View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21249_low_9 (Length: 239)

Name: NF21249_low_9
Description: NF21249
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21249_low_9
NF21249_low_9
[»] chr7 (19 HSPs)
chr7 (19-239)||(12737648-12737868)
chr7 (19-239)||(20104243-20104463)
chr7 (19-227)||(13372791-13372999)
chr7 (19-227)||(16765036-16765244)
chr7 (19-239)||(16528000-16528220)
chr7 (19-239)||(18597329-18597549)
chr7 (19-239)||(16469516-16469734)
chr7 (19-187)||(13653994-13654162)
chr7 (21-200)||(13669828-13670007)
chr7 (81-239)||(11958842-11959000)
chr7 (19-154)||(11966174-11966309)
chr7 (154-239)||(18276121-18276206)
chr7 (23-96)||(12387439-12387512)
chr7 (19-127)||(18276014-18276122)
chr7 (84-226)||(14547662-14547804)
chr7 (78-226)||(23512269-23512417)
chr7 (78-205)||(14224715-14224842)
chr7 (167-206)||(15935402-15935441)
chr7 (78-205)||(16328797-16328924)
[»] chr6 (14 HSPs)
chr6 (19-228)||(2652875-2653084)
chr6 (19-239)||(18007840-18008060)
chr6 (19-239)||(19561765-19561985)
chr6 (21-228)||(11215960-11216167)
chr6 (19-239)||(16160239-16160459)
chr6 (21-239)||(20020277-20020495)
chr6 (21-239)||(22771144-22771362)
chr6 (21-200)||(25776821-25777000)
chr6 (19-228)||(8728017-8728226)
chr6 (21-239)||(20166190-20166408)
chr6 (19-239)||(24859251-24859471)
chr6 (21-235)||(22597124-22597338)
chr6 (22-227)||(23521792-23521997)
chr6 (78-205)||(18846546-18846673)
[»] scaffold0042 (1 HSPs)
scaffold0042 (19-239)||(54581-54801)
[»] chr1 (10 HSPs)
chr1 (19-239)||(8647701-8647921)
chr1 (19-227)||(22467000-22467208)
chr1 (21-239)||(22843714-22843932)
chr1 (19-239)||(20233509-20233729)
chr1 (21-239)||(21802709-21802927)
chr1 (22-239)||(52951814-52952031)
chr1 (21-117)||(8951562-8951657)
chr1 (155-227)||(8951491-8951563)
chr1 (169-218)||(18853245-18853294)
chr1 (167-206)||(18485304-18485343)
[»] chr8 (13 HSPs)
chr8 (25-239)||(22827911-22828125)
chr8 (21-228)||(25469296-25469503)
chr8 (19-228)||(22359399-22359608)
chr8 (21-239)||(8326857-8327075)
chr8 (21-239)||(22287000-22287216)
chr8 (19-239)||(21823363-21823583)
chr8 (19-239)||(21952058-21952278)
chr8 (19-239)||(8310458-8310678)
chr8 (19-200)||(18401283-18401464)
chr8 (19-239)||(22037525-22037745)
chr8 (19-200)||(22095231-22095412)
chr8 (78-205)||(19291376-19291503)
chr8 (204-239)||(22095404-22095439)
[»] chr2 (16 HSPs)
chr2 (19-239)||(18992298-18992519)
chr2 (21-239)||(25137119-25137337)
chr2 (23-239)||(23015163-23015372)
chr2 (19-228)||(22290206-22290415)
chr2 (21-239)||(24799345-24799563)
chr2 (19-239)||(113497-113717)
chr2 (18-239)||(27619555-27619776)
chr2 (19-239)||(22048676-22048896)
chr2 (21-239)||(16771639-16771858)
chr2 (19-239)||(27623583-27623801)
chr2 (21-239)||(24173479-24173697)
chr2 (108-239)||(21893856-21893987)
chr2 (156-227)||(25147925-25147996)
chr2 (78-226)||(25354048-25354196)
chr2 (168-212)||(25591211-25591255)
chr2 (168-212)||(29953705-29953749)
[»] scaffold0020 (1 HSPs)
scaffold0020 (20-239)||(116946-117165)
[»] scaffold0506 (2 HSPs)
scaffold0506 (19-228)||(6094-6303)
scaffold0506 (60-228)||(10112-10274)
[»] scaffold0467 (1 HSPs)
scaffold0467 (19-239)||(9426-9646)
[»] chr4 (11 HSPs)
chr4 (19-239)||(15858100-15858320)
chr4 (19-239)||(5531-5751)
chr4 (21-239)||(15250324-15250542)
chr4 (21-239)||(1151-1369)
chr4 (19-239)||(15264099-15264319)
chr4 (19-239)||(22106951-22107171)
chr4 (19-239)||(15303981-15304201)
chr4 (123-227)||(16678467-16678571)
chr4 (22-211)||(11920347-11920536)
chr4 (78-205)||(10824220-10824347)
chr4 (167-206)||(14226227-14226266)
[»] scaffold0075 (1 HSPs)
scaffold0075 (19-239)||(45112-45332)
[»] scaffold0004 (1 HSPs)
scaffold0004 (19-239)||(367367-367587)
[»] chr5 (18 HSPs)
chr5 (19-239)||(22321462-22321682)
chr5 (19-239)||(21276159-21276379)
chr5 (23-239)||(20442209-20442425)
chr5 (19-239)||(21274612-21274832)
chr5 (21-239)||(20618153-20618371)
chr5 (19-239)||(24967206-24967426)
chr5 (19-239)||(30767136-30767356)
chr5 (19-227)||(25120213-25120421)
chr5 (19-227)||(25179304-25179512)
chr5 (74-239)||(21384319-21384485)
chr5 (78-205)||(21283750-21283877)
chr5 (78-205)||(24217014-24217141)
chr5 (84-226)||(20599330-20599472)
chr5 (84-226)||(20605627-20605769)
chr5 (84-226)||(20611946-20612088)
chr5 (84-226)||(20794235-20794377)
chr5 (78-226)||(18069467-18069615)
chr5 (167-206)||(20931585-20931624)
[»] chr3 (18 HSPs)
chr3 (19-239)||(14455010-14455230)
chr3 (21-227)||(14069575-14069781)
chr3 (19-239)||(12380648-12380868)
chr3 (21-239)||(11878349-11878567)
chr3 (19-239)||(13075464-13075684)
chr3 (19-239)||(13510369-13510589)
chr3 (21-239)||(10143051-10143269)
chr3 (21-239)||(15641066-15641284)
chr3 (19-228)||(13191412-13191621)
chr3 (19-239)||(10164187-10164407)
chr3 (19-239)||(13200685-13200905)
chr3 (19-239)||(12190834-12191054)
chr3 (19-239)||(12197478-12197698)
chr3 (19-239)||(11866970-11867190)
chr3 (19-239)||(13140185-13140405)
chr3 (58-227)||(17451938-17452107)
chr3 (19-200)||(15632958-15633139)
chr3 (84-226)||(10606026-10606168)
[»] scaffold0396 (1 HSPs)
scaffold0396 (19-227)||(6087-6296)
[»] scaffold0346 (2 HSPs)
scaffold0346 (19-239)||(332-552)
scaffold0346 (22-239)||(7470-7687)
[»] scaffold0078 (1 HSPs)
scaffold0078 (19-239)||(26490-26708)
[»] scaffold0326 (1 HSPs)
scaffold0326 (19-239)||(17314-17534)
[»] scaffold0117 (1 HSPs)
scaffold0117 (21-200)||(36874-37053)
[»] scaffold0051 (1 HSPs)
scaffold0051 (19-200)||(28424-28603)
[»] scaffold0065 (1 HSPs)
scaffold0065 (19-239)||(20567-20787)
[»] scaffold0367 (1 HSPs)
scaffold0367 (19-239)||(2750-2968)
[»] scaffold0112 (1 HSPs)
scaffold0112 (19-239)||(7288-7508)
[»] scaffold0023 (1 HSPs)
scaffold0023 (19-225)||(119367-119573)
[»] scaffold0164 (1 HSPs)
scaffold0164 (21-239)||(35465-35683)
[»] scaffold0759 (1 HSPs)
scaffold0759 (19-200)||(276-457)
[»] scaffold0750 (1 HSPs)
scaffold0750 (19-166)||(2240-2387)
[»] scaffold1058 (1 HSPs)
scaffold1058 (21-239)||(949-1167)
[»] scaffold0012 (1 HSPs)
scaffold0012 (19-152)||(188207-188340)
[»] scaffold0833 (1 HSPs)
scaffold0833 (120-239)||(1350-1468)
[»] scaffold0031 (1 HSPs)
scaffold0031 (19-97)||(25832-25910)
[»] scaffold0634 (1 HSPs)
scaffold0634 (21-88)||(801-868)
[»] scaffold0213 (1 HSPs)
scaffold0213 (22-205)||(23579-23762)
[»] scaffold0556 (1 HSPs)
scaffold0556 (180-239)||(280-339)
[»] scaffold0001 (1 HSPs)
scaffold0001 (22-202)||(524104-524284)
[»] scaffold0035 (1 HSPs)
scaffold0035 (78-205)||(53616-53743)
[»] scaffold0414 (1 HSPs)
scaffold0414 (78-226)||(14903-15051)
[»] scaffold0029 (1 HSPs)
scaffold0029 (78-226)||(119948-120096)
[»] scaffold0177 (1 HSPs)
scaffold0177 (167-206)||(34946-34985)
[»] scaffold0146 (1 HSPs)
scaffold0146 (78-205)||(38917-39044)
[»] scaffold1184 (1 HSPs)
scaffold1184 (168-226)||(1641-1699)
[»] scaffold0860 (1 HSPs)
scaffold0860 (162-208)||(4798-4844)


Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 12737648 - 12737868
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12737648 tggctcagaaatcaagtttggaaattttgtttgaaaattgcatgatgaatcaaaataaacaatttcaagagctcaaaaaccaaacgggatttctgaacga 12737747  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12737748 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 12737847  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||||||| |||||||||    
T  12737848 tctcaaacactgggagtcttt 12737868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 20104243 - 20104463
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20104243 tggctcagaaatcaagtttggaaaatttgttggaaaattgcatgatgaatcaaaataaacaacttcaagaactcaaaaaccaaacgggatttctgaacga 20104342  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  20104343 ctctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatcttccaagtggcccaacaagtgaccacctct 20104442  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||||||  |||||||||    
T  20104443 tctcaaacaccgggagtcttt 20104463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 19 - 227
Target Start/End: Complemental strand, 13372999 - 13372791
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13372999 tggctcagaaatcaagtttggaaattttgttagaaaattgcacgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 13372900  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13372899 ctctctctccaaactcactaccaaggttgattctatcgccacatacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 13372800  T
Q  219 tctcaaaca 227  Q
    |||||||||    
T  13372799 tctcaaaca 13372791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 19 - 227
Target Start/End: Complemental strand, 16765244 - 16765036
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||| ||||  |||||||||||||    
T  16765244 tggctcagaaatcaagtttggaaattttgttggaaaattgtatgatgaatcaaaataaacaacttcaagaactgaaaaactaaacttgatttctgaacga 16765145  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16765144 ctctctctccaaactcactaccaaggttgattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtagccacctct 16765045  T
Q  219 tctcaaaca 227  Q
    || ||||||    
T  16765044 tcccaaaca 16765036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 16528000 - 16528220
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||| |||||||||||| | ||||||||||||||||||||||| |||||||| || ||||| || ||||||||||| ||||||||||||||    
T  16528000 tggctcagaaatctagtttggaaattctattggaaaattgcatgatgaatcagaataaacagctccaagaactaaaaaaccaaacaggatttctgaacga 16528099  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| || |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16528100 ctctctctccaaactcactatcaaggttgattctatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccgcctct 16528199  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  16528200 tctcaaacaccaggagtcttt 16528220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 18597549 - 18597329
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| ||||| ||||||||||||||    |||||||||||| | ||||||||  | ||||||||||| ||||||||||||||    
T  18597549 tggctcagaaatcaagtttggagattttattggaaaattgcattgctaatcaaaataaaaatcttcaagaattgaaaaaccaaacaggatttctgaacga 18597450  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18597449 ctctctctccaaactcactaccaaggttgattctatcgccacacacaccaaaatgcttgagacccaaatctcccaagtagcccaacaagtggccacctct 18597350  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||| || ||||||||||    
T  18597349 tctcaaataccaggagtcttt 18597329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 16469734 - 16469516
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| ||||| |||||||| |||||    |||||||||||| | |||||||| || |||||||||| |||||||||||||||    
T  16469734 tggctcagaaatcaagtttggagattttattggaaaactgcatagctaatcaaaataaaaatcttcaagaactgaaaaaccaaatgggatttctgaacga 16469635  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
      ||||||||||||||| ||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16469634 --ctctctccaaactcactaccaaggttgattttatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 16469537  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  16469536 tctcaaacaccaggagtcttt 16469516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 13653994 - 13654162
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  13653994 tggctcagaaatcaagtttggaaattttgttggaaaattgtatgatgaatcaaaataaacaacttcaagaactgaaaaaccaaacaggatttctgaacga 13654093  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaat 187  Q
     |||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  13654094 ctctctctccaaactcactaccaaggttgattctatcgccacacacactaaaaggcttgagacccaaat 13654162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 21 - 200
Target Start/End: Original strand, 13669828 - 13670007
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| |||| ||||||||| |    
T  13669828 gctcagaaatctagtttggaaatattgttggaaaattgcatgatgaatcaaaataaacaacttcaggagttaaaaaaccaaacaggatctctgaacgact 13669927  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcc 200  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  13669928 ctctctccaagctcaataccaaggttgattccatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcc 13670007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 11959000 - 11958842
Alignment:
Q  81 cttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgaga 180  Q
    |||||||| || ||||||||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||    
T  11959000 cttcaagaactgaaaaaccaaacaggatttctgaacgactctctctccaaactcactaccaaggttgattctatcgccacacacaccaaaatgcttgaga 11958901  T
Q  181 cccaaatctcccaagtggcccaacaagtggccacctcttctcaaacactaggagtcttt 239  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||    
T  11958900 cccaaatctcccaagtggcccaacaagtggacacctcttctcaaacaccgggagtcttt 11958842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 11966309 - 11966174
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  11966309 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgataaatcaaaataaacaacttcaagaactgaaaaaccaaacaggatttctgaacga 11966210  T
Q  119 atctctctccaaactcaataccaaggtagattctat 154  Q
     |||||||||||||||| ||||||||| ||||||||    
T  11966209 ctctctctccaaactcactaccaaggttgattctat 11966174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 18276121 - 18276206
Alignment:
Q  154 tcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttctcaaacactaggagtcttt 239  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18276121 tcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttctcaaacaccaggagtcttt 18276206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 12387512 - 12387439
Alignment:
Q  23 tcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaa 96  Q
    |||||||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  12387512 tcagaaatcaagtttgaaaattttgttagaaatttgtatgatgaatcaaaataaacaacttcaagagctcaaaa 12387439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 18276014 - 18276122
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| ||||| || |||||||| ||    |||||||||||| | ||||||||  | ||||||||||| ||||||||||||||    
T  18276014 tggctcagaaatcaagtttggagattttattagaaaattgtattgctaatcaaaataaaaatcttcaagaattgaaaaaccaaacaggatttctgaacga 18276113  T
Q  119 atctctctc 127  Q
     ||||||||    
T  18276114 ctctctctc 18276122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 226
Target Start/End: Original strand, 14547662 - 14547804
Alignment:
Q  84 caagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagaccc 183  Q
    |||||||| |||||||||||||||||| |||| || |||||  ||||| |||   |||||||||| || || || || |||| ||| || ||| | ||||    
T  14547662 caagagcttaaaaaccaaacgggatttttgaatgattctcttgccaaaatcacatccaaggtagactccatagcaactcacaataagatacttaaaaccc 14547761  T
Q  184 aaatctcccaagtggcccaacaagtggccacctcttctcaaac 226  Q
    ||||||| |||||||||||||| ||| | || || ||||||||    
T  14547762 aaatctctcaagtggcccaacacgtgtctacttcctctcaaac 14547804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 226
Target Start/End: Original strand, 23512269 - 23512417
Alignment:
Q  78 caacttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttg 177  Q
    ||||| |||||||| ||||||||||| | |||| |||| || |||||  ||||| |||   |||||||||| || || || || |||| | | || ||||    
T  23512269 caactccaagagcttaaaaaccaaactgaatttttgaatgactctcttgccaaaatcacatccaaggtagactccatagcaactcacaatgagatacttg 23512368  T
Q  178 agacccaaatctcccaagtggcccaacaagtggccacctcttctcaaac 226  Q
    | ||||||||||| |||||||||||||| ||| | || || ||||||||    
T  23512369 aaacccaaatctctcaagtggcccaacacgtgactacttcctctcaaac 23512417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 14224842 - 14224715
Alignment:
Q  78 caacttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttg 177  Q
    ||||| |||||||| ||||||||||| | |||| |||| || |||||  ||||| |||   |||||||||| || || || || |||  ||| || ||||    
T  14224842 caactccaagagcttaaaaaccaaactgaatttttgaatgactctcttgccaaaatcacatccaaggtagactccatagcaactcacgataagatacttg 14224743  T
Q  178 agacccaaatctcccaagtggcccaaca 205  Q
    | ||||||||||| ||||||||||||||    
T  14224742 aaacccaaatctctcaagtggcccaaca 14224715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 15935402 - 15935441
Alignment:
Q  167 taaaatgcttgagacccaaatctcccaagtggcccaacaa 206  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  15935402 taaaatgcttgagacgcaaatatcccaagtggcccaacaa 15935441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 16328924 - 16328797
Alignment:
Q  78 caacttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttg 177  Q
    ||||| || ||||| ||||| ||||| |||||| |||| || |||||  ||||| |||   |||||||||| || || |  || |||| ||| |||||||    
T  16328924 caactccacgagcttaaaaatcaaactggatttttgaatgactctcttgccaaaatcacatccaaggtagactccatagaaactcacaataagatgcttg 16328825  T
Q  178 agacccaaatctcccaagtggcccaaca 205  Q
    | ||||||||||| ||||||||||||||    
T  16328824 aaacccaaatctctcaagtggcccaaca 16328797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 19 - 228
Target Start/End: Original strand, 2652875 - 2653084
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  2652875 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagaactcaaaaaccaaatgggatttctgaacga 2652974  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2652975 ctctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 2653074  T
Q  219 tctcaaacac 228  Q
    ||||||||||    
T  2653075 tctcaaacac 2653084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 18007840 - 18008060
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  18007840 tggctcagaaatcaagtttggaaattttgttagaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaatgggatttttgaacga 18007939  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18007940 ctctctctccaaactcaataccaaggtagattctatagccacacacaccaaaatgcttgagacccaaatctcccaagtagcccaacaagtggccacctct 18008039  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||||||  |||||||||    
T  18008040 tctcaaacaccgggagtcttt 18008060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 19561985 - 19561765
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||  |||| |||||| |||||||||||||    
T  19561985 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataactaacttcaagaactataaaatcaaacgagatttctgaacga 19561886  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  19561885 ctctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatacttgagacccaaatctcccaagtggcacaacaagtggccacctct 19561786  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||||||  |||||||||    
T  19561785 tctcaaacaccgggagtcttt 19561765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 21 - 228
Target Start/End: Original strand, 11215960 - 11216167
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| || |||||||||||  ||||||||||||| |    
T  11215960 gctcagaaatcaagtttggaaattttgttggtaaattgtatgatgaatcaaaataaacaacttcaagaactgaaaaaccaaacatgatttctgaacgact 11216059  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  11216060 ctctctccaaactcactaccaaggttgattctatcgccacacacactaaaatgcttgagaccaaaatctcccaagtggcccaaaaagtggccacctcttc 11216159  T
Q  221 tcaaacac 228  Q
    ||||||||    
T  11216160 tcaaacac 11216167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 16160459 - 16160239
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| | |||||||| || ||||||||||| ||||||||||||||    
T  16160459 tggctcagaaatcaagtttggagattttgttggaaaattgcatagctaatcaaaataaaaatcttcaagaactgaaaaaccaaacaggatttctgaacga 16160360  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16160359 ctctctctccaaactcactaccaaggtcgattctatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccgcctct 16160260  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  16160259 tctcaaacaccaggagtcttt 16160239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 20020495 - 20020277
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| |||| ||||||||| |    
T  20020495 gctcagaaatctagtttggaaatactgttggaaaattgcatgatgaatcaaaataaacaacttcaggagttaaaaaaccaaacaggatctctgaacgact 20020396  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    |||||||||| |||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20020395 ctctctccaagctcaataccaaggttgattccatcgccacgcacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccatctcttc 20020296  T
Q  221 tcaaacactaggagtcttt 239  Q
    | |||||| ||||||||||    
T  20020295 ttaaacaccaggagtcttt 20020277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 22771362 - 22771144
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||| |    
T  22771362 gctcagaaatctagtttggaaataatgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctaaaaaaccaaacaggatctctgaacgact 22771263  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||| | |||||||||||||||||||||||    
T  22771262 ctctctccaagctcaataccaaggttgattccatcgccacacacaccaaaatccttgaaacccaaatctcccaactagcccaacaagtggccacctcttc 22771163  T
Q  221 tcaaacactaggagtcttt 239  Q
     ||||||| ||||||||||    
T  22771162 acaaacaccaggagtcttt 22771144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 200
Target Start/End: Original strand, 25776821 - 25777000
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||| || |||||| || |    
T  25776821 gctcagaaatcaagtttggaaattttgttggaaaattgtatgatgagccaaaataaacaacttcaagagctcaaaaaccaaacggaatatctgaatgatt 25776920  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25776921 ctctctccaaactcaataccaaggtcgattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcc 25777000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 8728226 - 8728017
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||||||||||||||||||||||||    |||||||||||| | |||||||| || ||||||||||| ||||||||||||||    
T  8728226 tggctcagaaatcaagtttggaaattttgttggaaaattgcatagctaatcaaaataaaaatcttcaagaactgaaaaaccaaactggatttctgaacga 8728127  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| |||| |||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8728126 ctctctctccaaactcattaccaaggttgattttatctccacacacaccaaaatgcttgatacccaaatctcccaagtggcccaacaagtggccacctct 8728027  T
Q  219 tctcaaacac 228  Q
    ||||||||||    
T  8728026 tctcaaacac 8728017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 20166190 - 20166408
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||| |||||||||||  |||| ||||||||||||||||||||||||||||| ||||||||| | ||||||||||| |||| ||||||||| |    
T  20166190 gctcagaaatctagtttggaaatcatgttagaaaattgcatgatgaatcaaaataaacagcttcaagagttaaaaaaccaaacaggatctctgaacgact 20166289  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    ||||||||||  ||||||||||||| ||||| |||||||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  20166290 ctctctccaaggtcaataccaaggttgattccatcgccacacacaccaaaatgcttgaaacacaaatctcccaagtagcccaacaagtggccacctcttc 20166389  T
Q  221 tcaaacactaggagtcttt 239  Q
    |||||||| ||||||||||    
T  20166390 tcaaacaccaggagtcttt 20166408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 24859471 - 24859251
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| |||||  |||||||||||||    |||||||||||| | ||||||||  | ||||||||||| ||||||||||||||    
T  24859471 tggctcagaaatcaagtttggagattttactggaaaattgcattgcaaatcaaaataaaaatcttcaagaattgaaaaaccaaacaggatttctgaacga 24859372  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||||||||||||||| || ||||| |||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  24859371 ctctctctccaaactcaataccaaagttgattccatcgccacgcacaccaaaatgcttgagacccaaatctcccaaatggcccaataagtggccacctct 24859272  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  24859271 tctcaaacaccaggagtcttt 24859251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 21 - 235
Target Start/End: Complemental strand, 22597338 - 22597124
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    |||||||||||||||| |||||||||  ||||||| |   | ||||| |||  |||||| |||||||||||||||||| |||  ||||||||||| || |    
T  22597338 gctcagaaatcaagttcggaaattttaatggaaaactatgtcatgaaccaatctaaacagcttcaagagctcaaaaacgaaatcggatttctgaatgatt 22597239  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    |||| ||||||||||  ||||||||||| ||||| || || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||    
T  22597238 ctctttccaaactcaccaccaaggtagaatctattgctacccacactaaagtgtttgagacccaaatctcccaagtggcccaacaagtggccaccttttc 22597139  T
Q  221 tcaaacactaggagt 235  Q
    ||||||||| |||||    
T  22597138 tcaaacactgggagt 22597124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 23521997 - 23521792
Alignment:
Q  22 ctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaatc 121  Q
