View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21248_high_6 (Length: 589)
Name: NF21248_high_6
Description: NF21248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21248_high_6 |
 | |
|
| [»] scaffold0070 (2 HSPs) |
| | |
|
| [»] scaffold0830 (2 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 333; Significance: 0; HSPs: 37)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 167 - 570
Target Start/End: Original strand, 25695460 - 25695864
Alignment:
| Q |
167 |
acataatcaaatagattggttggggctgtaa-tctgaagaggaaattgttaagtaaaagaaaagaaatgacctggtgcgaggtatccaacagtagccaaa |
265 |
Q |
| |
|
|||||||||||||||||||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25695460 |
acataatcaaatagattggttgggactgtaaatatgaagaggaaaatgttaagtaaaagaaaagaaatgacctggtgcgaggtatccaacagtagccaaa |
25695559 |
T |
|
| Q |
266 |
gtttgtgtatgagtttgagattgtccttcatccatgagctttgaaataccaaaatcactaacatgtgcaaccatattttcatccaacaagacattggaag |
365 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25695560 |
gtttgtgtatgagttttagattgtccttcatccatcagctttgcaataccaaaatcactaacatgtgcaaccatattttcatccaacaagacattggaag |
25695659 |
T |
|
| Q |
366 |
gctttagatcacaatgaaccacatgcattgaagaaccatgatggagatattccaatgcatatgcaacatctatcattatatttaacctttgcaagaaatt |
465 |
Q |
| |
|
|||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
25695660 |
gctttagatcacaatgaaccactggtattgaggaaccatgatggagatattccaatgcagatgcaacatctatcattatatttaacctttgcaagaaact |
25695759 |
T |
|
| Q |
466 |
tagacaatagctatttgaatatacccatttgtctacacttccatttgacatgaactccatcaccaatgatttgaaatccagatttgaacaactgctgata |
565 |
Q |
| |
|
|||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
25695760 |
tagacaatagttatttgaatataaccatttgtctacacttccatttgacatgaactccatcaccaatgatttgaaatcaagatttgagcaactgctgata |
25695859 |
T |
|
| Q |
566 |
atctt |
570 |
Q |
| |
|
||||| |
|
|
| T |
25695860 |
atctt |
25695864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 231 - 570
Target Start/End: Complemental strand, 24912979 - 24912640
Alignment:
| Q |
231 |
aatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaataccaaaatcactaacatg |
330 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24912979 |
aatgacctggtgcaaggtatccaacagtagctaaagtctgtgtatgagttttagattgtccttcatccatgagctttgcaataccaaaatcactaacatg |
24912880 |
T |
|
| Q |
331 |
tgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacatgcattgaagaaccatgatggagatattccaatgcatatgca |
430 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||| ||||| |
|
|
| T |
24912879 |
tgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacaggcattgaagaaccaagatgaagatattccaatgcagatgca |
24912780 |
T |
|
| Q |
431 |
acatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaatatacccatttgtctacacttccatttgacatgaactccatcacca |
530 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24912779 |
acatctatcattatatttaacctttgcaagaaacttagacaatagttatttgaatataaccatttgtctacacttccatttgacatgaactccatcacca |
24912680 |
T |
|
| Q |
531 |
atgatttgaaatccagatttgaacaactgctgataatctt |
570 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
24912679 |
atgatttgaaatcaagatttgagcaactgctgataatctt |
24912640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 216 - 570
Target Start/End: Original strand, 25715343 - 25715697
Alignment:
| Q |
216 |
aagtaaaagaaaagaaatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaatacc |
315 |
Q |
| |
|
|||||||||| ||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
25715343 |
aagtaaaagagaagaaatgacctggtgcaagatatccaatagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgcaatacc |
25715442 |
T |
|
| Q |
316 |
aaaatcactaacatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacatgcattgaagaaccatgatggagatat |
415 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| |
|
|
| T |
25715443 |
aaaatcgctaacatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccactggtattgaagaaccacgatggagatat |
25715542 |
T |
|
| Q |
416 |
tccaatgcatatgcaacatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaatatacccatttgtctacacttccatttgaca |
515 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
25715543 |
tccaatgcagatgcaacatctatcattatatttaacctttgcaagaaacttagacaatatttatttgaatataaccatttttctacacttccatttgaca |
25715642 |
T |
|
| Q |
516 |
tgaactccatcaccaatgatttgaaatccagatttgaacaactgctgataatctt |
570 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |
|
|
| T |
25715643 |
tgaactccatcaccaatgatttgaaatcaagatttgagcaacttctgataatctt |
25715697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 216 - 570
Target Start/End: Original strand, 25322806 - 25323160
Alignment:
| Q |
216 |
aagtaaaagaaaagaaatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaatacc |
315 |
Q |
| |
|
|||||||||| ||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
25322806 |
aagtaaaagagaagaaatgacctggtgcaagatatccaatagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagcttggcaatacc |
25322905 |
T |
|
| Q |
316 |
aaaatcactaacatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacatgcattgaagaaccatgatggagatat |
415 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||| |
|
|
| T |
25322906 |
aaaatcgctaacatgtgcaaccatatttttatccaataagacattggaaggctttagatcacaatgaaccacaggtattgaagaaccatgatgaagatat |
25323005 |
T |
|
| Q |
416 |
tccaatgcatatgcaacatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaatatacccatttgtctacacttccatttgaca |
515 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
25323006 |
