View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2124_high_1 (Length: 869)

Name: NF2124_high_1
Description: NF2124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2124_high_1
NF2124_high_1
[»] chr4 (13 HSPs)
chr4 (18-864)||(3254051-3254894)
chr4 (671-784)||(28497486-28497600)
chr4 (684-778)||(35555831-35555927)
chr4 (580-766)||(47611741-47611929)
chr4 (678-784)||(54470203-54470311)
chr4 (696-776)||(29398822-29398903)
chr4 (682-784)||(17900476-17900580)
chr4 (703-774)||(42639224-42639296)
chr4 (703-784)||(51252665-51252747)
chr4 (722-778)||(31459032-31459089)
chr4 (696-784)||(41192832-41192921)
chr4 (722-778)||(55768724-55768781)
chr4 (722-778)||(55832980-55833037)
[»] chr1 (13 HSPs)
chr1 (665-784)||(2544595-2544716)
chr1 (671-811)||(35828721-35828863)
chr1 (710-784)||(27848016-27848091)
chr1 (695-784)||(43423715-43423805)
chr1 (671-777)||(36339974-36340082)
chr1 (695-778)||(48431602-48431686)
chr1 (664-742)||(10569231-10569310)
chr1 (695-809)||(19908235-19908350)
chr1 (703-784)||(1661426-1661508)
chr1 (731-784)||(52561843-52561897)
chr1 (703-783)||(8343062-8343143)
chr1 (711-815)||(9509283-9509388)
chr1 (710-778)||(32404737-32404806)
[»] chr2 (13 HSPs)
chr2 (671-784)||(43752118-43752233)
chr2 (710-767)||(9578914-9578972)
chr2 (678-778)||(23714439-23714541)
chr2 (678-778)||(24102111-24102213)
chr2 (671-742)||(3481180-3481252)
chr2 (729-784)||(18958903-18958959)
chr2 (711-778)||(45367837-45367905)
chr2 (704-778)||(8180782-8180857)
chr2 (663-784)||(12141540-12141663)
chr2 (704-778)||(25834683-25834758)
chr2 (678-744)||(42543272-42543339)
chr2 (755-811)||(11017285-11017339)
chr2 (722-778)||(19024182-19024239)
[»] chr6 (5 HSPs)
chr6 (671-784)||(14389339-14389453)
chr6 (589-784)||(9593797-9593992)
chr6 (710-778)||(608159-608228)
chr6 (77-166)||(12645044-12645133)
chr6 (710-810)||(33084028-33084129)
[»] chr5 (12 HSPs)
chr5 (672-784)||(79509-79623)
chr5 (700-784)||(33667212-33667297)
chr5 (711-788)||(31636132-31636210)
chr5 (699-815)||(6888958-6889075)
chr5 (729-784)||(14667759-14667815)
chr5 (730-778)||(27895-27944)
chr5 (695-815)||(6859346-6859467)
chr5 (703-811)||(14749276-14749385)
chr5 (682-768)||(42199298-42199386)
chr5 (744-810)||(37124539-37124603)
chr5 (664-784)||(2712940-2713062)
chr5 (710-778)||(28676597-28676666)
[»] chr3 (10 HSPs)
chr3 (721-811)||(54365199-54365287)
chr3 (679-784)||(36820140-36820247)
chr3 (707-784)||(50960841-50960919)
chr3 (721-784)||(26490311-26490375)
chr3 (671-776)||(42510187-42510292)
chr3 (725-784)||(44134056-44134116)
chr3 (721-788)||(27917562-27917630)
chr3 (589-811)||(39600770-39600994)
chr3 (711-778)||(49503766-49503834)
chr3 (721-783)||(54128375-54128438)
[»] chr8 (12 HSPs)
chr8 (671-778)||(36143367-36143476)
chr8 (729-809)||(45512725-45512808)
chr8 (703-811)||(44681243-44681352)
chr8 (663-777)||(43904828-43904947)
chr8 (679-811)||(44373745-44373879)
chr8 (721-778)||(18752098-18752155)
chr8 (730-815)||(33511325-33511407)
chr8 (721-784)||(41444548-41444612)
chr8 (729-811)||(13171879-13171962)
chr8 (712-766)||(41971991-41972046)
chr8 (721-778)||(45419239-45419297)
chr8 (671-815)||(10824335-10824477)
[»] chr7 (9 HSPs)
chr7 (678-784)||(48736077-48736185)
chr7 (682-784)||(36514389-36514493)
chr7 (698-778)||(36101964-36102045)
chr7 (721-784)||(7189448-7189512)
chr7 (695-778)||(42187472-42187556)
chr7 (721-778)||(26742118-26742176)
chr7 (721-778)||(40169651-40169709)
chr7 (723-784)||(47848670-47848732)
chr7 (698-743)||(16013326-16013371)
[»] scaffold0018 (1 HSPs)
scaffold0018 (710-784)||(44079-44154)


Alignment Details
Target: chr4 (Bit Score: 683; Significance: 0; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 683; E-Value: 0
Query Start/End: Original strand, 18 - 864
Target Start/End: Complemental strand, 3254894 - 3254051
Alignment:
Q  18 actatgtgggggagagaagtgtaaagaacctgagtatcacggttgttgtaggctaacacatctttgacatataaatggatatcatggatgtcaatgtatg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3254894 actatgtgggggagagaagtgtaaagaacctgagtatcacggttgttgtaggctaacacatctttgacatataaatggatatcatggatgtcaatgtatg 3254795  T
Q  118 gcaccaaatttcccaagtaaccaagagtgatccatggatagtaccaaaaagaaaagttgcatgaccctgcgcgccatgagaaattaaaccagatttgaga 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||     ||||||||||||    
T  3254794 gcaccaaatttcccaagtaaccaagagtgatccatggatagtaccaaaaagaagagttacatgaccctgcgcgccatgagaaa-----ccagatttgaga 3254700  T
Q  218 taattttttgcatgaattatggtggaccaagtggtggagttactaggccacgtagtagcatacagaagacatgcgccatcatcatacttatcggagagga 317  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3254699 taattttttgcatgaattatggtggatcaagtggtggagttactaggccgagtagtagcatacagaagacatgcgccatcatcatacttatcggagagga 3254600  T
Q  318 gatcaacccataatttattagaatattgaaacatatcctaaactagcttctcaaggagacatgtgttggtttctt-----------attcctaggccacc 406  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||            ||||||||||||||    
T  3254599 gatcaacccataatttattagaagattggaacatatcccaaactagcttctcaaggagacatgtgttggtttctctggctgttctgattcctaggccacc 3254500  T
Q  407 ttcatatatatacttgggtctaacaaatatttttaagaaaggaaaactaaagagtgttggaaaaaataggaaagagaaattacaaaataacaacaacaaa 506  Q
    ||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3254499 ttcata------cttgggtctaacaaatatttttaagaaaggaaaactaaagagtgttggaaaaaataggaaagagaaattacaaaataacaacaacaaa 3254406  T
Q  507 caaccaaataattttccactaaatagcaatgactatatgaatcaaacaacgtcacagtattctataataacttatattttggtccaactcactaacctct 606  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  3254405 caaccaaataattttcgactaaatagcaatgactacatgaatcaaacaacgttacagtattctataataacttatattttggtccaactcactaatctct 3254306  T
Q  607 tagtgattcctaatagtttctcttaaaaaatttctagttcttcatctatcttgaagaatttgattatccttcatttgatctaccctcctactacataatc 706  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  3254305 tagtgattcctaatagtttctcttaaaatttttctagttcttcatctatcttgaagaatctgattatccttcatttgatctaccctcctactacataatt 3254206  T
