View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21253_high_3 (Length: 341)
Name: NF21253_high_3
Description: NF21253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21253_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 17 - 328
Target Start/End: Original strand, 7367602 - 7367913
Alignment:
| Q |
17 |
atggacatcatcaatggttagttttttcctgcaaatatgtaaagaaatgaataattgagaatttgaagtgtataaataatagggtgcataatgtcaggcg |
116 |
Q |
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| T |
7367602 |
atggatatcatcaatggttagttttttcctgcaaatatgtaaagaaatgaataattgagaatttgaagtgtataaaaaatacggtgcataatgtcaggca |
7367701 |
T |
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| Q |
117 |
aagatgatggtatacttctacatcagtagttttaaattcaaagcagtttgtttcattaatagtttcattcacataaatatagtgacgcaaattatatacg |
216 |
Q |
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| T |
7367702 |
aagatgatggtatacttctacatcagtagttttaaattcaaagcagtttgtttcattaatagtttcattcacataaatatagtgacgcaaattatatacg |
7367801 |
T |
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| Q |
217 |
tggccagccaaatgaaagagggaaaggtaaaacatactttaatattttgcaataaacactatacaagctcttgtgccgcccagaaatgacatgataagaa |
316 |
Q |
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|| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7367802 |
tgaccagccaaatgaaagagggaaaggtaaaacgtactttaatattttgcaataaacactatacaagctcttgtgccgcccagaaatgacatgataagaa |
7367901 |
T |
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| Q |
317 |
atgccttcatct |
328 |
Q |
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|||||||||||| |
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| T |
7367902 |
atgccttcatct |
7367913 |
T |
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