tccaatgcagatgcaacatctatcattatatttaacctttgtaagaaatttagacaatagttatttgaatataaccatttgtcaacacttccatttgaca |
25323105 |
T |
|
| Q |
516 |
tgaactccatcaccaatgatttgaaatccagatttgaacaactgctgataatctt |
570 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |
|
|
| T |
25323106 |
tgaactccatcaccaatgatttgaaatcaagatttgagcaactactgataatctt |
25323160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 216 - 570
Target Start/End: Original strand, 25453132 - 25453486
Alignment:
| Q |
216 |
aagtaaaagaaaagaaatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaatacc |
315 |
Q |
| |
|
|||||||||| || |||||||||||||| |||||||||| |||||| ||||||||||| | |||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
25453132 |
aagtaaaagagaataaatgacctggtgcaaggtatccaatagtagctaaagtttgtgtgtaagtttgagattgtccttcatccatgagcttggcaatacc |
25453231 |
T |
|
| Q |
316 |
aaaatcactaacatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacatgcattgaagaaccatgatggagatat |
415 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |
|
|
| T |
25453232 |
aaaatcgctaacatgtgcaaccatattttcatccaacaagacattagaaggctttagatcacaatgaaccacaggcattgaagaaccatgatgaagatat |
25453331 |
T |
|
| Q |
416 |
tccaatgcatatgcaacatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaatatacccatttgtctacacttccatttgaca |
515 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
25453332 |
tccaatgcagatgcaacatctatcattatatttaacctttgcaagaaactgagacaatagttatttgaatataaccatttgtctacacttccatttgaca |
25453431 |
T |
|
| Q |
516 |
tgaactccatcaccaatgatttgaaatccagatttgaacaactgctgataatctt |
570 |
Q |
| |
|
|||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
25453432 |
tgaattccattaccaatgatttgaaatcaagatttgagcaactgctgataatctt |
25453486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 216 - 570
Target Start/End: Original strand, 25604787 - 25605141
Alignment:
| Q |
216 |
aagtaaaagaaaagaaatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaatacc |
315 |
Q |
| |
|
|||||||||| ||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
25604787 |
aagtaaaagataagaaatgacctggtgcaagatatccaatagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagcttggcaatacc |
25604886 |
T |
|
| Q |
316 |
aaaatcactaacatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacatgcattgaagaaccatgatggagatat |
415 |
Q |
| |
|
|||||| ||||||||||| |||||||||| |||||| |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||| |||||| |
|
|
| T |
25604887 |
aaaatcgctaacatgtgctaccatatttttatccaataagacatttgaaggctttagatctcaatgaaccacaggtattgaagaaccatgatgaagatat |
25604986 |
T |
|
| Q |
416 |
tccaatgcatatgcaacatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaatatacccatttgtctacacttccatttgaca |
515 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
25604987 |
tccaatgcagatgcaacatctatcattatatttaacctttgtaagaaatttagacaatagttatttgaatataaccatttttctacacttccatttgaca |
25605086 |
T |
|
| Q |
516 |
tgaactccatcaccaatgatttgaaatccagatttgaacaactgctgataatctt |
570 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
25605087 |
tgaactccatcaccaatgatttgaaatcaagatttgagcaactgctgataatctt |
25605141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 219 - 573
Target Start/End: Original strand, 23258357 - 23258711
Alignment:
| Q |
219 |
taaaagaaaagaaatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaataccaaa |
318 |
Q |
| |
|
||||||| || |||| ||||||||| |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
23258357 |
taaaagagaacaaattacctggtgcaaggtatccaagagtagctaaagtttgtgtatgagtttcagattgtccttcatccatgagctttgaaataccaaa |
23258456 |
T |
|
| Q |
319 |
atcactaacatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacatgcattgaagaaccatgatggagatattcc |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
23258457 |
atcactaacatgtgcaaccatattttcatccaacaagacattagaaggttttagatcgcaatgaaccacgggtattgaagaaccatgatggagatattcc |
23258556 |
T |
|
| Q |
419 |
aatgcatatgcaacatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaatatacccatttgtctacacttccatttgacatga |
518 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||| |||| | ||| |||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
23258557 |
aatgcagatgcaacatctatcattatatttaacctttgcaagaaatttaagcaatggttatctgaatataaccatttgtccacacttccatttgacatga |
23258656 |
T |
|
| Q |
519 |
actccatcaccaatgatttgaaatccagatttgaacaactgctgataatcttaac |
573 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
23258657 |
actccatcaccaatgatttgaaatcaagattggaacaactgctgataatcttaac |
23258711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 216 - 573
Target Start/End: Original strand, 25341130 - 25341487
Alignment:
| Q |
216 |
aagtaaaagaaaagaaatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaatacc |
315 |
Q |
| |
|
|||| ||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||| |
|
|
| T |
25341130 |
aagttaaagagaagaaatgacctggtgcaaggtatccaatagtagccaaagtttgtgtatgagttttagattgtccttcatccatgagcttggcaatacc |
25341229 |
T |
|
| Q |
316 |
aaaatcactaacatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacatgcattgaagaaccatgatggagatat |
415 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| | | |||||||||||||||||||||| |
|
|
| T |
25341230 |
aaaatcgcttacatgtgcaaccatattttcatccaataagacattagaaggctttagatcgcaatgaaccactggtactgaagaaccatgatggagatat |
25341329 |
T |
|
| Q |
416 |
tccaatgcatatgcaacatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaatatacccatttgtctacacttccatttgaca |
515 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
