View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2124_low_8 (Length: 250)

Name: NF2124_low_8
Description: NF2124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2124_low_8
NF2124_low_8
[»] chr4 (18 HSPs)
chr4 (17-195)||(348576-348760)
chr4 (190-237)||(43640970-43641017)
chr4 (188-237)||(23521749-23521798)
chr4 (190-237)||(24002209-24002256)
chr4 (190-237)||(36885817-36885864)
chr4 (193-240)||(49152264-49152311)
chr4 (193-237)||(29616059-29616103)
chr4 (192-240)||(56154494-56154542)
chr4 (194-237)||(12600761-12600804)
chr4 (193-240)||(21579900-21579947)
chr4 (193-239)||(2725283-2725329)
chr4 (192-237)||(9512508-9512553)
chr4 (192-237)||(9807030-9807075)
chr4 (196-237)||(33552995-33553036)
chr4 (196-237)||(42869859-42869900)
chr4 (193-237)||(20802699-20802743)
chr4 (192-236)||(38486421-38486465)
chr4 (193-237)||(52319200-52319244)
[»] chr2 (16 HSPs)
chr2 (192-240)||(37004041-37004089)
chr2 (193-237)||(30326506-30326550)
chr2 (191-237)||(18685705-18685751)
chr2 (196-240)||(30798659-30798703)
chr2 (193-237)||(35114656-35114700)
chr2 (193-237)||(44284508-44284552)
chr2 (190-237)||(5279009-5279056)
chr2 (194-237)||(9717113-9717156)
chr2 (190-240)||(2645258-2645308)
chr2 (196-237)||(2085946-2085987)
chr2 (193-234)||(33366481-33366522)
chr2 (192-237)||(33889128-33889173)
chr2 (193-237)||(4641387-4641431)
chr2 (196-240)||(17540588-17540632)
chr2 (193-237)||(34338681-34338725)
chr2 (193-237)||(37308527-37308571)
[»] scaffold0208 (1 HSPs)
scaffold0208 (190-237)||(2519-2566)
[»] chr8 (9 HSPs)
chr8 (190-237)||(14005219-14005266)
chr8 (193-237)||(4052368-4052412)
chr8 (189-237)||(6386443-6386491)
chr8 (193-237)||(32303775-32303819)
chr8 (195-237)||(32020191-32020233)
chr8 (192-237)||(8673245-8673290)
chr8 (192-237)||(34062998-34063043)
chr8 (196-237)||(37664458-37664499)
chr8 (192-237)||(45446325-45446370)
[»] chr6 (9 HSPs)
chr6 (190-237)||(15277151-15277198)
chr6 (192-237)||(3259548-3259593)
chr6 (192-237)||(11613990-11614035)
chr6 (192-237)||(32805348-32805393)
chr6 (192-240)||(2614766-2614814)
chr6 (197-237)||(4494312-4494352)
chr6 (193-237)||(24242535-24242579)
chr6 (193-237)||(28502330-28502374)
chr6 (193-237)||(29814736-29814780)
[»] chr3 (11 HSPs)
chr3 (190-237)||(5442160-5442207)
chr3 (190-237)||(1344876-1344923)
chr3 (190-233)||(40083190-40083233)
chr3 (195-233)||(2134944-2134982)
chr3 (191-237)||(20254945-20254991)
chr3 (195-237)||(29584749-29584791)
chr3 (196-237)||(21221529-21221570)
chr3 (188-237)||(26282556-26282605)
chr3 (193-237)||(20609802-20609846)
chr3 (193-237)||(34026554-34026598)
chr3 (193-237)||(43175441-43175485)
[»] chr1 (12 HSPs)
chr1 (190-237)||(844974-845021)
chr1 (190-237)||(44738291-44738338)
chr1 (192-237)||(30105915-30105960)
chr1 (193-237)||(26118450-26118494)
chr1 (193-237)||(41972792-41972836)
chr1 (195-237)||(12890120-12890162)
chr1 (190-240)||(39281772-39281822)
chr1 (192-237)||(7183797-7183842)
chr1 (192-237)||(34663821-34663866)
chr1 (195-240)||(50540226-50540271)
chr1 (193-237)||(1351684-1351728)
chr1 (193-237)||(16386734-16386778)
[»] chr5 (8 HSPs)
chr5 (192-237)||(35701147-35701192)
chr5 (194-237)||(2351552-2351595)
chr5 (194-237)||(4818321-4818364)
chr5 (192-237)||(7208396-7208441)
chr5 (192-237)||(24181790-24181835)
chr5 (197-237)||(11963216-11963256)
chr5 (193-237)||(29241264-29241308)
chr5 (192-240)||(41790640-41790688)
[»] scaffold0014 (1 HSPs)
scaffold0014 (192-240)||(101819-101867)
[»] chr7 (9 HSPs)
chr7 (193-237)||(3922879-3922923)
chr7 (193-237)||(12982178-12982222)
chr7 (190-237)||(10932733-10932780)
chr7 (190-237)||(36769745-36769792)
chr7 (189-240)||(43189416-43189467)
chr7 (195-237)||(32873945-32873987)
chr7 (192-237)||(16962986-16963031)
chr7 (192-237)||(40753044-40753089)
chr7 (197-237)||(18470563-18470603)
[»] scaffold0098 (1 HSPs)
scaffold0098 (194-237)||(51311-51354)
[»] scaffold0003 (1 HSPs)
scaffold0003 (192-237)||(338757-338802)
[»] scaffold0054 (1 HSPs)
scaffold0054 (193-237)||(23448-23492)


