View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21248_low_1 (Length: 914)

Name: NF21248_low_1
Description: NF21248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21248_low_1
NF21248_low_1
[»] chr7 (27 HSPs)
chr7 (31-903)||(25061808-25062679)
chr7 (175-903)||(25070650-25071382)
chr7 (518-903)||(25083904-25084288)
chr7 (519-806)||(25089683-25089973)
chr7 (606-898)||(25058166-25058464)
chr7 (814-903)||(25090491-25090580)
chr7 (32-181)||(26633268-26633417)
chr7 (31-181)||(32956678-32956829)
chr7 (44-181)||(33909980-33910118)
chr7 (79-181)||(36438361-36438462)
chr7 (31-181)||(41908080-41908232)
chr7 (34-181)||(30739029-30739177)
chr7 (76-181)||(40001706-40001810)
chr7 (78-181)||(40738001-40738103)
chr7 (128-181)||(26282552-26282605)
chr7 (76-181)||(46221713-46221817)
chr7 (129-181)||(42161130-42161182)
chr7 (78-181)||(9479079-9479181)
chr7 (95-181)||(773894-773979)
chr7 (76-181)||(33419127-33419232)
chr7 (76-181)||(6380094-6380198)
chr7 (76-181)||(7636336-7636440)
chr7 (76-181)||(18015592-18015696)
chr7 (80-181)||(36796382-36796482)
chr7 (76-181)||(42311960-42312063)
chr7 (129-181)||(4099970-4100022)
chr7 (812-901)||(25094670-25094759)
[»] chr8 (15 HSPs)
chr8 (31-181)||(32098188-32098338)
chr8 (76-181)||(18420619-18420723)
chr8 (76-181)||(34523961-34524065)
chr8 (76-181)||(43968080-43968184)
chr8 (76-174)||(30915305-30915402)
chr8 (80-181)||(3471554-3471654)
chr8 (76-181)||(43926333-43926437)
chr8 (76-181)||(3628757-3628861)
chr8 (128-181)||(5869332-5869385)
chr8 (76-181)||(42951779-42951883)
chr8 (128-181)||(12531560-12531613)
chr8 (76-181)||(13585249-13585353)
chr8 (128-179)||(23567286-23567337)
chr8 (128-181)||(39697948-39698001)
chr8 (31-68)||(41666061-41666098)
[»] chr5 (20 HSPs)
chr5 (76-181)||(40956263-40956367)
chr5 (76-178)||(138094-138195)
chr5 (76-181)||(19099324-19099428)
chr5 (31-181)||(27351253-27351403)
chr5 (128-181)||(10591283-10591336)
chr5 (76-181)||(13423814-13423918)
chr5 (76-181)||(43511568-43511672)
chr5 (128-181)||(20975986-20976039)
chr5 (128-181)||(42291891-42291944)
chr5 (129-181)||(13656212-13656264)
chr5 (78-181)||(13474582-13474684)
chr5 (76-181)||(17325794-17325899)
chr5 (128-181)||(17513946-17513999)
chr5 (129-181)||(12661311-12661363)
chr5 (129-181)||(18873459-18873511)
chr5 (129-181)||(29156192-29156244)
chr5 (31-66)||(23069124-23069159)
chr5 (76-181)||(5829335-5829437)
chr5 (128-181)||(4734592-4734645)
chr5 (31-68)||(8379644-8379681)
[»] chr3 (26 HSPs)
chr3 (31-174)||(40152147-40152290)
chr3 (76-181)||(7767013-7767117)
chr3 (78-181)||(19965890-19965992)
chr3 (76-181)||(21784794-21784898)
chr3 (76-181)||(25599096-25599200)
chr3 (76-181)||(28132745-28132849)
chr3 (76-181)||(41707065-41707169)
chr3 (76-181)||(42009272-42009376)
chr3 (76-181)||(51939566-51939670)
chr3 (78-181)||(13401411-13401513)
chr3 (78-181)||(36538196-36538298)
chr3 (76-174)||(21596285-21596382)
chr3 (79-181)||(54430505-54430606)
chr3 (76-181)||(27303137-27303241)
chr3 (76-181)||(29387764-29387868)
chr3 (76-181)||(52655133-52655237)
chr3 (82-181)||(1255060-1255158)
chr3 (76-181)||(8364122-8364226)
chr3 (76-181)||(23164582-23164686)
chr3 (128-181)||(48627039-48627092)
chr3 (76-172)||(43905862-43905957)
chr3 (127-178)||(50677327-50677378)
chr3 (127-181)||(46904742-46904796)
chr3 (76-181)||(18408141-18408245)
chr3 (130-181)||(20762052-20762103)
chr3 (31-68)||(1255182-1255219)
[»] chr1 (24 HSPs)
chr1 (31-181)||(27703539-27703689)
chr1 (76-179)||(25930554-25930656)
chr1 (76-181)||(30004917-30005015)
chr1 (32-181)||(5560388-5560537)
chr1 (76-181)||(37873772-37873876)
chr1 (76-181)||(50371084-50371188)
chr1 (76-181)||(6150671-6150775)
chr1 (76-181)||(12884147-12884251)
chr1 (76-181)||(12971356-12971460)
chr1 (76-181)||(30899606-30899710)
chr1 (76-181)||(42740060-42740164)
chr1 (76-181)||(50552445-50552549)
chr1 (76-181)||(52055502-52055606)
chr1 (31-174)||(15441194-15441337)
chr1 (127-181)||(22386847-22386901)
chr1 (76-181)||(10109670-10109774)
chr1 (76-181)||(14084711-14084815)
chr1 (129-181)||(18127947-18127999)
chr1 (129-181)||(33124640-33124692)
chr1 (127-181)||(17674364-17674418)
chr1 (76-178)||(48722383-48722484)
chr1 (31-68)||(6333639-6333676)
chr1 (129-181)||(13120876-13120928)
chr1 (76-121)||(28189347-28189392)
[»] chr4 (18 HSPs)
chr4 (76-181)||(35653990-35654094)
chr4 (76-181)||(23426176-23426280)
chr4 (31-181)||(21791557-21791707)
chr4 (76-181)||(32130800-32130904)
chr4 (80-181)||(43154798-43154898)
chr4 (76-182)||(19661329-19661434)
chr4 (76-181)||(22423634-22423738)
chr4 (80-181)||(27632352-27632452)
chr4 (129-181)||(45172655-45172707)
chr4 (78-181)||(53011664-53011766)
chr4 (76-178)||(28463601-28463702)
chr4 (76-181)||(5545279-5545383)
chr4 (76-181)||(34982174-34982278)
chr4 (31-67)||(26329154-26329190)
chr4 (129-181)||(41038252-41038304)
chr4 (129-181)||(44478041-44478093)
chr4 (76-177)||(29221635-29221735)
chr4 (128-181)||(55134209-55134262)
[»] chr2 (22 HSPs)
chr2 (76-181)||(36059915-36060019)
chr2 (76-181)||(39081348-39081452)
chr2 (76-181)||(19367429-19367533)
chr2 (76-181)||(1418860-1418963)
chr2 (76-181)||(18676321-18676425)
chr2 (78-181)||(38599354-38599456)
chr2 (76-181)||(6530609-6530713)
chr2 (96-181)||(15457470-15457554)
chr2 (76-181)||(18916064-18916168)
chr2 (80-181)||(26151757-26151857)
chr2 (76-181)||(41096548-41096652)
chr2 (43-181)||(2063721-2063859)
chr2 (76-181)||(7993582-7993686)
chr2 (76-181)||(13020373-13020477)
chr2 (76-181)||(25222273-25222377)
chr2 (129-181)||(4855995-4856047)
chr2 (76-181)||(27302538-27302642)
chr2 (128-181)||(38985719-38985772)
chr2 (129-181)||(18172950-18173002)
chr2 (76-120)||(32186220-32186264)
chr2 (127-181)||(13997314-13997368)
chr2 (147-181)||(17117655-17117689)
[»] scaffold0126 (1 HSPs)
scaffold0126 (76-181)||(16660-16764)
[»] chr6 (15 HSPs)
chr6 (80-181)||(3748578-3748678)
chr6 (76-181)||(12614726-12614830)
chr6 (76-181)||(30915376-30915480)
chr6 (76-181)||(2618305-2618409)
chr6 (43-181)||(57603-57742)
chr6 (129-181)||(628105-628157)
chr6 (80-181)||(6754160-6754260)
chr6 (128-181)||(31861002-31861055)
chr6 (129-181)||(21946109-21946161)
chr6 (31-120)||(11088460-11088548)
chr6 (100-181)||(14893427-14893507)
chr6 (76-120)||(6294229-6294273)
chr6 (82-178)||(19231569-19231663)
chr6 (129-181)||(29401142-29401194)
chr6 (82-181)||(1690643-1690741)
[»] scaffold0181 (1 HSPs)
scaffold0181 (76-181)||(17142-17246)


Alignment Details
Target: chr7 (Bit Score: 804; Significance: 0; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 804; E-Value: 0
Query Start/End: Original strand, 31 - 903
Target Start/End: Original strand, 25061808 - 25062679
Alignment:
Q  31 tatgttacttctttttctttcttcggtacacgtttgagnnnnnnnagactctagttcttctttttggacataaatctgatgctatcaaacttattctcaa 130  Q
    ||||||||||||||||||||||||||||||||||| |        |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25061808 tatgttacttctttttctttcttcggtacacgttttaatttttttagactctagttcttctttttggacataaatctgatgctatcaaact-attctcaa 25061906  T
Q  131 tttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaaaacattataaggtgaaacccatgcaaaagggttgagccaccgactatga 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25061907 tttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaaaacattataaggtgaaacccatgcaaaagggttgagccaccgactatga 25062006  T
Q  231 taattgaaagcaaaagtatggttatttgctttcaaacaccaaaaagagaataacttaaccttttccaaaagttgatacatatgatcttccttttgattaa 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25062007 taattgaaagcaaaagtatggttatttgctttcaaacaccaaaaagagaataacttaaccttgtccaaaagttgatacatatgatcttccttttgattaa 25062106  T
Q  331 aaatcctcttgttcctttctttctaaatcacccacatgctcgagaaccaaaccaacaacaaagtataacgaagggatctggaataacttcctaactaaac 430  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25062107 aaatcctcttgttcctttctttccaaattacccacatgctcgagaaccaaaccaacaacaaagtataatgaagggatctggaataacttcctaactaaac 25062206  T
Q  431 aaactgaatcaaatgacccaatatacatgacggatcggctgaagatatacctaatcattcacgaataagagaccaaataatgcccgcaatatatcaaggc 530  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25062207 aaactgaatcaaatgacccaatatacatgacggatcggctgaagatatacctaatcattcacgaataagagaccaaataatgcccgcaatatatcaaggc 25062306  T
Q  531 cagtctacatcttcagggaaaggcacattggagtaattaacagttgtcttcccatcaagagaaactatatcataaggtgaatcttctccaaattcaattg 630  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  25062307 cagtctacatcttcagggaaaggcacgttggagtaattaacagttgtcttcccatcaagagaaactatatcataaggtgaatcttctccaaattcagttg 25062406  T
Q  631 gcattagcttccaatatagacttggttcccactctgcttctttgattacattcaatatttcctttgttactgtttcactcccctcatttgatagatgaac 730  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25062407 gcattagcttccaatatagacttggttcccactctgcttctttgattacattcaatatttcctttgttactatttcactcccctcatttgatagatgaac 25062506  T
Q  731 tccatcactaagaaataatcaaaccacctaattaaattacggagaaacaaatttgaaacattatagtttaggtgcaaataaatgagaccatacttacatg 830  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25062507 tccatcactaagaaataatcaaaccacctaattaaattacggataaacaaatttgaaacattatagtttaggtgcaaataaatgagaccatacttacatg 25062606  T
Q  831 aaacaaacatctctccaatcatctcttttctgaattgcagaccacatatcaatgacctttatgttcatctcac 903  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25062607 aaacaaacatctctccaatcatctcttttctgaattgcagaccacatatcaatgacctttatgttcatctcac 25062679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 175 - 903
Target Start/End: Original strand, 25070650 - 25071382
Alignment:
Q  175 gaaagaaaacattataaggtgaaacccatgca----aaagggttgagccaccgactatgataattgaaagcaaaagtatggttatttgctttcaaacacc 270  Q
    ||||||||| ||||||||||||||||||||||    ||||||||||||| |||||||||||||| ||||| ||| |||  |||| |||||||||| || |    
T  25070650 gaaagaaaatattataaggtgaaacccatgcataataaagggttgagccgccgactatgataatcgaaaggaaatgtagagttagttgctttcaaccatc 25070749  T
Q  271 aaaaagagaataacttaaccttttccaaaagttgatacatatgatcttccttttgattaaaaatcctcttgttcctttctttctaaatcacccacatgct 370  Q
    ||||||||| || ||||||||| || | |||||||| || |||||||| |||||||||||||||| ||||| ||||||||||| ||||||||||||||      
T  25070750 aaaaagagagtagcttaaccttctctagaagttgatgcacatgatctttcttttgattaaaaatcatcttgctcctttctttccaaatcacccacatgta 25070849  T