25341330 |
tccaatgcagatgcaacatctatcattatatttaacctttgcaagaaatttattcaattgttatttgaatataaccaattgtctacacttccatttgaca |
25341429 |
T |
|
| Q |
516 |
tgaactccatcaccaatgatttgaaatccagatttgaacaactgctgataatcttaac |
573 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
25341430 |
tgaactccatcaccaatgatttgaaatcaagatttgaacaactgctgataatcttaac |
25341487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 216 - 570
Target Start/End: Original strand, 25800428 - 25800782
Alignment:
| Q |
216 |
aagtaaaagaaaagaaatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaatacc |
315 |
Q |
| |
|
|||||||| | ||||||| ||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||| |
|
|
| T |
25800428 |
aagtaaaacagaagaaattacctggtgcaagatatccaacagtagccaaagtttgtgtatgagttttagattgtccttcatccatgagcttggcaatacc |
25800527 |
T |
|
| Q |
316 |
aaaatcactaacatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacatgcattgaagaaccatgatggagatat |
415 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
25800528 |
aaaatcgcttacatgtgcaaccatattttcatccaataagacattagaaggctttagatcgcaatgaaccactggtattgaagaaccatgatggagatat |
25800627 |
T |
|
| Q |
416 |
tccaatgcatatgcaacatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaatatacccatttgtctacacttccatttgaca |
515 |
Q |
| |
|
|| | |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
25800628 |
tctactgcagatgcaacatctatcattatatttaacctttgtaagaaatttagacaatagttatttgaatataaccatttgtctacacttccatttgaca |
25800727 |
T |
|
| Q |
516 |
tgaactccatcaccaatgatttgaaatccagatttgaacaactgctgataatctt |
570 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
25800728 |
tgaactccatcaccaatgatttgaaatcaagatttgagcaactgctgataatctt |
25800782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 216 - 570
Target Start/End: Original strand, 25685797 - 25686154
Alignment:
| Q |
216 |
aagtaaaagaaaagaaatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaatacc |
315 |
Q |
| |
|
|||||||||| ||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||| |
|
|
| T |
25685797 |
aagtaaaagagaagaaatgacctggtgcaagatatccaatagtagccaaagtttgtgtatgagtttgagattgtccttcatccaggagcttggcaatacc |
25685896 |
T |
|
| Q |
316 |
aaaatcactaacatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacatgcattgaagaaccatgatggagatat |
415 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||||||||||||| |||||| |
|
|
| T |
25685897 |
aaaatcgctaacatgtgcaaccatattttcatccaacaagacattcgaaggctttagatcgcaatgaaccacaggtattgaagaaccatgatgaagatat |
25685996 |
T |
|
| Q |
416 |
tccaatgcatatgcaacatctatcattatatttaacctttgcaagaaatttagacaatag---ctatttgaatatacccatttgtctacacttccatttg |
512 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
25685997 |
tccaatgcagatgcaacatctatcattatatttaacctttgtaagaaatttagacaatagttattatttgaatataaccatttgtctacacttccatttg |
25686096 |
T |
|
| Q |
513 |
acatgaactccatcaccaatgatttgaaatccagatttgaacaactgctgataatctt |
570 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||| ||||| | ||||||||| |
|
|
| T |
25686097 |
acatgaactccatcaccaatgatttaaaatcaagatttgagcaactaccgataatctt |
25686154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 216 - 570
Target Start/End: Original strand, 25647162 - 25647516
Alignment:
| Q |
216 |
aagtaaaagaaaagaaatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaatacc |
315 |
Q |
| |
|
|||||||| | ||||||||||||||||| || ||||||| |||||||||||| ||||||||||||| ||||||||||||| |||||||||| | |||||| |
|
|
| T |
25647162 |
aagtaaaacagaagaaatgacctggtgcaagatatccaatagtagccaaagtctgtgtatgagttttagattgtccttcacccatgagcttagcaatacc |
25647261 |
T |
|
| Q |
316 |
aaaatcactaacatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacatgcattgaagaaccatgatggagatat |
415 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||| | ||||| |||||||||||||||||| |
|
|
| T |
25647262 |
aaaatcactaacatgtgcaaccatattttcatccaacaagacatttgaaggctttagatctcattgaaccactggtattgatgaaccatgatggagatat |
25647361 |
T |
|
| Q |
416 |
tccaatgcatatgcaacatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaatatacccatttgtctacacttccatttgaca |
515 |
Q |
| |
|
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
25647362 |
tccaattctgatgcaacatctatcattatatttaacctttgcaagaaatttagacaatagttatttgaatataaccatttgtctacacttccatttgaca |
25647461 |
T |
|
| Q |
516 |
tgaactccatcaccaatgatttgaaatccagatttgaacaactgctgataatctt |
570 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |
|
|
| T |
25647462 |
tgaactccatcaccaatgatttgaaatcaagatttgatcaacttctgataatctt |
25647516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 227 - 570
Target Start/End: Original strand, 25570047 - 25570390
Alignment:
| Q |
227 |
aagaaatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaataccaaaatcactaa |
326 |
Q |
| |
|
|||||||||| |||||| |||||||||| |||||| ||||| ||||||||||||| |||||| ||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
25570047 |
aagaaatgacttggtgcaaggtatccaatagtagctaaagtctgtgtatgagttttagattgaccttcatccatgagcttagcaataccaaaatcactaa |
25570146 |
T |
|
| Q |
327 |
catgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacatgcattgaagaaccatgatggagatattccaatgcata |
426 |
Q |
| |
|
|| |||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||| ||||||| ||||||| | |
|
|
| T |
25570147 |
cacgtgcaaccatattttcatccaacatgacattggagggctttagatcacagtgaaccacaggcattgaagaaccatgatgaagatatttcaatgcaga |
25570246 |
T |
|
| Q |
427 |
tgcaacatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaatatacccatttgtctacacttccatttgacatgaactccatc |