    |||||||||| ||||||||||||||  ||||||| |   | |||||||||  |||||| || |||||||| |||||||||||  |||||||||| || ||    
T  23521997 ctcagaaatctagtttggaaattttaatggaaaactatgtcatgaatcaatctaaacagctccaagagcttaaaaaccaaaccagatttctgaatgattc 23521898  T
Q  122 tctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttct 221  Q
    ||| |||||||||||| | || ||| | ||||| || || || |||||||||||||| || ||| ||||||||||||| ||| | ||||| || ||||||    
T  23521897 tctttccaaactcaattctaaagtatactctattgctactcatactaaaatgcttgaaactcaagtctcccaagtggctcaagaggtggctacttcttct 23521798  T
Q  222 caaaca 227  Q
    ||||||    
T  23521797 caaaca 23521792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 18846546 - 18846673
Alignment:
Q  78 caacttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttg 177  Q
    ||||| |||||||| |||||||||||  ||||| |||| || |||||  ||||| |||   |||||||||| || || ||  | |||| ||| || ||||    
T  18846546 caactccaagagcttaaaaaccaaactagatttttgaatgactctcttgccaaaatcacatccaaggtagactccatagcacctcacaataagatacttg 18846645  T
Q  178 agacccaaatctcccaagtggcccaaca 205  Q
    | ||||||||||| ||||||||||||||    
T  18846646 aaacccaaatctctcaagtggcccaaca 18846673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 54801 - 54581
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  54801 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttaaagaactcaaaaatcaaacgggatttctgaacga 54702  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54701 ctctctctccaaactcaataccaaggtagattttatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 54602  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||||||  |||||||||    
T  54601 tctcaaacaccgggagtcttt 54581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 8647701 - 8647921
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  8647701 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgagatttatgaacga 8647800  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8647801 ctctctctacaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtgccccaacaagtggccacctct 8647900  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||||||  |||||||||    
T  8647901 tctcaaacaccgggagtcttt 8647921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 19 - 227
Target Start/End: Complemental strand, 22467208 - 22467000
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||| |||||||    
T  22467208 tggctcagaaatcaagtttgtaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagaactgaaaaaccaaacaggatttttgaacga 22467109  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22467108 ctctctctccaaactcactaccaaggttgattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 22467009  T
Q  219 tctcaaaca 227  Q
    |||||||||    
T  22467008 tctcaaaca 22467000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 22843714 - 22843932
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| |||| ||||||||| |    
T  22843714 gctcagaaatctagtttggaaatactgttggaaaattgcatgatgaatcaaaataaacaacttcaggagttaaaaaaccaaacaggatctctgaacgact 22843813  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22843814 ctctctccaagctcaataccaaggttgattccatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccatctcttc 22843913  T
Q  221 tcaaacactaggagtcttt 239  Q
    |||||||| ||||||||||    
T  22843914 tcaaacaccaggagtcttt 22843932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 20233509 - 20233729
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||| ||| |||||||| |||||||||| ||||||||||| ||||||||| |  |||||||  | ||||||||||| ||||||||||||||    
T  20233509 tggctcagaaatctagtctggaaattctgttggaaaaatgcatgatgaaccaaaataaaaatattcaagaattgaaaaaccaaacaggatttctgaacga 20233608  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20233609 ctctctctccaaactcaataccaaggttgattctatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 20233708  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  20233709 tctcaaacaccaggagtcttt 20233729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 21802927 - 21802709
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| |||| ||||||| | |    
T  21802927 gctcagaaatctagtttggaaatactgttggaaaattgcatgatgaatcaaaataaacaacttcaggagttaaaaaaccaaacaggatctctgaacaact 21802828  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21802827 ctctctccaagctcaataccaaggttgattccatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccatctcttc 21802728  T
Q  221 tcaaacactaggagtcttt 239  Q
    |||||||| ||||||||||    
T  21802727 tcaaacaccaggagtcttt 21802709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 52952031 - 52951814
Alignment:
Q  22 ctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaatc 121  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  | ||||||||||| |||||| ||||||| ||    
T  52952031 ctcagaaaacaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaactccaagaaatgaaaaaccaaacaggatttatgaacgactc 52951932  T
Q  122 tctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttct 221  Q
    |||||||||||||| ||||||||| |||||||||||||||||||| ||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  52951931 tctctccaaactcactaccaaggttgattctatcgccacacacaccaaaatgctaaaaacccaaatctcccaagtggcccaacaagtggccacctcttct 52951832  T
Q  222 caaacactaggagtcttt 239  Q
    |||||||  |||||||||    
T  52951831 caaacaccgggagtcttt 52951814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 8951657 - 8951562
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||    
T  8951657 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaa-ttcaagaactaaaaaaccaaacgggatttctgaacg 8951562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 8951563 - 8951491
Alignment:
Q  155 cgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttctcaaaca 227  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8951563 cgccgcacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttctcaaaca 8951491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 18853294 - 18853245
Alignment:
Q  169 aaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18853294 aaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 18853245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 18485343 - 18485304
Alignment:
Q  167 taaaatgcttgagacccaaatctcccaagtggcccaacaa 206  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  18485343 taaaatgcttgagacgcaaatatcccaagtggcccaacaa 18485304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 25 - 239
Target Start/End: Original strand, 22827911 - 22828125
Alignment:
Q  25 agaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaatctct 124  Q
    ||||||||||||| ||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22827911 agaaatcaagtttcgaaattttgttggaaaactgcatgatgagccaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgattctct 22828010  T
Q  125 ctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttctcaa 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22828011 ctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttctcaa 22828110  T
Q  225 acactaggagtcttt 239  Q
    |||| ||||||||||    
T  22828111 acaccaggagtcttt 22828125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 21 - 228
Target Start/End: Original strand, 25469296 - 25469503
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| |    
T  25469296 gctcagaaatcaagtttggaaattttgttagaaaattgcatgatgaatcaaaataaacaacttcaggaactcaaaaaccaaacgggatttctaaacgatt 25469395  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25469396 ctctctccaaactcaataccaaggtagattctattgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 25469495  T
Q  221 tcaaacac 228  Q
    ||||||||    
T  25469496 tcaaacac 25469503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 19 - 228
Target Start/End: Original strand, 22359399 - 22359608
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||||||||||||||||||||| || ||||||||| |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  22359399 tggctcagaaatcaagtttggaaattttgttagagaattgcatgctgaatcaaaacaaacagcttcaagagctcaaaaaccaaacaggatttctgaacga 22359498  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22359499 ctctctctccaaactcaataccaaggtagactctatagccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtagccacctct 22359598  T
Q  219 tctcaaacac 228  Q
    ||||||||||    
T  22359599 tctcaaacac 22359608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 8327075 - 8326857
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||| ||||||||| |    
T  8327075 gctcagaaatctagtttggaaataatgttggaaaattgcatgatgaatcaaaataaacaacttcaagagttaaaaaaccaaacaggatctctgaacgact 8326976  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8326975 ctctctccaagctcaataccaaggttgattccatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccagcaagtggccacctcttc 8326876  T
Q  221 tcaaacactaggagtcttt 239  Q
    ||||||||  |||||||||    
T  8326875 tcaaacaccgggagtcttt 8326857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 22287000 - 22287216
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    |||||||||||||||||| |||||||||||||||| || |||||||  ||||||||||||||||||||||||||||||||||| ||||| || ||||| |    
T  22287000 gctcagaaatcaagtttgaaaattttgttggaaaactgtatgatgagccaaaataaacaacttcaagagctcaaaaaccaaactggattcctaaacgatt 22287099  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    ||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22287100 ctctctcgaaactcaataccaaggtagattctatcgc--cacacactaaaatgcttgagactcaaatctcccaagtggcccaacaagtggccacctcttc 22287197  T
Q  221 tcaaacactaggagtcttt 239  Q
    ||||||||  |||||||||    
T  22287198 tcaaacaccgggagtcttt 22287216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 21823363 - 21823583
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    |||||||||||| | |||||||| || ||||||||||||||||||||||||||    
T  21823363 tggctcagaaatcaagtttggagattttgttgcaaaattgcatagctaatcaaaataaaaatcttcaagaactgaaaaaccaaacgggatttctgaacga 21823462  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||| |||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21823463 ctctctctccaagctcactaccaaggttgattctatcgccacacacaccaaaatgcttgagacccaaatctcccaagtagcccaacaagtggccacctct 21823562  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  21823563 tctcaaacaccaggagtcttt 21823583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 21952058 - 21952278
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| ||||| |||||||| |||||    |||||||||||| | |||||||| || ||||||||||||||||||||||||||    
T  21952058 tggctcagaaatcaagtttggagattttattggaaaactgcatagctaatcaaaataaaaatcttcaagaactgaaaaaccaaacgggatttctgaacga 21952157  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21952158 ctctctctccaaactcactaccaaggttgattctatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 21952257  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||| |  ||||||||||    
T  21952258 tctcaaaaaacaggagtcttt 21952278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 8310458 - 8310678
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| |||||  |||||||||||||    |||||||||||| | ||||||||  | ||||||||||| ||||||||||||||    
T  8310458 tggctcagaaatcaagtttggagattttactggaaaattgcattgcaaatcaaaataaaaatcttcaagaattgaaaaaccaaacaggatttctgaacga 8310557  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8310558 ctctctctccaaactcaataccaaggttgattccatcgccacgcacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 8310657  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  8310658 tctcaaacaccaggagtcttt 8310678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 18401283 - 18401464
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||| |||||| |||||||    
T  18401283 tggctcagaaatcatgtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttaaagaactgaaaaaccaaacaggatttatgaacga 18401382  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcc 200  Q
     ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  18401383 ctctctctccaaactcaataccaaagtagattctatcgccacacacaccaaaatgcttgaaacccaaatctcccaagtggcc 18401464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 22037745 - 22037525
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||| |||||||||||||||| ||| ||||||||||||||||    |||||||||||| | |||||||| || ||||||||||| |||||||||||||     