Q  371 cgagaaccaaaccaacaacaaagtataacgaagggatctggaataacttcctaactaaacaaactgaatcaaatgacccaatatacatgacggatcggct 470  Q
     |||||||||||||||||||||||| |||||| ||||||||||||||  ||| ||| ||||| ||||||||||||| ||  ||| |||| |||||| |||    
T  25070850 agagaaccaaaccaacaacaaagtagaacgaatggatctggaataaccgccttactgaacaagctgaatcaaatgatccggtatgcatggcggatcagct 25070949  T
Q  471 gaagatatacctaat---cattcacgaataagagaccaaataatgcccgcaatatatcaaggccagtctacatcttcagggaaaggcacattggagtaat 567  Q
    ||||||| ||| ||    |||| | |||||| |||| ||||||| |   |||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  25070950 gaagatacacccaagaaccatttatgaataaaagactaaataatacaaacaatatatcaaggccaatctacatcttcagggaaaggcacattggagaaat 25071049  T
Q  568 taacagttgtcttcccatcaagagaaactatatcataaggtgaatcttctccaaattcaattggcattagcttccaatatagacttggttcccactctgc 667  Q
    |||   |||||||||||||||||| ||| ||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||    
T  25071050 taa---ttgtcttcccatcaagagtaaccatatcataaggtgaatcttctccaaattcagctggcattaacttccaatatagacttggttcccactctgc 25071146  T
Q  668 ttctttgattacattcaatatttcctttgttactgtttcactcccctcatttgatagatgaactccatcactaagaaataatcaaaccacctaattaaat 767  Q
    ||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25071147 ttctttgatgacattcaatatctcctttgttactatttcactcccctcatttgatagatgaactccatcactaagaaataatcaaaccacctaattaaat 25071246  T
Q  768 tacggagaaacaaatttgaaacattatagtttaggtgcaaataaatgagaccatacttacatgaaacaaacatctctccaatcatctcttttctgaattg 867  Q
    ||  || ||||||||||| || ||| |||||| |||||| | ||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  25071247 tattgaaaaacaaatttgtaatattttagttttggtgcatacaaatgcgaccatacttacatgaaacaaaaatctctccaatcatctcttttttgaattg 25071346  T
Q  868 cagaccacatatcaatgacctttatgttcatctcac 903  Q
    |||||||| |||||||| |||| || ||||||||||    
T  25071347 cagaccacgtatcaatggccttgattttcatctcac 25071382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 518 - 903
Target Start/End: Original strand, 25083904 - 25084288
Alignment:
Q  518 aatatatcaaggccagtctacatcttcagggaaaggcacattggagtaattaacagttgtcttcccatcaagagaaactatatcataaggtgaatcttct 617  Q
    ||||||||||||||| |||||| | ||||| |||||||||| |||| |||||| | || ||||||||||||||||||| ||||||||||| |||||||||    
T  25083904 aatatatcaaggccactctacaccatcaggaaaaggcacatcggagaaattaatatttatcttcccatcaagagaaaccatatcataaggagaatcttct 25084003  T
Q  618 ccaaattcaattggcattagcttccaatatagacttggttcccactctgcttctttgattacattcaatatttcctttgttactgtttcactcccctcat 717  Q
    |||||||||  |||||||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||| || ||||||||| ||||||||||||  |    
T  25084004 ccaaattcagctggcattaacttccaatatagacttggtttccactctgcttcttcgatgacattcaatatctcttttgttactatttcactccccttgt 25084103  T
Q  718 ttgatagatgaactccatcactaagaaataatcaaaccacctaattaaattacggagaaacaaatttgaaacattatagtttaggtgcaaataaatgaga 817  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||  || |||||||||||||| ||| ||| ||||||||| | ||||||||    
T  25084104 ttgatagatgaactccatcactaagaaataatcaaatcccctaattaaattattgataaacaaatttgaaatattttag-ttaggtgcatacaaatgaga 25084202  T
Q  818 ccatacttacatgaaacaaacatctctccaatcatctcttttctgaattgcagaccacatatcaatgacctttatgttcatctcac 903  Q
     | |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||||||||    
T  25084203 tcgtacttacacgaaacaaacatctctccaatcatctattttctgaattgcagaccacaaatcaatggcctttattttcatctcac 25084288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 519 - 806
Target Start/End: Original strand, 25089683 - 25089973
Alignment:
Q  519 atatatcaaggccagtctacatcttcagggaaaggcacattggagtaattaacagttgtcttcccatcaagagaaactatatcataaggtgaatcttctc 618  Q
    |||||||||||||| |||||| ||| ||| ||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  25089683 atatatcaaggccactctacaccttgaggaaaaggcacattggagaaattaacagttgtcttcccgtcaagagaaaccatatcataaggtgtatcttctc 25089782  T
Q  619 caaattcaattggcattagcttccaatatagacttggttcccactctgcttctttgattacattcaatatttcctttgttactgtttcactcccctcatt 718  Q
    ||||||||  |||||||| ||| ||||||||||||||||||||||||||||  || || ||||||||||| |||||||||||| |||||||||||||| |    
T  25089783 caaattcagctggcattaacttacaatatagacttggttcccactctgctttctttatgacattcaatatctcctttgttactatttcactcccctcagt 25089882  T
Q  719 tgatagatgaactccatcactaagaaataatcaaaccacctaattaa---attacggagaaacaaatttgaaacattatagtttaggtgca 806  Q
    ||||| ||| |||||||||||||||||||||||||||||| || |||   ||||  || |||||||||| ||||||| ||| |||||||||    
T  25089883 tgataaatgtactccatcactaagaaataatcaaaccaccaaactaaattattattgataaacaaatttaaaacattttagattaggtgca 25089973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 606 - 898
Target Start/End: Original strand, 25058166 - 25058464
Alignment:
Q  606 ggtgaatcttctccaaattcaattggcattagcttccaatatagacttggttcccactctgcttctttgattacattcaatatttcctttgttactgttt 705  Q
    |||||||||||||||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||| || || | |||||||||||  ||  |||    
T  25058166 ggtgaatcttctccaaattcaactggcattgtcttccaatatagatttggttcccactctgcttctttgataaccttaattatttcctttgacaccattt 25058265  T
Q  706 cactcccctcatttgatagatgaactccatcactaagaaataatcaaaccacctaattaaattacggagaaacaaatttgaaaca---tta-tagtttag 801  Q
    |||||||||||   || | ||||| ||||||||||| |||||| |||| || |||||||||| |  || |  ||||||||| | |   ||| || | |||    
T  25058266 cactcccctcagcagagaaatgaattccatcactaaaaaataaccaaatcatctaattaaatcattgaaatgcaaatttgatatatatttattaatatag 25058365  T
Q  802 gtgc--aaataaatgagaccatacttacatgaaacaaacatctctccaatcatctcttttctgaattgcagaccacatatcaatgacctttatgttcat 898  Q
    |  |  | ||| |||||| || ||||||||||||||||| ||| |||||||||||||| ||||||||  |||||||| ||||||| |||| ||||||||    
T  25058366 ggacatacatatatgagagcacacttacatgaaacaaacttctttccaatcatctcttctctgaattaaagaccacaaatcaatggccttgatgttcat 25058464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 814 - 903
Target Start/End: Original strand, 25090491 - 25090580
Alignment:
Q  814 gagaccatacttacatgaaacaaacatctctccaatcatctcttttctgaattgcagaccacatatcaatgacctttatgttcatctcac 903  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  25090491 gagatcatacttacatgaaacaaacatctttccaatcatctcttttctaaattgcagaccacatatcaatgacctttattttcatctcac 25090580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 26633268 - 26633417
Alignment:
Q  32 atgttacttctttttctttcttcggtacacgtttgagnnnnnnn-agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaa 130  Q
    |||||||||||||||||||||||||||||||| ||||        ||||||||||||| |||| ||||||||||| ||||||||| ||||  |   ||||    
T  26633268 atgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctggacataaatttgatgctataaaacc-accatcaa 26633366  T
Q  131 tttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  26633367 tttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaa 26633417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 32956678 - 32956829
Alignment:
Q  31 tatgttacttctttttctttcttcggtacacgtttgag--nnnnnnnagactctagttcttctttttggacataaatctgatgctatcaaacttattctc 128  Q
    ||||||||||||||||||||||||||||||||||||||         ||||||||||||| |||| ||||||||||||||||||||||||||  |  | |    
T  32956678 tatgttacttctttttctttcttcggtacacgtttgagtttttttttagactctagttctcctttctggacataaatctgatgctatcaaac-caccccc 32956776  T
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||| || ||||| || |||||| |||||  |||| ||||||||||||||||    
T  32956777 aatttttataatcatttaatcagtcaatttataaagttatttcattgaaagaa 32956829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 33909980 - 33910118
Alignment:
Q  44 tttctttcttcggtacacgtttgagnnnnnnn--agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatc 141  Q
    |||||||||||||||||||||||||         ||||||||||||| ||||||| ||||||||||||| |||||||| | |  |  |||||||| ||||    
T  33909980 tttctttcttcggtacacgtttgagtttttttctagactctagttctcctttttgtacataaatctgatcctatcaaa-tcacccctaatttgtataatc 33910078  T
Q  142 actttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
     ||| |||||| ||||||||||||||||||||||||||||    
T  33910079 gcttaatcagtcaatttgaaaagctatttcattgaaagaa 33910118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 36438462 - 36438361
Alignment:
Q  79 ctctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaa 178  Q
    |||||||||| |||| ||||||||||| ||||||||||||||  | | |||||||||| |||||||| |||||| |||||||||| | ||||||||||||    
T  36438462 ctctagttctactttctggacataaatttgatgctatcaaacc-actatcaatttgtataatcacttaatcagtcaatttgaaaaaccatttcattgaaa 36438364  T
Q  179 gaa 181  Q
    |||    
T  36438363 gaa 36438361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 41908080 - 41908232
Alignment:
Q  31 tatgttacttctttttctttcttcggtacacgtttgagnnnnnnna--gactctagttcttcttttt-ggacataaatctgatgctatcaaacttattct 127  Q
    |||||||||||||||||||||||||||||| |||||||          |||||| |||||  ||||| |||||||||||||||||| ||||||    ||     
T  41908080 tatgttacttctttttctttcttcggtacatgtttgagtttttttcttgactctggttctcattttttggacataaatctgatgctttcaaaccacctc- 41908178  T
Q  128 caatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||||||||||||| |||||| |||| |||||||| ||||||||||||||    
T  41908179 caatttgtacaatcacttaatcagtcaattagaaaagctgtttcattgaaagaa 41908232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 34 - 181
Target Start/End: Original strand, 30739029 - 30739177
Alignment:
Q  34 gttacttctttttctttcttcggtacacgtttgagnnnnnnn--agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaat 131  Q
    ||||||||||||||||| |||||||||||||||||         ||| || | |||| |||| |||||||||||| |||||||||||||  ||  |||||    
T  30739029 gttacttctttttcttttttcggtacacgtttgagtttttttctagattccaattctcctttctggacataaatcggatgctatcaaacc-atcttcaat 30739127  T
Q  132 ttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    || || |||||||| |||||| ||||||||||| ||||||||| ||||||    
T  30739128 ttttataatcacttaatcagtcaatttgaaaagttatttcattaaaagaa 30739177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 40001810 - 40001706
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||| |||||||||| | || ||||||||||| | |||||||||    || ||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  40001810 agactttagttcttctatctgaacataaatctggtactatcaaaccacctc-caatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 40001712  T
Q  176 aaagaa 181  Q
    ||||||    
T  40001711 aaagaa 40001706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 40738103 - 40738001
Alignment:
Q  78 actctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaa 177  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||  |   |||||||||| ||| |||| |||||| ||||| ||||||||||| ||||||    
T  40738103 actctagttctacttttttgacataaatttgatgctatcaaacc-accatcaatttgtataattacttaatcagtcaatttaaaaagctattttattgaa 40738005  T
Q  178 agaa 181  Q
    ||||    
T  40738004 agaa 40738001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 26282605 - 26282552
Alignment:
Q  128 caatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  26282605 caatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaa 26282552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 46221817 - 46221713
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||||||||||  |||||| |||||||||  || ||||||||||    || |||||||| |||||||| |||||| |||||| |||||||||||||||    
T  46221817 agactctagttctcttttttgtacataaatcgaatcctatcaaactacccct-aatttgtagaatcacttaatcagtcaatttggaaagctatttcattg 46221719  T
Q  176 aaagaa 181  Q
    ||||||    
T  46221718 aaagaa 46221713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 42161182 - 42161130
Alignment:
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| |||||||| ||||||||||||| |||||||||||||||||||||    
T  42161182 aatttgtataatcacttgatcagttaatttggaaagctatttcattgaaagaa 42161130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 9479079 - 9479181
Alignment:
Q  78 actctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaa 177  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||  |   |||||||||| ||| |||| |||||| ||||| |||| ||||||| |||||    
T  9479079 actctagttctactttctggacataaatttgatgctatcaaac-caccatcaatttgtataattacttaatcagtcaatttaaaaaactatttcgttgaa 9479177  T
Q  178 agaa 181  Q
    ||||    
T  9479178 agaa 9479181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 181
Target Start/End: Complemental strand, 773979 - 773894
Alignment:
Q  95 tggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||| |||||||||||||||||||| | |  |  |||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||    
T  773979 tggaaataaatctgatgctatcaaa-tcacccctaatttgtataattactttatcagtcaatttgaaaagctattttattgaaagaa 773894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 33419232 - 33419127
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcacttta-tcagttaatttgaaaagctatttcatt 174  Q
    |||||||||||||| |||||| ||||||||| ||| ||||||||| ||  |  |||||||| |||||||| | | ||| ||||||||||| |||||||||    
T  33419232 agactctagttcttgtttttgtacataaatcggatcctatcaaac-tacccctaatttgtataatcacttaattaagtcaatttgaaaagttatttcatt 33419134  T
Q  175 gaaagaa 181  Q
    |||||||    
T  33419133 gaaagaa 33419127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 6380198 - 6380094
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||||||||||| |||| |||||||| |||||||||  |  |  |||||||| |||||||| |||| | |||||| ||  |||||||||||    
T  6380198 agactctagttcttctttttgtacatgaatctgatcctatcaaac-cacccctaatttgtataatcacttaatcaatcaatttggaagtctatttcattg 6380100  T
Q  176 aaagaa 181  Q
    ||||||    
T  6380099 aaagaa 6380094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 7636440 - 7636336
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||||| |||| | ||||| |||||| |||||| |||||||||     || |||||||| ||| |||| |||||| ||||||||||||||||||||||    
T  7636440 agactctacttctcccttttgtacataactctgatcctatcaaaccacccct-aatttgtataattacttaatcagtcaatttgaaaagctatttcattg 7636342  T
Q  176 aaagaa 181  Q
    ||||||    
T  7636341 aaagaa 7636336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 18015696 - 18015592
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||| | ||||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||| | |||||| |||||||||||||||    
T  18015696 agactctagttttcctttttgtacataaatcggatcctatcaaaccacccct-aatttgtataatcacttaatcaatcaatttggaaagctatttcattg 18015598  T
Q  176 aaagaa 181  Q
    ||||||    
T  18015597 aaagaa 18015592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 36796482 - 36796382
Alignment:
Q  80 tctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaag 179  Q
    ||||||||| ||||||| ||||||||| ||| |||||||||| |  || |||||||| ||| |||| |||||| |||||| |||  ||||||||||||||    
T  36796482 tctagttctcctttttgtacataaatcggatcctatcaaact-acccttaatttgtataataacttaatcagtcaatttggaaaattatttcattgaaag 36796384  T
Q  180 aa 181  Q
    ||    
T  36796383 aa 36796382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 42311960 - 42312063
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||||| ||||  ||| ||||||||||||||||| || |||||| |  ||| ||||||| |||||||| || ||| |||||||||||||||||||||     
T  42311960 agactctaattctcttttctggacataaatctgatgtta-caaact-accctcgatttgtataatcacttgattagtcaatttgaaaagctatttcatta 42312057  T
Q  176 aaagaa 181  Q
    ||||||    
T  42312058 aaagaa 42312063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 4099970 - 4100022
Alignment:
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| |||||||| |||| | ||||||||||||||||||||||||||||    
T  4099970 aatttgtataatcacttaatcaatcaatttgaaaagctatttcattgaaagaa 4100022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 812 - 901
Target Start/End: Original strand, 25094670 - 25094759
Alignment:
Q  812 atgagaccatacttacatgaaacaaacatctctccaatcatctcttttctgaattgcagaccacatatcaatgacctttatgttcatctc 901  Q
    |||||| || |||||| |||| ||||||| || ||| | ||| ||||| || ||||||||||||| ||||||| |||| || ||||||||    
T  25094670 atgagagcaaacttacgtgaagcaaacatttcgccagttatcccttttttggattgcagaccacagatcaatggccttgatattcatctc 25094759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 7e-27; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 32098338 - 32098188
Alignment:
Q  31 tatgttacttctttttctttcttcggtacacgtttgagnnnnnnn-agactctagttcttctttttggacataaatctgatgctatcaaacttattctca 129  Q
    |||||||||||||||||||||||| |||||||||||||        ||||||||||| | |||||||||||||||| ||||||||||||||  | ||| |    
T  32098338 tatgttacttctttttctttcttcagtacacgtttgagttttttctagactctagttatcctttttggacataaatttgatgctatcaaac-cactctta 32098240  T
Q  130 atttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||  ||||||| |||||| |||||| ||| |||||||||||||||||    
T  32098239 atttgtatgatcacttaatcagtcaatttggaaaactatttcattgaaagaa 32098188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 18420723 - 18420619
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||  |  || |||||||| |||||||| |||||| ||||||||||||| ||||||||    
T  18420723 agactctagttctcctttttgtacataaatcagatcctatcaaacc-acacttaatttgtataatcacttaatcagtcaatttgaaaagctgtttcattg 18420625  T
Q  176 aaagaa 181  Q
    ||||||    
T  18420624 aaagaa 18420619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 34524065 - 34523961
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||| ||||||| || | |||||||||||||| | |||||||||  |  | ||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  34524065 agactttagttctcctatctggacataaatctggtactatcaaacc-acccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 34523967  T
Q  176 aaagaa 181  Q
    ||||||    
T  34523966 aaagaa 34523961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 43968184 - 43968080
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||   | || |||||||| |||||||| |||| | ||||||||||| ||||||||||    
T  43968184 agactctagttctcctttttgtacataaatcggatcctatcaaaccactcct-aatttgtataatcacttaatcaatcaatttgaaaagttatttcattg 43968086  T
Q  176 aaagaa 181  Q
    ||||||    
T  43968085 aaagaa 43968080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 30915402 - 30915305
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcatt 174  Q
    |||||||| |||| |||| |||||||| ||||||||||| ||||| |  || |||| |||| |||||||| |||||| |||||||||||||||||||||    
T  30915402 agactctaattctcctttctggacatagatctgatgctaccaaacctcctc-caatatgtataatcacttaatcagtcaatttgaaaagctatttcatt 30915305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 3471554 - 3471654
Alignment:
Q  80 tctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaag 179  Q
    |||||||||  |||||| |||||||| |||| |||||||||     || |||||||| |||||||| |||||| ||||||||||||||||||||||||||    
T  3471554 tctagttctcatttttgtacataaatgtgattctatcaaaccacccct-aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaag 3471652  T
Q  180 aa 181  Q
    ||    
T  3471653 aa 3471654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 43926437 - 43926333
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| | ||||||| ||| |||||||||  |  |  |||||||| ||| |||| |||||| ||||||||||||||||||||||    
T  43926437 agactctagttctactttttgtatataaatcggatcctatcaaacc-acccataatttgtataattacttaatcagtcaatttgaaaagctatttcattg 43926339  T
Q  176 aaagaa 181  Q
    ||||||    
T  43926338 aaagaa 43926333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 3628861 - 3628757
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| | || ||| ||||||| ||||||||||||||  |   | |||||||| |||||| | |||||| ||||||||||| ||||||||||    
T  3628861 agactctagttctacattctggtcataaatttgatgctatcaaacc-accattaatttgtataatcacataatcagtcaatttgaaaagttatttcattg 3628763  T
Q  176 aaagaa 181  Q
    ||||||    
T  3628762 aaagaa 3628757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 5869385 - 5869332
Alignment:
Q  128 caatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||| || |||||||| |||||| ||||||||||||||||||||||||||||    
T  5869385 caatttttaaaatcacttaatcagtcaatttgaaaagctatttcattgaaagaa 5869332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 42951883 - 42951779
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||||||||||  |||||| |||||||||  || |||||||||   | || |||||||| |||||||| |||||| ||||||||||| ||||| ||||    
T  42951883 agactctagttctcatttttgtacataaatcgaatcctatcaaaccactcct-aatttgtataatcacttaatcagtcaatttgaaaagttattttattg 42951785  T
Q  176 aaagaa 181  Q
    ||||||    
T  42951784 aaagaa 42951779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 12531560 - 12531613
Alignment:
Q  128 caatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||||||| |||||||| |||||| ||||| |||| |||||||||||||||||    
T  12531560 caatttgtataatcacttaatcagtcaatttaaaaatctatttcattgaaagaa 12531613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 13585249 - 13585353
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||| |  |||||| ||||||||| ||| |||||||||     || |||||||| ||||| || |||||| |||||| |||||||||||||||    