Q  707 cataggtcttcacactacatgtccaaaccacctaagttattttccatcatcttttctactaaaggtgctaccacaactttcttattaatattttcatttc 806  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3254205 cataggtcttcacactatatgtccaaaccacctaagctattttccatcatcttttctactaaaggtgctaccacaactttcttattaatattttcatttc 3254106  T
Q  807 taatcatatgatctcatatattcttacgacaaaagaacctaacattctcgtctctgct 864  Q
    |||||||   |||||||| |||||||||||||||||||||||||||||||||||||||    
T  3254105 taatcat---atctcatacattcttacgacaaaagaacctaacattctcgtctctgct 3254051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 671 - 784
Target Start/End: Complemental strand, 28497600 - 28497486
Alignment:
Q  671 tatccttcatttgatctaccctcct-actacataatccataggtcttcacactacatgtccaaaccacctaagttattttccatcatcttttctactaaa 769  Q
    |||||| ||| |||||||| ||||| ||||||||||| | | |||||| | ||||||| ||||||||||||||   |||||||  |||||||||||||||    
T  28497600 tatcctccatctgatctactctccttactacataatctacaagtcttctctctacatgcccaaaccacctaagcctttttccacaatcttttctactaaa 28497501  T
Q  770 ggtgctaccacaact 784  Q
    ||||||||| |||||    
T  28497500 ggtgctaccccaact 28497486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 684 - 778
Target Start/End: Original strand, 35555831 - 35555927
Alignment:
Q  684 atctaccctccta-ctacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctacc 778  Q
    |||||| |||||| ||||| |||||| |||||||| | ||| ||| ||||||||||||||| || |||| | |||||||||||||| ||||||||||    
T  35555831 atctactctcctaactacagaatccacaggtcttctctctaaatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctacc 35555927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 766
Target Start/End: Complemental strand, 47611929 - 47611741
Alignment:
Q  580 atattttggtccaactcactaacctcttagtgattcctaatagtttctcttaaaaaatttctagttcttcatctatcttgaagaatttgattatccttca 679  Q
    |||||||||||||||||| ||  ||| ||||  ||||||||||||||  ||| ||  ||||||| ||||| |||  ||  |||  | ||| | |||| ||    
T  47611929 atattttggtccaactcattagtctcctagtctttcctaatagtttcaattataatttttctaggtcttcctctgcctctaagggtctgactctcctcca 47611830  T
Q  680 tttgatctaccctcct-actacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctact 766  Q
    | |||| ||| ||||| | |||| ||||  ||||||||| | ||||||| ||||||||||||||  |||||||||||||||||||||||    
T  47611829 tctgatttactctccttattacaaaatctctaggtcttctctctacatgcccaaaccacctaagcctattttccatcatcttttctact 47611741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 678 - 784
Target Start/End: Complemental strand, 54470311 - 54470203
Alignment:
Q  678 catttgatctaccctcct-actacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgct 775  Q
    |||||||| ||| ||||| ||||||||||  | | |||||| | ||||||| ||||||||| ||||| || |||||| |||||||||||||| |||||||    
T  54470311 catttgatttactctccttactacataatttacatgtcttctctctacatgcccaaaccacttaagtctagtttccaccatcttttctactataggtgct 54470212  T
Q  776 accacaact 784  Q
    ||| |||||    
T  54470211 accccaact 54470203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 696 - 776
Target Start/End: Complemental strand, 29398903 - 29398822
Alignment:
Q  696 actacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgcta 776  Q
    |||||| |||| |||||||||| | ||||||| ||||||||| ||||  ||||||||| |||||||||||| | ||||||||    
T  29398903 actacagaatctataggtcttctctctacatgcccaaaccacataagcatattttccaccatcttttctaccataggtgcta 29398822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 682 - 784
Target Start/End: Complemental strand, 17900580 - 17900476
Alignment:
Q  682 tgatctaccctccta-ctacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctacca 779  Q
    |||||||| |||||| |||||||||||| |||||||| | |||| || ||||||||| | ||| || |||| | | |||||||||||| ||||||||||     
T  17900580 tgatctactctcctatctacataatccacaggtcttctctctacgtgcccaaaccacatgagtctagtttctaccgtcttttctactataggtgctaccc 17900481  T
Q  780 caact 784  Q
    |||||    
T  17900480 caact 17900476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 703 - 774
Target Start/End: Original strand, 42639224 - 42639296
Alignment:
Q  703 aatccataggtcttcacactacatgtccaaaccacctaag-ttattttccatcatcttttctactaaaggtgc 774  Q
    |||||||| |||||| | ||||||||||||||||||||||  |  |||||| |||||||||||||| ||||||    
T  42639224 aatccataagtcttctctctacatgtccaaaccacctaagcctggtttccaccatcttttctactataggtgc 42639296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 703 - 784
Target Start/End: Original strand, 51252665 - 51252747
Alignment:
Q  703 aatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaact 784  Q
    |||||| | |||||| | ||||||| ||| ||||||||||  || |||||| |||||||||||||| |||||||||| |||||    
T  51252665 aatccacatgtcttctctctacatgcccataccacctaagcctagtttccaccatcttttctactagaggtgctaccccaact 51252747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 778
Target Start/End: Complemental strand, 31459089 - 31459032
Alignment:
Q  722 tacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctacc 778  Q
    |||||| ||||||||||||||  ||||||| | |||||||||||||| ||||||||||    
T  31459089 tacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacc 31459032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 696 - 784
Target Start/End: Complemental strand, 41192921 - 41192832
Alignment:
Q  696 actacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaact 784  Q
    |||||| |||| | |||||||| | |||||||  |||| ||||||||| || |||||| |||||||||||||  |||||||||| |||||    
T  41192921 actacagaatctacaggtcttctctctacatgcacaaatcacctaagtctagtttccaccatcttttctactgtaggtgctaccccaact 41192832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 778
Target Start/End: Original strand, 55768724 - 55768781
Alignment:
Q  722 tacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctacc 778  Q
    |||||||| |||||||||||   |||||||||| ||||||||||||| ||||||||||    
T  55768724 tacatgtctaaaccacctaaacctattttccatgatcttttctactataggtgctacc 55768781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 778
Target Start/End: Original strand, 55832980 - 55833037
Alignment:
Q  722 tacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctacc 778  Q
    |||||||| |||||||||||   |||||||||| ||||||||||||| ||||||||||    
T  55832980 tacatgtctaaaccacctaaacctattttccatgatcttttctactataggtgctacc 55833037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 1e-21; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 665 - 784
Target Start/End: Complemental strand, 2544716 - 2544595
Alignment:
Q  665 tttgattatccttcatttgatctaccctcct-actacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttc 762  Q
    ||||| |||||| ||| |||||||| ||||| |||| | |||| |||||||||| | ||||||||||||||||||||||| | ||||||| |||||||||    
T  2544716 tttgactatcctccatctgatctactctccttactatagaatctataggtcttctctctacatgtccaaaccacctaagtctgttttccaccatcttttc 2544617  T
Q  763 tactaaaggtgctaccacaact 784  Q
    ||||| |||||||||| |||||    
T  2544616 tactataggtgctaccccaact 2544595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 671 - 811
Target Start/End: Original strand, 35828721 - 35828863
Alignment:
Q  671 tatccttcatttgatctaccctcct-actacataatccataggtcttcacactacatgtccaaaccacctaa-gttattttccatcatcttttctactaa 768  Q
    |||||| ||| |||||| | ||||| ||||||||||| |||||||||| | ||||| |||||||||||||||   ||||||||| |||||||||||| |     
T  35828721 tatcctccatatgatcttctctccttactacataatctataggtcttctctctacacgtccaaaccacctaaccctattttccaccatcttttctaccat 35828820  T
Q  769 aggtgctaccacaactttcttattaatattttcatttctaatc 811  Q
    |||||||||   |||| |||   ||||||| ||||||||||||    
T  35828821 aggtgctactcaaactctctctctaatattgtcatttctaatc 35828863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 710 - 784
Target Start/End: Original strand, 27848016 - 27848091
Alignment:
Q  710 aggtcttcacactacatgtccaaaccacctaag-ttattttccatcatcttttctactaaaggtgctaccacaact 784  Q
    |||||||| | || |||| |||||||||||||| |||||||| | |||||||||||| | ||||||||||||||||    
T  27848016 aggtcttctctctgcatgcccaaaccacctaagcttattttctaccatcttttctaccacaggtgctaccacaact 27848091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 695 - 784
Target Start/End: Complemental strand, 43423805 - 43423715
Alignment:
Q  695 tactacataatccataggtcttcacactacatgtccaaaccacctaag-ttattttccatcatcttttctactaaaggtgctaccacaact 784  Q
    |||||||||||| | | |||||| | ||||||| ||||||||||||||  || |||||| |||||||||||||| ||||| |||| |||||    
T  43423805 tactacataatctacaagtcttctctctacatggccaaaccacctaagcctagtttccaccatcttttctactataggtgttaccccaact 43423715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 671 - 777
Target Start/End: Original strand, 36339974 - 36340082
Alignment:
Q  671 tatccttcatttgatctaccctcct-actacataatccataggtcttcacactacatgtccaaaccacct-aagttattttccatcatcttttctactaa 768  Q
    |||||| ||| ||||| |||| ||| |||||| |||| |||||||||| | || |||||| ||||||||| ||  ||||||||| ||||||||||| ||     
T  36339974 tatcctccatctgatcaacccgccttactacaaaatctataggtcttctctctccatgtctaaaccacctaaacctattttccaccatcttttctaatat 36340073  T
Q  769 aggtgctac 777  Q
    |||||||||    
T  36340074 aggtgctac 36340082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 695 - 778
Target Start/End: Original strand, 48431602 - 48431686
Alignment:
Q  695 tactacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctacc 778  Q
    ||||||| |||| | | |||||| | ||||||| ||||||||||||||  ||||||||| |||||||||||||| ||| ||||||    
T  48431602 tactacaaaatctacaagtcttctctctacatgcccaaaccacctaagcctattttccaccatcttttctactataggggctacc 48431686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 742
Target Start/End: Original strand, 10569231 - 10569310
Alignment:
Q  664 atttgattatccttcatttgatctaccctcc-tactacataatccataggtcttcacactacatgtccaaaccacctaag 742  Q
    ||||||||| ||| ||| | ||||||||||| ||||||| |||| | |||||||| | ||||||| ||||||||||||||    
T  10569231 atttgattaccctccatctaatctaccctccgtactacagaatctacaggtcttctctctacatgcccaaaccacctaag 10569310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 695 - 809
Target Start/End: Original strand, 19908235 - 19908350
Alignment:
Q  695 tactacataatccataggtcttcacactacatgtccaaaccacctaag-ttattttccatcatcttttctactaaaggtgctaccacaactttcttatta 793  Q
    |||||||||||| | |||| ||| | ||||||| ||||| |||||||  ||  |||||  |||||||| ||||| |||||||||||||||| |||  |||    
T  19908235 tactacataatctacaggttttctctctacatgcccaaatcacctaaacttggtttcccccatcttttttactataggtgctaccacaactctctcttta 19908334  T
Q  794 atattttcatttctaa 809  Q
    || || ||||||||||    
T  19908335 attttgtcatttctaa 19908350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 703 - 784
Target Start/End: Complemental strand, 1661508 - 1661426
Alignment:
Q  703 aatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaact 784  Q
    |||| |||||||||| | |||||||  ||||||| || ||  ||||||||| |||||||||||||| |||||||||| |||||    
T  1661508 aatctataggtcttctctctacatgctcaaaccatctgagcctattttccaccatcttttctactataggtgctaccccaact 1661426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 731 - 784
Target Start/End: Original strand, 52561843 - 52561897
Alignment:
Q  731 aaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaact 784  Q
    ||||||||||||  ||||||| |||||| |||||||||||||||||||| |||||    
T  52561843 aaaccacctaagcctattttctatcatcatttctactaaaggtgctaccccaact 52561897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 703 - 783
Target Start/End: Original strand, 8343062 - 8343143
Alignment:
Q  703 aatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaac 783  Q
    |||||| |||||||| | ||||||| |||  |||||||||  || |||||| |||||||||||||||||||| |||| ||||    
T  8343062 aatccacaggtcttctctctacatgcccagtccacctaagcctagtttccaccatcttttctactaaaggtgttaccccaac 8343143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 815
Target Start/End: Complemental strand, 9509388 - 9509283
Alignment:
Q  711 ggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaactttcttattaatattttcatttctaa 809  Q
    ||||||| | ||||||| |||||| |||||||  ||||||  | |||||||||||||| |||||||||| ||||| |||   ||||  | ||||||||||    