526 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25570247 |
tgcaacatctatcattatatttaacctttgcaagaaacttagacaatagttatttgaatataaccatttgtctacacttccatttgacatgaactccatc |
25570346 |
T |
|
| Q |
527 |
accaatgatttgaaatccagatttgaacaactgctgataatctt |
570 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| ||||||||||| |
|
|
| T |
25570347 |
accaatgatttgaaatcaagatttgagcaactactgataatctt |
25570390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 167 - 463
Target Start/End: Original strand, 25490298 - 25490594
Alignment:
| Q |
167 |
acataatcaaatagattggttggggctgtaa-tctgaagaggaaattgttaagtaaaagaaaagaaatgacctggtgcgaggtatccaacagtagccaaa |
265 |
Q |
| |
|
|||||||||||||||||||||||| |||||| | ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25490298 |
acataatcaaatagattggttgggactgtaaatatgaagaggaaaatgttaagtaaaa-aaaagaaatgacctggtgcgaggtatccaacagtagccaaa |
25490396 |
T |
|
| Q |
266 |
gtttgtgtatgagtttgagattgtccttcatccatgagctttgaaataccaaaatcactaacatgtgcaaccatattttcatccaacaagacattggaag |
365 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25490397 |
gtttgtgtatgagttttagattgtccttcatccatgagcttagcaataccaaaatcactaacatgtgcaaccatattttcatccaacaagacattggaag |
25490496 |
T |
|
| Q |
366 |
gctttagatcacaatgaaccacatgcattgaagaaccatgatggagatattccaatgcatatgcaacatctatcattatatttaacctttgcaagaaa |
463 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25490497 |
gctttagatcacaatgaaccacaggcattgaagaaccatgatgaagatattccaatgcagatgcaacatctatcattatatttaacctttgcaagaaa |
25490594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 226 - 573
Target Start/End: Complemental strand, 22900710 - 22900363
Alignment:
| Q |
226 |
aaagaaatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaataccaaaatcacta |
325 |
Q |
| |
|
|||||||| ||||||||| || ||||||| |||||||||||| | ||||||||||| ||||||||||||||||||||| || | |||||||||||||||| |
|
|
| T |
22900710 |
aaagaaattacctggtgcaagatatccaatagtagccaaagtctctgtatgagttttagattgtccttcatccatgagtttggcaataccaaaatcacta |
22900611 |
T |
|
| Q |
326 |
acatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacatgcattgaagaaccatgatggagatattccaatgcat |
425 |
Q |
| |
|
|||||||||||||||| ||| |||| ||||||||| |||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
22900610 |
acatgtgcaaccatatcttcgtccagcaagacattactaggctttagatcacaatggaccacaggtattgaagaaccatgatggagatattccaatgcat |
22900511 |
T |
|
| Q |
426 |
atgcaacatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaatatacccatttgtctacacttccatttgacatgaactccat |
525 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
22900510 |
atgcaacatctatcattatatttaacctttgcaagaaatttaaacaacaattatttgaatataaccatttgtccacacttccatttgacatgaactccat |
22900411 |
T |
|
| Q |
526 |
caccaatgatttgaaatccagatttgaacaactgctgataatcttaac |
573 |
Q |
| |
|
|||||||| ||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
22900410 |
caccaatgctttgaaatcaatatttgaacaactgctgataatcttaac |
22900363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 216 - 573
Target Start/End: Original strand, 25475811 - 25476168
Alignment:
| Q |
216 |
aagtaaaagaaaagaaatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaatacc |
315 |
Q |
| |
|
|||||||||| ||||||||||||||||| | |||||||| ||||| |||||||||||||| || |||| | |||||||| |||||||| | |||||| |
|
|
| T |
25475811 |
aagtaaaagagaagaaatgacctggtgcaatgtatccaatagtaggaaaagtttgtgtatggcatttagatcggccttcatcgatgagcttggcaatacc |
25475910 |
T |
|
| Q |
316 |
aaaatcactaacatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacatgcattgaagaaccatgatggagatat |
415 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||| |||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
25475911 |
aaaatcactaacatgtgcaaccatatttttatccaacatgacattagaaggctttagatcgcaatgaaccacaggtattgaagaaccatgatggagatat |
25476010 |
T |
|
| Q |
416 |
tccaatgcatatgcaacatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaatatacccatttgtctacacttccatttgaca |
515 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||||||||||||| | | |||| | ||||| |||||| ||||||||| |||||||||||||||| |
|
|
| T |
25476011 |
tccaatgcagatgcaacatctatcattatattcaacctttgcaagaaactcaaacaacaattatttaaatataaccatttgtccacacttccatttgaca |
25476110 |
T |
|
| Q |
516 |
tgaactccatcaccaatgatttgaaatccagatttgaacaactgctgataatcttaac |
573 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||| | ||||||||||| |
|
|
| T |
25476111 |
tgaactccatcaccaatgatttgaaatcgagatttgaacaactacaaataatcttaac |
25476168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 216 - 387
Target Start/End: Complemental strand, 24875340 - 24875169
Alignment:
| Q |
216 |
aagtaaaagaaaagaaatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaatacc |
315 |
Q |
| |
|
|||| ||||| |||||||||| |||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
24875340 |
aagttaaagagaagaaatgacttggtgcaaggtatccaatagtagccaaagtttgtgtatgagtttcagattgtccttcatccatgagctttgcaatacc |
24875241 |
T |
|
| Q |
316 |
aaaatcactaacatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccac |
387 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24875240 |
aaaatcgctaacatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccac |
24875169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 426 - 570
Target Start/End: Complemental strand, 24875157 - 24875013
Alignment:
| Q |
426 |
atgcaacatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaatatacccatttgtctacacttccatttgacatgaactccat |
525 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