T  13585249 agactctagttttcttttttgtacataaatcagatcctatcaaaccacccct-aatttgtataatcaattaatcagtcaatttggaaagctatttcattg 13585347  T
Q  176 aaagaa 181  Q
    ||||||    
T  13585348 aaagaa 13585353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 23567337 - 23567286
Alignment:
Q  128 caatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaag 179  Q
    ||||||||| |||||||| |||||| |||||||||  |||||||||||||||    
T  23567337 caatttgtataatcacttaatcagtcaatttgaaatactatttcattgaaag 23567286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 39698001 - 39697948
Alignment:
Q  128 caatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||||  |||| || || ||| ||||||||||||||||||||||||||||    
T  39698001 caatttgtatgatcatttaattagtcaatttgaaaagctatttcattgaaagaa 39697948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 41666098 - 41666061
Alignment:
Q  31 tatgttacttctttttctttcttcggtacacgtttgag 68  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  41666098 tatgttacttcatcttctttcttcggtacacgtttgag 41666061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 1e-22; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 40956263 - 40956367
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctc-aatttgtacaatcactttatcagttaatttgaaaagctatttcatt 174  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||  |||||| |||||||| |||||||| |||| |||||||||||| ||||||||||    
T  40956263 agactctagttctcctttgtggacataaatctgatgcaatcaaac--attctccaatttgtataatcacttaatcatttaatttgaaaaactatttcatt 40956360  T
Q  175 gaaagaa 181  Q
     ||||||    
T  40956361 aaaagaa 40956367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 76 - 178
Target Start/End: Original strand, 138094 - 138195
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||  |   |||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  138094 agactctagttctacttttcggacataaatttgatgctatcaaacc-accatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 138192  T
Q  176 aaa 178  Q
    |||    
T  138193 aaa 138195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 19099428 - 19099324
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||| ||||||| ||||||| ||||||||||||| |||||||||  || |  |||||||| |||||||| |||||| ||||| ||||||||||||||||    
T  19099428 agactatagttctcctttttgtacataaatctgatcctatcaaacc-atccctaatttgtataatcacttaatcagtcaatttaaaaagctatttcattg 19099330  T
Q  176 aaagaa 181  Q
    ||||||    
T  19099329 aaagaa 19099324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 27351253 - 27351403
Alignment:
Q  31 tatgttacttctttttctttcttcggtacacgtttgagnnnnnnn-agactctagttcttctttttggacataaatctgatgctatcaaacttattctca 129  Q
    ||||||||||| |||||||||||| ||| |||||||||        ||||||||||||| |||| || |||||||| || |||||||||||    || ||    
T  27351253 tatgttacttccttttctttcttcagtatacgtttgagatttttctagactctagttctcctttctgaacataaatttggtgctatcaaaccacctc-ca 27351351  T
Q  130 atttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||||| || ||||| |||||| |||||| |||| ||||||||||||||||    
T  27351352 atttgtataaccacttaatcagtcaatttggaaagttatttcattgaaagaa 27351403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 10591336 - 10591283
Alignment:
Q  128 caatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||||||||||||    
T  10591336 caatttgtataatcacttaatcagttaatttgaaaagttatttcattgaaagaa 10591283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 13423814 - 13423918
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||||||||||  |||||| ||||||||| ||| |||||||||  ||||  |||||||| |||||||| |||| | |||||  |||||||||||||||    
T  13423814 agactctagttctcttttttgtacataaatcggatcctatcaaacc-attcctaatttgtataatcacttaatcaatcaatttagaaagctatttcattg 13423912  T
Q  176 aaagaa 181  Q
    ||||||    
T  13423913 aaagaa 13423918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 43511568 - 43511672
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||| ||||||| || | |||||||||||||| | |||||||||  |  | ||||||||| |||||||| |||||| |||||||||||||||||||| |    
T  43511568 agactttagttctcctatctggacataaatctggtactatcaaacc-acccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcatgg 43511666  T
Q  176 aaagaa 181  Q
    ||||||    
T  43511667 aaagaa 43511672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 20975986 - 20976039
Alignment:
Q  128 caatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||||||| ||||| || |||||| ||||||||||||||||||||||||||||    
T  20975986 caatttgtataatcatttaatcagtcaatttgaaaagctatttcattgaaagaa 20976039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 42291944 - 42291891
Alignment:
Q  128 caatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||||||| |||||||| |||||| |||||||||| |||||||||||||||||    
T  42291944 caatttgtataatcacttaatcagtcaatttgaaaatctatttcattgaaagaa 42291891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 13656212 - 13656264
Alignment:
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||||||||||||    
T  13656212 aatttgtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaa 13656264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 13474582 - 13474684
Alignment:
Q  78 actctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaa 177  Q
    |||||||||||  |||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||||| ||||||||||| | ||||||||||    
T  13474582 actctagttctcttttttgtacataaatcggatcctatcaaaccacccct-aatttgtataatcacttaatcagtcaatttgaaaagttgtttcattgaa 13474680  T
Q  178 agaa 181  Q
    ||||    
T  13474681 agaa 13474684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 17325794 - 17325899
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaag-ctatttcatt 174  Q
    ||||||||||||  |||| ||||||||||| ||||||||| ||||| |   || ||||| | |||||||| |||||| ||||||||||  ||||||||||    
T  17325794 agactctagttccactttctggacataaatttgatgctattaaact-accatcgatttgaataatcacttaatcagtcaatttgaaaaaactatttcatt 17325892  T
Q  175 gaaagaa 181  Q
    |||||||    
T  17325893 gaaagaa 17325899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 17513999 - 17513946
Alignment:
Q  128 caatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||||||| |||||||| |||||| ||||||||||| ||||||| ||||||||    
T  17513999 caatttgtataatcacttaatcagtcaatttgaaaagttatttcactgaaagaa 17513946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 12661311 - 12661363
Alignment:
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| |||||||| | |||| |||||| |||||||||||||||||||||    
T  12661311 aatttgtataatcacttaaccagtcaatttggaaagctatttcattgaaagaa 12661363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 18873459 - 18873511
Alignment:
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| || ||||| |||||  ||||||||||||||||||||||||||||    
T  18873459 aatttgtataaccacttaatcagccaatttgaaaagctatttcattgaaagaa 18873511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 29156192 - 29156244
Alignment:
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| |||||||| |||||| ||||| ||||| ||||||||||||||||    
T  29156192 aatttgtataatcacttaatcagtcaatttaaaaagttatttcattgaaagaa 29156244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 66
Target Start/End: Original strand, 23069124 - 23069159
Alignment:
Q  31 tatgttacttctttttctttcttcggtacacgtttg 66  Q
    ||||||||||||||||||||||||| ||||||||||    
T  23069124 tatgttacttctttttctttcttcgttacacgtttg 23069159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 5829335 - 5829437
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||| ||||||| || | | |||||||||||| | |||||||||  |  ||||||||||| |||||||| |||||| |||||  ||||||||||||||     
T  5829335 agactttagttctcctatcttgacataaatctggtactatcaaaccaac-ctcaatttgtataatcacttaatcagtcaattt--aaagctatttcatta 5829431  T
Q  176 aaagaa 181  Q
    ||||||    
T  5829432 aaagaa 5829437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 4734645 - 4734592
Alignment:
Q  128 caatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||||||| |||| ||| |||| | |||||||||| |||||||||||||||||    
T  4734645 caatttgtataatcccttgatcactcaatttgaaaatctatttcattgaaagaa 4734592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 8379681 - 8379644
Alignment:
Q  31 tatgttacttctttttctttcttcggtacacgtttgag 68  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  8379681 tatgttatttctttttctttcttcggtacacatttgag 8379644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 1e-22; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 31 - 174
Target Start/End: Complemental strand, 40152290 - 40152147
Alignment:
Q  31 tatgttacttctttttctttcttcggtacacgtttgagnnnnnnn-agactctagttcttctttttggacataaatctgatgctatcaaacttattctca 129  Q
    |||||||||||||||| |||||||||||||||||||||        |||||||| ||||||||||| |||||| ||||||||||| |||| | || | ||    
T  40152290 tatgttacttctttttttttcttcggtacacgtttgagttttttttagactctaattcttctttttagacatagatctgatgctaccaaa-tcatcccca 40152192  T
Q  130 atttgtacaatcactttatcagttaatttgaaaagctatttcatt 174  Q
    ||||||| |||||||| ||| || |||||||||| ||||||||||    
T  40152191 atttgtataatcacttaatcggtcaatttgaaaaactatttcatt 40152147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 7767013 - 7767117
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||| |||||| |||| ||||||||||| ||||||||||||||  |   |||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  7767013 agactccagttctactttctggacataaatttgatgctatcaaaca-accatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 7767111  T
Q  176 aaagaa 181  Q
    ||||||    
T  7767112 aaagaa 7767117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 19965992 - 19965890
Alignment:
Q  78 actctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaa 177  Q
    |||||| |||| |||||||||||||||||||||||||||||||  | |  ||||||||| |||||||| || |||||| |||||||||||||||||| ||    
T  19965992 actctaattctcctttttggacataaatctgatgctatcaaac-cactgccaatttgtataatcacttaattagttaaattgaaaagctatttcattaaa 19965894  T
Q  178 agaa 181  Q
    ||||    
T  19965893 agaa 19965890  T

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Target: chr3; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 21784898 - 21784794
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||     || |||||||| |||||||| ||||||||||||| |||||||||||||||    