T  22037745 tggctaagaaatcaagtttggagattctgttggaaaattgcatagctaatcaaaataaaaatcttcaagaactgaaaaaccaaacaggatttctgaacgg 22037646  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||| ||||||    
T  22037645 ctctctctccaaactcactaccaaggttgattccatcgccacacacaccaaaatgcttaagacccaaatctcccaagtagcccaacaagtggcaacctct 22037546  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  22037545 tctcaaacaccaggagtcttt 22037525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 22095231 - 22095412
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| ||||| ||||||||||||||    |||||||||||| | ||||||||  | ||||||||||| ||||||||||||||    
T  22095231 tggctcagaaatcaagtttggagattttattggaaaattgcattgctaatcaaaataaaaatcttcaagaattgaaaaaccaaacaggatttctgaacga 22095330  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcc 200  Q
     |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  22095331 ctctctctccaaactcaataccaaggttgattctatcgccacacacacaaaaatgcttgagacccaaatcacccaagtggcc 22095412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 19291503 - 19291376
Alignment:
Q  78 caacttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttg 177  Q
    ||||| |||||||| ||||||||||| |||||| |||| || |||||  ||||| |||   |||||||||| ||||| |  || |||| ||| || ||||    
T  19291503 caactccaagagcttaaaaaccaaactggatttttgaatgactctcttgccaaaatcacatccaaggtagactctatagaaactcacaataagatacttg 19291404  T
Q  178 agacccaaatctcccaagtggcccaaca 205  Q
    | ||||||||||| ||||||||||||||    
T  19291403 aaacccaaatctctcaagtggcccaaca 19291376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 239
Target Start/End: Original strand, 22095404 - 22095439
Alignment:
Q  204 caagtggccacctcttctcaaacactaggagtcttt 239  Q
    ||||||||||||||||||||||||| ||||||||||    
T  22095404 caagtggccacctcttctcaaacaccaggagtcttt 22095439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 18992519 - 18992298
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||    
T  18992519 tggctcagaaatcaagtttggaaattttgttgaaaaattgcatgatgaatcaaaataaacaacttcgagaactcaaaaaccaaacgggatttttgaacga 18992420  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctccc-aagtggcccaacaagtggccacctc 217  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18992419 gtctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaaagtggcccaacaagtggccacctc 18992320  T
Q  218 ttctcaaacactaggagtcttt 239  Q
    ||||||||||| ||||||||||    
T  18992319 ttctcaaacaccaggagtcttt 18992298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 25137337 - 25137119
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25137337 gctcagaaatcaagtttggaaattttgttggaaaactgcatgatgagccaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgatt 25137238  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25137237 ctctctccaaactcaatgccaaggtagattctatcgctacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 25137138  T
Q  221 tcaaacactaggagtcttt 239  Q
    ||||||||  |||||||||    
T  25137137 tcaaacaccgggagtcttt 25137119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 23 - 239
Target Start/End: Original strand, 23015163 - 23015372
Alignment:
Q  23 tcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaatct 122  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||    
T  23015163 tcagaaaacaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagaactcaaaaaccaaaagggatttctgaacgactct 23015262  T
Q  123 ctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttctc 222  Q
    ||||||||||||||||||| ||       | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23015263 ctctccaaactcaataccatgg-------tgtcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttctc 23015355  T
Q  223 aaacactaggagtcttt 239  Q
    ||||||| |||||||||    
T  23015356 aaacactgggagtcttt 23015372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 19 - 228
Target Start/End: Original strand, 22290206 - 22290415
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  22290206 tggctcagaaatctagtttggaaattctgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctaaaaaaccaaacaggatttctgaacga 22290305  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||| |||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  22290306 ctctctctccaagctcaatactaaggtcgattctatcgccactcacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggctgcctct 22290405  T
Q  219 tctcaaacac 228  Q
    ||||||||||    
T  22290406 tctcaaacac 22290415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 24799563 - 24799345
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| |||| ||||||||| |    
T  24799563 gctcagaaatctagtttggaaatactgttggaaaattgcatgatgaatcaaaataaacaacttcaggagttaaaaaaccaaacaggatctctgaacgact 24799464  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24799463 ctctctccaagctcaataccaaggttgattccatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccatctcttc 24799364  T
Q  221 tcaaacactaggagtcttt 239  Q
    |||||||| ||||||||||    
T  24799363 tcaaacaccaggagtcttt 24799345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 113497 - 113717
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| ||||| ||||||||||||||    |||||||||||| | ||||||||  | ||||||||||| ||||||||||||||    
T  113497 tggctcagaaatcaagtttggagattttattggaaaattgcattgctaatcaaaataaaaatcttcaagaattgaaaaaccaaacaggatttctgaacga 113596  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||| ||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  113597 ctctctccccaaactcactaccaaggttgattctatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 113696  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||||||||||||||    
T  113697 tctcaaacactaggagtcttt 113717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 27619555 - 27619776
Alignment:
Q  18 atggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacg 117  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||    ||||||||| || | ||||||||  | ||||||||||| |||||||||||||    
T  27619555 atggctcagaaatcaagtttggagattttattggaaaattgcattgctaatcaaaattaaaatcttcaagaattgaaaaaccaaacaggatttctgaacg 27619654  T
Q  118 aatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctc 217  Q
    | |||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27619655 actctctctccaaactcactaccaaggttgattctatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctc 27619754  T
Q  218 ttctcaaacactaggagtcttt 239  Q
    ||||||||||| |||| |||||    
T  27619755 ttctcaaacaccaggaatcttt 27619776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 22048896 - 22048676
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| |||||  |||||||||||||    |||||||||||| | ||||||||  | ||||||||||| ||||||||||||||    
T  22048896 tggctcagaaatcaagtttggagattttactggaaaattgcattgcaaatcaaaataaaaatcttcaagaattgaaaaaccaaacaggatttctgaacga 22048797  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22048796 ctctctctccaaactcaataccaaggttgattccatcgccacgcacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 22048697  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  22048696 tctcaaacaccaggagtcttt 22048676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 16771639 - 16771858
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||||| ||||||||||| ||| | ||||||||||| |||| ||| ||||| |    
T  16771639 gctcagaaatctagtttggaaatactgttggaaaattgcatgatgaatcaaaacaaacaacttcaggagttaaaaaaccaaacaggatctctaaacgact 16771738  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatct-cccaagtggcccaacaagtggccacctctt 219  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  16771739 ctctctccaagctcaataccaaggttgattccatcgccacacacaccaaaatgcttgaaacccaaatctccccaagtggcccaacaagtggccatctctt 16771838  T
Q  220 ctcaaacactaggagtcttt 239  Q
    ||||||||| ||||||||||    
T  16771839 ctcaaacaccaggagtcttt 16771858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 27623583 - 27623801
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| |||||  |||||||||||||    |||||||||||| | ||||||||  | ||||||||||| ||||||||||||||    
T  27623583 tggctcagaaatcaagtttggagattttactggaaaattgcattgcaaatcaaaataaaaatcttcaagaattgaaaaaccaaacaggatttctgaacga 27623682  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
      |||||||||||||||||||||| || ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27623683 --ctctctccaaactcaataccaaagttgattccatcgccacgcacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 27623780  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  27623781 tctcaaacaccaggagtcttt 27623801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 24173697 - 24173479
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||||||||||||||||||  ||||||| |   | ||||| |||| |||||| ||||||||||||||||||||||  ||||||||||| ||||    
T  24173697 gctcagaaatcaagtttggaaattttaatggaaaactatgtcatgaaccaaactaaacagcttcaagagctcaaaaaccaaatcggatttctgaatgaat 24173598  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    |||| ||||||||||  ||||||||||| ||||  || || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24173597 ctctttccaaactcaccaccaaggtagactctaatgctacccacactaaaatgcttgagacccaaatctcccaagtgacccaacaagtggccacctcttc 24173498  T
Q  221 tcaaacactaggagtcttt 239  Q
    ||||||||  |||||||||    
T  24173497 tcaaacaccgggagtcttt 24173479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 21893856 - 21893987
Alignment:
Q  108 tttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaag 207  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  21893856 tttctgaacgactctctctccaaactcactaccaaggttgattctatcgccacacacaccaaaatgcttgatacccaaatctcccaagtggcccaacaag 21893955  T
Q  208 tggccacctcttctcaaacactaggagtcttt 239  Q
    |||||||||||||||||||||  |||||||||    
T  21893956 tggccacctcttctcaaacaccgggagtcttt 21893987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 25147996 - 25147925
Alignment:
Q  156 gccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttctcaaaca 227  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25147996 gccacacacaccaaaatgcttgagacccaaatctcccaagtggcctaacaagtggccacctcttctcaaaca 25147925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 226
Target Start/End: Original strand, 25354048 - 25354196
Alignment:
Q  78 caacttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttg 177  Q
    ||||| |||||||| |||||||||||||||||| |||| || |||||  ||||| |||   |||||||||| || || || || |||| ||| || |||     
T  25354048 caactccaagagcttaaaaaccaaacgggatttttgaatgactctcttgccaaaatcacatccaaggtagactccatagcaactcacaataagatactta 25354147  T
Q  178 agacccaaatctcccaagtggcccaacaagtggccacctcttctcaaac 226  Q
    | ||||||||||| |||||||||||||| ||| | || || ||||||||    
T  25354148 aaacccaaatctctcaagtggcccaacacgtgactacttcctctcaaac 25354196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 25591255 - 25591211
Alignment:
Q  168 aaaatgcttgagacccaaatctcccaagtggcccaacaagtggcc 212  Q
    |||||||||||||| |||||||| ||||| |||||||||||||||    
T  25591255 aaaatgcttgagactcaaatctctcaagtagcccaacaagtggcc 25591211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 29953705 - 29953749
Alignment:
Q  168 aaaatgcttgagacccaaatctcccaagtggcccaacaagtggcc 212  Q
    ||||||||||| || |||||||| ||||| |||||||||||||||    
T  29953705 aaaatgcttgacactcaaatctctcaagtagcccaacaagtggcc 29953749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 20 - 239
Target Start/End: Original strand, 116946 - 117165
Alignment:
Q  20 ggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaa 119  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  116946 ggctcagaaatcaagtttggaaattttgttagaaaattgcatgatgaatcaaaataaaaaacttcaagagctcaaaaaccaaacgggatttctgaacgac 117045  T
Q  120 tctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctctt 219  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  117046 tctctctccaaactcaataccaaggtagattctatagccacacacaccaaaatgcttgagacccaaatctcccaagtggcctaccaagtggccacctctt 117145  T
Q  220 ctcaaacactaggagtcttt 239  Q
    |||||||||| |||||||||    
T  117146 ctcaaacactgggagtcttt 117165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 182; Significance: 2e-98; HSPs: 2)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 6303 - 6094
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  6303 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagaactgaaaaaccaaacaggatttctgaacga 6204  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6203 ctctctctccaaactcactaccaaggttgattctatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 6104  T