24875157 |
atgcagcatctatcattatatttaacctttgcaagaaacttagacaatagttatttgaatataaccaactgtctacacttccatttgacatgaactccat |
24875058 |
T |
|
| Q |
526 |
caccaatgatttgaaatccagatttgaacaactgctgataatctt |
570 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||| ||||||||||| |
|
|
| T |
24875057 |
caccaatgatttgaaatcaagatttgagcaactactgataatctt |
24875013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 25799986 - 25799874
Alignment:
| Q |
4 |
tcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttattttcgtttg |
103 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
25799986 |
tcacctgatgccagaatcaatatggcagatgttattgcgacgctaatcaaaatcaagactttggttgttggtgcaaacacagtctagttattttcgtttg |
25799887 |
T |
|
| Q |
104 |
taaactgatgtaa |
116 |
Q |
| |
|
||||||||||||| |
|
|
| T |
25799886 |
taaactgatgtaa |
25799874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 25646745 - 25646630
Alignment:
| Q |
1 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttattttcgt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||| ||||||||||||||| | |
|
|
| T |
25646745 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgacgctaaacaaaatcaagactttggttgttggcgcaaacacagtctagttattttcat |
25646646 |
T |
|
| Q |
101 |
ttgtaaactgatgtaa |
116 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
25646645 |
ttgtaaactgatgtaa |
25646630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 25695063 - 25694948
Alignment:
| Q |
1 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttattttcgt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| | ||||||| ||||||||||||||| | |
|
|
| T |
25695063 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgacgctaatcaaaatcaacactttggttgttcgcgcaaacacagtctagttattttcat |
25694964 |
T |
|
| Q |
101 |
ttgtaaactgatgtaa |
116 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
25694963 |
ttgtaaactgatgtaa |
25694948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 25604340 - 25604225
Alignment:
| Q |
1 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttattttcgt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||| |||||| ||||||||||||||| | |
|
|
| T |
25604340 |
gattcacctgaagcaagaatcaatatggcagaagttattgcttcactaatcaaaatcaagactttggttgttggcgcaaacgcagtctagttattttcat |
25604241 |
T |
|
| Q |
101 |
ttgtaaactgatgtaa |
116 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
25604240 |
ttgtaaactgatgtaa |
25604225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 25489903 - 25489788
Alignment:
| Q |
1 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttattttcgt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||| ||| ||||||| ||||||||||||||| | |
|
|
| T |
25489903 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgacactaatcaaaatcaagactttagttgctggcgcaaacacagtctagttattttcat |
25489804 |
T |
|
| Q |
101 |
ttgtaaactgatgtaa |
116 |
Q |
| |
|
|||||||||| ||||| |
|
|
| T |
25489803 |
ttgtaaactgttgtaa |
25489788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 24913429 - 24913526
Alignment:
| Q |
1 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttattttc |
98 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| | ||||||||||||| |
|
|
| T |
24913429 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgacgctaatcaaaatcaagactttggttgttggcgcaaacacaatctagttattttc |
24913526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 25322359 - 25322262
Alignment:
| Q |
1 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttattttc |
98 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
25322359 |
gattcacctaaagcaagaatcaatatggcagatgttattgcgacgctaatcaaaatcaacactttggttgttggcgcaaacacagtctagttattttc |
25322262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 25385760 - 25385663
Alignment:
| Q |
1 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttattttc |
98 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
25385760 |
gattcacttgaagcaagaatcaatatggcagatgttattgcgacgctaatcaaaatcaacactttggttgttggcgcaaacacagtctagttattttc |
25385663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 24875778 - 24875875
Alignment:
| Q |
1 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttattttc |
98 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||| ||||||| |||||||||||||| |
|
|
| T |
24875778 |
gattcacctgaagcaagaatcaatacggcagatgttattgcgtcgctaatcaaaatcaaggctttggttcttggcgcaaacagggtctagttattttc |
24875875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 24885615 - 24885712
Alignment:
| Q |
1 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttattttc |
98 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||| ||||||| |||||||||||||| |
|
|
| T |
24885615 |
gattcacctgaagcaagaatcaatacggcagatgttattgcgtcgctaatcaaaatcaaggctttggttcttggcgcaaacagggtctagttattttc |
24885712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 25714895 - 25714799
Alignment:
| Q |
2 |
attcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttattttc |
98 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| |||||||| |||| ||||||| |||||||||||||| |
|
|
| T |
25714895 |
attcacctgaagcaagaattaatatggcagatgttattgcgtcgctaatgaaaataaaggctttggttcttggcgcaaacagggtctagttattttc |
25714799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 25452694 - 25452591
Alignment:
| Q |
1 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttattttcgt |
100 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || | |||| || ||||||||| |||| | |
