatatattatgttttgtctttaccaactgagctaa 5040888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 7081654 - 7081709
Alignment:
Q  240 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||||||  |||||||||| ||||||||||||||  || ||||||||||||    
T  7081654 gggtttcaaccttagaccttgcatatattatgtattgtctttatcaactgagctaa 7081709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 8637437 - 8637492
Alignment:
Q  240 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||| ||||||||||||||||| ||||||| ||||||  |||||||||| ||||    
T  8637437 gggtttgaacctcggaccttgcatatattatgcattgtccctaccaactgaactaa 8637492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 13376381 - 13376318
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||| |||||  |||| |||||| ||||||||||||| |||||| ||||||| ||||||||    
T  13376381 ggtggccagggttagaaccccggaccatgcatgtattatgcattgtccataccaattgagctaa 13376318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 18254113 - 18254156
Alignment:
Q  252 cggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||||||||| ||||||  |||||||||||||||    
T  18254113 cggaccttgcatgtattatgcattgtccttaccaactgagctaa 18254156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 21847263 - 21847200
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||| ||  |||| || ||||||||| ||||||||||||||  |||||||||||||||    
T  21847263 ggtggccgggattcgaaccccgtaccttgcatatattatgtattgtccctaccaactgagctaa 21847200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 291
Target Start/End: Complemental strand, 31971590 - 31971539
Alignment:
Q  240 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||| ||||||||||||||||| ||||||| ||||||  |||||||||||    
T  31971590 gggtttgaacctcggaccttgcatatattatgcattgtccttaccaactgag 31971539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 33824950 - 33824887
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| ||||| |||| |||||||||||| ||||||| ||||||  || ||||||||||||    
T  33824950 ggtggccgaggtttgaaccccggaccttgcatatattatgcattgtccttatcaactgagctaa 33824887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 2473670 - 2473609
Alignment:
Q  234 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||| |||| |  ||||||||| ||||||||||||||  ||| |||||||||||    
T  2473670 tggccggggtttaaaccccataccttgcatatattatgtattgtccctactaactgagctaa 2473609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 8810687 - 8810646
Alignment:
Q  254 gaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||| ||||||||||||||  |||||||||||||||    
T  8810687 gaccttgcatatattatgtattgtctttaccaactgagctaa 8810646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 9392666 - 9392723
Alignment:
Q  238 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| ||||||||||||||||| ||||||| ||| |  ||| ||||||||||||    
T  9392666 cggggtttaaacctcggaccttgcatatattatgcatttttcataacaactgagctaa 9392723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 15187132 - 15187087
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgt 277  Q
    ||||| |||||||| ||||||||||||||||| ||||||| |||||    
T  15187132 ggtggtcggggtttgaacctcggaccttgcatatattatgcattgt 15187087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 15473474 - 15473519
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgt 277  Q
    ||||| |||||||| ||||||||||||||||| ||||||| |||||    
T  15473474 ggtggtcggggtttgaacctcggaccttgcatatattatgcattgt 15473519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 34828376 - 34828312
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgt-attatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||  |||||| |||||| ||| | |||||| |||||| ||||||||||||||||    
T  34828376 ggtggccggggttcgaacctcagaccttacatattattatgcattgtccataccaactgagctaa 34828312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 17800 - 17738
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||| ||||||| |||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  17800 ggtggctggggtttgaacc-cggaccttgcatgtattatgcattgtccataccaactgagctaa 17738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 32051524 - 32051587
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| | ||||||||||||||    
T  32051524 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtccaaaccaactgagctaa 32051587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 12800892 - 12800950
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactga 290  Q
    ||||| |||||||| |||| |||||||||||| |||||||||||||| |||||||||||    
T  12800892 ggtggtcggggtttgaaccccggaccttgcatatattatgtattgtccataccaactga 12800950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 12748970 - 12748913
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactg 289  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| ||||||||||    
T  12748970 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaactg 12748913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 230 - 295