Q  219 tctcaaacac 228  Q
    ||||||||||    
T  6103 tctcaaacac 6094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 60 - 228
Target Start/End: Original strand, 10112 - 10274
Alignment:
Q  60 atgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaata--ccaaggtagattctatcgc 157  Q
    ||||||| ||||||||||||||||||||||||| | |        ||||| |||||||| |||||||||||||||||||  ||||||||||||||||| |    
T  10112 atgatgagtcaaaataaacaacttcaagagctccaga--------ggattcctgaacgattctctctccaaactcaatataccaaggtagattctatctc 10203  T
Q  158 cacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttctcaaacac 228  Q
    | |||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||    
T  10204 cgcacacactaaaatgcttgagactcaaatcttccaagtgggccaacaagtggccacctcttctcaaacac 10274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 9646 - 9426
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9646 tggctcagaaatcaagtttggaaattttgttagtaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 9547  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||| |||||||| | ||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9546 ctctctttccaaacttactaccaaggttgattctatcgccacacacaccaaaatgcttgagacccaaatttcccaagtggcccaacaagtggccacctct 9447  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||||||  |||||||||    
T  9446 tctcaaacaccgggagtcttt 9426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 177; Significance: 2e-95; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 15858100 - 15858320
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  15858100 tggctcagaaatcaagttaggaaattttgttagaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgagatttttgaacga 15858199  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||||||||||||||||||||||||||| ||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  15858200 ttctctctccaaactcaataccaaggtagattctatagccacacacaccaaatttcttgagacccaaatctcccaagtggcccaacaagtggccacctct 15858299  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||||||  |||||||||    
T  15858300 tctcaaacaccgggagtcttt 15858320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 5751 - 5531
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  5751 tggctcagaaatcaagtttggaaattttgttggaaaattgtatgatgaatcaaaataaacaacttcaagaactgaaaaaccaaacaggatttctgaacga 5652  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     | ||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5651 ctatctctccaaacacactaccaaggttgattctatcgccacacacactaaaatgcttgagacccagatctcccaagtggcccaacaagtggccacctct 5552  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||||||  |||||||||    
T  5551 tctcaaacaccgggagtcttt 5531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 15250324 - 15250542
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    |||||||||||||||||||| |||||| |||||||||||||| |||||||||| |||||||||||||| || ||||||||||| |||||||||||||| |    
T  15250324 gctcagaaatcaagtttggagattttgctggaaaattgcatgttgaatcaaaacaaacaacttcaagaactgaaaaaccaaacaggatttctgaacgact 15250423  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  15250424 ctctctccaaactcaataccaaggttgattctatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccatgtcttc 15250523  T
Q  221 tcaaacactaggagtcttt 239  Q
    |||||||| ||||||||||    
T  15250524 tcaaacaccaggagtcttt 15250542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 1369 - 1151
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| |||| ||||||||| |    
T  1369 gctcagaaatctagtttggaaatactgttggaaaattgcatgatgaatcaaaataaacaacttcaggagttaaaaaaccaaacaggatctctgaacgact 1270  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1269 ctctctccaagctcaataccaaggttgattccatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccatctcttc 1170  T
Q  221 tcaaacactaggagtcttt 239  Q
    |||||||| ||||||||||    
T  1169 tcaaacaccaggagtcttt 1151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 15264319 - 15264099
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||| ||||||||||||||| |||||||| |||||||||||    ||||||||||||   |||||||| || ||||||||||||||||||||||||||    
T  15264319 tggctccgaaatcaagtttggagattttgttagaaaattgcatagccaatcaaaataaaagtcttcaagaactgaaaaaccaaacgggatttctgaacga 15264220  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||| |||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15264219 ctctctctccaagctcactaccaaggttgattctatcgccacacacaccaaaatgcttgagacccaaatctcccaagtagcccaacaagtggccacctct 15264120  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  15264119 tctcaaacaccaggagtcttt 15264099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 22106951 - 22107171
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| |||||  |||||||||||||    |||||||||||| | ||||||||  | ||||||||||| ||||||||||||||    
T  22106951 tggctcagaaatcaagtttggagattttactggaaaattgcattgcaaatcaaaataaaaatcttcaagaattgaaaaaccaaacaggatttctgaacga 22107050  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||||||||||||||| || ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22107051 ctctctctccaaactcaataccaaagttgattccatcgccacgcacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 22107150  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  22107151 tctcaaacaccaggagtcttt 22107171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 15303981 - 15304201
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||| ||||||| ||| | ||||||||||||||    |||||||||||| | |||||||| || |||||||||||  |||||||||||||    
T  15303981 tggctcagaaatcatgtttggagattctattggaaaattgcatagctaatcaaaataaaaatcttcaagaactgaaaaaccaaacaagatttctgaacga 15304080  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15304081 ctctctctccaaactcactaccaaggttgattccatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagttgccacctct 15304180  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  15304181 tctcaaacaccaggagtcttt 15304201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 16678467 - 16678571
Alignment:
Q  123 ctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttctc 222  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  16678467 ctctccaaactcactactaaggttgattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtagccacctcttccc 16678566  T
Q  223 aaaca 227  Q
    |||||    
T  16678567 aaaca 16678571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 211
Target Start/End: Complemental strand, 11920536 - 11920347
Alignment:
Q  22 ctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaatc 121  Q
    ||||| |||| ||||||||| ||||  |||||| ||   | |||||||||  ||| || || ||| |||| ||||||||||| |||||| |||| || ||    
T  11920536 ctcagcaatctagtttggaacttttaatggaaagttatgtcatgaatcaatctaagcagctccaatagcttaaaaaccaaaccggatttatgaatgactc 11920437  T
Q  122 tctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggc 211  Q
    ||| |||||||||||| | |||||||||||||| || || || |||||||||||||| |  || |||||||||||||||||||| |||||    
T  11920436 tctttccaaactcaattctaaggtagattctattgctactcatactaaaatgcttgaaaatcatatctcccaagtggcccaacaggtggc 11920347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 10824220 - 10824347
Alignment:
Q  78 caacttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttg 177  Q
    ||||| |||||||| ||||||||||| |||||| |||| || |||||  ||||| |||   |||||||||| || || || || |||| ||| || ||||    
T  10824220 caactccaagagcttaaaaaccaaactggatttttgaatgactctcttgccaaaatcacatccaaggtagactccatagcaactcacaataagatacttg 10824319  T
Q  178 agacccaaatctcccaagtggcccaaca 205  Q
    | ||||||||||| ||||||||||||||    
T  10824320 aaacccaaatctctcaagtggcccaaca 10824347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 14226227 - 14226266
Alignment:
Q  167 taaaatgcttgagacccaaatctcccaagtggcccaacaa 206  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  14226227 taaaatgcttgagacacaaatatcccaagtggcccaacaa 14226266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 45332 - 45112
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  45332 tggctcagaaatcaagtttggaaattttgttggaaaattgtatgatgaatcaaaataaacaacttcaagaactgaaaaaccaaacaggatttctgaacga 45233  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     | ||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  45232 ctatctctccaaacacactaccaaggttgattctatcgccacacacactaaaatgcttgagacccagatctcccaagtggcccaacaagtggccacctct 45133  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||||||  |||||||||    
T  45132 tctcaaacaccgggagtcttt 45112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 367587 - 367367
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||  |||||||||||||    
T  367587 tggctcataaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagaactgaaaaacaaaacatgatttctgaacga 367488  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  367487 ctctctctccaaactcactaccaaggttgattctatcgccacacacactaaaatgctcgagacccaaatctcccaagtggcccaacaagtggccacctct 367388  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||||||  |||||||||    
T  367387 tctcaaacaccgggagtcttt 367367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 173; Significance: 4e-93; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 22321682 - 22321462
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  22321682 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagaactaaaaaaccaaacaggatttctgaacga 22321583  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||| ||||||||||  |||||||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||    
T  22321582 ctctctatccaaactcaccaccaaggttgattctatcgccacacacaccaaaatgctcgaaacccaaatctcccaagtggcccaacaagtggccacctct 22321483  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  22321482 tctcaaacaccaggagtcttt 22321462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 21276379 - 21276159
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||| |    
T  21276379 tggctcagaaatcaagtttggaaattttgttagaaaattgcatgatgaatcaaaataaacaacttcaaaagctcaaaaaccaaactgaatttctgaacaa 21276280  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||||||||||||| ||||||| ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21276279 ctctctctccaaactcaatacctaggtagactctatagccacagacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 21276180  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||||||  |||||||||    
T  21276179 tctcaaacaccgggagtcttt 21276159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 23 - 239
Target Start/End: Complemental strand, 20442425 - 20442209
Alignment:
Q  23 tcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaatct 122  Q
    |||||||||||||||||||||||||||||||||||||||    |||||||||||| | |||||||| || |||||||||||||||||||||||||| |||    
T  20442425 tcagaaatcaagtttggaaattttgttggaaaattgcatagctaatcaaaataaaaatcttcaagaactgaaaaaccaaacgggatttctgaacgactct 20442326  T
Q  123 ctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttctc 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20442325 ctctccaaactcactaccaaggttgattctatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttctc 20442226  T
Q  223 aaacactaggagtcttt 239  Q
    |||||| ||||||||||    
T  20442225 aaacaccaggagtcttt 20442209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 21274832 - 21274612
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||| |    
T  21274832 tggctcagaaatcaagtttggaaattttgttagaaaattgcatgatgaatcaaaataaacaacttcaaaagctcaaaaaccaaactgaatttctgaacaa 21274733  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||||||||||||| ||||||| ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21274732 ctctctctccaaactcaatacctaggtagactctatagccacagacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagaggccacctct 21274633  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||||||  |||||||||    
T  21274632 tctcaaacaccgggagtcttt 21274612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 20618153 - 20618371
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||| |||| ||| | ||||||||||| |||| ||| ||||| |    
T  20618153 gctcagaaatctagtttggaaatactgttggaaaattgcatgatgaatcaaaataaacaaattcaggagttaaaaaaccaaacaggatctctaaacgact 20618252  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  20618253 ctctctccaagctcaataccaaggttgattccatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcctaacaagtggccatctcttc 20618352  T