|
|
| T |
25452694 |
gattcacctgaagcaagaattaatattgcagatgttattgcgtcgctaatcaaaatcaagactttggttcttagcgcaagcagggtctagttagtttcat |
25452595 |
T |
|
| Q |
101 |
ttgt |
104 |
Q |
| |
|
|||| |
|
|
| T |
25452594 |
ttgt |
25452591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 25340702 - 25340598
Alignment:
| Q |
1 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttattttcgt |
100 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||| || || | |||| || |||||||||||||| | |
|
|
| T |
25340702 |
gattcacctgaagcaagaattaatattgcagatgttattgcgtcgttaatcaaaatcaagactttgattcttagcgcaagcagggtctagttattttcat |
25340603 |
T |
|
| Q |
101 |
ttgta |
105 |
Q |
| |
|
||||| |
|
|
| T |
25340602 |
ttgta |
25340598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 25569609 - 25569505
Alignment:
| Q |
1 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttattttcgt |
100 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||| || || | |||| || |||||||||||||| | |
|
|
| T |
25569609 |
gattcacctgaagcaagaattaatattgcagatgttattgcgtcgttaatcaaaatcaagactttgattcttagcgcaagcagggtctagttattttcat |
25569510 |
T |
|
| Q |
101 |
ttgta |
105 |
Q |
| |
|
||||| |
|
|
| T |
25569509 |
ttgta |
25569505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 512 - 573
Target Start/End: Original strand, 25311445 - 25311506
Alignment:
| Q |
512 |
gacatgaactccatcaccaatgatttgaaatccagatttgaacaactgctgataatcttaac |
573 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
25311445 |
gacatgaactccatcaccaatgatttgaaatcaagatttgaacaactgctgataatcttaac |
25311506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 25474978 - 25474874
Alignment:
| Q |
1 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttattttcgt |
100 |
Q |
| |
|
|||| |||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| || | ||||||| || ||||||||||| | |
|
|
| T |
25474978 |
gatttacctaaagcaagaattaatatggcagatgttattaagtcgctaatcaaaatcaagactttggttcttagagcaaacagggtatagttattttcat |
25474879 |
T |
|
| Q |
101 |
ttgta |
105 |
Q |
| |
|
||||| |
|
|
| T |
25474878 |
ttgta |
25474874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 25685347 - 25685255
Alignment:
| Q |
4 |
tcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttattt |
96 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||| |||||||| |||| ||||||| |||||||||||| |
|
|
| T |
25685347 |
tcacctgatgcaagaatcaatatggcagatgttattgtgtcgctaatgaaaataaaggctttggttcttggcgcaaacagggtctagttattt |
25685255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 23257632 - 23257562
Alignment:
| Q |
8 |
ctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgca |
78 |
Q |
| |
|
||||| ||||||| |||||| |||||||||||||||| || |||||||||||||||||| || |||||||| |
|
|
| T |
23257632 |
ctgaatcaagaattaatatgacagatgttattgcgtcactcatcaaaatcaagactttgtttattggtgca |
23257562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 22901497 - 22901593
Alignment:
| Q |
1 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttatttt |
97 |
Q |
| |
|
||||||||||||| |||||| ||||||| ||||||||| | ||||||||||||||||||| ||||| ||| || ||||| ||||||||||||| |
|
|
| T |
22901497 |
gattcacctgaagaaagaattaatatggaagatgttatcaagatgctaatcaaaatcaagactatggttcttgatgaaaacatggtctagttatttt |
22901593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 29429222 - 29429157
Alignment:
| Q |
14 |
caagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaa |
80 |
Q |
| |
|
||||||| ||||||| |||||||||| || |||||||||||||||||||||| || ||| |||||| |
|
|
| T |
29429222 |
caagaattaatatggtggatgttattgggt-gctaatcaaaatcaagactttgtttcttgatgcaaa |
29429157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 268; Significance: 1e-149; HSPs: 2)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 231 - 570
Target Start/End: Complemental strand, 16939 - 16600
Alignment:
| Q |
231 |
aatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaataccaaaatcactaacatg |
330 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||| ||||||||||||| |||||| ||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
16939 |
aatgacctggtgcaaggtatccaacagtagctaaagtctgtgtatgagttttagattgaccttcatccatgagcttagcaataccaaaatcactaacatg |
16840 |
T |
|
| Q |
331 |
tgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacatgcattgaagaaccatgatggagatattccaatgcatatgca |
430 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
16839 |
tgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacaggcattgaagaaccatgatgaagatattccaatgcagatgca |
16740 |
T |
|
| Q |
431 |
acatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaatatacccatttgtctacacttccatttgacatgaactccatcacca |
530 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
16739 |
acttctatcattatatttaacctttgcaagaaacttagacaatagttatttgaatataaccaactgtctacacttccatttgacatgaactccatcacca |
16640 |
T |
|
| Q |
531 |
atgatttgaaatccagatttgaacaactgctgataatctt |
570 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
16639 |
atgatttgaaatcaagatttgagcaactgctgataatctt |
16600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 17416 - 17531
Alignment:
| Q |
1 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttggtgcaaacaaagtctagttattttcgt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| | |
|
|
| T |
17416 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgacgctaatcaaaatcaagactttggttgttggcgcaaacacagtctagttattttcat |
17515 |
T |
|
| Q |
101 |
ttgtaaactgatgtaa |
116 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