Target Start/End: Complemental strand, 13286201 - 13286137
Alignment:
Q  230 gcggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||||| |||| |||| ||||||| ||||||| |||||| ||||||||||||||||    
T  13286201 gcggtggccggggtttgaacc-cggatcttgcatatattatgcattgtctataccaactgagctaa 13286137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 308
Target Start/End: Original strand, 8717467 - 8717543
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaaggata 308  Q
    |||||||| ||||| |||| || ||||||||| ||||||| |||||| |||||||||||||||| ||| | ||||||    
T  8717467 ggtggccgaggtttgaaccccgaaccttgcatatattatgcattgtccataccaactgagctaaactcacgaggata 8717543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 12910820 - 12910872
Alignment:
Q  254 gaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||||||||| ||||||| |||||| |||||||||||||||||||| ||||||    
T  12910820 gaccttgcatatattatgcattgtccataccaactgagctaatctcacaagga 12910872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 36781479 - 36781415
Alignment:
Q  230 gcggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 294  Q
    ||||||| |||||||| |||| ||||| |||||| ||||||||||||||  ||||||||||||||    
T  36781479 gcggtggtcggggtttaaaccccggactttgcatatattatgtattgtccttaccaactgagcta 36781415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 444482 - 444419
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| |||||||||||| ||||||| ||||||  |||||| ||||||||    
T  444482 ggtggccggggtttaaaccccggaccttgcatatattatgcattgtccttaccaattgagctaa 444419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 11709055 - 11708992
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| |||||||| ||| ||||||||||||| ||||||| ||||||  |||||||||||||||    
T  11709055 ggtggtcggggtttgaacttcggaccttgcatatattatgcattgtccctaccaactgagctaa 11708992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 13357433 - 13357492
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||||| ||||| ||||||| ||||||||| ||||||| |||||| ||||||||||||    
T  13357433 ggtggccgaggtttgaacctcgtaccttgcatatattatgcattgtccataccaactgag 13357492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 19163528 - 19163591
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| |||||||| |||| ||||||||||||  |||||| |||||| ||||||||||||||||    
T  19163528 ggtggtcggggtttgaaccccggaccttgcataaattatgcattgtccataccaactgagctaa 19163591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 27587290 - 27587227
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| |||||||||||| ||| ||| ||||||  |||||||||||||||    
T  27587290 ggtggccggggtttgaaccccggaccttgcatatatcatgcattgtccttaccaactgagctaa 27587227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 306
Target Start/End: Original strand, 6235543 - 6235617
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||||||||||||| || | |||||||| ||| ||||||| || ||| |||||||||||||||| ||| ||||||    
T  6235543 ggtggccggggtttgaatcccggaccttacatatattatgcatcgtccataccaactgagctaaactcacaagga 6235617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 7997009 - 7996935
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    ||||| |||||||| |||| | |||||||||| |||||||  ||||| |||||||||||||||| ||| ||||||    
T  7997009 ggtggtcggggtttgaaccccagaccttgcatatattatgcgttgtccataccaactgagctaagctcacaagga 7996935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 25136836 - 25136898
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 294  Q
    |||||||| ||||| ||||||||||||||||| | |||||  ||||| |||||||||||||||    
T  25136836 ggtggccgaggtttgaacctcggaccttgcatattttatgccttgtccataccaactgagcta 25136898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 42208470 - 42208524
Alignment:
Q  241 ggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| ||||||||||||||||| ||||||| ||||||  |||||||||||||||    
T  42208470 ggtttgaacctcggaccttgcatatattatgcattgtccttaccaactgagctaa 42208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 304
Target Start/End: Complemental strand, 32421630 - 32421566
Alignment:
Q  240 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaag 304  Q
    |||||| |||| |||||||||||| |||||| ||||||| |||||||||||| ||| ||| ||||    
T  32421630 gggtttgaaccccggaccttgcatatattatatattgtccataccaactgagttaagctcacaag 32421566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 43962035 - 43962079
Alignment:
Q  251 tcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||    
T  43962035 tcggaccttgcatatattatgtattgtccttaccaactgagctaa 43962079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 15001267 - 15001326
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||||||||||| ||||| ||||||||||| | ||||| |||||| | ||||||||||    
T  15001267 ggtggccggggtttgaaccttggaccttgcatattttatgcattgtcgaaaccaactgag 15001326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 17898148 - 17898089