T  21784898 agactctagttctcctttttgtacataaatcggatcctatcaaaccacccct-aatttgtataatcacttaatcagttaatttggaaagctatttcattg 21784800  T
Q  176 aaagaa 181  Q
    ||||||    
T  21784799 aaagaa 21784794  T

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Target: chr3; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 25599200 - 25599096
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    ||| ||||| || |||||||| |||||| |||||||||| |||||||||||    
T  25599200 agactctagttctcctttttgtacataaatctgattctatcaaaccacctct-aatttatataatcacttaatcagtcaatttgaaaaactatttcattg 25599102  T
Q  176 aaagaa 181  Q
    ||||||    
T  25599101 aaagaa 25599096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 28132849 - 28132745
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||| | |  || |||||||| |||||||| |||||| |||||| |||||||||||||||    
T  28132849 agactctagttctcctttttgtacataaatcagatcctatcaaa-tcacccttaatttgtataatcacttaatcagtcaatttggaaagctatttcattg 28132751  T
Q  176 aaagaa 181  Q
    ||||||    
T  28132750 aaagaa 28132745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 41707169 - 41707065
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||     || |||||| | |||||||| |||||| ||||||||||||||||||||||    
T  41707169 agactctagttctcctttttgtacataaatcggatcctatcaaaccacccct-aatttgcataatcacttaatcagtcaatttgaaaagctatttcattg 41707071  T
Q  176 aaagaa 181  Q
    ||||||    
T  41707070 aaagaa 41707065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 42009376 - 42009272
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||| ||||||| |||| ||||||||||| ||||||||||||||  |   |||||||||| |||||||| |||||| ||||| ||||| ||||||||||    
T  42009376 agactttagttctactttctggacataaatttgatgctatcaaacc-accatcaatttgtataatcacttaatcagtcaatttaaaaagttatttcattg 42009278  T
Q  176 aaagaa 181  Q
    ||||||    
T  42009277 aaagaa 42009272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 51939670 - 51939566
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||||||||||  |||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||||| ||||||||||||||||||||||    
T  51939670 agactctagttctcttttttgtacataaatcagatcctatcaaaccacccct-aatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 51939572  T
Q  176 aaagaa 181  Q
    ||||||    
T  51939571 aaagaa 51939566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 13401411 - 13401513
Alignment:
Q  78 actctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaa 177  Q
    ||||||||||| ||||||| ||||| ||  ||| |||||||||  | ||| |||||||| |||||||| |||||| |||||||||||||||||||||| |    
T  13401411 actctagttctcctttttgtacatacattcgatcctatcaaacc-actcttaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgga 13401509  T
Q  178 agaa 181  Q
    ||||    
T  13401510 agaa 13401513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 36538298 - 36538196
Alignment:
Q  78 actctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaa 177  Q
    ||||||||| | |||| ||||||||||  ||||||||||||||  |   |||||||||| |||||||| |||||| |||||||||| |||||||||||||    
T  36538298 actctagttatactttatggacataaacttgatgctatcaaacc-accatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaa 36538200  T
Q  178 agaa 181  Q
    ||||    
T  36538199 agaa 36538196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 174
Target Start/End: Original strand, 21596285 - 21596382
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcatt 174  Q
    |||||||| |||| |||| |||||||||||| |||||||||||||  | || ||||||||| |||||||| ||||||  ||||| ||||||||||||||    
T  21596285 agactctaattctcctttctggacataaatcagatgctatcaaac-cactcccaatttgtataatcacttaatcagtcgatttggaaagctatttcatt 21596382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 54430505 - 54430606
Alignment:
Q  79 ctctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaa 178  Q
    |||||||||| ||||||| |||||||||||||| ||||||||     || |||||||| |||||||| |||||| ||||||||||| ||||||||| |||    
T  54430505 ctctagttctcctttttgtacataaatctgatgttatcaaaccacccct-aatttgtataatcacttaatcagtcaatttgaaaagttatttcattaaaa 54430603  T
Q  179 gaa 181  Q
    |||    
T  54430604 gaa 54430606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 27303137 - 27303241
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||||| |||| |||| ||||||||||| |||||| || ||||  |   |||||||||| |||||||| |||| | ||||||||||||||||||||||    
T  27303137 agactctacttctactttatggacataaatttgatgccatgaaacc-accatcaatttgtataatcacttaatcaatcaatttgaaaagctatttcattg 27303235  T
Q  176 aaagaa 181  Q
    ||||||    
T  27303236 aaagaa 27303241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 29387868 - 29387764
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||| | ||||||||||| ||||||||||    
T  29387868 agactctagttctcctttttgtacataaatcggatcctatcaaaccacccct-aatttgtataatcacttaatcaatcaatttgaaaagttatttcattg 29387770  T
Q  176 aaagaa 181  Q
    ||||||    
T  29387769 aaagaa 29387764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 52655237 - 52655133
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| | ||||||| ||| |||||||||     || |||||||| |||||||| |||||| |||||| |||||||||||||||    
T  52655237 agactctagttctcctttttgtatataaatcggatcctatcaaaccaccact-aatttgtataatcacttaatcagtcaatttggaaagctatttcattg 52655139  T
Q  176 aaagaa 181  Q
    ||||||    
T  52655138 aaagaa 52655133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 181
Target Start/End: Complemental strand, 1255158 - 1255060
Alignment:
Q  82 tagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||||||||||||||||||||||||||||||||||  |   | |||||||| ||| |||| ||| || |||||  |||| ||||||||||||||||    
T  1255158 tagttcttctttttggacataaatctgatgctatcaaac-gacctttaatttgtataatgacttaatcggtcaatttagaaagttatttcattgaaagaa 1255060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 8364122 - 8364226
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||| ||||| ||||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||||| |||||| |||| ||||||||||    
T  8364122 agactcttgttctcctttttgtacataaatcggatcctatcaaaccacccct-aatttgtataatcacttaatcagtcaatttggaaagttatttcattg 8364220  T
Q  176 aaagaa 181  Q
    ||||||    
T  8364221 aaagaa 8364226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 23164686 - 23164582
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||  |  |  |||||||| |||||||| |||| | |||||| ||  |||||||||||    
T  23164686 agactctagttctcctttttgtacataaatctgatcctatcaaac-cacccctaatttgtataatcacttaatcaatcaatttggaagtctatttcattg 23164588  T
Q  176 aaagaa 181  Q
    ||||||    
T  23164587 aaagaa 23164582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 48627092 - 48627039
Alignment:
Q  128 caatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||||||| |||||||| |||||| |||||||||| |||||||||||||||||    
T  48627092 caatttgtataatcacttgatcagtcaatttgaaaatctatttcattgaaagaa 48627039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 43905957 - 43905862
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttca 172  Q
    ||||| ||||||| || | |||||||||||||| | |||||||||| |  ||||||||||| |||||||  |||||| ||||||||||| |||||||    
T  43905957 agactttagttctcctatctggacataaatctggtactatcaaact-accctcaatttgtataatcactcaatcagtcaatttgaaaagttatttca 43905862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 50677378 - 50677327
Alignment:
Q  127 tcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaa 178  Q
    |||||||||| |||||||| |||||| |||||||||| ||||||||||||||    
T  50677378 tcaatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaa 50677327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 46904742 - 46904796
Alignment:
Q  127 tcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||||| |||||||| |||||| ||||| |||| |||||||||||||||||    
T  46904742 tcaatttgtataatcacttaatcagtcaatttaaaaaactatttcattgaaagaa 46904796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 18408141 - 18408245
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||| |||||||  |||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||||| |||||||||||||| | |||||    
T  18408141 agactttagttctcatttttgtacataaatcggatcctatcaaaccacccct-aatttgtataatcacttaatcagtcaatttgaaaagctaatccattg 18408239  T
Q  176 aaagaa 181  Q
    ||||||    
T  18408240 aaagaa 18408245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 20762052 - 20762103
Alignment:
Q  130 atttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||||| |||||||| ||||||||||||| ||  |||||||||||||||||    
T  20762052 atttgtataatcacttgatcagttaatttggaagtctatttcattgaaagaa 20762103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 1255219 - 1255182
Alignment:
Q  31 tatgttacttctttttctttcttcggtacacgtttgag 68  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  1255219 tatgttacttcttcttctttcttcggtacatgtttgag 1255182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 4e-22; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 27703689 - 27703539
Alignment:
Q  31 tatgttacttctttttctttcttcggtacacgtttgagnnnnnnn-agactctagttcttctttttggacataaatctgatgctatcaaacttattctca 129  Q
    |||||||||||||||||||||||  |||||||||||||        |||||||||||||  |||||| |||||||| ||||||||||||||  |  | ||    
T  27703689 tatgttacttctttttctttctttagtacacgtttgagttttttctagactctagttctcttttttgaacataaatttgatgctatcaaacc-accccca 27703591  T
Q  130 atttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||||| |||||||| |||||| |||||| ||||||||||||| |||||||    
T  27703590 atttgtataatcacttaatcagtcaatttggaaagctatttcatcgaaagaa 27703539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 25930554 - 25930656
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||||||||||  |||||| ||||||||||||| ||||||||||    || |||||||| |||||||| |||||| || |||||||||||||||||||    
T  25930554 agactctagttctcatttttgtacataaatctgatcctatcaaactacccct-aatttgtataatcacttaatcagtcaacttgaaaagctatttcattg 25930652  T
Q  176 aaag 179  Q
    ||||    
T  25930653 aaag 25930656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 30005015 - 30004917
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||||| |||| ||||||| ||||||||| ||| |||||||||       ||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  30005015 agactctacttctcctttttgtacataaatccgatcctatcaaac-------caatttgtataatcacttaatcaattaatttgaaaagctatttcattg 30004923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 5560388 - 5560537
Alignment:
Q  32 atgttacttctttttctttcttcggtacacgtttgagnnnnnnn-agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaa 130  Q
    ||||||||| ||||||||||||| |||||||||||||        ||||| |||||||  ||| |||||||||||||| ||||| |||||  |  | |||    
T  5560388 atgttacttttttttctttcttcagtacacgtttgagatttttttagactatagttctcatttctggacataaatctggtgctaccaaacc-acccccaa 5560486  T
Q  131 tttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||| |||||||| |||||| ||||| ||||| ||||||||||||||||    
T  5560487 tttgtataatcacttaatcagtcaatttaaaaagttatttcattgaaagaa 5560537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 37873876 - 37873772
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| |||| | ||||||||| ||||||||||||||  |   |||||||||| | |||||| ||||||||||||||||| || ||||||||    
T  37873876 agactctagttctactttctagacataaatttgatgctatcaaacc-accatcaatttgtatagtcacttaatcagttaatttgaaaaactgtttcattg 37873778  T
Q  176 aaagaa 181  Q
    ||||||    
T  37873777 aaagaa 37873772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 50371084 - 50371188
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| |||| |||| |||||  ||||||||||||| | |  ||||||||||| |||||||| |||||| |||||||||| || ||||||||    
T  50371084 agactctagttctcctttctggatataaagttgatgctatcaaa-tcaccctcaatttgtataatcacttaatcagtcaatttgaaaaactgtttcattg 50371182  T
Q  176 aaagaa 181  Q
    ||||||    
T  50371183 aaagaa 50371188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 6150671 - 6150775
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||     || ||||| || ||||| || |||||| ||||||||||||||||||||||    
T  6150671 agactctagttctcctttttgtacataaatcagatcctatcaaaccacccct-aatttatataatcatttaatcagtcaatttgaaaagctatttcattg 6150769  T
Q  176 aaagaa 181  Q
    ||||||    
T  6150770 aaagaa 6150775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 12884251 - 12884147
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||| | ||||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||||| ||||| ||||||||||||||||    
T  12884251 agactctagttttcctttttgtacataaatcggatcctatcaaaccacccct-aatttgtataatcacttaatcagtcaatttaaaaagctatttcattg 12884153  T
Q  176 aaagaa 181  Q
    ||||||    
T  12884152 aaagaa 12884147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 12971356 - 12971460
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||| ||||||| || | ||||||||||||||||  ||||||||  |  | ||||||||| |||||||| |||||| |||||||||||||||||||| |    
T  12971356 agactttagttctcctatctggacataaatctgatattatcaaacc-acccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcatcg 12971454  T
Q  176 aaagaa 181  Q
    ||||||    
T  12971455 aaagaa 12971460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 30899606 - 30899710
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||| | |  |  |||||||| |||||||| || ||| |||||| |||||||||||||||    
T  30899606 agactctagttctcctttttgtacataaatcggatcctatcaaa-tcacccctaatttgtataatcacttaattagtcaatttggaaagctatttcattg 30899704  T
Q  176 aaagaa 181  Q
    ||||||    
T  30899705 aaagaa 30899710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 42740060 - 42740164
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| |||| ||||||||| | ||||||||||||||  |   |||||||||| ||| |||| || ||| |||||||||| |||||||||||    
T  42740060 agactctagttctactttctggacataagtttgatgctatcaaaca-accatcaatttgtataataacttaattagtcaatttgaaaaactatttcattg 42740158  T
Q  176 aaagaa 181  Q
    ||||||    
T  42740159 aaagaa 42740164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 50552445 - 50552549
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||     || |||||||| |||||||| ||| || ||||||||||| ||||||||||    
T  50552445 agactctagttctcctttttgtacataaatcggatcctatcaaaccacccct-aatttgtataatcacttaatcggtcaatttgaaaagttatttcattg 50552543  T
Q  176 aaagaa 181  Q
    ||||||    
T  50552544 aaagaa 50552549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 52055502 - 52055606
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| |||||||||| ||  ||||||||| || |  ||||| || |||||||| |||| | |||||| |||||||||||||||    
T  52055502 agactctagttctcctttttgtacataaatctaatcatatcaaact-atccataatttatataatcacttaatcaatcaatttggaaagctatttcattg 52055600  T
Q  176 aaagaa 181  Q
    ||||||    
T  52055601 aaagaa 52055606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 174
Target Start/End: Original strand, 15441194 - 15441337
Alignment:
Q  31 tatgttacttctttttctttcttcggtacacgtttgag-nnnnnnnagactctagttcttctttttggacataaatctgatgctatcaaacttattctca 129  Q
    ||||||||||||||||||||||||| ||||||||||||        ||||||||||||| |||| | ||||||||| | ||||||||||||  |    ||    
T  15441194 tatgttacttctttttctttcttcgatacacgtttgagttttttctagactctagttctcctttctagacataaatataatgctatcaaac-cacctaca 15441292  T
Q  130 atttgtacaatcactttatcagttaatttgaaaagctatttcatt 174  Q
    ||||||| |||||||| |||| | |||||  ||||||||||||||    
T  15441293 atttgtataatcacttaatcactcaatttataaagctatttcatt 15441337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 22386901 - 22386847
Alignment:
Q  127 tcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| |||||||||| |||||| |||||||||| |||||||||||||||||    
T  22386901 tcaatttgaacaatcacttaatcagtcaatttgaaaaactatttcattgaaagaa 22386847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 10109670 - 10109774
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||  ||| |||||||||     || |||||||| |||||||| |||||| |||||| ||||| |||||||||    
T  10109670 agactctagttctcctttttgtacataaattggatcctatcaaaccaccact-aatttgtataatcacttaatcagtcaatttggaaagcaatttcattg 10109768  T
Q  176 aaagaa 181  Q
    ||||||    
T  10109769 aaagaa 10109774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 14084815 - 14084711
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||| | |  |  ||  |||| |||||||| |||||| |||||  |||||||||||||||    
T  14084815 agactctagttctcctttttgtacataaatctgatcctatcaaa-tcacccctaaaatgtataatcacttaatcagtcaatttagaaagctatttcattg 14084717  T
Q  176 aaagaa 181  Q
    ||||||    
T  14084716 aaagaa 14084711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 18127999 - 18127947
Alignment:
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||| |||||    
T  18127999 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgcaagaa 18127947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 33124692 - 33124640
Alignment:
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| |||||||| || ||| ||||||||||||||||||||||||||||    
T  33124692 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaa 33124640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 17674418 - 17674364
Alignment:
Q  127 tcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| | |||||||| |||||| |||||||||| |||||||||||||||||    
T  17674418 tcaatttgaataatcacttaatcagtcaatttgaaaaactatttcattgaaagaa 17674364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 178
Target Start/End: Complemental strand, 48722484 - 48722383
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||||| ||||  |||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||||| |||||| |||||||||||||||    
T  48722484 agactctatttctcatttttgtacataaatcggatcctatcaaaccacccct-aatttgtataatcacttaatcagtcaatttggaaagctatttcattg 48722386  T
Q  176 aaa 178  Q
    |||    
T  48722385 aaa 48722383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 6333676 - 6333639
Alignment:
Q  31 tatgttacttctttttctttcttcggtacacgtttgag 68  Q
    |||||||||| |||||||||||||||||||||||||||    
T  6333676 tatgttacttatttttctttcttcggtacacgtttgag 6333639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 13120928 - 13120876
Alignment:
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||| | |||||||| |||||| |||||||||| |||||||||||||||||    
T  13120928 aatttgaataatcacttaatcagtcaatttgaaaaactatttcattgaaagaa 13120876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 28189347 - 28189392
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaact 121  Q
    ||||| ||||||| ||||||| ||||||||||||| ||||||||||    
T  28189347 agactttagttctcctttttgtacataaatctgatcctatcaaact 28189392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 2e-21; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 35654094 - 35653990
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||||  |   |||||||||| |||||||| |||| | ||||||||||||||||||||||    
T  35654094 agactctagttctactttctggacataaatatgatgctatcaaacc-accatcaatttgtataatcacttaatcaatcaatttgaaaagctatttcattg 35653996  T
Q  176 aaagaa 181  Q
    ||||||    
T  35653995 aaagaa 35653990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 23426280 - 23426176
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||    ||| |||||||| |||||||| |||||| |||||| |||||||||||||||    
T  23426280 agactctagttctcctttttgtacataaatcggatcctatcaaaccacctct-aatttgtataatcacttaatcagtcaatttggaaagctatttcattg 23426182  T
Q  176 aaagaa 181  Q
    ||||||    
T  23426181 aaagaa 23426176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 21791707 - 21791557
Alignment:
Q  31 tatgttacttctttttctttcttcggtacacgtttgagnnnnnnn-agactctagttcttctttttggacataaatctgatgctatcaaacttattctca 129  Q
    ||||||||||||||||||||| || ||||| |||||||        ||||||||||||| |||| || |||||||| |||||| |||||||    | |||    
T  21791707 tatgttacttctttttctttcatcagtacatgtttgagttttttctagactctagttctcctttctgaacataaatttgatgccatcaaaccacct-tca 21791609  T
Q  130 atttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    || |||| |||||||| |||||| ||||||||||| ||||||||||||||||    
T  21791608 atgtgtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaa 21791557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 32130904 - 32130800
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||| |||||||||||||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||||| |||||||||| |||||||||||    
T  32130904 agacactagttcttctttttgtacataaatcggatcctatcaaaccacccct-aatttgtataatcacttaatcagtcaatttgaaaaactatttcattg 32130806  T
Q  176 aaagaa 181  Q
    ||||||    
T  32130805 aaagaa 32130800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 43154898 - 43154798
Alignment:
Q  80 tctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaag 179  Q
    ||||||||| |||||||||||||||| ||||||||||||||  |   |||||||||| |||||||| |||||| ||||| ||||| ||||||||| ||||    