17516 |
ttgtaaactgatgtaa |
17531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0830 (Bit Score: 261; Significance: 1e-145; HSPs: 2)
Name: scaffold0830
Description:
Target: scaffold0830; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 217 - 573
Target Start/End: Complemental strand, 4439 - 4083
Alignment:
| Q |
217 |
agtaaaagaaaagaaatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaatacca |
316 |
Q |
| |
|
|||| |||||||||||| ||||||||| |||||||| | ||| |||||||||||||||||||||| ||| |||||||| ||||||||||| | ||||||| |
|
|
| T |
4439 |
agtataagaaaagaaattacctggtgcaaggtatccgatagttgccaaagtttgtgtatgagttttagaatgtccttcgtccatgagcttggcaatacca |
4340 |
T |
|
| Q |
317 |
aaatcactaacatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacatgcattgaagaaccatgatggagatatt |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||||||||||||| ||||||| |
|
|
| T |
4339 |
aaatcactaacatgtgcaaccatattttcatccaacaagacatttgaaggctttagatctcaatgaaccacaggtattgaagaaccatgatgtagatatt |
4240 |
T |
|
| Q |
417 |
ccaatgcatatgcaacatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaatatacccatttgtctacacttccatttgacat |
516 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4239 |
ccaatgctgatgcaacatctatcattatatttaacctttgcaagaaatttatacattatttatttgaatataaccatttgtctacacttccatttgacat |
4140 |
T |
|
| Q |
517 |
gaactccatcaccaatgatttgaaatccagatttgaacaactgctgataatcttaac |
573 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4139 |
gaactccatcaccaatgatttgaaatcaagatttgaacaactgctgataatcttaac |
4083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0830; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 4867 - 4929
Alignment:
| Q |
2 |
attcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactt |
64 |
Q |
| |
|
||||||| ||||||||||| |||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4867 |
attcaccggaagcaagaattaatatgacagatgttattgcgtcgctaataaaaatcaagactt |
4929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 242; Significance: 1e-134; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 216 - 573
Target Start/End: Original strand, 10324003 - 10324360
Alignment:
| Q |
216 |
aagtaaaagaaaagaaatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaatacc |
315 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||||| | |||||| |
|
|
| T |
10324003 |
aagtaaaagagaagaaatgacctggtgcaaggtatccaatagtagctaaagtctgtgtatgagtttttgattgtccttcatccatgagcttggcaatacc |
10324102 |
T |
|
| Q |
316 |
aaaatcactaacatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacatgcattgaagaaccatgatggagatat |
415 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
10324103 |
aaaatcgctaacatgtgcaaccatattttcatccaacaagacattagaaggctttagatcacaatgaaccacgggtattgaagaaccatgatggagatat |
10324202 |
T |
|
| Q |
416 |
tccaatgcatatgcaacatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaatatacccatttgtctacacttccatttgaca |
515 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||| ||| |||||||| ||| | ||| |||||||||||||||| |
|
|
| T |
10324203 |
tccaatgcagatgcaacatctatcattatatttaacctatgcaagaaatttaagcaatagttatctgaatataaccaatcgtccacacttccatttgaca |
10324302 |
T |
|
| Q |
516 |
tgaactccatcaccaatgatttgaaatccagatttgaacaactgctgataatcttaac |
573 |
Q |
| |
|
||||||||| |||||||| ||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
10324303 |
tgaactccagcaccaatgctttgaaatcatgatttgaacaactactgataatcttaac |
10324360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 10323573 - 10323500
Alignment:
| Q |
1 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaagactttggttgttgg |
74 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||| |||| |
|
|
| T |
10323573 |
gattcacctgaagcaagaatcaatatggaagatgttattgcgtctctaatcaaaataaagactttggttcttgg |
10323500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 140; Significance: 5e-73; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 287 - 558
Target Start/End: Complemental strand, 16886284 - 16886013
Alignment:
| Q |
287 |
tgtccttcatccatgagctttgaaataccaaaatcactaacatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaacca |
386 |
Q |
| |
|
||||||||||||| |||||| ||||| ||||||||||| ||||||||||||||||||||||| | || ||||| |||||| | |||||||||||||| |
|
|
| T |
16886284 |
tgtccttcatccaagagcttagaaattccaaaatcactgacatgtgcaaccatattttcatctagtaacacattactaggcttcaaatcacaatgaacca |
16886185 |
T |
|
| Q |
387 |
catgcattgaagaaccatgatggagatattccaatgcatatgcaacatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaata |
486 |
Q |
| |
|
| | ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| || ||||||| ||| || || |
|
|
| T |
16886184 |
ctggtattgaagaaccatgatggagatactccaatgcagatgcaacatctatcattatattcaacctttgcaagaaatctaaacaatagttatccgagta |
16886085 |
T |
|
| Q |
487 |
tacccatttgtctacacttccatttgacatgaactccatcaccaatgatttgaaatccagatttgaacaact |
558 |
Q |
| |
|
|| |||||| || ||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
16886084 |
taaccatttttcaacacttccatttgacataaactccatcaccaatgacttgaaatctttatttgaacaact |
16886013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16886994 - 16887054
Alignment:
| Q |
1 |
gattcacctgaagcaagaatcaatatggcagatgttattgcgtcgctaatcaaaatcaaga |
61 |
Q |
| |
|
|||||||| |||||||| || | |||||||||||| | ||| || |||||||||||||||| |
|
|
| T |
16886994 |
gattcaccagaagcaaggattagtatggcagatgtaactgcatcactaatcaaaatcaaga |
16887054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 129; Significance: 2e-66; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 271 - 567