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||||||||||  || | |||||||||||| |||||||| ||||| ||||||||||||    
T  17898148 ggtggccggggttagaatcccggaccttgcatatattatgttttgtccataccaactgag 17898089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 32944832 - 32944891
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    ||||| |||||||| |||||| |||||||||| | ||||| |||||| ||||||||||||    
T  32944832 ggtggtcggggtttgaacctcagaccttgcatattttatgcattgtccataccaactgag 32944891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 40679721 - 40679784
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| ||||| |||| |||||||||||| | |||| ||||| | ||||||||||||||||    
T  40679721 ggtggccgaggtttgaaccccggaccttgcatattttatatattgaccataccaactgagctaa 40679784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 24838162 - 24838224
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 294  Q
    |||||||||||||| |||| |||||||||||| | ||||| ||||||   |||||||||||||    
T  24838162 ggtggccggggtttgaaccccggaccttgcatattttatgcattgtcctaaccaactgagcta 24838224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 30427779 - 30427737
Alignment:
Q  253 ggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||    
T  30427779 ggaccttgcatatattatgcattgtccataccaactgagctaa 30427737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 37141426 - 37141368
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactga 290  Q
    ||||||||| |||| |||| || ||||||||| ||||||| |||||| |||||||||||    
T  37141426 ggtggccggagtttgaaccccgaaccttgcatatattatgcattgtccataccaactga 37141368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 11771758 - 11771713
Alignment:
Q  250 ctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| ||||||||||||||  || ||||||||||||    
T  11771758 ctcggaccttgcatatattatgtattgtctctatcaactgagctaa 11771713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 24195308 - 24195255
Alignment:
Q  242 gtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| |||| |||||||||||| |||||||||||||  ||| ||||||||||||    
T  24195308 gtttgaaccccggaccttgcatatattatgtattgttcatatcaactgagctaa 24195255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 37938558 - 37938501
Alignment:
Q  238 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| ||| |||||||||| |||||| ||||||| ||| || ||||||||||||||||    
T  37938558 cgggatttgaacctcggactttgcatatattatgcattatccataccaactgagctaa 37938501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 2554226 - 2554278
Alignment:
Q  254 gaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||||||||| | |||||||||||| ||| |||||||||||| ||| ||||||    
T  2554226 gaccttgcatattttatgtattgtccatatcaactgagctaagctcacaagga 2554278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 9656004 - 9656052
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||||||||||| | ||||| ||||||  |||||||||||||||    
T  9656004 aacctcggaccttgcatattttatgcattgtccttaccaactgagctaa 9656052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 308
Target Start/End: Complemental strand, 17704082 - 17704006
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaaggata 308  Q
    |||||||| ||||| || | | |||||||||| ||||||| ||||||  ||||||||||||||| ||| | ||||||    
T  17704082 ggtggccgaggtttgaatcacagaccttgcatatattatgcattgtccttaccaactgagctaagctcacgaggata 17704006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 19778119 - 19778071
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  19778119 aaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 19778071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 23852965 - 23852917
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| |||||||||||| ||||||| |||||| ||||| ||||||||||    
T  23852965 aaccacggaccttgcatatattatgcattgtccataccgactgagctaa 23852917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 39821950 - 39821890
Alignment:
Q  235 ggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| |||||| |||| | |||||||||| ||||||| ||||||  |||||||||||||||    
T  39821950 ggcctgggtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaa 39821890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 40795431 - 40795387
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||| |||||||||||| |||||||||||||  ||||||||||||    
T  40795431 aaccccggaccttgcatatattatgtattgttcataccaactgag 40795387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 22522793 - 22522856
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| |||||||| |||||||    
T  22522793 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaaccgagctaa 22522856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 16133059 - 16133120
Alignment:
Q  234 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||| |||||| |||||||||| ||||||| ||||||  |||||||||||||||    
