View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21254_low_5 (Length: 333)

Name: NF21254_low_5
Description: NF21254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21254_low_5
NF21254_low_5
[»] chr3 (39 HSPs)
chr3 (4-322)||(11659528-11659850)
chr3 (79-269)||(16239563-16239753)
chr3 (62-267)||(12930034-12930238)
chr3 (62-210)||(33640076-33640224)
chr3 (100-242)||(54567891-54568032)
chr3 (79-212)||(4155353-4155485)
chr3 (79-242)||(20327772-20327934)
chr3 (79-212)||(45828048-45828180)
chr3 (67-163)||(22775545-22775641)
chr3 (79-186)||(35038352-35038457)
chr3 (79-233)||(13574843-13574997)
chr3 (80-160)||(31150924-31151004)
chr3 (53-173)||(39620160-39620280)
chr3 (66-173)||(34659147-34659252)
chr3 (74-186)||(49629660-49629772)
chr3 (81-173)||(15019440-15019532)
chr3 (79-203)||(20303308-20303431)
chr3 (79-242)||(1722999-1723161)
chr3 (79-212)||(31317257-31317392)
chr3 (132-212)||(45138946-45139026)
chr3 (79-159)||(46139344-46139423)
chr3 (119-269)||(54368488-54368637)
chr3 (79-160)||(21809063-21809144)
chr3 (80-120)||(21888525-21888565)
chr3 (103-242)||(11589784-11589922)
chr3 (79-122)||(20303222-20303265)
chr3 (79-137)||(19954375-19954433)
chr3 (156-242)||(35038193-35038279)
chr3 (79-140)||(34992706-34992767)
chr3 (79-140)||(39269174-39269235)
chr3 (99-183)||(35018533-35018616)
chr3 (80-152)||(53477003-53477075)
chr3 (130-180)||(1800086-1800136)
chr3 (79-137)||(37246776-37246834)
chr3 (155-212)||(24866226-24866283)
chr3 (79-128)||(27670316-27670365)
chr3 (90-211)||(28087149-28087269)
chr3 (73-118)||(52724138-52724183)
chr3 (142-186)||(17638289-17638333)
[»] chr5 (39 HSPs)
chr5 (79-242)||(41666915-41667078)
chr5 (79-269)||(24346659-24346849)
chr5 (79-269)||(24270028-24270218)
chr5 (73-248)||(15480315-15480489)
chr5 (79-181)||(95424-95525)
chr5 (79-212)||(25258224-25258356)
chr5 (79-212)||(25322014-25322146)
chr5 (79-211)||(18333622-18333753)
chr5 (79-243)||(24528538-24528701)
chr5 (79-186)||(43117702-43117808)
chr5 (79-212)||(9368624-9368756)
chr5 (79-186)||(17150391-17150497)
chr5 (62-173)||(17423775-17423886)
chr5 (79-186)||(32908875-32908981)
chr5 (79-181)||(26137267-26137369)
chr5 (79-247)||(24531593-24531760)
chr5 (79-269)||(6919352-6919539)
chr5 (79-140)||(11896314-11896375)
chr5 (79-186)||(6413580-6413686)
chr5 (79-214)||(21209844-21209978)
chr5 (132-269)||(1564542-1564679)
chr5 (79-140)||(8081272-8081333)
chr5 (79-212)||(8098346-8098478)
chr5 (156-233)||(12034698-12034775)
chr5 (105-269)||(2063683-2063845)
chr5 (78-137)||(13700747-13700806)
chr5 (79-111)||(17016033-17016065)
chr5 (141-269)||(24487629-24487757)
chr5 (141-212)||(13296702-13296772)
chr5 (79-134)||(33337396-33337451)
chr5 (79-121)||(18885346-18885388)
chr5 (156-242)||(20510641-20510727)
chr5 (156-242)||(41666756-41666842)
chr5 (155-212)||(25258092-25258149)
chr5 (155-212)||(25321882-25321939)
chr5 (79-143)||(17143225-17143289)
chr5 (220-268)||(24487558-24487606)