Alignment Details
Target: chr4 (Bit Score: 146; Significance: 5e-77; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 348576 - 348760
Alignment:
Q  17 agttgatgaatccaattatcatacgaaaattaataggttctct------aaggtatgtgattctattcgatatgtcaataaaagaatgatttctttctat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  348576 agttgatgaatccaattatcatacgaaaattaataggttctctcttccaaaggtatgtgattctattcgatatgtcattaaaagaatgatttctttctat 348675  T
Q  111 tttccatcaaacattcttttgagatgagataaagaaatcctcaaagtggaagcagagacccggtggacattggagtcaataaggg 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  348676 tttccatcaaacattcttttgagatgagataaagaaatcctcaaagtggaagcagagacccagtggacgttggagtcattaaggg 348760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 43640970 - 43641017
Alignment:
Q  190 taagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  43640970 taagggtgtgtttggtttgcaaaacagcaagtactagacagaacagta 43641017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 23521749 - 23521798
Alignment:
Q  188 aataagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  23521749 aataagggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 23521798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 24002209 - 24002256
Alignment:
Q  190 taagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  24002209 taagggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 24002256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 36885817 - 36885864
Alignment:
Q  190 taagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||||    
T  36885817 taagggtgtgtttggtttgcaaaacagcgagtactagacagaacagta 36885864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 49152311 - 49152264
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagtataa 240  Q
    ||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  49152311 gggtgtgtttggtttgcaaaacagcaagtactggacagaacagtataa 49152264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 29616059 - 29616103
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||    
T  29616059 gggtgtgtttggtttgcaaaatagcaagtacttgacagaacagta 29616103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 56154494 - 56154542
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagtataa 240  Q
    |||||||||||||||||||||| | |||| ||| |||||||||||||||    
T  56154494 agggtgtgtttggtttgcaaaacaacaagtactggacagaacagtataa 56154542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 12600761 - 12600804
Alignment:
Q  194 ggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||    
T  12600761 ggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 12600804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 21579900 - 21579947
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagtataa 240  Q
    ||||||||||||||||||||| || ||| ||| |||||||||||||||    
T  21579900 gggtgtgtttggtttgcaaaacagtaagtactggacagaacagtataa 21579947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 2725329 - 2725283
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagtata 239  Q
    ||||||||||||||||||||| |||||| ||| ||||||||| ||||    
T  2725329 gggtgtgtttggtttgcaaaacagcaagtactggacagaacaatata 2725283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 9512553 - 9512508
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||| |||||| ||  ||||||||||||    
T  9512553 agggtgtgtttggtttgcaaaacagcaagtacgtgacagaacagta 9512508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 9807030 - 9807075
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||| || ||| ||| ||||||||||||    
T  9807030 agggtgtgtttggtttgcaaaatagtaagtactggacagaacagta 9807075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 33553036 - 33552995
Alignment:
Q  196 tgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||| |||||| ||| ||||||||||||    
T  33553036 tgtgtttggtttgcaaaacagcaagtactggacagaacagta 33552995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 42869859 - 42869900
Alignment:
Q  196 tgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||| |||||| ||| ||||||||||||    
T  42869859 tgtgtttggtttgcaaaacagcaagtactcgacagaacagta 42869900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 20802743 - 20802699
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| |||||| |||  |||||||||||    
T  20802743 gggtgtgtttggtttgcaaaacagcaagtactgaacagaacagta 20802699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 38486465 - 38486421
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagt 236  Q
    ||||||||||| |||||||||| || ||| |||||||||||||||    
T  38486465 agggtgtgtttcgtttgcaaaacagtaagtactagacagaacagt 38486421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 52319200 - 52319244
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| |||||| ||| |||| |||||||    