T  9509388 ggtcttctctctacatgcccaaactacctaagcctattttttaccatcttttctactataggtgctaccccaactctctctctaatggtgtcatttctaa 9509289  T
Q  810 tcatat 815  Q
    ||||||    
T  9509288 tcatat 9509283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 778
Target Start/End: Original strand, 32404737 - 32404806
Alignment:
Q  710 aggtcttcacactacatgtccaaaccacctaag-ttattttccatcatcttttctactaaaggtgctacc 778  Q
    |||||||| | |||||| |||||||||||||||  ||||||||| |||||||| ||||| ||||| ||||    
T  32404737 aggtcttctctctacatatccaaaccacctaagcctattttccaccatcttttttactataggtgttacc 32404806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 6e-18; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 671 - 784
Target Start/End: Original strand, 43752118 - 43752233
Alignment:
Q  671 tatccttcatttgatctaccctcc-tactacataatccataggtcttcacactacatgtccaaaccacctaag-ttattttccatcatcttttctactaa 768  Q
    |||||| ||| |||||||| |||| |||||||||||| |||||||||| | ||||||||||||| ||||||||  ||||||| | || |||||||||||     
T  43752118 tatcctccatctgatctactctccctactacataatctataggtcttctctctacatgtccaaatcacctaagcctattttctaccaccttttctactat 43752217  T
Q  769 aggtgctaccacaact 784  Q
    |||||||||| |||||    
T  43752218 aggtgctaccccaact 43752233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 710 - 767
Target Start/End: Original strand, 9578914 - 9578972
Alignment:
Q  710 aggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctacta 767  Q
    |||||||| | ||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  9578914 aggtcttctctctacatgtccaaaccacctaagtctattttacatcatctttactacta 9578972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 678 - 778
Target Start/End: Original strand, 23714439 - 23714541
Alignment:
Q  678 catttgatctaccctcct-actacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgct 775  Q
    |||||||||||| ||||| ||||||||||||| | |||||| | ||||||| | |||| || ||||| || |||||| |||||||||||||| | |||||    
T  23714439 catttgatctactctccttactacataatccacaagtcttctctctacatgcctaaactacataagtctagtttccaccatcttttctactatatgtgct 23714538  T
Q  776 acc 778  Q
    |||    
T  23714539 acc 23714541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 678 - 778
Target Start/End: Original strand, 24102111 - 24102213
Alignment:
Q  678 catttgatctaccctcct-actacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgct 775  Q
    |||||||||||| ||||| ||||||||||||| | |||||| | ||||||| | |||| || ||||| || |||||| |||||||||||||| | |||||    
T  24102111 catttgatctactctccttactacataatccacaagtcttctctctacatgcctaaactacataagtctagtttccaccatcttttctactatatgtgct 24102210  T
Q  776 acc 778  Q
    |||    
T  24102211 acc 24102213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 671 - 742
Target Start/End: Complemental strand, 3481252 - 3481180
Alignment:
Q  671 tatccttcatttgatctaccctccta-ctacataatccataggtcttcacactacatgtccaaaccacctaag 742  Q
    |||||| ||| |||||||| |||||  ||||| |||| |||||||||| | ||||||||||||||||||||||    
T  3481252 tatcctccatctgatctactctccttgctacagaatctataggtcttctctctacatgtccaaaccacctaag 3481180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 729 - 784
Target Start/End: Complemental strand, 18958959 - 18958903
Alignment:
Q  729 ccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaact 784  Q
    ||||||||||||||  ||||||||| |||||||||||||| |||||||||| |||||    
T  18958959 ccaaaccacctaagcctattttccaccatcttttctactataggtgctaccccaact 18958903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 711 - 778
Target Start/End: Original strand, 45367837 - 45367905
Alignment:
Q  711 ggtcttcacactacatgtccaaaccacctaag-ttattttccatcatcttttctactaaaggtgctacc 778  Q
    ||||||| | |||||||||||||||| ||||| |||||||| | || ||||||||||| ||||||||||    
T  45367837 ggtcttctctctacatgtccaaaccatctaaggttattttctaccaacttttctactataggtgctacc 45367905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 778
Target Start/End: Complemental strand, 8180857 - 8180782
Alignment:
Q  704 atccataggtcttcacactacatgtccaaaccacctaag-ttattttccatcatcttttctactaaaggtgctacc 778  Q
    ||||| |||||||| | ||||||| |||||||| ||||| |||||||| | || ||||||||||| ||||||||||    
T  8180857 atccacaggtcttctctctacatgcccaaaccatctaagcttattttctaccaacttttctactataggtgctacc 8180782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 663 - 784
Target Start/End: Complemental strand, 12141663 - 12141540
Alignment:
Q  663 aatttgattatccttcatttgatctaccctcct-actacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttt 760  Q
    ||||||| ||||||  || |||||||| ||||| |||| | |||| | ||||||||   |||| || ||||||||||||||  | ||||||| |||||||    
T  12141663 aatttgactatcctcaatctgatctactctccttactagagaatctacaggtcttctttctacgtgcccaaaccacctaagcctcttttccaccatcttt 12141564  T
Q  761 tctactaaaggtgctaccacaact 784  Q
    ||||||| |||||||||| |||||    
T  12141563 tctactataggtgctaccccaact 12141540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 778
Target Start/End: Complemental strand, 25834758 - 25834683
Alignment:
Q  704 atccataggtcttcacactacatgtccaaaccacctaag-ttattttccatcatcttttctactaaaggtgctacc 778  Q
    ||||| |||||||| | |||||||||||||||| |||||  ||||||| | || ||||||||||| ||||||||||    
T  25834758 atccacaggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 25834683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 678 - 744
Target Start/End: Complemental strand, 42543339 - 42543272
Alignment:
Q  678 catttgatctaccctccta-ctacataatccataggtcttcacactacatgtccaaaccacctaagtt 744  Q
    |||||||||||| |||||| ||||| |||||| |||||||| |  |||||| ||||||||||||||||    
T  42543339 catttgatctactctcctaactacagaatccacaggtcttctctgtacatgcccaaaccacctaagtt 42543272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 755 - 811
Target Start/End: Complemental strand, 11017339 - 11017285
Alignment:
Q  755 atcttttctactaaaggtgctaccacaactttcttattaatattttcatttctaatc 811  Q
    ||||||||||||| |||||||||| ||||| |||  |||||||||||||| ||||||    
T  11017339 atcttttctactataggtgctacctcaactctct--ttaatattttcattcctaatc 11017285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 778