T  16133059 tggccggggtttaaacctctgaccttgcatatattatgcattgtccttaccaactgagctaa 16133120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 20721113 - 20721060
Alignment:
Q  238 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||||| |||| |||||||||||| |||||||||||||| ||||||||||||    
T  20721113 cggggtttgaaccccggaccttgcatatattatgtattgtccataccaactgag 20721060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 247 - 308
Target Start/End: Complemental strand, 20927693 - 20927632
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaaggata 308  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||||||| ||| ||| ||||    
T  20927693 aacctcggatcttgcatatattatgtattgtccataccaactgagctaagctcacaaagata 20927632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 6489076 - 6489013
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| | |||||||||| ||||||| ||||||  |||||||||||||||    
T  6489076 ggtggccggggtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaa 6489013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 6624845 - 6624782
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||  |||| |||||||||||| ||||||| |||||| || |||||||||||||    
T  6624845 ggtggccggggttcgaaccccggaccttgcatatattatgcattgtccatgccaactgagctaa 6624782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 13864413 - 13864354
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    ||||| |||||||| |||| |||||||||||| |||||||||||||  ||||||||||||    
T  13864413 ggtggtcggggtttgaaccccggaccttgcatatattatgtattgttcataccaactgag 13864354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 17090935 - 17090872
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| ||||||||||||  |||||| ||| || ||||||||||||||||    
T  17090935 ggtggccggggtttgaaccccggaccttgcattaattatgcattatccataccaactgagctaa 17090872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 28207201 - 28207138
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||| ||  ||||||||||||||||| | ||||| |||||| ||||||||||||||||    
T  28207201 ggtggccgggattcgaacctcggaccttgcatattttatgcattgtccataccaactgagctaa 28207138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 37932399 - 37932336
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||| |||||  |||| |||||||||||| ||||||| |||||| ||||||||||||||||    
T  37932399 ggtggccagggttcgaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 37932336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 40715941 - 40716004
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| ||| ||| ||||||||    
T  40715941 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtccatatcaattgagctaa 40716004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 18331776 - 18331702
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    ||||||||||| || |||| |||||||||||| | ||||| |||||| ||||||| |||||||| ||| ||||||    
T  18331776 ggtggccggggcttgaaccccggaccttgcatattttatgcattgtccataccaagtgagctaagctcacaagga 18331702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 233 - 306
Target Start/End: Original strand, 10704324 - 10704397
Alignment:
Q  233 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||||||  |||| |||| |||||||||||| | ||||| |||||| |||||||||||||||| ||| ||||||    
T  10704324 gtggccgtagtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacaagga 10704397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 26655533 - 26655472
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagct 293  Q
    |||||||||||||  |||| |||||||| ||| ||||||| |||||| ||||||||||||||    
T  26655533 ggtggccggggttcgaaccccggaccttacatatattatgcattgtccataccaactgagct 26655472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 26927118 - 26927057
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagct 293  Q
    |||||||||||||  |||| |||||||| ||| ||||||| |||||| ||||||||||||||    
T  26927118 ggtggccggggttcgaaccccggaccttacatatattatgcattgtccataccaactgagct 26927057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 18489090 - 18489142
Alignment:
Q  254 gaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||||||||| ||||||| |||||| |||||||||||||||| ||| ||||||    
T  18489090 gaccttgcatatattatgcattgtctataccaactgagctaaactcacaagga 18489142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 35109454 - 35109410
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  35109454 aacctcggaccttgcatatattatgtattgtctttaccaactgag 35109410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 3445239 - 3445302
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||| ||| |||| ||||||||||||  |||||| ||||||  |||||||||||||||    
T  3445239 ggtggccgggatttgaaccccggaccttgcatacattatgcattgtccttaccaactgagctaa 3445302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 16036896 - 16036833
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||| | |||| ||||  ||||||||||| |||||||||||||| || |||||||||||||    