T  52319200 gggtgtgtttggtttgcaaaacagcaagtactggacataacagta 52319244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 37004089 - 37004041
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagtataa 240  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  37004089 agggtgtgtttggtttgcaaaacagcaagtactagacagaacagtataa 37004041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 30326550 - 30326506
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  30326550 gggtgtgtttggtttgcaaaagagcaagtactggacagaacagta 30326506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 18685705 - 18685751
Alignment:
Q  191 aagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  18685705 aagggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 18685751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 30798703 - 30798659
Alignment:
Q  196 tgtgtttggtttgcaaaagagcaaggactagacagaacagtataa 240  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||    
T  30798703 tgtgtttggtttgcaaaacagcaagtactggacagaacagtataa 30798659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 35114656 - 35114700
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||    
T  35114656 gggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 35114700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 44284508 - 44284552
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||    
T  44284508 gggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 44284552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 5279056 - 5279009
Alignment:
Q  190 taagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||||| || ||| ||| ||||||||||||    
T  5279056 taagggtgtgtttggtttgcaaaacagtaagtacttgacagaacagta 5279009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 9717113 - 9717156
Alignment:
Q  194 ggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||    
T  9717113 ggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 9717156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 2645308 - 2645258
Alignment:
Q  190 taagggtgtgtttggtttgcaaaagagcaaggactagacagaacagtataa 240  Q
    |||||||||||||||||||||||| | |||| ||| || ||||||||||||    
T  2645308 taagggtgtgtttggtttgcaaaacaacaagtacttgatagaacagtataa 2645258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 2085946 - 2085987
Alignment:
Q  196 tgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||| |||||| ||| ||||||||||||    
T  2085946 tgtgtttggtttgcaaaacagcaagtactggacagaacagta 2085987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 33366481 - 33366522
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaaca 234  Q
    ||||||||||||||||||||| |||||| ||| |||||||||    
T  33366481 gggtgtgtttggtttgcaaaacagcaagtactggacagaaca 33366522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 33889128 - 33889173
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||| || ||| ||| ||||||||||||    
T  33889128 agggtgtgtttggtttgcaaaacagtaagtactggacagaacagta 33889173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 4641387 - 4641431
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||| ||||||||| |||||| ||| ||||||||||||    
T  4641387 gggtgtgtttgctttgcaaaacagcaagtactggacagaacagta 4641431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 17540588 - 17540632
Alignment:
Q  196 tgtgtttggtttgcaaaagagcaaggactagacagaacagtataa 240  Q
    |||||||||||||||||| |||||| ||| || ||||||||||||    
T  17540588 tgtgtttggtttgcaaaacagcaagtactggatagaacagtataa 17540632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 34338681 - 34338725
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| | |||| ||| ||||||||||||    
T  34338681 gggtgtgtttggtttgcaaaacaacaagtactggacagaacagta 34338725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 37308527 - 37308571
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| | |||| ||| ||||||||||||    
T  37308527 gggtgtgtttggtttgcaaaacaacaagtactggacagaacagta 37308571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 2566 - 2519
Alignment:
Q  190 taagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  2566 taagggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 2519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 14005266 - 14005219
Alignment:
Q  190 taagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  14005266 taagggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 14005219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 4052368 - 4052412
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||    
T  4052368 gggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 4052412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 6386443 - 6386491
Alignment:
Q  189 ataagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||||||| | |||| ||| ||||||||||||    
