View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21250_high_10 (Length: 227)
Name: NF21250_high_10
Description: NF21250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21250_high_10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 32360803 - 32360577
Alignment:
| Q |
1 |
gtcaagctgcagcctgaagcaaggaatgatacaccaaagactgcagcttcagggaacattgagagggaatatcttgattacaatgagcctaagacgtatg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32360803 |
gtcaagctgcagcctgaagcaaggaatgatacaccaaagactgcagcttcagggaacattgagagggaatatcttgattacaatgagcctaagacgtatg |
32360704 |
T |
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| Q |
101 |
atttcgctatagtaaaatttaattactactttcattagcttcactattgaatgttgaaatatgaaatcagaattgtaatgttaaatggatgatgatgtgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32360703 |
atttcgctatagtaaaatttaattactactttcattagcttcactattgaatgttgaaatatgaaatcagaattgtaatgttaaatggatgatgatgtgt |
32360604 |
T |
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| Q |
201 |
ttttcagggttttccaagcagaggctt |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
32360603 |
ttttcagggttttccaagcagaggctt |
32360577 |
T |
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