T  16036896 ggtggccagagtttgaaccatggaccttgcatatattatgtattgtccatgccaactgagctaa 16036833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 26409322 - 26409259
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| |||||||  |||| |||||||| ||| ||||||| |||||| ||||||||||||||||    
T  26409322 ggtgggcggggttcgaaccccggaccttacatatattatgcattgtccataccaactgagctaa 26409259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 34436920 - 34436857
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| |||||||| |||| ||| |||||||| ||||||| ||||||  |||||||||||||||    
T  34436920 ggtgggcggggtttgaaccccggcccttgcatatattatgcattgtccctaccaactgagctaa 34436857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 11720962 - 11720889
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||||||||||||| |||| || ||||||||| ||||||| ||||||  ||||||||||| ||| ||| ||||||    
T  11720962 ggtggccggggtttgaaccccg-accttgcatatattatgcattgtccctaccaactgagttaagctcacaagga 11720889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 308
Target Start/End: Complemental strand, 12190055 - 12189985
Alignment:
Q  238 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaaggata 308  Q
    |||||||| |||| | |||||| ||| |||||||||||||| ||||||||| ||||||  || ||||||||    
T  12190055 cggggtttgaacccccgaccttacatatattatgtattgtccataccaactaagctaagttcacaaggata 12189985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 23036699 - 23036761
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 294  Q
    |||||| | ||||| ||||||  ||||||||| |||||||| ||||| |||||||||||||||    
T  23036699 ggtggctgaggtttgaacctctaaccttgcatatattatgttttgtccataccaactgagcta 23036761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 34191501 - 34191439
Alignment:
Q  233 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||||||| |||| |||||||||||| | ||||| ||||||   ||||||||||||||    
T  34191501 gtggccggggtttgaaccccggaccttgcatattttatgcattgtcccaaccaactgagctaa 34191439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 233 - 291
Target Start/End: Original strand, 40837896 - 40837954
Alignment:
Q  233 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||| |||||||| |||| |||||||||||| | |||| ||||||| ||||||||||||    
T  40837896 gtggtcggggtttgaaccccggaccttgcatattttatatattgtccataccaactgag 40837954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 31602823 - 31602880
Alignment:
Q  238 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| || |||| ||||||||| ||||||| |||||  ||||||||||||||||    
T  31602823 cggggtttgaatctcgaaccttgcatatattatgcattgttcataccaactgagctaa 31602880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 41650949 - 41650990
Alignment:
Q  250 ctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||||||||||| ||||||| |||||| ||||||||||||    
T  41650949 ctcggaccttgcatatattatgcattgtccataccaactgag 41650990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 4009936 - 4009872
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtatt-atgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| ||| |||||||| |||| ||| ||||||  |||||||||||||||    
T  4009936 ggtggccggggtttgaaccccggcccttgcatatattaatgcattgtccttaccaactgagctaa 4009872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 18391654 - 18391606
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||||||||||| | ||||| ||||||  |||||||||||||||    
T  18391654 aacctcggaccttgcatattttatgcattgtccttaccaactgagctaa 18391606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 296
Target Start/End: Complemental strand, 18789105 - 18789041
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaat 296  Q
    |||||| ||||||| |||| || ||||||||| | ||||| ||||||  ||||||||||||||||    
T  18789105 ggtggctggggtttgaaccccgaaccttgcatattttatgcattgtctctaccaactgagctaat 18789041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 24636639 - 24636703
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcat-gtattatgtattgtcaataccaactgagctaa 295  Q
    |||||| ||||||| |||||||||||||||||  | ||||| |||||| |||| |||||||||||    
T  24636639 ggtggctggggtttgaacctcggaccttgcatatttttatgcattgtccatactaactgagctaa 24636703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 39938821 - 39938781
Alignment:
Q  238 cggggtttcaacctcggaccttgcatgtattatgtattgtc 278  Q
    |||||||| ||| ||||||||||||| ||||||||||||||    
T  39938821 cggggtttaaacttcggaccttgcatatattatgtattgtc 39938781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 42505918 - 42505878
Alignment:
Q  255 accttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||| ||||||| |||||| ||||||||||||||||    
T  42505918 accttgcatatattatgcattgtccataccaactgagctaa 42505878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 8269360 - 8269423
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| |||||||| |||| |||||||||||| ||||||||||||||  |||||||||||||||    
