View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21253_high_8 (Length: 305)
Name: NF21253_high_8
Description: NF21253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21253_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 56 - 277
Target Start/End: Original strand, 23523087 - 23523308
Alignment:
| Q |
56 |
ccttcttatccaacatggaacacaaactcaactaggttctataaccatccaacaacttcttcttactctcaacaacaacctatcaatggtagtcctttag |
155 |
Q |
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| T |
23523087 |
ccttcttatccaacatggaacacaaactcaactaggttctataaccatccaacaacttcttcttactctcaacaacaacctatcaatggtagtcctttag |
23523186 |
T |
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| Q |
156 |
ctttttggcgtatcccaaatggcacagttcagagtaaccctagtttcaaccatgaacgtcctttacctttgcttgcttctgaggaaagatcaaatttgtg |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23523187 |
ctttttggcgtatcccaaatggcacagttcagagtaaccctagtttcaaccatgaacgtcctttacctttgcttgcttctgaggaaagatcaaatttgtg |
23523286 |
T |
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| Q |
256 |
gcatagtggacaaggagtacct |
277 |
Q |
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|||||||||||||||||||||| |
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| T |
23523287 |
gcatagtggacaaggagtacct |
23523308 |
T |
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