T  6386443 ataagggtgtgtttggtttgcaaaacaacaagtactggacagaacagta 6386491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 32303819 - 32303775
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||    
T  32303819 gggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 32303775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 32020233 - 32020191
Alignment:
Q  195 gtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||    
T  32020233 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 32020191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 8673290 - 8673245
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||| |||||| ||| |||| |||||||    
T  8673290 agggtgtgtttggtttgcaaaacagcaagtactggacaaaacagta 8673245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 34062998 - 34063043
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||||  ||||| ||| ||||||||||||    
T  34062998 agggtgtgtttggtttgcaaaaccgcaagtactggacagaacagta 34063043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 37664499 - 37664458
Alignment:
Q  196 tgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||| |||||| ||| ||||||||||||    
T  37664499 tgtgtttggtttgcaaaacagcaagcactggacagaacagta 37664458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 45446325 - 45446370
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||| || ||| ||| ||||||||||||    
T  45446325 agggtgtgtttggtttgcaaaacagtaagtactggacagaacagta 45446370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 15277198 - 15277151
Alignment:
Q  190 taagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  15277198 taagggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 15277151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 3259548 - 3259593
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||    
T  3259548 agggtgtgtttggtttgcaaaacagcaaggattggacagaacagta 3259593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 11614035 - 11613990
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||| |||||| | | ||||||||||||    
T  11614035 agggtgtgtttggtttgcaaaacagcaagtattggacagaacagta 11613990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 32805348 - 32805393
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||| |||||| ||| |||| |||||||    
T  32805348 agggtgtgtttggtttgcaaaacagcaagtactggacataacagta 32805393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 2614766 - 2614814
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagtataa 240  Q
    |||||||||||||||||||||| | |||| ||| |||| ||||||||||    
T  2614766 agggtgtgtttggtttgcaaaacaacaagtactggacaaaacagtataa 2614814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 4494352 - 4494312
Alignment:
Q  197 gtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||| || ||| ||||||||||||||||    
T  4494352 gtgtttggtttgcaaaacagtaagtactagacagaacagta 4494312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 24242535 - 24242579
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||| |||||||||||||||| |||||| ||| ||||||||||||    
T  24242535 gggtatgtttggtttgcaaaacagcaagtactggacagaacagta 24242579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 28502330 - 28502374
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| || ||| ||| ||||||||||||    
T  28502330 gggtgtgtttggtttgcaaaacagtaagtactggacagaacagta 28502374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 29814736 - 29814780
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| || ||| ||| ||||||||||||    
T  29814736 gggtgtgtttggtttgcaaaacagtaagtactggacagaacagta 29814780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 5442160 - 5442207
Alignment:
Q  190 taagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  5442160 taagggtgtgtttggtttgcaaaatagcaagtactggacagaacagta 5442207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 1344923 - 1344876
Alignment:
Q  190 taagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||||| |||||| ||| |||| |||||||    
T  1344923 taagggtgtgtttggtttgcaaaatagcaagtactggacaaaacagta 1344876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 40083190 - 40083233
Alignment:
Q  190 taagggtgtgtttggtttgcaaaagagcaaggactagacagaac 233  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||    
T  40083190 taagggtgtgtttggcttgcaaaacagcaagtactagacagaac 40083233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 2134944 - 2134982
Alignment:
Q  195 gtgtgtttggtttgcaaaagagcaaggactagacagaac 233  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  2134944 gtgtgtttggtttgcaaaacagcaagtactagacagaac 2134982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 20254945 - 20254991
Alignment:
Q  191 aagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||||| |||||| ||| |||| |||||||    
