View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21248_low_15 (Length: 247)
Name: NF21248_low_15
Description: NF21248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21248_low_15 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 21 - 229
Target Start/End: Complemental strand, 37593700 - 37593492
Alignment:
| Q |
21 |
ttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagtg |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
37593700 |
ttacgatcaaataatcttcatggtgcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtg |
37593601 |
T |
|
| Q |
121 |
ggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataa |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37593600 |
ggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataa |
37593501 |
T |
|
| Q |
221 |
tgattctgt |
229 |
Q |
| |
|
||||||||| |
|
|
| T |
37593500 |
tgattctgt |
37593492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 21 - 230
Target Start/End: Complemental strand, 37532596 - 37532387
Alignment:
| Q |
21 |
ttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagtg |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
37532596 |
ttacgatcaaataatcttcatggtgcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctaacaacaattttagtg |
37532497 |
T |
|
| Q |
121 |
ggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataa |
220 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
37532496 |
ggcccttgccaatatcatgcatcaagaactttaaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgcgggttattactataa |
37532397 |
T |
|
| Q |
221 |
tgattctgtg |
230 |
Q |
| |
|
|||||||||| |
|
|
| T |
37532396 |
tgattctgtg |
37532387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 21 - 229
Target Start/End: Complemental strand, 37696091 - 37695883
Alignment:
| Q |
21 |
ttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagtg |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
37696091 |
ttacgatcaaataatcttcatggtgcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtg |
37695992 |
T |
|
| Q |
121 |
ggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataa |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
37695991 |
ggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgacggttattactataa |
37695892 |
T |
|
| Q |
221 |
tgattctgt |
229 |
Q |
| |
|
||||||||| |
|
|
| T |
37695891 |
tgattctgt |
37695883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 37823401 - 37823192
Alignment:
| Q |
20 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37823401 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
37823302 |
T |
|
| Q |
120 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactata |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||| ||||||||| | |
|
|
| T |
37823301 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgagtgacgaccaaattggtttgcaatacatgggtgactcttattactaca |
37823202 |
T |
|
| Q |
220 |
atgattctgt |
229 |
Q |
| |
|
|||||||||| |
|
|
| T |
37823201 |
atgattctgt |
37823192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 20 - 229
Target Start/End: Original strand, 37401661 - 37401870
Alignment:
| Q |
20 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37401661 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
37401760 |
T |
|
| Q |
120 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactata |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||| ||||| ||||||||| | |
|
|
| T |
37401761 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacaataacactggtttgcaatacatgggtgactcttattactaca |
37401860 |
T |
|
| Q |
220 |
atgattctgt |
229 |
Q |
| |
|
|||||||||| |
|
|
| T |
37401861 |
atgattctgt |
37401870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 37639243 - 37639034
Alignment:
| Q |
20 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37639243 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
37639144 |
T |
|
| Q |
120 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactata |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||| ||||| ||||||||| | |
|
|
| T |
37639143 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacaataacactggtttgcaatacatgggtgactcttattactaca |
37639044 |
T |
|
| Q |
220 |
atgattctgt |
229 |
Q |
| |
|
|||||||||| |
|
|
| T |
37639043 |
atgattctgt |
37639034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 37711001 - 37710823