chr5 (91-139)||(30588994-30589041)
chr5 (113-173)||(35167586-35167646)
[»] chr2 (38 HSPs)
chr2 (79-269)||(2029741-2029930)
chr2 (57-269)||(10522991-10523201)
chr2 (79-186)||(5711597-5711704)
chr2 (79-212)||(16419296-16419428)
chr2 (80-212)||(40379368-40379499)
chr2 (79-242)||(14466333-14466495)
chr2 (80-185)||(21383593-21383698)
chr2 (79-186)||(15124706-15124812)
chr2 (80-169)||(38629913-38630002)
chr2 (79-186)||(93277-93383)
chr2 (73-186)||(24395918-24396030)
chr2 (105-269)||(14927074-14927238)
chr2 (79-181)||(40149159-40149260)
chr2 (79-160)||(34893506-34893586)
chr2 (81-181)||(13210586-13210686)
chr2 (79-186)||(16533367-16533473)
chr2 (79-242)||(17719399-17719561)
chr2 (87-186)||(93558-93656)
chr2 (142-212)||(28407778-28407848)
chr2 (79-164)||(19110319-19110404)
chr2 (98-207)||(33381132-33381241)
chr2 (80-173)||(36352083-36352175)
chr2 (79-243)||(2324238-2324401)
chr2 (120-180)||(31700936-31700995)
chr2 (73-140)||(44404078-44404146)
chr2 (79-269)||(32356358-32356544)
chr2 (80-158)||(11099526-11099604)
chr2 (79-133)||(17525257-17525311)
chr2 (79-153)||(18607167-18607240)
chr2 (156-269)||(16419474-16419587)
chr2 (87-140)||(37812434-37812487)
chr2 (80-185)||(44529763-44529867)
chr2 (81-133)||(37828782-37828834)
chr2 (225-269)||(38630049-38630093)
chr2 (88-146)||(21383457-21383515)
chr2 (79-168)||(42895320-42895409)
chr2 (79-128)||(36316208-36316257)
chr2 (156-212)||(40379208-40379264)
[»] chr6 (38 HSPs)
chr6 (79-212)||(4868735-4868868)
chr6 (79-212)||(12330102-12330234)
chr6 (79-242)||(13353200-13353362)
chr6 (79-242)||(33796325-33796487)
chr6 (79-211)||(9705050-9705182)
chr6 (79-240)||(11085582-11085741)
chr6 (79-186)||(6237630-6237736)
chr6 (79-262)||(6542866-6543048)
chr6 (79-212)||(15082065-15082199)
chr6 (79-249)||(32290720-32290889)
chr6 (63-172)||(2736308-2736417)
chr6 (79-269)||(24554089-24554277)
chr6 (79-237)||(33494543-33494700)
chr6 (93-186)||(8001486-8001579)
chr6 (79-186)||(3680067-3680173)
chr6 (79-269)||(30849325-30849514)
chr6 (73-181)||(6054229-6054336)
chr6 (79-175)||(6400778-6400872)
chr6 (80-124)||(28648872-28648916)
chr6 (62-153)||(21214838-21214929)
chr6 (96-242)||(8026388-8026533)
chr6 (79-140)||(7638771-7638832)
chr6 (144-269)||(30256785-30256909)
chr6 (79-140)||(31961043-31961104)
chr6 (79-148)||(34846924-34846993)
chr6 (156-212)||(9705283-9705339)
chr6 (220-252)||(31729466-31729498)
chr6 (154-269)||(6542706-6542820)
chr6 (79-186)||(33631728-33631834)
chr6 (156-242)||(4868576-4868662)
chr6 (79-153)||(17147818-17147891)
chr6 (79-269)||(30256550-30256738)
chr6 (99-172)||(3921627-3921699)
chr6 (156-261)||(6054383-6054488)
chr6 (141-242)||(27653216-27653317)
chr6 (126-162)||(3823380-3823416)
chr6 (79-175)||(5572539-5572634)
chr6 (158-242)||(27772713-27772797)
[»] chr4 (58 HSPs)
chr4 (79-242)||(35788658-35788821)
chr4 (79-212)||(22231231-22231363)
chr4 (79-186)||(40717364-40717470)