T  20254945 aagggtgtgtttggtttgcaaaacagcaagtactggacataacagta 20254991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 29584749 - 29584791
Alignment:
Q  195 gtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||    
T  29584749 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 29584791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 21221570 - 21221529
Alignment:
Q  196 tgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  21221570 tgtgtttggtttgcaatacagcaagtactagacagaacagta 21221529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 26282605 - 26282556
Alignment:
Q  188 aataagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||| |||||||||||||||||||| |||||| ||| || |||||||||    
T  26282605 aataatggtgtgtttggtttgcaaaacagcaagtactggatagaacagta 26282556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 20609846 - 20609802
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| || ||| ||| ||||||||||||    
T  20609846 gggtgtgtttggtttgcaaaacagtaagtactggacagaacagta 20609802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 34026554 - 34026598
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| || ||| ||| ||||||||||||    
T  34026554 gggtgtgtttggtttgcaaaacagtaagtactggacagaacagta 34026598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 43175441 - 43175485
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| |||||| ||| |||| |||||||    
T  43175441 gggtgtgtttggtttgcaaaacagcaagtactggacaaaacagta 43175485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 845021 - 844974
Alignment:
Q  190 taagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  845021 taagggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 844974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 44738338 - 44738291
Alignment:
Q  190 taagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||||    
T  44738338 taaggatgtgtttggtttgcaaaacagcaagtactagacagaacagta 44738291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 30105960 - 30105915
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||||    
T  30105960 agggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 30105915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 26118494 - 26118450
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||    
T  26118494 gggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 26118450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 41972792 - 41972836
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||    
T  41972792 gggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 41972836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 12890120 - 12890162
Alignment:
Q  195 gtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||| || ||| ||||||||||||||||    
T  12890120 gtgtgtttggtttgcaaaatagtaagtactagacagaacagta 12890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 39281772 - 39281822
Alignment:
Q  190 taagggtgtgtttggtttgcaaaagagcaaggactagacagaacagtataa 240  Q
    |||||||||||||||||||||||| || ||| ||| ||||||| |||||||    
T  39281772 taagggtgtgtttggtttgcaaaacagtaagtactggacagaatagtataa 39281822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 7183797 - 7183842
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||| || ||| ||| ||||||||||||    
T  7183797 agggtgtgtttggtttgcaaaacagtaagtactggacagaacagta 7183842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 34663821 - 34663866
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||| || ||| ||| ||||||||||||    
T  34663821 agggtgtgtttggtttgcaaaacagtaagtactggacagaacagta 34663866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 50540226 - 50540271
Alignment:
Q  195 gtgtgtttggtttgcaaaagagcaaggactagacagaacagtataa 240  Q
    ||||||||||||||||||| || ||| ||| |||||||||||||||    
T  50540226 gtgtgtttggtttgcaaaacagtaagtacttgacagaacagtataa 50540271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 1351728 - 1351684
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| || ||| ||| ||||||||||||    
T  1351728 gggtgtgtttggtttgcaaaacagtaagtacttgacagaacagta 1351684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 16386734 - 16386778
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| |||||| | | ||||||||||||    
T  16386734 gggtgtgtttggtttgcaaaacagcaagtattggacagaacagta 16386778  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 35701147 - 35701192
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||||    
T  35701147 agggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 35701192  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 2351552 - 2351595
Alignment:
Q  194 ggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||    
T  2351552 ggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 2351595  T