Q  221 tcaaacactaggagtcttt 239  Q
    |||||||| ||||||||||    
T  20618353 tcaaacaccaggagtcttt 20618371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 24967426 - 24967206
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| |||||  |||||||||||||    |||||||||||| | ||||||||  | ||||||||||| ||||||||||||||    
T  24967426 tggctcagaaatcaagtttggagattttactggaaaattgcattgcaaatcaaaataaaaatcttcaagaattgaaaaaccaaacaggatttctgaacga 24967327  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||||||||||||||| || ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24967326 ctctctctccaaactcaataccaaagttgattccatcgccacgcacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 24967227  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  24967226 tctcaaacaccaggagtcttt 24967206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 30767356 - 30767136
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| ||||||||||||||||||||    || ||||||||| | |||||||| || ||||||||||| ||||||||||||||    
T  30767356 tggctcagaaatcaagtttggagattttgttggaaaattgcatagctaaacaaaataaaaatcttcaagaactgaaaaaccaaacaggatttctgaacga 30767257  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||| ||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |||||    
T  30767256 ctctctctccaaactcactactaaggttgattctatcgccacacacaccaaaatgcttgagacctaaatctcccaagtggcccaacaagtggcatcctct 30767157  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  30767156 tctcaaacaccaggagtcttt 30767136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 19 - 227
Target Start/End: Complemental strand, 25120421 - 25120213
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||  || |||||||||||| | ||||||||||||||||||||||| |||||||| || ||||| || |||||||||||  |||||||||||||    
T  25120421 tggctcagaggtctagtttggaaattctattggaaaattgcatgatgaatcagaataaacagctccaagaactaaaaaaccaaacaagatttctgaacga 25120322  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| |||||||||||||||||||| |||||||| || |||||||||||||||| ||| |||||||| |||||||||    
T  25120321 ctctctctccaaactcactaccaaggttgattctatcgccacacacaccaaaatgctcgaaacccaaatctcccaagaggctcaacaagtagccacctct 25120222  T
Q  219 tctcaaaca 227  Q
    || ||||||    
T  25120221 tcccaaaca 25120213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 19 - 227
Target Start/End: Complemental strand, 25179512 - 25179304
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||  || |||||||||||| | ||||||||||||||||||||||| |||||||| || ||||| || |||||||||||  |||||||||||||    
T  25179512 tggctcagaggtctagtttggaaattctattggaaaattgcatgatgaatcagaataaacagctccaagaactaaaaaaccaaacaagatttctgaacga 25179413  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| |||||||||||||||||||| |||||||| || |||||||||||||||| ||| |||||||| |||||||||    
T  25179412 ctctctctccaaactcactaccaaggttgattctatcgccacacacaccaaaatgctcgaaacccaaatctcccaagaggctcaacaagtagccacctct 25179313  T
Q  219 tctcaaaca 227  Q
    || ||||||    
T  25179312 tcccaaaca 25179304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 74 - 239
Target Start/End: Original strand, 21384319 - 21384485
Alignment:
Q  74 taaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccaca-cacactaaaat 172  Q
    |||||| || ||||| |||||||||||||| | ||||||||| |  ||||| |||||||||||||| ||||||||||||||||||||  |||||||||||    
T  21384319 taaacagctccaagaactcaaaaaccaaactgaatttctgaatggttctctttccaaactcaatactaaggtagattctatcgccacttcacactaaaat 21384418  T
Q  173 gcttgagacccaaatctcccaagtggcccaacaagtggccacctcttctcaaacactaggagtcttt 239  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  21384419 gcttgagacccaaatatcccaagtggcccaacaagtggccacctcttctcaaacaccgggagtcttt 21384485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 21283877 - 21283750
Alignment:
Q  78 caacttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttg 177  Q
    ||||| |||||||| ||||||||||| |||||| |||| || |||||  ||||| |||   |||||||||| || || || || |||| ||| || ||||    
T  21283877 caactccaagagcttaaaaaccaaactggatttttgaatgactctcttgccaaaatcacatccaaggtagactccatagcaactcacaataagatacttg 21283778  T
Q  178 agacccaaatctcccaagtggcccaaca 205  Q
    | ||||||||||| ||||||||||||||    
T  21283777 aaacccaaatctctcaagtggcccaaca 21283750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 24217014 - 24217141
Alignment:
Q  78 caacttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttg 177  Q
    ||||| |||||||| ||||||||||| |||||| |||| || |||||  ||||| |||   |||||||||| || || || || |||| ||| || ||||    
T  24217014 caactccaagagcttaaaaaccaaactggatttttgaatgactctcttgccaaaatcacatccaaggtagactccatagcaactcacaataagatacttg 24217113  T
Q  178 agacccaaatctcccaagtggcccaaca 205  Q
    | ||||||||||| ||||||||||||||    
T  24217114 aaacccaaatctctcaagtggcccaaca 24217141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 226
Target Start/End: Complemental strand, 20599472 - 20599330
Alignment:
Q  84 caagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagaccc 183  Q
    |||||||| |||||||||||||||||| |||| || |||||  ||||| |||   |||||||||| || || || || |||| ||| || ||| | ||||    
T  20599472 caagagcttaaaaaccaaacgggatttttgaatgattctcttgccaaaatcacatccaaggtagactccatagcaactcacaataagatacttaaaaccc 20599373  T
Q  184 aaatctcccaagtggcccaacaagtggccacctcttctcaaac 226  Q
    ||||||| |||||||||||||| ||| | || || ||||||||    
T  20599372 aaatctctcaagtggcccaacacgtgactacttcctctcaaac 20599330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 226
Target Start/End: Complemental strand, 20605769 - 20605627
Alignment:
Q  84 caagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagaccc 183  Q
    |||||||| |||||||||||||||||| |||| || |||||  ||||| |||   |||||||||| || || || || |||| ||| || ||| | ||||    
T  20605769 caagagcttaaaaaccaaacgggatttttgaatgattctcttgccaaaatcacatccaaggtagactccatagcaactcacaataagatacttaaaaccc 20605670  T
Q  184 aaatctcccaagtggcccaacaagtggccacctcttctcaaac 226  Q
    ||||||| |||||||||||||| ||| | || || ||||||||    
T  20605669 aaatctctcaagtggcccaacacgtgactacttcctctcaaac 20605627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 226
Target Start/End: Complemental strand, 20612088 - 20611946
Alignment:
Q  84 caagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagaccc 183  Q
    |||||||| |||||||||||||||||| |||| || |||||  ||||| |||   |||||||||| || || || || |||| ||| || ||| | ||||    
T  20612088 caagagcttaaaaaccaaacgggatttttgaatgattctcttgccaaaatcacatccaaggtagactccatagcaactcacaataagatacttaaaaccc 20611989  T
Q  184 aaatctcccaagtggcccaacaagtggccacctcttctcaaac 226  Q
    ||||||| |||||||||||||| ||| | || || ||||||||    
T  20611988 aaatctctcaagtggcccaacacgtgactacttcctctcaaac 20611946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 226
Target Start/End: Complemental strand, 20794377 - 20794235
Alignment:
Q  84 caagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagaccc 183  Q
    |||||||| |||||||||||||||||| |||| || |||||  ||||| |||   |||||||||| || || || || |||| ||| || ||| | ||||    
T  20794377 caagagcttaaaaaccaaacgggatttttgaatgactctcttgccaaaatcacatccaaggtagactccatagcaactcacaataagatacttaacaccc 20794278  T
Q  184 aaatctcccaagtggcccaacaagtggccacctcttctcaaac 226  Q
    ||||||| |||||||||||||| ||| | || || ||||||||    
T  20794277 aaatctctcaagtggcccaacacgtgactacttcctctcaaac 20794235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 226
Target Start/End: Original strand, 18069467 - 18069615
Alignment:
Q  78 caacttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttg 177  Q
    ||||| |||||||| ||||||||||| |||||| |||| || |||||  ||||| |||   |||||||||| || || || || |||| ||| || ||      
T  18069467 caactccaagagcttaaaaaccaaacaggatttttgaatgactctcttgccaaaatcacatccaaggtagactccatagcaactcacaataagatactca 18069566  T
Q  178 agacccaaatctcccaagtggcccaacaagtggccacctcttctcaaac 226  Q
    | ||||||||||| |||||||||||||| ||| | || || ||||||||    
T  18069567 aaacccaaatctctcaagtggcccaacacgtgactacttcctctcaaac 18069615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 20931624 - 20931585
Alignment:
Q  167 taaaatgcttgagacccaaatctcccaagtggcccaacaa 206  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  20931624 taaaatgcttgagacgcaaatatcccaagtggcccaacaa 20931585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 173; Significance: 4e-93; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 14455230 - 14455010
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||    
T  14455230 tggctcagaaatcaagtttggaaattttgttagaaaattgcatgatgaatcaaaataaacaacttcaagaactaaaaaaccaaatgggatttctgaacga 14455131  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||| ||||||||||||||||||||||||||||| || |||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14455130 ctctctttccaaactcaataccaaggtagattctatagcaacacgcacaaaaatgcttgagacccaaatctcccaagtggcccaacaattggccacctct 14455031  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  14455030 tctcaaacaccaggagtcttt 14455010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 21 - 227
Target Start/End: Complemental strand, 14069781 - 14069575
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  14069781 gctcagaaatcaagtttggaaattttgttggaaaactgcatgatgagccaaaataaacaacttcaagagctcaaaaaccaaatgggatttctgaacgatt 14069682  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
     |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  14069681 ttctctccaaactgaataccaaggtagattttatcgccacacacactaaaatgcttgagacccaaatctctcaagtgacccaacaagtggccacctcttc 14069582  T
Q  221 tcaaaca 227  Q
    |||||||    
T  14069581 tcaaaca 14069575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 12380648 - 12380868
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||| || |||||||||||| |||| ||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||| | |||||    
T  12380648 tggctcagaagtctagtttggaaattctgtttgaaaattgcatgatgaatcaaaataaataacttcaagaactgaaaaaccaaacgggatttttcaacga 12380747  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  12380748 ctctctctccaaactcactaccaaggttgattctatcgccacacacactaaaatgcttgaaacccaaatctcccaagtggcccaacaagtagccacctct 12380847  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  12380848 tctcaaacaccaggagtcttt 12380868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 11878567 - 11878349
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| |||| ||||||||| |    
T  11878567 gctcagaaatctagtttggaaatactgttggaaaattgcatgatgaatcaaaataaacaacttcaggagttaaaaaaccaaacaggatctctgaacgact 11878468  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11878467 ctctctccaagctcaataccaaggttgattccatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccatctcttc 11878368  T
Q  221 tcaaacactaggagtcttt 239  Q
    |||||||| ||||||||||    
T  11878367 tcaaacaccaggagtcttt 11878349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 13075464 - 13075684
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| | |||||||| || ||||||||||| |||||| |||||||    
T  13075464 tggctcagaaatcaagtttggagattttgttggaaaattgcatatctaatcaaaataaaaatcttcaagaactgaaaaaccaaacaggatttttgaacga 13075563  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13075564 ctctctctccaaactcactaccaaggttgattctatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacgagtggccacctct 13075663  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||||||||||||||    
T  13075664 tctcaaacactaggagtcttt 13075684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 13510589 - 13510369
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||    |||||||||||| | ||||||||||| ||||||||||||||||||||||||||    
T  13510589 tggctcaaaaatcaagtttggagattttattggaaaattgcatagccaatcaaaataaaaatcttcaagagctgaaaaaccaaacgggatttctgaacga 13510490  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13510489 ctctctctccaaactcactaccaaggttgattctattgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 13510390  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  13510389 tctcaaacaccaggagtcttt 13510369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 10143051 - 10143269
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||| |||||||||||  |||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||| ||||||||| |    