chr4 (79-175)||(28245684-28245779)
chr4 (79-212)||(50543488-50543622)
chr4 (79-269)||(6218176-6218365)
chr4 (80-241)||(35796901-35797061)
chr4 (79-208)||(35819051-35819179)
chr4 (79-211)||(52559597-52559730)
chr4 (79-186)||(40716543-40716650)
chr4 (79-173)||(4905659-4905752)
chr4 (62-181)||(18528357-18528481)
chr4 (88-242)||(30565965-30566119)
chr4 (80-148)||(25324193-25324261)
chr4 (79-211)||(33107900-33108032)
chr4 (79-181)||(4464355-4464457)
chr4 (79-181)||(4645702-4645803)
chr4 (67-180)||(6666546-6666658)
chr4 (67-160)||(7572618-7572710)
chr4 (79-175)||(36686064-36686159)
chr4 (91-163)||(49190114-49190185)
chr4 (84-174)||(22822417-22822507)
chr4 (79-128)||(5398633-5398682)
chr4 (88-181)||(7926388-7926480)
chr4 (73-186)||(11036663-11036775)
chr4 (101-181)||(13555422-13555501)
chr4 (155-247)||(36685873-36685965)
chr4 (73-180)||(21646419-21646524)
chr4 (79-186)||(22445507-22445613)
chr4 (87-153)||(27634247-27634312)
chr4 (125-178)||(13637452-13637505)
chr4 (80-173)||(25323957-25324049)
chr4 (84-173)||(30530090-30530178)
chr4 (84-212)||(24513287-24513414)
chr4 (105-173)||(50870647-50870715)
chr4 (106-181)||(43743049-43743123)
chr4 (79-125)||(31945037-31945083)
chr4 (79-140)||(5398368-5398429)
chr4 (190-267)||(21750075-21750152)
chr4 (156-269)||(22863446-22863559)
chr4 (80-173)||(30305342-30305435)
chr4 (96-180)||(9908771-9908854)
chr4 (79-211)||(14783110-14783241)
chr4 (80-180)||(42842166-42842266)
chr4 (225-269)||(53698999-53699043)
chr4 (138-181)||(2516021-2516064)
chr4 (156-242)||(22845446-22845532)
chr4 (96-242)||(34357970-34358115)
chr4 (79-124)||(6778601-6778646)
chr4 (141-214)||(21750261-21750334)
chr4 (156-269)||(22827510-22827623)
chr4 (143-212)||(35609697-35609766)
chr4 (156-269)||(35788866-35788979)
chr4 (155-212)||(40726750-40726807)
chr4 (142-242)||(1518163-1518263)
chr4 (158-242)||(20821972-20822056)
chr4 (158-242)||(21498794-21498878)
chr4 (113-173)||(40965133-40965193)
[»] chr7 (49 HSPs)
chr7 (79-247)||(25620130-25620297)
chr7 (79-269)||(36277149-36277338)
chr7 (98-243)||(26239857-26240002)
chr7 (79-242)||(29469604-29469766)
chr7 (79-181)||(21861354-21861455)
chr7 (79-186)||(33834246-33834352)
chr7 (79-211)||(33996237-33996365)
chr7 (79-186)||(1596648-1596754)
chr7 (79-173)||(22574669-22574762)
chr7 (79-242)||(4886328-4886490)
chr7 (91-241)||(10903085-10903234)
chr7 (79-181)||(36993231-36993332)
chr7 (79-212)||(48661478-48661610)
chr7 (80-212)||(30727278-30727410)
chr7 (80-212)||(31485583-31485714)
chr7 (98-269)||(28080637-28080806)
chr7 (79-242)||(34027392-34027554)
chr7 (79-173)||(2404331-2404424)
chr7 (79-248)||(3519962-3520131)
chr7 (96-209)||(48417454-48417567)
chr7 (101-181)||(9689045-9689124)
chr7 (79-186)||(4506987-4507093)
chr7 (79-186)||(10882162-10882268)
chr7 (79-165)||(2315184-2315269)
chr7 (99-181)||(21821866-21821947)
chr7 (79-212)||(31892180-31892313)
chr7 (79-173)||(20305358-20305455)
chr7 (159-269)||(44874348-44874458)