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Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 4818364 - 4818321
Alignment:
Q  194 ggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||    
T  4818364 ggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 4818321  T

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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 7208441 - 7208396
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||| | |||| ||| ||||||||||||    
T  7208441 agggtgtgtttggtttgcaaaacaacaagtactggacagaacagta 7208396  T

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Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 24181835 - 24181790
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||| || ||| ||| ||||||||||||    
T  24181835 agggtgtgtttggtttgcaaaacagtaagtactggacagaacagta 24181790  T

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Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 11963216 - 11963256
Alignment:
Q  197 gtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||| |||||| ||| ||||||||||||    
T  11963216 gtgtttggtttgcaaaacagcaagtactggacagaacagta 11963256  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 29241264 - 29241308
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||| ||||||||||||| |||||| ||| ||||||||||||    
T  29241264 gggtgtgcttggtttgcaaaacagcaagtactggacagaacagta 29241308  T

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Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 41790688 - 41790640
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagtataa 240  Q
    |||||||||||||||| ||||| || ||| ||| |||||||||||||||    
T  41790688 agggtgtgtttggtttacaaaacagtaagtactggacagaacagtataa 41790640  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 101819 - 101867
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagtataa 240  Q
    |||||||||||||||||||||| |||||| ||  |||||||||||||||    
T  101819 agggtgtgtttggtttgcaaaacagcaagtaccggacagaacagtataa 101867  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 3922923 - 3922879
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||    
T  3922923 gggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 3922879  T

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Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 12982178 - 12982222
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||||||||| ||| || |||||||||    
T  12982178 gggtgtgtttggtttgcaaaagagcaagtactggagagaacagta 12982222  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 10932780 - 10932733
Alignment:
Q  190 taagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||||| || ||| ||| ||||||||||||    
T  10932780 taagggtgtgtttggtttgcaaaacagtaagtactggacagaacagta 10932733  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 36769792 - 36769745
Alignment:
Q  190 taagggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||||| || ||| ||| ||||||||||||    
T  36769792 taagggtgtgtttggtttgcaaaacagtaagtactggacagaacagta 36769745  T

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Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 43189467 - 43189416
Alignment:
Q  189 ataagggtgtgtttggtttgcaaaagagcaaggactagacagaacagtataa 240  Q
    ||||||||||||||||||||||||| || ||| ||| |||| ||||||||||    
T  43189467 ataagggtgtgtttggtttgcaaaacagtaagtactggacataacagtataa 43189416  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 32873987 - 32873945
Alignment:
Q  195 gtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||    
T  32873987 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 32873945  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 16962986 - 16963031
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||| || ||| ||| ||||||||||||    
T  16962986 agggtgtgtttggtttgcaaaacagtaagtactggacagaacagta 16963031  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 40753044 - 40753089
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||| || ||| ||| ||||||||||||    
T  40753044 agggtgtgtttggtttgcaaaacagtaagtactggacagaacagta 40753089  T

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Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 18470563 - 18470603
Alignment:
Q  197 gtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||| |||||| ||| ||||||||||||    
T  18470563 gtgtttggtttgcaaaacagcaagtactggacagaacagta 18470603  T

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Target: scaffold0098 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 51311 - 51354
Alignment:
Q  194 ggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||    
T  51311 ggtgtgtttggtttgcaaaacagcaagtactggacagaacagta 51354  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 338757 - 338802
Alignment:
Q  192 agggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    |||||||||||||||||||||| |||||| ||| |||| |||||||    
T  338757 agggtgtgtttggtttgcaaaacagcaagtactggacataacagta 338802  T

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Target: scaffold0054 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 23448 - 23492
Alignment:
Q  193 gggtgtgtttggtttgcaaaagagcaaggactagacagaacagta 237  Q
    ||||||||||||||||||||| |||||  ||| ||||||||||||    
T  23448 gggtgtgtttggtttgcaaaacagcaaatactggacagaacagta 23492  T

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