Target Start/End: Complemental strand, 5119578 - 5119282
Alignment:
| Q |
271 |
tgtatgagtttgagattgtccttcatccatgagctttgaaataccaaaatcactaacatgtgcaaccatattttcatccaacaagacattggaaggcttt |
370 |
Q |
| |
|
||||||||||| |||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||| |||||||| ||| ||||| |||||| |
|
|
| T |
5119578 |
tgtatgagtttttgattgtccttcatccaagagcttggaaatcccaaaatcactaacatgtgcaaccatatcttcatccagcaacacattactaggcttc |
5119479 |
T |
|
| Q |
371 |
agatcacaatgaaccacatgcattgaagaaccatgatggagatattccaatgcatatgcaacatctatcattatatttaacctttgcaagaaatttagac |
470 |
Q |
| |
|
| ||||||||||||||| | ||||||||||||||||| ||||| ||||||||| |||| |||||||||||||| || |||||||||||||||| | | |
|
|
| T |
5119478 |
aaatcacaatgaaccactggtattgaagaaccatgatgaagatactccaatgcagatgccacatctatcattatgttcaacctttgcaagaaatccaaaa |
5119379 |
T |
|
| Q |
471 |
aatagctatttgaatatacccatttgtctacacttccatttgacatgaactccatcaccaatgatttgaaatccagatttgaacaactgctgataat |
567 |
Q |
| |
|
||||| ||| || |||| |||| | || ||||||||||||||||| ||||||||||| | ||||||||||| ||||||||||||| || ||||| |
|
|
| T |
5119378 |
aatagttatcagagtataaccatctttccacacttccatttgacataaactccatcactagagatttgaaatcaggatttgaacaactactcataat |
5119282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 271 - 567
Target Start/End: Complemental strand, 5102019 - 5101723
Alignment:
| Q |
271 |
tgtatgagtttgagattgtccttcatccatgagctttgaaataccaaaatcactaacatgtgcaaccatattttcatccaacaagacattggaaggcttt |
370 |
Q |
| |
|
||||||||||| |||||||||||||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||||| || ||||| | |||||| |
|
|
| T |
5102019 |
tgtatgagtttttgattgtccttcatccaagagcttggaaatcccaaaatcactaacatgtgcaatcatattttcatccaataacacattagcaggcttc |
5101920 |
T |
|
| Q |
371 |
agatcacaatgaaccacatgcattgaagaaccatgatggagatattccaatgcatatgcaacatctatcattatatttaacctttgcaagaaatttagac |
470 |
Q |
| |
|
| |||||||||||||| | ||| ||||||||||||||||||| |||||||| |||| |||||||||||||| || |||||||||||||||| | | |
|
|
| T |
5101919 |
aagtcacaatgaaccactggtattaaagaaccatgatggagatactccaatgctgatgccacatctatcattatgttcaacctttgcaagaaatccaaaa |
5101820 |
T |
|
| Q |
471 |
aatagctatttgaatatacccatttgtctacacttccatttgacatgaactccatcaccaatgatttgaaatccagatttgaacaactgctgataat |
567 |
Q |
| |
|
||||| ||| || |||| |||| | || ||||||||||||||||| ||||||||||| | ||||||||||| ||||||||||||| || ||||| |
|
|
| T |
5101819 |
aatagttatcagagtataaccatctttccacacttccatttgacataaactccatcactagagatttgaaatcaggatttgaacaactactcataat |
5101723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 222 - 569
Target Start/End: Original strand, 5079906 - 5080253
Alignment:
| Q |
222 |
aagaaaagaaatgacctggtgcgaggtatccaacagtagccaaagtttgtgtatgagtttgagattgtccttcatccatgagctttgaaataccaaaatc |
321 |
Q |
| |
|
|||| ||||||| ||||||||| | || |||| ||||| ||||| || ||||||| || ||||||||| ||||||| |||||||||||| |||||||| |
|
|
| T |
5079906 |
aagagaagaaattacctggtgcaacataaccaattgtagctaaagtctgagtatgagctttagattgtccatcatccaagagctttgaaatcccaaaatc |
5080005 |
T |
|
| Q |
322 |
actaacatgtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacatgcattgaagaaccatgatggagatattccaat |
421 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||| |||||| | ||||||||||||||| | ||||||||||||||||| ||||| |||||| |
|
|
| T |
5080006 |
actaacatgtgcaaccatattttcatccagtaacacattgctaggcttcaaatcacaatgaaccactggtattgaagaaccatgatgaagatactccaat |
5080105 |
T |
|
| Q |
422 |
gcatatgcaacatctatcattatatttaacctttgcaagaaatttagacaatagctatttgaatatacccatttgtctacacttccatttgacatgaact |
521 |
Q |
| |
|
||| |||| ||||||||||||||| | || |||||||||||| || | ||||| ||| | |||| |||||| || | |||||||||||||| |||| |
|
|
| T |
5080106 |
gcagatgccacatctatcattatagtcaatctttgcaagaaacctaaaaaatagttatcagtgtataaccatttttccaagcttccatttgacattaact |
5080205 |
T |
|
| Q |
522 |
ccatcaccaatgatttgaaatccagatttgaacaactgctgataatct |
569 |
Q |
| |
|
|||| ||||| || |||||| | ||||||||||||| |||| |||| |
|
|
| T |
5080206 |
ccattaccaaagacctgaaattaacatttgaacaactggtgatgatct |
5080253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 109; Significance: 2e-54; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 271 - 567
Target Start/End: Original strand, 14412266 - 14412562
Alignment:
| Q |
271 |
tgtatgagtttgagattgtccttcatccatgagctttgaaataccaaaatcactaacatgtgcaaccatattttcatccaacaagacattggaaggcttt |
370 |
Q |
| |
|
||||||||||| |||||||||||||||| |||||| ||||| ||||||||||| |||||||||| |||| |||||| | || ||||| |||||| |
|
|
| T |
14412266 |
tgtatgagtttttgattgtccttcatccaagagcttggaaatgccaaaatcactcacatgtgcaatcatagcttcatctagtaacacattactaggcttc |
14412365 |
T |
|
| Q |
371 |
agatcacaatgaaccacatgcattgaagaaccatgatggagatattccaatgcatatgcaacatctatcattatatttaacctttgcaagaaatttagac |
470 |
Q |
| |
|
| |||||||||||||| | ||||||||||||||||||||||| ||||||||| |||| |||||||||||||| || |||||||||||||||| | | |
|
|
| T |
14412366 |
aagtcacaatgaaccactggtattgaagaaccatgatggagatactccaatgcagatgccacatctatcattatgttcaacctttgcaagaaatccaaaa |
14412465 |
T |
|
| Q |
471 |
aatagctatttgaatatacccatttgtctacacttccatttgacatgaactccatcaccaatgatttgaaatccagatttgaacaactgctgataat |
567 |
Q |
| |
|
||| | |||| || |||| |||||| || | |||||| |||||||| ||||||||||| | ||||||||||| ||||||||||||| |||||||| |
|
|
| T |
14412466 |
aattgttattagagtataaccatttttccaaacttccgtttgacataaactccatcactagagatttgaaatcaggatttgaacaactactgataat |
14412562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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