View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21247_high_5 (Length: 310)
Name: NF21247_high_5
Description: NF21247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21247_high_5 |
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Alignment Details
Target: chr1 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 52 - 297
Target Start/End: Original strand, 11759595 - 11759840
Alignment:
| Q |
52 |
aaaacaacttatacaacaatgatctaaaaatttaagaatttaatttgtatatagcgatactgttaaacttttttacacgcccataaaaataaattttgaa |
151 |
Q |
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| T |
11759595 |
aaaacaacttatacaacaatgatctaaaaatttaagaatttaatttgtatataacgatactgtaaaacttttttacacgcgcataaaaataaattttaaa |
11759694 |
T |
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| Q |
152 |
atttaatttggttgttttattgttacattacatgattgtcttcttctcatccttattttaattaagagacaaaactatcataaaggaatgagcaaataat |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11759695 |
atttaatttggttgttttattgttacattacatgattgtcttcttctcatccttattttaattaagagacaaaactatcataaaggaatgagcaaataat |
11759794 |
T |
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| Q |
252 |
ttttattgctaccatttttattttatgctatctataatcctcatct |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11759795 |
ttttattgctaccatttttattttatgctatctataatcctcatct |
11759840 |
T |
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