Alignment:
| Q |
20 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37711001 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
37710902 |
T |
|
| Q |
120 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaataca |
198 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| | ||||||||| |
|
|
| T |
37710901 |
gggcccttgccagcatcatgcatcaagaactttcaaggaatgatgaaggtgaatgacaaaaaaattgatctgcaataca |
37710823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 37393540 - 37393723
Alignment:
| Q |
20 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
119 |
Q |
| |
|
||||||||||||| |||||||||| ||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
37393540 |
tttacgatcaaatcatcttcatgggtcaatcacatgttctagcaccaagcatccatttcctaagttgagaatttatgatgtctctagtaacaattttagt |
37393639 |
T |
|
| Q |
120 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggt |
203 |
Q |
| |
|
|| |||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
37393640 |
ggccccttgccaacatcatgcttcaagaactttcaaggaatgatggatgtgaataacagccaaattggtttgcaatacatgggt |
37393723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 37702180 - 37702023
Alignment:
| Q |
20 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
119 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
37702180 |
tttacgatcaaatcatcttcatggtgcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgcctctaacaacaattttagt |
37702081 |
T |
|
| Q |
120 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgaca |
177 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
37702080 |
ggccccttgccaacatcatgcatcaagaactttcaaggaatgattaatgtaaatgaca |
37702023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 37382989 - 37383199
Alignment:
| Q |
20 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
119 |
Q |
| |
|
|||| |||||||||| |||||||| |||||||| || ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
37382989 |
tttaagatcaaataaacttcatggcgcaatcacatgctctagcaccaaacatccatttcccaagttgagaatttttgatgtctctaacaacaattttatt |
37383088 |
T |
|
| Q |
120 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactata |
219 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | | |||||||||||||| |||| | ||||||||| |
|
|
| T |
37383089 |
gggcccttgccaacatcgtgcatcaagaattttcaaggaatgatgaatgtgaatgacaataacactggtttgcaatacatgggtaagtccaattactata |
37383188 |
T |
|
| Q |
220 |
atgattctgtg |
230 |
Q |
| |
|
||||||||||| |
|
|
| T |
37383189 |
atgattctgtg |
37383199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 37435207 - 37434997
Alignment:
| Q |
20 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
119 |
Q |
| |
|
|||| |||||||||| ||| ||||| ||||||||||||||| |||||| ||| | ||| | ||||| ||||||||||| ||| |||||||||||| |
|
|
| T |
37435207 |
tttaagatcaaataaacttaatggttcaatcacctgttctaacaccaaccatcctttttctaagttaagaatttttgacatcttcggtaacaattttagt |
37435108 |
T |
|
| Q |
120 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactata |
219 |
Q |
| |
|
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||| | ||||||||| |
|
|
| T |
37435107 |
ggatccttgccaacatcatgtatcaagaactttcaaggaatgatgaatgtgaatgatagccagattggtttgcaatacatgggtaagaacaattactata |
37435008 |
T |
|
| Q |
220 |
atgattctgtg |
230 |
Q |
| |
|
||||||||||| |
|
|
| T |
37435007 |
atgattctgtg |
37434997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 37428548 - 37428339
Alignment:
| Q |
20 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
119 |
Q |
| |
|
|||| |||||||||| || |||||| ||||||| ||||||| ||||| ||| |||| ||||||||||||||||| || ||| ||| || | ||||||| |
|
|
| T |
37428548 |
tttaagatcaaataaactgcatggtacaatcacttgttctatgaccaaacatccatt-cccaagttgagaattttcgacatctataataaaatttttagt |
37428450 |
T |
|
| Q |
120 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactata |
219 |
Q |
| |
|
|| |||||||| ||| ||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||| |||| |||| || ||||||||| |
|
|
| T |
37428449 |
ggtcccttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatgatagccaaattggtttgcagtacatgggtaaggccaattactata |
37428350 |
T |
|
| Q |
220 |
atgattctgtg |
230 |
Q |
| |
|
||||||||||| |
|
|
| T |
37428349 |
atgattctgtg |
37428339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 37413828 - 37413908
Alignment:
| Q |
20 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| |
|
|
