View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21245_low_47 (Length: 251)
Name: NF21245_low_47
Description: NF21245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21245_low_47 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 45132747 - 45132980
Alignment:
| Q |
18 |
agctgggtcatcccacattgaaatccttgaaaattctggactcttgcagtatactggggaaccgtgcttagcagatggagacggcatatcaggcaactct |
117 |
Q |
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| T |
45132747 |
agctgggtcatcccacattgaaatccttgaaaattctggactcttgcagtatactggggaaccgtgcttagcagatggagacggcatatcaggcaactct |
45132846 |
T |
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| Q |
118 |
tcaggcatctccttcaattccaggaatgcatcatcagactgaaaagcagggccaaattgttaaaaaatcaaaacatgagaaacacacatgagaaacgaaa |
217 |
Q |
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| T |
45132847 |
tcaggcatctccttcaattccaggaatgcatcatcagactgaaaagcagggccaaattgttaaaaaatcaaaacatgagaaacacacatgagaaacgaaa |
45132946 |
T |
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| Q |
218 |
gtagttttagacaaaccttcagtttgctaaaagc |
251 |
Q |
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| T |
45132947 |
gtagttttagacaaaccttcagtttgctaaaagc |
45132980 |
T |
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