T  43154898 tctagttctactttttggacataaatttgatgctatcaaac-caccatcaatttgtataatcacttaatcagtcaatttaaaaagttatttcattaaaag 43154800  T
Q  180 aa 181  Q
    ||    
T  43154799 aa 43154798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 182
Target Start/End: Original strand, 19661329 - 19661434
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||||||||||  |||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||||| |||||| |||||||||||||||    
T  19661329 agactctagttctcatttttgtacataaatcggatcctatcaaaccacccct-aatttgtataatcacttaatcagtcaatttggaaagctatttcattg 19661427  T
Q  176 aaagaaa 182  Q
    |||||||    
T  19661428 aaagaaa 19661434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 22423634 - 22423738
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||||  |   ||||||||||  ||||||| |||| | |||||||||| |||||| ||||    
T  22423634 agactctagttctactttctggacataaatttgatgctatcaaac-caccatcaatttgtatgatcacttaatcaatcaatttgaaaaactattttattg 22423732  T
Q  176 aaagaa 181  Q
    ||||||    
T  22423733 aaagaa 22423738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 27632352 - 27632452
Alignment:
Q  80 tctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaag 179  Q
    ||||||||| ||||||| |||||||| |||| |||||||||     || |||||||| |||||||| || ||| |||||||||||||| |||||||||||    
T  27632352 tctagttctcctttttgtacataaatttgatcctatcaaaccacccct-aatttgtataatcacttaattagtcaatttgaaaagctacttcattgaaag 27632450  T
Q  180 aa 181  Q
    ||    
T  27632451 aa 27632452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 45172707 - 45172655
Alignment:
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| |||||||| |||||| |||||||||||||||||||| |||||||    
T  45172707 aatttgtataatcacttaatcagtcaatttgaaaagctatttcatggaaagaa 45172655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 53011664 - 53011766
Alignment:
Q  78 actctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaa 177  Q
    |||||| |||| ||||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||||| |||||| |||||||||||||| ||    
T  53011664 actctaattctcctttttgtacataaatcagatcctatcaaaccacccct-aatttgtataatcacttaatcagtcaatttggaaagctatttcattaaa 53011762  T
Q  178 agaa 181  Q
    ||||    
T  53011763 agaa 53011766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 178
Target Start/End: Complemental strand, 28463702 - 28463601
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||| |||  ||||||||     || |||||||| |||||||| |||| | || |||||||||||||||||||    
T  28463702 agactctagttctcctttttgtacataaatcggatcttatcaaaccacccct-aatttgtataatcacttaatcaatcaagttgaaaagctatttcattg 28463604  T
Q  176 aaa 178  Q
    |||    
T  28463603 aaa 28463601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 5545279 - 5545383
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||||| ||||||| | ||||||||||| |||||| |||||||     | ||||||||| |||||||| ||| || |||||| ||||||||||||||     
T  5545279 agactctaattcttctgtctggacataaatttgatgccatcaaaccaccac-caatttgtataatcacttaatcggtcaatttggaaagctatttcatta 5545377  T
Q  176 aaagaa 181  Q
    ||||||    
T  5545378 aaagaa 5545383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 34982174 - 34982278
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||| ||||| |||| | |||||||||||||| | ||| |||||  || | ||||||||| |||||||| |||||| |||| ||||| ||||||| |||    
T  34982174 agactttagtttttctatctggacataaatctggtactaacaaac-catccccaatttgtataatcacttaatcagtcaattggaaaaactatttcgttg 34982272  T
Q  176 aaagaa 181  Q
    ||||||    
T  34982273 aaagaa 34982278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 26329190 - 26329154
Alignment:
Q  31 tatgttacttctttttctttcttcggtacacgtttga 67  Q
    ||||||||||||||||||||||| |||||||||||||    
T  26329190 tatgttacttctttttctttctttggtacacgtttga 26329154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 41038252 - 41038304
Alignment:
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| |||||||| |||||| |||||| ||| |||||||||||||||||    
T  41038252 aatttgtataatcacttaatcagtcaatttggaaaactatttcattgaaagaa 41038304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 44478041 - 44478093
Alignment:
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| |||||||  |||||| |||||| |||||||||||||||||||||    
T  44478041 aatttgtataatcactaaatcagtcaatttggaaagctatttcattgaaagaa 44478093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 29221735 - 29221635
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||||| ||||  |||||| ||||||||||||| |||||||||  | ||| |||||||| |||||||| | | || |||||| ||  |||||||||||    
T  29221735 agactctaattctcgtttttgtacataaatctgatcctatcaaac-cactcttaatttgtataatcacttaaacggtcaatttggaagtctatttcattg 29221637  T
Q  176 aa 177  Q
    ||    
T  29221636 aa 29221635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 55134209 - 55134262
Alignment:
Q  128 caatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||| ||| ||| |||| |||||| |||||||||||||||||||| |||||||    
T  55134209 caattggtataatgacttaatcagtcaatttgaaaagctatttcatagaaagaa 55134262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 2e-21; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 36060019 - 36059915
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| |||||| |||| |||| ||||||||||||||  |   |||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  36060019 agactctagttctactttttagacaaaaatttgatgctatcaaacc-accatcaatttgtataatcacttaatcagttaatttaaaaagctatttcattg 36059921  T
Q  176 aaagaa 181  Q
    ||||||    
T  36059920 aaagaa 36059915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 39081348 - 39081452
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||| | |||| ||||||||||| ||||||||||||||  |   |||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  39081348 agactctagttttactttctggacataaatttgatgctatcaaacc-accatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 39081446  T
Q  176 aaagaa 181  Q
    ||||||    
T  39081447 aaagaa 39081452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 19367533 - 19367429
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||||| ||||||||||||||||||||||    
T  19367533 agactctagttctcctttttgtacataaatcggattctatcaaaccacccct-aatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 19367435  T
Q  176 aaagaa 181  Q
    ||||||    
T  19367434 aaagaa 19367429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 1418860 - 1418963
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| |||||| ||||||| | ||||||||||||||  |   |||||||||| |||||||| |||||| |||||| |||||||||||||||    
T  1418860 agactctagttctactttttagacataatt-tgatgctatcaaacc-accatcaatttgtataatcacttaatcagtcaatttgtaaagctatttcattg 1418957  T
Q  176 aaagaa 181  Q
    ||||||    
T  1418958 aaagaa 1418963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 18676425 - 18676321
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||| ||| ||||||||||    || |||||||| ||| |||| |||||| |||||| |||||||||||||||    
T  18676425 agactctagttctcctttttgtacataaatcggatcctatcaaactacccct-aatttgtataataacttaatcagtcaatttggaaagctatttcattg 18676327  T
Q  176 aaagaa 181  Q
    ||||||    
T  18676326 aaagaa 18676321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 38599354 - 38599456
Alignment:
Q  78 actctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaa 177  Q
    |||| ||||||  ||| |||| |||||| ||||||||||||| | ||| |||||||||| |||||||| |||| | |||||||||| |||||||||||||    
T  38599354 actcaagttctattttatggatataaatttgatgctatcaaa-tcattatcaatttgtataatcacttaatcaatcaatttgaaaaactatttcattgaa 38599452  T
Q  178 agaa 181  Q
    ||||    
T  38599453 agaa 38599456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 6530609 - 6530713
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||||||||||  |||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||||| ||||||||||| ||||||||||    
T  6530609 agactctagttctcatttttgtacataaatcggatactatcaaaccacccct-aatttgtataatcacttaatcagtcaatttgaaaaggtatttcattg 6530707  T
Q  176 aaagaa 181  Q
    ||||||    
T  6530708 aaagaa 6530713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 15457470 - 15457554
Alignment:
Q  96 ggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||||||||||| | |||||||||| |  | ||||||||| |||||||| |||||| ||||||||||||||||| ||||||||||    
T  15457470 ggacataaatctggtactatcaaact-acccccaatttgtataatcacttaatcagtcaatttgaaaagctattttattgaaagaa 15457554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 18916168 - 18916064
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||| |||||||||  | |||||||||||||| | |||||||||  || | ||||||||| |||||||| |||| | ||||||||||||||||||| ||    
T  18916168 agactttagttcttcaatctggacataaatctggtactatcaaacc-atccccaatttgtataatcacttaatcaatcaatttgaaaagctatttcactg 18916070  T
Q  176 aaagaa 181  Q
    ||||||    
T  18916069 aaagaa 18916064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 26151857 - 26151757
Alignment:
Q  80 tctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaag 179  Q
    ||||||||| ||||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||||| |||||| |||||||||||||||||||    
T  26151857 tctagttctcctttttgtacataaatcggatcctatcaaaccacccct-aatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaag 26151759  T
Q  180 aa 181  Q
    ||    
T  26151758 aa 26151757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 41096652 - 41096548
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||| | |  |  |||||||| |||||||| |||||| |||||| ||| |||||||||||    
T  41096652 agactctagttctcctttttgtacataaatcagatcctatcaaa-tcacccctaatttgtataatcacttaatcagtcaatttggaaaactatttcattg 41096554  T
Q  176 aaagaa 181  Q
    ||||||    
T  41096553 aaagaa 41096548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 181
Target Start/End: Original strand, 2063721 - 2063859
Alignment:
Q  43 ttttctttcttcggtacacgtttgagnnnnnnn-agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatc 141  Q
    |||||||||||||||| |||||||||        ||||||||||| | ||||||| |||||||| | || |||||||||     || |||||||| ||||    
T  2063721 ttttctttcttcggtatacgtttgagttttttttagactctagttttcctttttgtacataaatataatcctatcaaaccacccct-aatttgtataatc 2063819  T
Q  142 actttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||| |||||| |||||| |||||||||||||||||||||    
T  2063820 acttaatcagtcaatttggaaagctatttcattgaaagaa 2063859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 7993582 - 7993686
