View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2124_low_15 (Length: 209)
Name: NF2124_low_15
Description: NF2124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2124_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 29618663 - 29618845
Alignment:
| Q |
11 |
cacagaggaaagaatcacacaacctcgctcgtcgtttcaaacacatgttgcctcttatggaagaccttcgtgacctttgtcatcctgctcctcgaaaagg |
110 |
Q |
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| T |
29618663 |
cacaaaggaaagaatcacacaacctcgctcgtcgtttcaaacacatgttgcctcttatggaagaccttcgtgacctttgtcatcctgctcctcgaaaagg |
29618762 |
T |
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| Q |
111 |
cgttgtttggttgaagaacctcagagatgcgcttttcttcgctaaggaattgttgaaattgtgtagccaaggaagcaaaattc |
193 |
Q |
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| T |
29618763 |
cgttgtttggttgaagaacctcagagatgcgcttttcttcgctagggaattgttgaaattgtgtagccaaggaagcaaaattc |
29618845 |
T |
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