Target Start/End: Complemental strand, 19024239 - 19024182
Alignment:
Q  722 tacatgtccaaaccacctaag-ttattttccatcatcttttctactaaaggtgctacc 778  Q
    ||||||||||||||||||||| ||| |||||| ||||||||| | || ||||||||||    
T  19024239 tacatgtccaaaccacctaagcttactttccaccatcttttcaaatataggtgctacc 19024182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 671 - 784
Target Start/End: Original strand, 14389339 - 14389453
Alignment:
Q  671 tatccttcatttgatctaccctcct-actacataatccataggtcttcacactacatgtccaaaccacctaagttattttccatcatcttttctactaaa 769  Q
    |||||| ||| |||||||  ||||| |||||| | || |||||||||| | ||||||||||||||||||||||||  |||||| |||||||||||| | |    
T  14389339 tatcctccatctgatctattctccttactacaaagtctataggtcttctctctacatgtccaaaccacctaagtttgtttccaccatcttttctacgata 14389438  T
Q  770 ggtgctaccacaact 784  Q
    ||||||||| |||||    
T  14389439 ggtgctacctcaact 14389453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 589 - 784
Target Start/End: Original strand, 9593797 - 9593992
Alignment:
Q  589 tccaactcactaacctcttagtgattcctaatagtttctcttaaaaaatttctagttcttcatcta--tcttgaagaatttgattatccttcatttgatc 686  Q
    ||||||||| ||| |||| |||  ||||||||||||||||||| ||  ||||||| ||||| ||||  ||||||    ||||| | |||| ||| |||||    
T  9593797 tccaactcattaatctctaagtctttcctaatagtttctcttataatttttctaggtcttcctctacctcttga----tttgactctcctccatctgatc 9593892  T
Q  687 taccctcct-actacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaact 784  Q
    ||| || || ||||||  ||| | | |||||| | ||||||| ||||||||||||||  ||||||| | ||||||||||||||| ||||||||| |||||    
T  9593893 tactcttcttactacagcatctacatgtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactaatggtgctaccccaact 9593992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 778
Target Start/End: Complemental strand, 608228 - 608159
Alignment:
Q  710 aggtcttcacactacatgtccaaaccacctaag-ttattttccatcatcttttctactaaaggtgctacc 778  Q
    |||||||| | |||||||||||||||| |||||  ||||||| |||| ||||||||||| ||||| ||||    
T  608228 aggtcttctctctacatgtccaaaccatctaagcctattttctatcaacttttctactataggtgatacc 608159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 166
Target Start/End: Original strand, 12645044 - 12645133
Alignment:
Q  77 atctttgacatataaatggatatcatggatgtcaatgtatggcaccaaatttcccaagtaaccaagagtgatccatggatagtaccaaaa 166  Q
    |||||||||  | ||||| |||||||||||||||||||| || |||||| |||| || ||||| | | || |||| ||||||||| ||||    
T  12645044 atctttgacggacaaatgaatatcatggatgtcaatgtaaggtaccaaagttcctaaataacccaaattggtccacggatagtacgaaaa 12645133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 810
Target Start/End: Complemental strand, 33084129 - 33084028
Alignment:
Q  710 aggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaactttcttattaatattttcatttcta 808  Q
    |||||||| | ||||||  ||||||||||||||| || |||| | |||||||||||| | |||||||||| ||||| |||   ||||||  |||||||||    
T  33084129 aggtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctaccataggtgctaccccaactctctctctaatatcgtcatttcta 33084030  T
Q  809 at 810  Q
    ||    
T  33084029 at 33084028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 672 - 784
Target Start/End: Complemental strand, 79623 - 79509
Alignment:
Q  672 atccttcatttgatctaccctcct-actacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaa 769  Q
    ||||| ||||||||| || ||||| |||||| |||| |||||||||| | ||||||||||||||||||||| | | ||||||| |||||||||||||| |    
T  79623 atcctccatttgatcgactctccttactacagaatctataggtcttctctctacatgtccaaaccacctaattatgttttccaccatcttttctactata 79524  T
Q  770 ggtgctaccacaact 784  Q
    ||| ||||| |||||    
T  79523 ggtactaccccaact 79509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 700 - 784
Target Start/End: Complemental strand, 33667297 - 33667212
Alignment:
Q  700 cataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaact 784  Q
    ||||||||| |||||||| | ||||||| ||||||||||||||| || |||| | |||||||||||||| |||||||||| |||||    
T  33667297 cataatccacaggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaact 33667212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 711 - 788
Target Start/End: Original strand, 31636132 - 31636210
Alignment:
Q  711 ggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaactttct 788  Q
    ||||||| | ||||||| ||||||||||||||| || |||| | |||||||||||||| |||||||||| |||||||||    
T  31636132 ggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaactttct 31636210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 699 - 815
Target Start/End: Complemental strand, 6889075 - 6888958
Alignment:
Q  699 acataatccataggtcttcacactacatgtccaaaccacctaag-ttattttccatcatcttttctactaaaggtgctaccacaactttcttattaatat 797  Q
    |||||||||| | |||||| | ||||||||||||||||| ||||  ||||||||| |||||||||  ||| | |||||||| ||||| | |   ||||||    
T  6889075 acataatccacaagtcttctctctacatgtccaaaccacttaagcctattttccaccatcttttcctctatacgtgctaccccaactctttctgtaatat 6888976  T
Q  798 tttcatttctaatcatat 815  Q
    | ||||||||||||||||    
T  6888975 tgtcatttctaatcatat 6888958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 729 - 784
Target Start/End: Complemental strand, 14667815 - 14667759
Alignment:
Q  729 ccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaact 784  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||||||||| |||||    
T  14667815 ccaaaccacctaagtctattttccaccatcttttctactataggtgctaccccaact 14667759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 730 - 778
Target Start/End: Complemental strand, 27944 - 27895
Alignment:
Q  730 caaaccacctaagt-tattttccatcatcttttctactaaaggtgctacc 778  Q
    |||||||||||||  |||||||||||||||||||||||| ||||||||||    
T  27944 caaaccacctaagcctattttccatcatcttttctactataggtgctacc 27895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 695 - 815
Target Start/End: Complemental strand, 6859467 - 6859346
Alignment:
Q  695 tactacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaactttcttatta 793  Q