T  8269360 ggtggtcggggtttgaaccccggaccttgcatatattatgtattgtccttaccaactgagctaa 8269423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 34521182 - 34521245
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| ||||| |||| |||||||||||| ||||||| |||||| ||||||||||||||||    
T  34521182 ggtggccgaggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 34521245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 236 - 295
Target Start/End: Complemental strand, 25533038 - 25532979
Alignment:
Q  236 gccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||| |||| |||||||||||| ||||||| |||||| ||||||||||| ||||    
T  25533038 gccggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgaactaa 25532979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 34632238 - 34632175
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||| ||| ||||||||| ||||||| ||||||  |||||| ||||||||||||||||    
T  34632238 ggtggccgggatttgaacctcggatcttgcatatattatacattgtctataccaactgagctaa 34632175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 42045364 - 42045427
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||  | |||||||||| ||||||| |||||| ||||||||||||||||    
T  42045364 ggtggccggggtttgaactccagaccttgcatatattatgcattgtccataccaactgagctaa 42045427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 45139998 - 45140061
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||   ||||||||||| ||||||| |||||| ||||||||||||||||    
T  45139998 ggtggccggggtttaaactctggaccttgcatatattatgcattgtccataccaactgagctaa 45140061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 52441503 - 52441566
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||  |||  |||||||||||| ||||||| |||||| ||||||||||||||||    
T  52441503 ggtggccggggttcaaacgccggaccttgcatatattatgcattgtctataccaactgagctaa 52441566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 18166670 - 18166608
Alignment:
Q  233 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| |||||||| |||| ||||| |||||| ||||||| |||||| ||||||||||||||||    
T  18166670 gtggtcggggtttgaaccccggactttgcatatattatgcattgtctataccaactgagctaa 18166608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 294
Target Start/End: Complemental strand, 39303014 - 39302952
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 294  Q
    |||||||||||||| |||| | |||||||||| | ||||||||||||  ||||||||||||||    
T  39303014 ggtggccggggtttgaaccaccgaccttgcatattttatgtattgtccttaccaactgagcta 39302952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 13615610 - 13615666
Alignment:
Q  238 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 294  Q
    |||||||  ||||| ||||||||||||||||||| ||||||  ||||||||||||||    
T  13615610 cggggttcgaaccttggaccttgcatgtattatgcattgtccttaccaactgagcta 13615666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 19620630 - 19620582
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| |||||||||||| ||||||||||||||  |||||||||||||||    
T  19620630 aaccccggaccttgcatatattatgtattgtccttaccaactgagctaa 19620582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 26803450 - 26803506
Alignment:
Q  239 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||| |||| ||||| |||||| ||||||| |||||| ||||||||||||||||    
T  26803450 ggggtttgaaccccggactttgcatatattatgcattgtccataccaactgagctaa 26803506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 33153878 - 33153946
Alignment:
Q  238 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||||||| ||||||||||||| ||| ||||||| ||||||  ||||||||||| ||| ||| ||||||    
T  33153878 cggggtttgaacctcggaccttacatatattatgcattgtccctaccaactgagttaagctcacaagga 33153946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 3509953 - 3509996
Alignment:
Q  252 cggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||| ||||||| |||||| ||||||||||||||||    
T  3509953 cggaccttgcatatattatgcattgtccataccaactgagctaa 3509996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 6000135 - 6000194
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||| ||||||||| ||||||||||||||||| ||||||| ||||||   ||||||||||    
T  6000135 ggtgtccggggtttgaacctcggaccttgcatatattatgcattgtcctaaccaactgag 6000194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 8736504 - 8736449
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaac 287  Q
    |||||||||||||| |||| |||||||||||| | ||||| |||||| ||||||||    
T  8736504 ggtggccggggtttgaaccccggaccttgcatattttatgcattgtccataccaac 8736449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 9265828 - 9265887
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||||||||||| || | | |||||||||||||||||  |||||| ||||||||||||    
T  9265828 ggtggccggggtttgaatcccagaccttgcatgtattatacattgtccataccaactgag 9265887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 17139509 - 17139572
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| |||||||| |||| ||||||||| || ||||||| ||||||  |||||||||||||||    