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||| | ||| |||||||||     || |||||||| |||||||| |||||  |||||| |||||||||||||||    
T  7993582 agactctagttctcctttttgtacataaaccggatcctatcaaaccacccct-aatttgtataatcacttaatcagccaatttggaaagctatttcattg 7993680  T
Q  176 aaagaa 181  Q
    ||||||    
T  7993681 aaagaa 7993686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 13020373 - 13020477
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||||||||||  |||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||||| |||||| ||||||||||||||     
T  13020373 agactctagttctcttttttgtacataaatcggatcctatcaaaccacccct-aatttgtataatcacttaatcagtcaatttggaaagctatttcattt 13020471  T
Q  176 aaagaa 181  Q
    ||||||    
T  13020472 aaagaa 13020477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 25222273 - 25222377
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||| ||||||| ||||||| ||||||||| ||| |||||||| | ||||  |||||||| |||||||| || ||| |||||  |||| ||||||||||    
T  25222273 agactttagttctcctttttgtacataaatcggatcctatcaaa-tcattcctaatttgtataatcacttaattagtcaatttagaaagttatttcattg 25222371  T
Q  176 aaagaa 181  Q
    ||||||    
T  25222372 aaagaa 25222377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 4855995 - 4856047
Alignment:
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| |||||||| |||||| |||||| |||||||||||||||||||||    
T  4855995 aatttgtataatcacttaatcagtgaatttggaaagctatttcattgaaagaa 4856047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 27302642 - 27302538
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||||| ||||||| | |||||| ||||  ||||||| |||| | |  ||||||||||| |||||||| ||| || ||||||||||||||| |||||     
T  27302642 agactctaattcttctgtctggacaaaaattcgatgctaccaaa-tcaccctcaatttgtataatcacttaatcggtcaatttgaaaagctatatcatta 27302544  T
Q  176 aaagaa 181  Q
    ||||||    
T  27302543 aaagaa 27302538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 38985772 - 38985719
Alignment:
Q  128 caatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||||||| ||||| || |||| | ||||||||||||||||||||||||||||    
T  38985772 caatttgtataatcatttaatcaatcaatttgaaaagctatttcattgaaagaa 38985719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 18173002 - 18172950
Alignment:
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| |||||||| |||| | |||||||||||||||||||| |||||||    
T  18173002 aatttgtataatcacttaatcactcaatttgaaaagctatttcatcgaaagaa 18172950  T

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Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 32186264 - 32186220
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaac 120  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||||    
T  32186264 agactctagttctactttttagacataaatttgatgctatcaaac 32186220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 13997314 - 13997368
Alignment:
Q  127 tcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| | |||||||| || ||| |||||||||| |||||||||||||||||    
T  13997314 tcaatttgaataatcacttaatgagtcaatttgaaaaactatttcattgaaagaa 13997368  T

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Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 181
Target Start/End: Complemental strand, 17117689 - 17117655
Alignment:
Q  147 atcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||| ||||||||||||||||||||||||||||    
T  17117689 atcagtcaatttgaaaagctatttcattgaaagaa 17117655  T

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Target: scaffold0126 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 16660 - 16764
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||||| ||||||||||||||||||||||    
T  16660 agactctagttctcctttttgtacataaatcggatcctatcaaaccacccct-aatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 16758  T
Q  176 aaagaa 181  Q
    ||||||    
T  16759 aaagaa 16764  T

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Target: chr6 (Bit Score: 50; Significance: 4e-19; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 3748678 - 3748578
Alignment:
Q  80 tctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaag 179  Q
    ||||||||| |||||||||||||||| ||||||||||||||      |||||||||| |||||||| |||| | ||||||||||||||||||||||||||    
T  3748678 tctagttctactttttggacataaatttgatgctatcaaaccgcca-tcaatttgtataatcacttaatcaatcaatttgaaaagctatttcattgaaag 3748580  T
Q  180 aa 181  Q
    ||    
T  3748579 aa 3748578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 12614830 - 12614726
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||||| ||||||||||||||||||||||    
T  12614830 agactctagttctcctttttgtacataaatcggatcctatcaaaccacccct-aatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 12614732  T
Q  176 aaagaa 181  Q
    ||||||    
T  12614731 aaagaa 12614726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 30915480 - 30915376
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||||      |||||||||| ||| |||| |||||| ||||||||||||||||| ||||    
T  30915480 agactctagttctactttctggacataaatttgatgctatcaaaccccca-tcaatttgtataattacttaatcagtcaatttgaaaagctatttaattg 30915382  T
Q  176 aaagaa 181  Q
    ||||||    
T  30915381 aaagaa 30915376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 2618305 - 2618409
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    ||||| |||||||  |||||| ||||||||| ||| |||||||||     || |||||||| |||||||| |||||| ||||||||||||||||||||||    
T  2618305 agactttagttctcttttttgtacataaatcggatcctatcaaaccacccct-aatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 2618403  T
Q  176 aaagaa 181  Q
    ||||||    
T  2618404 aaagaa 2618409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 181
Target Start/End: Original strand, 57603 - 57742
Alignment:
Q  43 ttttctttcttcggtacacgtttgagnnnnnnn--agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaat 140  Q
    ||||||||||||||||||||||||||         | ||||||||||| ||||||| ||||||||||||| |||||||||  |  |  |||||||| |||    
T  57603 ttttctttcttcggtacacgtttgagtttttttttaaactctagttctcctttttgtacataaatctgatcctatcaaac-cacccataatttgtataat 57701  T
Q  141 cactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||| |||||| |||||  |||||||||||||| ||||||    
T  57702 cacttaatcagtcaatttagaaagctatttcattcaaagaa 57742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 628157 - 628105
Alignment:
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  628157 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaa 628105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 6754160 - 6754260
Alignment:
Q  80 tctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaag 179  Q
    |||||||||  |||||| ||||||||| ||| |||||||||  || |  |||||||| | |||||| |||||| |||||| |||||||||||||||||||    
T  6754160 tctagttctcttttttgtacataaatcggatcctatcaaacc-atccctaatttgtatagtcacttaatcagtcaatttggaaagctatttcattgaaag 6754258  T
Q  180 aa 181  Q
    ||    
T  6754259 aa 6754260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 31861002 - 31861055
Alignment:
Q  128 caatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||||||| ||| |||| |||||| ||||||||||||||||||||||||||||    
T  31861002 caatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaagaa 31861055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 21946109 - 21946161
Alignment:
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||| |||||||| ||||||  |||||||||||||||||||||||||||    
T  21946109 aatttgtataatcacttaatcagtctatttgaaaagctatttcattgaaagaa 21946161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 11088460 - 11088548
Alignment:
Q  31 tatgttacttctttttctttcttcggtacacgtttgag-nnnnnnnagactctagttcttctttttggacataaatctgatgctatcaaac 120  Q
    |||||||||||||||||||| |||||||||||||||||        |||||||| |||| |  |||||||||||||||||||||| |||||    
T  11088460 tatgttacttctttttcttttttcggtacacgtttgagttttttctagactctaattctcc--tttggacataaatctgatgctaccaaac 11088548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 14893507 - 14893427
Alignment:
Q  100 ataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||||||||||||||||||||  | ||| |||||||| ||| |||| |||||| |||||||||| ||||||| || ||||||    
T  14893507 ataaatctgatgctatcaaac-aactctgaatttgtataattacttaatcagtcaatttgaaaaactatttcgttaaaagaa 14893427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 6294229 - 6294273
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaac 120  Q
    ||||||||||||| |||||||| ||||||| ||||||||||||||    
T  6294229 agactctagttctactttttgggcataaatttgatgctatcaaac 6294273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 178
Target Start/End: Original strand, 19231569 - 19231663
Alignment:
Q  82 tagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaa 178  Q
    ||||||| |||| |||||||||||||| ||||||||||| ||   ||||||||||  ||||||| |||| | |||||||||||||||  ||||||||    
T  19231569 tagttctactttctggacataaatctggtgctatcaaac-taccttcaatttgta-tatcacttaatcaatcaatttgaaaagctatgacattgaaa 19231663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 29401142 - 29401194
Alignment:
Q  129 aatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    |||| ||| |||||||| |||||| ||||||||||| ||||||||||||||||    
T  29401142 aattagtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaa 29401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 181
Target Start/End: Complemental strand, 1690741 - 1690643
Alignment:
Q  82 tagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 181  Q
    ||||||| || |||||||||||||||| | |||||||||     | ||||||||| |||||||| |||| | ||||||||||  ||||||||||||||||    
T  1690741 tagttctcctatttggacataaatctggtactatcaaaccaccac-caatttgtataatcacttgatcaatcaatttgaaaatttatttcattgaaagaa 1690643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 17246 - 17142
Alignment:
Q  76 agactctagttcttctttttggacataaatctgatgctatcaaacttattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 175  Q
    |||||||||||||  |||||| | ||||||| ||| |||||||| | |  |  |||||||| |||||||| |||||| |||||| ||||||||||| |||    
T  17246 agactctagttctcatttttgtatataaatcggatcctatcaaa-tcacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcgttg 17148  T
Q  176 aaagaa 181  Q
    ||||||    
T  17147 aaagaa 17142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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