    ||||||| |||||| | |||||| | |||| ||||||||||||||| |  | ||||||| |||||| |  |||| |||||||||| ||||| |||   ||    
T  6859467 tactacagaatccacaagtcttctctctacgtgtccaaaccacctatgcctgttttccaccatcttcttcactataggtgctaccccaactctctgtcta 6859368  T
Q  794 atattttcatttctaatcatat 815  Q
    ||||| ||||||||||||||||    
T  6859367 atattgtcatttctaatcatat 6859346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 703 - 811
Target Start/End: Complemental strand, 14749385 - 14749276
Alignment:
Q  703 aatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaactttcttattaatattttc 801  Q
    |||||| |||||||| | |||||||||||||||| |||||| || |||| | ||  |||||||||| |||||||||  ||||| |||   |||| |||||    
T  14749385 aatccacaggtcttctctctacatgtccaaaccatctaagtctagtttctaccaatttttctactataggtgctacaccaactctctctctaatgttttc 14749286  T
Q  802 atttctaatc 811  Q
    ||||||||||    
T  14749285 atttctaatc 14749276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 682 - 768
Target Start/End: Complemental strand, 42199386 - 42199298
Alignment:
Q  682 tgatctaccctcct-actacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaa 768  Q
    |||||||| ||||| |||||| |||| | | |||||| | ||||||| ||||||||||||||| || |||||| |||||||||||||||    
T  42199386 tgatctactctccttactacagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctactaa 42199298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 744 - 810
Target Start/End: Complemental strand, 37124603 - 37124539
Alignment:
Q  744 tattttccatcatcttttctactaaaggtgctaccacaactttcttattaatattttcatttctaat 810  Q
    ||||||||||||||||||| |||| |||||||||| | ||| |||  ||||| ||||||||||||||    
T  37124603 tattttccatcatcttttcaactataggtgctaccccgactctct--ttaattttttcatttctaat 37124539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 664 - 784
Target Start/End: Complemental strand, 2713062 - 2712940
Alignment:
Q  664 atttgattatccttcatttgatctaccctcctac-tacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatctttt 761  Q
    |||||| | |||| ||| |||||||| ||||| | |||| |||||| |||||||| | ||||||| ||||||||||||||| || | || | ||||||||    
T  2713062 atttgactctcctccatctgatctactctccttcatacagaatccacaggtcttctctctacatgcccaaaccacctaagtctagtctctaccatctttt 2712963  T
Q  762 ctactaaaggtgctaccacaact 784  Q
      |||| |||||||||| |||||    
T  2712962 agactataggtgctaccccaact 2712940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 778
Target Start/End: Complemental strand, 28676666 - 28676597
Alignment:
Q  710 aggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctacc 778  Q
    |||||||| | ||||||| | ||||||||||||  ||||||||| |||||||||||||| || |||||||    
T  28676666 aggtcttctctctacatgccgaaaccacctaagactattttccaccatcttttctactatagctgctacc 28676597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 721 - 811
Target Start/End: Original strand, 54365199 - 54365287
Alignment:
Q  721 ctacatgtccaaaccacctaagttattttccatcatcttttctactaaaggtgctaccacaactttcttattaatattttcatttctaatc 811  Q
    ||||||| |||||||||||||| ||||||||  ||| |||||||||| |||||||||| ||||| |||   ||||||||||||||||||||    
T  54365199 ctacatgcccaaaccacctaagctattttccgccatattttctactataggtgctaccccaactctct--ctaatattttcatttctaatc 54365287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 679 - 784
Target Start/End: Original strand, 36820140 - 36820247
Alignment:
Q  679 atttgatctaccctcct-actacataatccataggtcttcacactacatgtccaaaccacctaag-ttattttccatcatcttttctactaaaggtgcta 776  Q
    ||||||||||||||||| ||||||||||| || ||||||| |  |||||||| ||||||||||||  || |||||| ||||||| ||| || ||||||||    
T  36820140 atttgatctaccctccttactacataatctatgggtcttctctttacatgtctaaaccacctaagcctagtttccaccatctttgctaatataggtgcta 36820239  T
Q  777 ccacaact 784  Q
    || |||||    
T  36820240 ccccaact 36820247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 707 - 784
Target Start/End: Original strand, 50960841 - 50960919
Alignment:
Q  707 cataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaact 784  Q
    ||||||||||| | ||||||| ||||||||||||||  ||||||| | |||||||||||||| |||||||||| |||||    
T  50960841 cataggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctaccccaact 50960919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 721 - 784
Target Start/End: Complemental strand, 26490375 - 26490311
Alignment:
Q  721 ctacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaact 784  Q
    ||||||||||||||||||||||  ||||||| | |||||||||||||| |||||||||| |||||    
T  26490375 ctacatgtccaaaccacctaagcctattttctaccatcttttctactataggtgctacctcaact 26490311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 671 - 776
Target Start/End: Original strand, 42510187 - 42510292
Alignment:
Q  671 tatccttcatttgatctaccctcct-actacataatccataggtcttcacactacatgtccaaaccacctaag-ttattttccatcatcttttctactaa 768  Q
    |||||| ||| |||||||| ||||| || ||| |||| |||||||||| |  |||||||||||||||||||||  |||||||||  |||||||||||||     
T  42510187 tatcctccatctgatctactctccttaccacaaaatctataggtcttctc--tacatgtccaaaccacctaagcctattttccactatcttttctactat 42510284  T
Q  769 aggtgcta 776  Q
    ||||||||    
T  42510285 aggtgcta 42510292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 725 - 784
Target Start/End: Original strand, 44134056 - 44134116
Alignment:
Q  725 atgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaact 784  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||| |||||| |||||    
T  44134056 atgtccaaaccacctaagtctattttccaccatcttttctactagaggcgctaccccaact 44134116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 788
Target Start/End: Complemental strand, 27917630 - 27917562
Alignment:
Q  721 ctacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaactttct 788  Q
    |||||||||||||||| |||||  ||||| | | |||||||||||||| |||||||||| |||||||||    
T  27917630 ctacatgtccaaaccatctaagcctatttcctaccatcttttctactataggtgctaccccaactttct 27917562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 589 - 811
Target Start/End: Original strand, 39600770 - 39600994
Alignment:
Q  589 tccaactcactaacctcttagtgattcctaatagtttctcttaaaaaatttctagttcttcatctatcttgaagaatttgattatccttcatttgatcta 688  Q
    ||||||||| |||||||| | |  ||| ||||||||||||||| |   ||||||| ||||| |||| ||     ||| ||| ||||||  || |||||||    
T  39600770 tccaactcattaacctctaaatctttcttaatagtttctcttatagtttttctaggtcttcctctacctcttgcaatctgactatcctcgatctgatcta 39600869  T
Q  689 ccctccta-ctacataatccataggtcttcacactacatgtccaaaccacctaag-ttattttccatcatcttttctactaaaggtgctaccacaacttt 786  Q
    | |||||  ||||| |||| | |||||||| |  |||||| | |||||||||||| || ||||||| |||||||||||||| |||| ||||| ||||| |    
T  39600870 ctctcctcgctacagaatctacaggtcttctctttacatgccaaaaccacctaagcttgttttccaccatcttttctactataggtactaccccaactct 39600969  T
Q  787 cttattaatattttcatttctaatc 811  Q
    ||   |||| || ||||||||||||    
T  39600970 ctctctaatgttgtcatttctaatc 39600994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 711 - 778
Target Start/End: Original strand, 49503766 - 49503834
Alignment:
Q  711 ggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctacc 778  Q
    ||||||| | ||||||| ||||||||||||||  ||||||| | |||||||||||||| ||||||||||    
T  49503766 ggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacc 49503834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 721 - 783
Target Start/End: Complemental strand, 54128438 - 54128375
Alignment:
Q  721 ctacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaac 783  Q
    ||||||| ||||||||||||||  ||||||| | |||||||||||||| |||||||||| ||||    
T  54128438 ctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctaccccaac 54128375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 671 - 778
Target Start/End: Complemental strand, 36143476 - 36143367
Alignment:
Q  671 tatccttcatttgatctaccctcc-tactacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaa 768  Q
    |||||| |||||||||||| |||| ||||||| |||| |||||||||  | ||| ||| ||||||||||||||| ||||||||| ||||| |||| |||     
T  36143476 tatcctccatttgatctactctccatactacagaatctataggtcttttctctaaatgcccaaaccacctaagtctattttccaccatctattctgctat 36143377  T
Q  769 aggtgctacc 778  Q
    ||||||||||    
T  36143376 aggtgctacc 36143367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 729 - 809
Target Start/End: Original strand, 45512725 - 45512808
Alignment:
Q  729 ccaaaccacctaag-ttattttccatcatcttttctactaaaggtgctaccacaact--ttcttattaatattttcatttctaa 809  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||||||| |||||   |||  |||||||||||||||||||    
T  45512725 ccaaaccatctaagcttattttccatcatcttttctactataggtgctaccccaactccctctctttaatattttcatttctaa 45512808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 703 - 811
Target Start/End: Original strand, 44681243 - 44681352
Alignment:
Q  703 aatccataggtcttcacactacatgtccaaaccacctaag-ttattttccatcatcttttctactaaaggtgctaccacaactttcttattaatattttc 801  Q
    |||| |||||||||| | ||| || ||||||||  ||||| |||||||||| ||||||||||| || |||||||||||||||| |||   |||| || ||    
T  44681243 aatctataggtcttctctctagatttccaaaccttctaagcttattttccaccatcttttctattataggtgctaccacaactgtctctctaatgttgtc 44681342  T
Q  802 atttctaatc 811  Q
    ||||||||||    
T  44681343 atttctaatc 44681352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 663 - 777
Target Start/End: Original strand, 43904828 - 43904947
Alignment:
Q  663 aatttgattatccttcatttgatctaccctcct-actacataatccataggtcttcacactacatgtccaaaccacctaag----ttattttccatcatc 757  Q
    ||||||| |||||| ||| |||||||  || || ||||||  ||| |||||||||| | ||||||||||||||||||||||    |||||||||  ||||    
T  43904828 aatttgactatcctccatctgatctattcttcttactacaacatctataggtcttctctctacatgtccaaaccacctaagcttattattttcctccatc 43904927  T
Q  758 ttttctactaaaggtgctac 777  Q
    |||||||||| || ||||||    
T  43904928 ttttctactatagatgctac 43904947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 679 - 811
Target Start/End: Complemental strand, 44373879 - 44373745
Alignment:
Q  679 atttgatctaccctcct-actacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgcta 776  Q
    ||||||||||| ||| | |||||| |||| ||||||||| || |||||||  ||||||||  |||  ||||||||| |||||||||||||  ||||||||    
T  44373879 atttgatctactctctttactacaaaatctataggtctttactctacatgctcaaaccactcaagcctattttccaccatcttttctactttaggtgcta 44373780  T
Q  777 ccacaactttcttattaatattttcatttctaatc 811  Q
    |  ||||| ||    ||||||||||||||||||||    
T  44373779 ctccaactctcactctaatattttcatttctaatc 44373745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 721 - 778
Target Start/End: Original strand, 18752098 - 18752155
Alignment:
Q  721 ctacatgtccaaaccacctaagttattttccatcatcttttctactaaaggtgctacc 778  Q
    |||||||||||||||| ||||| ||||||| | || ||||||||||| ||||||||||    
T  18752098 ctacatgtccaaaccatctaagctattttctaccaacttttctactataggtgctacc 18752155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 730 - 815
Target Start/End: Complemental strand, 33511407 - 33511325
Alignment:
Q  730 caaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaactttcttattaatattttcatttctaatcatat 815  Q
    |||||||||||||| |||||| |||||| |||||||| | ||||| |||| ||||| |||    |||||||||||||||||||||||    
T  33511407 caaaccacctaagtctatttttcatcattttttctaccataggtgttaccccaactctct----aatattttcatttctaatcatat 33511325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 784
Target Start/End: Original strand, 41444548 - 41444612
Alignment:
Q  721 ctacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaact 784  Q
    |||||||||||||||||||||   || |||||| |||||||||||||| |||||||||| |||||    
T  41444548 ctacatgtccaaaccacctaaacctagtttccaccatcttttctactataggtgctaccccaact 41444612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 811
Target Start/End: Original strand, 13171879 - 13171962
Alignment:
Q  729 ccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaactttcttattaatattttcatttctaatc 811  Q
    ||||||||||||||  ||||||||| |||||||||||||| ||||||| || ||||| |||   |||| || ||||||||||||    