T  10143051 gctcagaaatctagtttggaaatcatgttagaaaattgcatgatgaatcaaaataaacaacttcaagagttaaaaaaccaaacaggatctctgaacgact 10143150  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  10143151 ctctctccaagctcaataccaaggttgattccatcgccacacacaccaaaatgcttgaaacacaaatctcccaagtggcccaacaagtggccacctcttc 10143250  T
Q  221 tcaaacactaggagtcttt 239  Q
    |||||||| ||||||||||    
T  10143251 tcaaacaccaggagtcttt 10143269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 15641066 - 15641284
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| |||| ||||||||| |    
T  15641066 gctcagaaatctagtttggaaatactgttggaaaattgcatgatgaatcaaaataaacaacttcaggagttaaaaaaccaaacaggatctctgaacgact 15641165  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  15641166 ctctctccaagctcaataccaaggttgattccatcgccacacacaccaaaatgcttgagacctaaatctcccaagtggcccaacaagtggccatctcttc 15641265  T
Q  221 tcaaacactaggagtcttt 239  Q
    |||||||| ||||||||||    
T  15641266 tcaaacaccaggagtcttt 15641284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 13191621 - 13191412
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||| |||||||||    
T  13191621 tggctcagaaatctagtttggaaataatgttggaaaattgcatgatgaatcaaaataaacaacttcaagagttaaaaaaccaaacaggatctctgaacga 13191522  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||| |||||||||||||| || || |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13191521 ctctctctccaagctcaataccaaggttgactccatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccagcaagtggccacctct 13191422  T
Q  219 tctcaaacac 228  Q
    ||||||||||    
T  13191421 tctcaaacac 13191412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 10164407 - 10164187
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||| |||||||||||  |||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||  ||| |||||||||    
T  10164407 tggctcagaaatctagtttggaaataatgttagaaaattgcatgatgaatcaaaataaacaacttcaagagttaaaaaaccaaacaagatctctgaacga 10164308  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  10164307 ctctctctccaagctcaataccaaggttgattccatcgccacacacaccaaaatgcttgaaacccaaatctcccaagtagcccaacaagtggccacctct 10164208  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  10164207 tctcaaacaccaggagtcttt 10164187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 13200905 - 13200685
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||    
T  13200905 tggctcagaaatctagtttggaaattctgttggaaaattgcatgatgaatcagaataaacaacttcaagaactgaaaaaccaaacgggatttctgaacga 13200806  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||| ||| ||| ||||| |||||||||||||||||||| || ||||| || ||||||| ||||||||||| |||||||||||||||||||    
T  13200805 ctctctctccaaagtcactactaaggttgattctatcgccacacacaccaagatgctcgaaacccaaagctcccaagtggtccaacaagtggccacctct 13200706  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  13200705 tctcaaacaccaggagtcttt 13200685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 12191054 - 12190834
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||| |||||||||||  |||| ||||| ||||||||||||||||||||||||||||||||| | ||||||||||| |||| |||||||||    
T  12191054 tggctcagaaatctagtttggaaataatgttagaaaactgcatgatgaatcaaaataaacaacttcaagagttaaaaaaccaaacaggatctctgaacga 12190955  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||| |||||||||||||| ||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  12190954 ctctctctccaagctcaataccaaggttgattccatcgccacacacaccaaaatacttgagactcaaatctcccaagtggcccaacaagtggccacctct 12190855  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||||||  |||||||||    
T  12190854 tctcaaacaccgggagtcttt 12190834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 12197698 - 12197478
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||| |||||||||||  |||| ||||| ||||||||||||||||||||||||||||||||| | ||||||||||| |||| |||||||||    
T  12197698 tggctcagaaatctagtttggaaataatgttagaaaactgcatgatgaatcaaaataaacaacttcaagagttaaaaaaccaaacaggatctctgaacga 12197599  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||| |||||||||||||| ||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  12197598 ctctctctccaagctcaataccaaggttgattccatcgccacacacaccaaaatacttgagactcaaatctcccaagtggcccaacaagtggccacctct 12197499  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||||||  |||||||||    
T  12197498 tctcaaacaccgggagtcttt 12197478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 11867190 - 11866970
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||| ||||  |||||||||||  |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||  ||||||||    
T  11867190 tggctcataaatatagtttggaaataatgttggaaaattgcatgatgaatcaaaataaacaacttcaagagttaaaaaaccaaacaggatccctgaacga 11867091  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  11867090 ctctctctccaagctcaataccaaggttgattccatcgccacacacaccaaaatgcttgaaacacaaatctcccaagtggcccaacaagtggccacctct 11866991  T
Q  219 tctcaaacactaggagtcttt 239  Q
    || ||||||| ||||||||||    
T  11866990 tcccaaacaccaggagtcttt 11866970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 13140405 - 13140185
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||| ||| |||||||| ||||  |||| ||||||||||| ||||||||| | ||||||||  | ||||||||||| ||||||||||||||    
T  13140405 tggctcagaaatctagtctggaaattctgttaaaaaactgcatgatgaaccaaaataaaaatcttcaagaattgaaaaaccaaacaggatttctgaacga 13140306  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  13140305 ctctctctccaaactcaataccaaggttgattctatcgccacacacaccaaaatgcttgagacctaaatctcccaagtggcccaacaagtggccgcctct 13140206  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  13140205 tctcaaacaccaggagtcttt 13140185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 58 - 227
Target Start/End: Original strand, 17451938 - 17452107
Alignment:
Q  58 gcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgc 157  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||    
T  17451938 gcatgatgaatcaaaataaacaacttcaagaactgaaaaaccaaacgggatttctgaacgactctctctccaaactcactaccaaggttgattctatcgc 17452037  T
Q  158 cacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttctcaaaca 227  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  17452038 cacacacattaaaatgcttgagacccaaatctcccaagtggcccaaaaagtagccacctcttcccaaaca 17452107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 15633139 - 15632958
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||| ||| |||||||| ||||||| || ||||||||||| ||||||||| | ||||||||  | ||||||||||| |||||||| |||||    
T  15633139 tggctcagaaatctagtctggaaattatgttggagaactgcatgatgaaccaaaataaaaatcttcaagaattgaaaaaccaaacaggatttctaaacga 15633040  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcc 200  Q
     |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15633039 ctctctctccaaactcaataccaaggttgattctatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcc 15632958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 226
Target Start/End: Complemental strand, 10606168 - 10606026
Alignment:
Q  84 caagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagaccc 183  Q
    |||||||| ||||||||||| | |||| |||| || |||||  ||||| |||   |||||||||| || || || || |||| | | || ||||| ||||    
T  10606168 caagagcttaaaaaccaaactgaatttttgaatgactctcttgccaaaatcacatccaaggtagactccatagcaactcacaatgagatacttgaaaccc 10606069  T
Q  184 aaatctcccaagtggcccaacaagtggccacctcttctcaaac 226  Q
    ||||||| |||||||||||||| ||| | || || ||||||||    
T  10606068 aaatctctcaagtggcccaacacgtgactacttcctctcaaac 10606026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 19 - 227
Target Start/End: Original strand, 6087 - 6296
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagct-caaaaaccaaacgggatttctgaacg 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||    
T  6087 tggctcagaaatctagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagaattgcaaaaaccaaacgggatttctgaacg 6186  T
Q  118 aatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctc 217  Q
    | |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6187 actctctctccaaactcactaccaaggttgattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtagccacctc 6286  T
Q  218 ttctcaaaca 227  Q
    ||| ||||||    
T  6287 ttcccaaaca 6296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 169; Significance: 9e-91; HSPs: 2)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 552 - 332
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  552 tggctcagaaatcaagtttggaaattttgttgtaaaattgcatgatgaatcaaaataaacaacttcaagaactgaaaaaccaaacaggatttctgaacga 453  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||| ||| ||||||||| |||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  452 ctctctctccaaagtcactaccaaggttgattgtatcgccacacacaccaaaatgtttgagacccaaatctcccaagtggcccaacaagtggccacctct 353  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||||||||||  |||||||||    
T  352 tctcaaacaccgggagtcttt 332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 7687 - 7470
Alignment:
Q  22 ctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaatc 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||    
T  7687 ctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagaactgaaaaaccaaacaggatttctgaacgactc 7588  T
Q  122 tctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttct 221  Q
    |||||||||||||| ||||||||| ||||||||||| |||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  7587 tctctccaaactcactaccaaggttgattctatcgctacacacaccaaaatgcttcagaccgaaatctcccaagtggcccaacaagtggccacctcttct 7488  T
Q  222 caaacactaggagtcttt 239  Q
    || ||||  |||||||||    
T  7487 catacaccgggagtcttt 7470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 26490 - 26708
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||||||||||||||||||||||||    |||||||||||| | || ||||| || ||||||||||| ||||||||||||||    
T  26490 tggctcagaaatcaagtttggaaattttgttggaaaattgcatagctaatcaaaataaaaatctccaagaactgaaaaaccaaacaggatttctgaacga 26589  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
      ||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26590 --ctctctccaaactcactaccaaggttgattctatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 26687  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||||||||||||||    
T  26688 tctcaaacactaggagtcttt 26708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 17314 - 17534
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  17314 tggctctgaaatcaagtttagaaaatttgttggaaaattgcatgatgaatcaaaataaacaacttcaagaactgaaaaaccaaaaaggatttctgaacga 17413  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  17414 ctctctctccaaactcactaccaaggttgattctatcgccacacacaccaaaatgcttgagagccaaatctccgaagtggcccaacaagtggccacctct 17513  T
Q  219 tctcaaacactaggagtcttt 239  Q
    ||| ||||||  |||||||||    
T  17514 tctgaaacaccgggagtcttt 17534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 21 - 200
Target Start/End: Complemental strand, 37053 - 36874
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  37053 gctcagaaatcaagtttggaaattttattggaaaactgcatgatgagccaaaataaacaacttcaagagctcaaaaaccaaacgggacttctgaacgatt 36954  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcc 200  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  36953 ctctctccaaactcaatactaaggtagattctatcgcgacacacactaaaattcttgagacccaaatctcccaagtggcc 36874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 28603 - 28424
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||| ||||||||||||||    
T  28603 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagaattgaaaaaccaaacaggatttctgaacga 28504  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcc 200  Q
     |||||||||||||||| ||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  28503 ctctctctccaaactcactaccaaggttgattctatcgccac--acactaaaatgcttgagacccaaatctcccaagtggcc 28424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 20567 - 20787
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| | |||||||| || ||||||||||| ||||||||||||||    
T  20567 tggctcagaaatcaagtttggagattttgttggaaaattgcatagctaatcaaaataaaaatcttcaagaactgaaaaaccaaacaggatttctgaacga 20666  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     ||||||||||| |||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||  |||||    