| T |
37413828 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcacaaagcatacatttcccaagttgagaatattttatgt |
37413908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 161
Target Start/End: Complemental strand, 26437777 - 26437679
Alignment:
| Q |
63 |
accaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagtgggcccttgccaacatcatgcatcaagaactttcaaggaatg |
161 |
Q |
| |
|
||||| || |||||||| |||||||| ||||||||||||| ||||| ||||||||||| | ||||| ||| | | |||||| |||||| |||||||| |
|
|
| T |
26437777 |
accaaccaaacatttcctaagttgagggtttttgatgtctccaacaataattttagtggctctttgcccacaacgtacatcaaaaactttaaaggaatg |
26437679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 161
Target Start/End: Complemental strand, 26451146 - 26451048
Alignment:
| Q |
63 |
accaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagtgggcccttgccaacatcatgcatcaagaactttcaaggaatg |
161 |
Q |
| |
|
||||| || |||||||| |||||||| ||||||||||||| ||||| ||||||||||| | ||||| ||| | | |||||| |||||| |||||||| |
|
|
| T |
26451146 |
accaaccaaacatttcctaagttgagggtttttgatgtctccaacaataattttagtggctctttgcccacaacgtacatcaaaaactttaaaggaatg |
26451048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 14552869 - 14552686
Alignment:
| Q |
20 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
119 |
Q |
| |
|
||||||||||||| ||||||| || ||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14552869 |
tttacgatcaaatcatcttcacggagcaatcacctgttctagcatcaagcattcatttcctaagttgagaatttttgatgtctctaacaacaattttagt |
14552770 |
T |
|
| Q |
120 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggt |
203 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14552769 |
ggcaccttgccaacatcatgcatcaagaactttcaaggaatgatgaacgtgaatgacagccaaattggtttgcaatacatgggt |
14552686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 131; Significance: 4e-68; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 16843659 - 16843837
Alignment:
| Q |
20 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
119 |
Q |
| |
|
||||||||| |||||||||||||| | |||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16843659 |
tttacgatctaataatcttcatggagtaatcacttgttctagcaccaagcatccatttcctaagttgagaatttttgatgtctctaacaacaattttagt |
16843758 |
T |
|
| Q |
120 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaataca |
198 |
Q |
| |
|
|| |||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||| |||||||||||||||| |
|
|
| T |
16843759 |
ggcaccttgccaacatcatgcatccagaactttcaaggaatgatgaatgtggatgatagccagattggtttgcaataca |
16843837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 24218394 - 24218604
Alignment:
| Q |
20 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
119 |
Q |
| |
|
||||||||||||| |||||||||||| |||||| |||||||||||||| || ||||||| ||| ||||||||| ||||||||| || ||||| || |
|
|
| T |
24218394 |
tttacgatcaaatcatcttcatggtggaatcacttgttctagcaccaaacaatcatttccgaagatgagaatttacgatgtctctggtaataatttccgt |
24218493 |
T |
|
| Q |
120 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactata |
219 |
Q |
| |
|
|| ||| |||||||||| ||| ||||||| |||||||||||||| |||||||||| || || |||||||||||||| |||| || |||| |||| |
|
|
| T |
24218494 |
ggccccgtgccaacatcttgcctcaagaattttcaaggaatgattaatgtgaatgtcaataaatctggtttgcaatacatgggtaaggccaattattata |
24218593 |
T |
|
| Q |
220 |
atgattctgtg |
230 |
Q |
| |
|
||||||||||| |
|
|
| T |
24218594 |
atgattctgtg |
24218604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 230
Target Start/End: Original strand, 16846334 - 16846536
Alignment:
| Q |
27 |
tcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagtgggccct |
126 |
Q |
| |
|
|||||||| ||| ||||| ||||||| |||||||||||||||||| ||||||| || ||||||||||| || ||| | ||||| || ||||| || | |
|
|
| T |
16846334 |
tcaaataaactttatggttcaatcacatgttctagcaccaagcatccatttccaaa-ttgagaattttggacatcttcgataacaaattcagtggaccgt |
16846432 |
T |
|
| Q |
127 |
tgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataatgattc |
226 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||||||||| | |||||| | ||| ||||||||| |||| ||| || |||||||||||||||| |
|
|
| T |
16846433 |
tgccaacatcatgtatcaagaattttcaaggaatgatgaacgcgaatgataataaaactggtttgcagtacatgggaaaggtcaattactataatgattc |
16846532 |
T |
|
| Q |
227 |
tgtg |
230 |
Q |
| |
|
|||| |
|
|
| T |
16846533 |
tgtg |
16846536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University