T  17139509 ggtggtcggggtttgaaccccggaccttgaatatattatgcattgtccctaccaactgagctaa 17139572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 27172714 - 27172773
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||||| ||||||| ||||| ||| ||||||| |||||||| ||||| ||||||||||||    
T  27172714 ggtggcaggggtttgaaccttggagcttgcatatattatgttttgtccataccaactgag 27172773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 41884797 - 41884860
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||  |||| ||||||||| || |||||||||||||| | || |||||||||||    
T  41884797 ggtggccggggttcgaaccccggaccttgtatatattatgtattgtccaaactaactgagctaa 41884860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 42888644 - 42888581
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||| ||||||  |||| |||||||||||| | ||||| |||||| ||||||||||||||||    
T  42888644 ggtggcgggggttcgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 42888581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 47528439 - 47528502
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| ||||||||  ||||||||||||||| | ||||||| ||||||  |||||||||||||||    
T  47528439 ggtgtccggggttcgaacctcggaccttgcgtatattatgcattgtccttaccaactgagctaa 47528502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 233 - 295
Target Start/End: Original strand, 41763148 - 41763210
Alignment:
Q  233 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||||||| |||| |||||||||||| | ||||| ||| ||  |||||||||||||||    
T  41763148 gtggccggggtttgaaccccggaccttgcatattttatgcattatccctaccaactgagctaa 41763210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 26755683 - 26755622
Alignment:
Q  234 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||| ||||| |||| |||||||||||| ||| ||| |||||| ||| ||||||||||||    
T  26755683 tggccgaggtttgaaccccggaccttgcatatataatgcattgtccatatcaactgagctaa 26755622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 40680547 - 40680490
Alignment:
Q  238 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| |||| |||||||||||| | |||| |||||||| |||||||| ||||||    
T  40680547 cggggttttaaccccggaccttgcatattttatatattgtcattaccaactaagctaa 40680490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 43611487 - 43611430
Alignment:
Q  238 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| |||| |  ||||| ||| |||||||||||||| ||||||||||||||||    
T  43611487 cggggtttgaaccccataccttacatatattatgtattgtccataccaactgagctaa 43611430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 49183220 - 49183179
Alignment:
Q  254 gaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||| ||||||||||||||  |||||||||||||||    
T  49183220 gaccttgcatatattatgtattgtccttaccaactgagctaa 49183179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 3481630 - 3481566
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgta-ttgtcaataccaactgagctaa 295  Q
    |||||||||||||| |||| | |||||||||| ||||||| | |||||  |||||||||||||||    
T  3481630 ggtggccggggtttgaaccccagaccttgcatatattatgcatttgtccctaccaactgagctaa 3481566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 8253785 - 8253745
Alignment:
Q  255 accttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||| ||||||| |||||| ||||||||||||||||    
T  8253785 accttgcatatattatgcattgtccataccaactgagctaa 8253745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 13094098 - 13094032
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattat---gtattgtcaataccaactgagctaa 295  Q
    |||||||||||||| || |||| ||||||||| ||||||   | |||||||||||||| ||||||||    
T  13094098 ggtggccggggtttgaatctcgaaccttgcatatattattatgcattgtcaataccaagtgagctaa 13094032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 17651372 - 17651428
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaact 288  Q
    ||||||| |||||| |||||| |||||||||| | |||||||||||| ||| |||||    
T  17651372 ggtggccagggtttgaacctcagaccttgcatattttatgtattgtccatatcaact 17651428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 24752639 - 24752703
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgt-attatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||||  |||| | |||||||||| | |||||| |||||| ||||||||||||||||    
T  24752639 ggtggccggggttcgaaccccagaccttgcatattattatgcattgtccataccaactgagctaa 24752703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 25086530 - 25086478
Alignment:
Q  254 gaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    |||||||||| | ||||| |||||| |||||||||||||||| ||| ||||||    
T  25086530 gaccttgcatattttatgcattgtccataccaactgagctaagctcacaagga 25086478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 28016189 - 28016245
Alignment:
Q  239 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||| |||| |||| ||||||| | |||||||||||| || |||||||||||||    
T  28016189 ggggtttgaaccccggatcttgcatattttatgtattgtccatcccaactgagctaa 28016245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 28832163 - 28832235