T  20667 ctctctctccaagctcaatactaaggtcgattctatcgccactcacaccaaaatgcttgagacccaaatctcccaagtggcctaacaagtggctgcctct 20766  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  20767 tctcaaacaccaggagtcttt 20787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 2968 - 2750
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |  |||| || || ||||||||||| ||||||||||||||    
T  2968 tggctcagaaatcaagtttggagattttgttggaaaattgcatagctaatcaaaataaaaattttcatgaactgaaaaaccaaacaggatttctgaacga 2869  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||| ||||||||| ||||||||||||||||||   |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2868 ctctctctccaaactcactaccaaggttgattctatcgccacacacc--aaaatgcttgagacccaaatcttccaagtggcccaacaagtggccacctct 2771  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  2770 tctcaaacaccaggagtcttt 2750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 7288 - 7508
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    |||||||||||||||||||||| ||||| ||||||||||||||    |||||||||||| | ||||||||  | ||||||||||| ||||||||||||||    
T  7288 tggctcagaaatcaagtttggagattttattggaaaattgcattgctaatcaaaataaaaatcttcaagaattgaaaaaccaaacaggatttctgaacga 7387  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||| |||||||| || ||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  7388 ctctctctccaaactaaataccaaagttgattcaatcgccacacacaccaaaatgcttgagacccaaatatcccaagtggcccaacaagtggccaactct 7487  T
Q  219 tctcaaacactaggagtcttt 239  Q
    |||||||||| ||||||||||    
T  7488 tctcaaacaccaggagtcttt 7508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 119367 - 119573
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||| ||  |||||||| |||||||||| |||||||||||||||||| || | ||||||||  | |||| |||||| ||||||||||||||    
T  119367 tggctcagaaatctagcctggaaattctgttggaaaactgcatgatgaatcaaaattaaaatcttcaagaattgaaaacccaaacaggatttctgaacga 119466  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctct 218  Q
     |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  119467 ctctctctccaaactcaataccaaggttgattctatcgccacacacaccaaaatgcttgagactcaaatctcccaagtggccaaacaagtggccacctct 119566  T
Q  219 tctcaaa 225  Q
    |||||||    
T  119567 tctcaaa 119573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 35465 - 35683
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    |||||||||||||||||| | ||||| ||||||||||||||    |||||||||||| | ||||||||  | ||||||||||| |||||||||| | | |    
T  35465 gctcagaaatcaagtttgaagattttattggaaaattgcattgctaatcaaaataaaaatcttcaagaattaaaaaaccaaacaggatttctgagcaact 35564  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    ||||||||||||||||||||||||| ||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35565 ctctctccaaactcaataccaaggttgatttcatcgccacacacaccaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 35664  T
Q  221 tcaaacactaggagtcttt 239  Q
    |||||||| | ||||||||    
T  35665 tcaaacaccaagagtcttt 35683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0759 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 457 - 276
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||| ||||||||| || ||||||||||||||||||||||||| ||||||||||| ||||| || |||| |||||| ||||||||||||||    
T  457 tggctcagaaatctagtttggaagttctgttggaaaattgcatgatgaatcagaataaacaactccaagaactaaaaagccaaacaggatttctgaacga 358  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcc 200  Q
     |||||||||||||||| ||||||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  357 ctctctctccaaactcactaccaaggttgattctatcgccacacacactaaaattctcgaaacccaaatctcccaagtggcc 276  T

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Target: scaffold0750 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 19 - 166
Target Start/End: Original strand, 2240 - 2387
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  2240 tggctcagaaaccaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagaactgaaaaaccaaacaggatttctgaacga 2339  T
Q  119 atctctctccaaactcaataccaaggtagattctatcgccacacacac 166  Q
     |||||||||||||||| ||||||||| ||||||||||||||||||||    
T  2340 ctctctctccaaactcactaccaaggttgattctatcgccacacacac 2387  T

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Target: scaffold1058 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold1058
Description:

Target: scaffold1058; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 1167 - 949
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaat 120  Q
    ||||||||||||||||||||||||||   ||| |  |   | ||||| |||  |||||| || ||||| | |||||||||||| ||||||||||| || |    
T  1167 gctcagaaatcaagtttggaaattttaaaggagagctatgtcatgaaccaatctaaacagctccaagaacacaaaaaccaaaccggatttctgaatgatt 1068  T
Q  121 ctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttc 220  Q
    |||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||    
T  1067 ctctttccaaactcaatactaaggtagattctatcgccactcacactaaaatgcttgagacccaaatctcccaagtggcctaacaagtggctaccccttc 968  T
Q  221 tcaaacactaggagtcttt 239  Q
    |||||||| | ||||||||    
T  967 tcaaacaccaagagtcttt 949  T

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Target: scaffold0012 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 188207 - 188340
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||  |||||||||||||    
T  188207 tggctcagaaatcaagtttggaaattttgttggaaaattgcatcatgaatcaaaataaacaacttcaagaactgaaaaaccaaacatgatttctgaacga 188306  T
Q  119 atctctctccaaactcaataccaaggtagattct 152  Q
     |||||||||||||||| ||||||||| ||||||    
T  188307 ctctctctccaaactcactaccaaggttgattct 188340  T

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Target: scaffold0833 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 1468 - 1350
Alignment:
Q  120 tctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctctt 219  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  1468 tctctctccaaactcactaccagggttgattctatcgccacacacactaaaatgctcgagacccaaatctccc-agtggcccaacaagtggccacctctt 1370  T
Q  220 ctcaaacactaggagtcttt 239  Q
    |||||||||  |||||||||    
T  1369 ctcaaacaccgggagtcttt 1350  T

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Target: scaffold0031 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 25832 - 25910
Alignment:
Q  19 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25832 tggctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaaccaaaataaacaacttcaagagctcaaaaa 25910  T

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Target: scaffold0634 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 868 - 801
Alignment:
Q  21 gctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaaga 88  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  868 gctcaaaaatcaagtttggaaattttgttggaaaattgtatgatgaatcaaaataaacaacttcaaga 801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 205
Target Start/End: Original strand, 23579 - 23762
Alignment:
Q  22 ctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaatc 121  Q
    |||| ||||| ||||||||||||||  ||||||  |   | |||||||||  |||| | || |||||||||||||||||||| ||||||||||| || ||    
T  23579 ctcataaatctagtttggaaattttaatggaaagctatgtcatgaatcaatctaaatagctccaagagctcaaaaaccaaaccggatttctgaatgattc 23678  T
Q  122 tctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggcccaaca 205  Q
    ||| |||||||||||| | || ||||| ||| | || ||  |  ||||||||||||| || |||||||||||||||||||||||    
T  23679 tctttccaaactcaattctaaagtagactctgttgctactaattctaaaatgcttgaaactcaaatctcccaagtggcccaaca 23762  T

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Target: scaffold0556 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 280 - 339
Alignment:
Q  180 acccaaatctcccaagtggcccaacaagtggccacctcttctcaaacactaggagtcttt 239  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||    
T  280 acccaaatctcccaagtggcccaacaagtggtcacctcttctctaacaccaggagtcttt 339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 202
Target Start/End: Original strand, 524104 - 524284
Alignment:
Q  22 ctcagaaatcaagtttggaaattttgttggaaaattgcatgatgaatcaaaataaacaacttcaagagctcaaaaaccaaacgggatttctgaacgaatc 121  Q
    |||||||||| ||||||||||||||  ||||||  |   | |||||||||  ||||||  | |||||||| ||||||  ||| ||||||||||| || ||    
T  524104 ctcagaaatctagtttggaaattttaatggaaagctatgtcatgaatcaatctaaacagttccaagagcttaaaaactcaaccggatttctgaatgattc 524203  T
Q  122 tctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttgagacccaaatctcccaagtggccca 202  Q
    |||  ||||||||||| | || || || ||||| || || || ||||| |||||||| || ||||||||||||||| ||||    
T  524204 tcttaccaaactcaattctaaagtggactctattgctactcatactaagatgcttgaaactcaaatctcccaagtgaccca 524284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 53743 - 53616
Alignment:
Q  78 caacttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttg 177  Q
    ||||| |||||||| ||||||||||| |||||| |||| || |||||  ||||| |||   |||||||||| || || || || |||| ||| || ||||    
T  53743 caactccaagagcttaaaaaccaaactggatttttgaatgactctcttgccaaaatcacatccaaggtagactccatagcaactcacaataagatacttg 53644  T
Q  178 agacccaaatctcccaagtggcccaaca 205  Q
    | ||||||||||| ||||||||||||||    
T  53643 aaacccaaatctctcaagtggcccaaca 53616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 226
Target Start/End: Original strand, 14903 - 15051
Alignment:
Q  78 caacttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttg 177  Q
    ||||| |||||||| ||||||||||| |||||| |||| || |||||  ||||| |||   |||||||||| || || || || |||| ||| || ||      
T  14903 caactccaagagcttaaaaaccaaacaggatttttgaatgactctcttgccaaaatcacatccaaggtagactccatagcaactcacaataagatactca 15002  T
Q  178 agacccaaatctcccaagtggcccaacaagtggccacctcttctcaaac 226  Q
    | ||||||||||| |||||||||||||| ||| | || || ||||||||    
T  15003 aaacccaaatctctcaagtggcccaacacgtgactacttcctctcaaac 15051  T

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Target: scaffold0029 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 226
Target Start/End: Original strand, 119948 - 120096
Alignment:
Q  78 caacttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttg 177  Q
    ||||| |||||||| ||||||||||| | |||| |||| || |||||  ||||| |||   |||||||||| || || || || |||| | | || ||||    
T  119948 caactccaagagcttaaaaaccaaactgaatttttgaatgactctcttgccaaaatcacatccaaggtagactccatagcaactcacaatgagatacttg 120047  T
Q  178 agacccaaatctcccaagtggcccaacaagtggccacctcttctcaaac 226  Q
    | ||||||||||| |||||||||||||| ||| | || || ||||||||    
T  120048 aaacccaaatctctcaagtggcccaacacgtgactacttcctctcaaac 120096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 34946 - 34985
Alignment:
Q  167 taaaatgcttgagacccaaatctcccaagtggcccaacaa 206  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  34946 taaaatgcttgagacacaaatatcccaagtggcccaacaa 34985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 38917 - 39044
Alignment:
Q  78 caacttcaagagctcaaaaaccaaacgggatttctgaacgaatctctctccaaactcaataccaaggtagattctatcgccacacacactaaaatgcttg 177  Q
    ||||| |||||||| ||||||||||| | |||| |||| || |||||  ||||| |||   |||||||||| || || || || |||| | | || ||||    
T  38917 caactccaagagcttaaaaaccaaactgaatttttgaatgactctcttgccaaaatcacatccaaggtagactccatagcaactcacaatgagatacttg 39016  T
Q  178 agacccaaatctcccaagtggcccaaca 205  Q
    | ||||||||||| ||||||||||||||    
T  39017 aaacccaaatctctcaagtggcccaaca 39044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1184 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1184
Description:

Target: scaffold1184; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 1699 - 1641
Alignment:
Q  168 aaaatgcttgagacccaaatctcccaagtggcccaacaagtggccacctcttctcaaac 226  Q
    |||||| | ||||| |||||||| ||||| |||||||||||||| ||||| ||||||||    
T  1699 aaaatgttagagactcaaatctctcaagtagcccaacaagtggctacctcctctcaaac 1641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0860 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0860
Description:

Target: scaffold0860; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 4844 - 4798
Alignment:
Q  162 cacactaaaatgcttgagacccaaatctcccaagtggcccaacaagt 208  Q
    |||| ||||||||||||||| |||||||| ||||| |||||||||||    
T  4844 cacattaaaatgcttgagactcaaatctctcaagtagcccaacaagt 4798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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