T  13171879 ccaaaccacctaagcatattttccaccatcttttctactataggtgcttccccaactctctctctaatcttgtcatttctaatc 13171962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 766
Target Start/End: Original strand, 41971991 - 41972046
Alignment:
Q  712 gtcttcacactacatgtccaaaccacct-aagttattttccatcatcttttctact 766  Q
    |||||| | ||||||||||||||||||| || |||||||||| |||||||||||||    
T  41971991 gtcttctctctacatgtccaaaccacctaaacttattttccaccatcttttctact 41972046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 721 - 778
Target Start/End: Complemental strand, 45419297 - 45419239
Alignment:
Q  721 ctacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctacc 778  Q
    ||||||| ||||||||||||||| ||||||  | |||||||||||||| ||||||||||    
T  45419297 ctacatgcccaaaccacctaagtctattttataccatcttttctactataggtgctacc 45419239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 671 - 815
Target Start/End: Original strand, 10824335 - 10824477
Alignment:
Q  671 tatccttcatttgatctaccctcc-tactacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaa 768  Q
    |||||| |||||||||||| |||| ||||||| |||| ||  |||||  | ||| ||  ||||||||||||||  ||||||| | |||||||||||||      
T  10824335 tatcctccatttgatctactctccatactacaaaatctatgagtcttttctctaaatacccaaaccacctaagcctattttcgaccatcttttctacttt 10824434  T
Q  769 aggtgctaccacaactttcttattaatattttcatttctaatcatat 815  Q
    ||||||| || ||||| |||    |||||||| ||||||||||||||    
T  10824435 aggtgctgcctcaactctct----aatatttttatttctaatcatat 10824477  T

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Target: chr7 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 678 - 784
Target Start/End: Original strand, 48736077 - 48736185
Alignment:
Q  678 catttgatctaccctccta-ctacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgct 775  Q
    |||||||||||| |||||| |||||||||||| |||||||| | |||||||  |||||||||||||| || ||||   |||||||||||||  |||||||    
T  48736077 catttgatctactctcctaactacataatccacaggtcttcgctctacatgagcaaaccacctaagtctagtttctcccatcttttctactgtaggtgct 48736176  T
Q  776 accacaact 784  Q
    ||| |||||    
T  48736177 accccaact 48736185  T

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Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 682 - 784
Target Start/End: Original strand, 36514389 - 36514493
Alignment:
Q  682 tgatctaccctcc-tactacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctacca 779  Q
    |||||||| |||| ||||||| |||||| | ||| || | ||||||| ||||||||||||||| || |||| | |||||||||||||| ||||||||||     
T  36514389 tgatctactctccatactacagaatccacaagtcgtctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccc 36514488  T
Q  780 caact 784  Q
    |||||    
T  36514489 caact 36514493  T

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Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 698 - 778
Target Start/End: Original strand, 36101964 - 36102045
Alignment:
Q  698 tacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctacc 778  Q
    |||| |||| |||||||||| | ||||||  ||||||||||||||  ||||||||| ||||||||||| || ||||||||||    
T  36101964 tacaaaatctataggtcttctctctacatccccaaaccacctaagcctattttccaacatcttttctattataggtgctacc 36102045  T

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Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 784
Target Start/End: Original strand, 7189448 - 7189512
Alignment:
Q  721 ctacatgtccaaaccacctaag-ttattttccatcatcttttctactaaaggtgctaccacaact 784  Q
    ||||||| |||||||||||||| |||||||| | |||||||||||||| |||||| ||| |||||    
T  7189448 ctacatgcccaaaccacctaagcttattttctaccatcttttctactataggtgcgaccccaact 7189512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 695 - 778
Target Start/End: Complemental strand, 42187556 - 42187472
Alignment:
Q  695 tactacataatccataggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctacc 778  Q
    |||||||||||| | ||| |||| |  |||||| ||||||||||||||  ||||||||| ||||||||||| || ||||||||||    
T  42187556 tactacataatctacaggccttctctttacatgcccaaaccacctaagcctattttccaccatcttttctattataggtgctacc 42187472  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 721 - 778
Target Start/End: Original strand, 26742118 - 26742176
Alignment:
Q  721 ctacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctacc 778  Q
    |||||||| ||||||||||||   ||||||||| |||||||||||||| ||||||||||    
T  26742118 ctacatgttcaaaccacctaatcctattttccaccatcttttctactataggtgctacc 26742176  T

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Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 721 - 778
Target Start/End: Complemental strand, 40169709 - 40169651
Alignment:
Q  721 ctacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctacc 778  Q
    ||||||| ||||||||||||||  ||||||||| |||||||||||||| | ||||||||    
T  40169709 ctacatgcccaaaccacctaagcctattttccaccatcttttctactataagtgctacc 40169651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 723 - 784
Target Start/End: Complemental strand, 47848732 - 47848670
Alignment:
Q  723 acatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaact 784  Q
    ||||| ||||||||||||||  ||||||||| |||||||||||||| ||| |||||| |||||    
T  47848732 acatgcccaaaccacctaagcctattttccaccatcttttctactataggcgctaccccaact 47848670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 743
Target Start/End: Complemental strand, 16013371 - 16013326
Alignment:
Q  698 tacataatccataggtcttcacactacatgtccaaaccacctaagt 743  Q
    ||||||||||| |||||||| ||||||||| ||||| |||||||||    
T  16013371 tacataatccacaggtcttctcactacatgcccaaatcacctaagt 16013326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 710 - 784
Target Start/End: Original strand, 44079 - 44154
Alignment:
Q  710 aggtcttcacactacatgtccaaaccacctaagt-tattttccatcatcttttctactaaaggtgctaccacaact 784  Q
    |||||||| | ||||||| ||||||||||||||  ||||||||  |||||||||||||| |||||||||| |||||    
T  44079 aggtcttctctctacatgcccaaaccacctaagcctattttccgccatcttttctactataggtgctaccccaact 44154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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