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaag 304  Q
    ||||| |||| ||| |||||| |||||||||| ||||||| |||||  |||||||||||| ||| ||| ||||    
T  28832163 ggtggtcgggatttgaacctcagaccttgcatatattatgcattgttcataccaactgagttaagctcacaag 28832235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 34142379 - 34142419
Alignment:
Q  255 accttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||| |||||||||||||  ||||||||||||||||    
T  34142379 accttgcatatattatgtattgtgcataccaactgagctaa 34142419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 38448873 - 38448921
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  38448873 aaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 38448921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 39252148 - 39252192
Alignment:
Q  242 gtttcaacctcggaccttgcatgtattatgtattgtcaataccaa 286  Q
    |||| |||| |||||||||||| |||||||||||||| |||||||    
T  39252148 gtttgaaccccggaccttgcatatattatgtattgtcgataccaa 39252192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 47961296 - 47961344
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||||||||||||||| ||||||| ||||||  | |||||||||||||    
T  47961296 aacctcggaccttgcatatattatgcattgtctctgccaactgagctaa 47961344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 52494126 - 52494062
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcat-gtattatgtattgtcaataccaactgagctaa 295  Q
    |||||| ||||||| |||||||||||||||||  | ||||| |||||| |||| |||||||||||    
T  52494126 ggtggctggggtttgaacctcggaccttgcatatttttatgcattgtccatactaactgagctaa 52494062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 1597 - 1534
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||| ||||||  |||| |||||||||||| | ||||| |||||| ||||||||||||||||    
T  1597 ggtggcgggggttcgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 1534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 295
Target Start/End: Complemental strand, 40058 - 40004
Alignment:
Q  241 ggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    ||||| ||||||  ||||||||| ||||||| |||||| ||||||||||||||||    
T  40058 ggtttgaacctctaaccttgcatatattatgcattgtccataccaactgagctaa 40004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 45466 - 45422
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgag 291  Q
    |||| |||||||||||| |||||||||||||| | ||||||||||    
T  45466 aaccccggaccttgcatatattatgtattgtccaaaccaactgag 45422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 161210 - 161136
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    ||||| |||||||| |||| || ||||||||| | ||||| |||||| |||||||||||| ||| ||| ||||||    
T  161210 ggtggtcggggtttgaaccccgaaccttgcatattttatgcattgtccataccaactgagttaagctcacaagga 161136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 294
Target Start/End: Original strand, 3308 - 3369
Alignment:
Q  233 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 294  Q
    ||||||| ||||| |||| || ||||||||| |||||||| |||||  ||||||||||||||    
T  3308 gtggccgaggtttgaaccccgaaccttgcatatattatgtcttgtccttaccaactgagcta 3369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 3188 - 3147
Alignment:
Q  254 gaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||| ||||||||||||||  |||||||||||||||    
T  3188 gaccttgcatatattatgtattgtctttaccaactgagctaa 3147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 31172 - 31221
Alignment:
Q  257 cttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 306  Q
    ||||||| ||||||| |||||| |||||||||||||||| ||| ||||||    
T  31172 cttgcatatattatgcattgtccataccaactgagctaaactcgcaagga 31221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 58916 - 58859
Alignment:
Q  238 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||| |||||||||||||| ||  |||||| ||| || ||||||||||||||||    
T  58916 cggggtttaaacctcggaccttgtatacattatgcattatccataccaactgagctaa 58859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 53784 - 53832
Alignment:
Q  247 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||| |||||||||||||||||||| | ||||  |||||||||||||||    
T  53784 aaccccggaccttgcatgtattatgcactgtccttaccaactgagctaa 53832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 75394 - 75333
Alignment:
Q  232 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagct 293  Q
    |||||||||| ||  |||| |||||||||||| ||||||| ||||||  |||||||||||||    
T  75394 ggtggccgggattcgaaccccggaccttgcatatattatgcattgtccttaccaactgagct 75333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 239874 - 239813
Alignment:
Q  234 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 295  Q
    |||||||||||| |||  ||||| |||||| ||||||| ||||||  |||||||||||||||    
T  239874 tggccggggtttgaactccggactttgcatatattatgcattgtccttaccaactgagctaa 239813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University