chr7 (141-269)||(3038068-3038196)
chr7 (79-119)||(3519883-3519923)
chr7 (79-175)||(5871878-5871974)
chr7 (82-165)||(17948310-17948393)
chr7 (79-186)||(20305586-20305692)
chr7 (155-242)||(21054951-21055038)
chr7 (106-173)||(44342878-44342945)
chr7 (79-197)||(5871734-5871852)
chr7 (80-142)||(36575095-36575157)
chr7 (79-129)||(40746190-40746240)
chr7 (155-269)||(47710415-47710529)
chr7 (155-269)||(47722071-47722185)
chr7 (220-269)||(6001498-6001547)
chr7 (141-242)||(17202178-17202279)
chr7 (97-186)||(22339543-22339632)
chr7 (79-128)||(32278994-32279043)
chr7 (142-203)||(40121909-40121970)
chr7 (158-242)||(29469839-29469923)
chr7 (79-203)||(31257190-31257313)
chr7 (158-242)||(40746497-40746581)
chr7 (156-248)||(48243060-48243152)
[»] chr1 (46 HSPs)
chr1 (79-186)||(33156788-33156895)
chr1 (79-212)||(35772058-35772190)
chr1 (79-269)||(2859550-2859739)
chr1 (79-212)||(39348275-39348407)
chr1 (79-262)||(30369814-30369996)
chr1 (79-242)||(4112929-4113091)
chr1 (79-186)||(31496294-31496400)
chr1 (79-165)||(4112698-4112783)
chr1 (80-186)||(26176963-26177068)
chr1 (43-262)||(26346855-26347073)
chr1 (83-269)||(25145647-25145832)
chr1 (79-212)||(27413376-27413508)
chr1 (82-203)||(51460368-51460488)
chr1 (80-173)||(38733219-38733307)
chr1 (79-165)||(9146786-9146872)
chr1 (79-249)||(26173379-26173548)
chr1 (79-186)||(4098326-4098432)
chr1 (79-186)||(16162988-16163094)
chr1 (79-140)||(25713258-25713319)
chr1 (80-180)||(5953660-5953760)
chr1 (119-214)||(11234243-11234338)
chr1 (98-181)||(32783223-32783305)
chr1 (79-137)||(52961450-52961508)
chr1 (113-186)||(51460007-51460079)
chr1 (79-212)||(51589835-51589967)
chr1 (80-144)||(17208650-17208714)
chr1 (156-272)||(40079121-40079237)
chr1 (79-165)||(369706-369793)
chr1 (79-186)||(12376596-12376702)
chr1 (141-211)||(17452812-17452882)
chr1 (155-269)||(25145483-25145597)
chr1 (73-203)||(38668163-38668292)
chr1 (220-269)||(7826094-7826143)
chr1 (107-212)||(12325510-12325615)
chr1 (224-269)||(26603400-26603445)
chr1 (156-269)||(42586438-42586550)
chr1 (79-211)||(3169796-3169927)
chr1 (79-119)||(7307842-7307882)
chr1 (155-214)||(25255338-25255397)
chr1 (113-247)||(8870867-8871000)
chr1 (162-248)||(11924914-11925000)
chr1 (155-269)||(25713365-25713479)
chr1 (220-269)||(17468316-17468365)
chr1 (139-180)||(36273095-36273136)
chr1 (82-186)||(9499300-9499403)
chr1 (144-212)||(40316037-40316105)
[»] scaffold0692 (1 HSPs)
scaffold0692 (79-269)||(5677-5866)
[»] chr8 (53 HSPs)
chr8 (79-209)||(20301293-20301422)
chr8 (79-209)||(21087925-21088054)
chr8 (79-214)||(31197642-31197775)
chr8 (79-242)||(39052852-39053014)
chr8 (79-212)||(8084156-8084288)
chr8 (73-186)||(41790713-41790825)
chr8 (87-269)||(24532352-24532533)
chr8 (79-212)||(5932107-5932239)
chr8 (79-243)||(11232352-11232515)
chr8 (83-212)||(37001255-37001386)
chr8 (79-212)||(3157482-3157614)
chr8 (79-210)||(12688103-12688233)
chr8 (79-160)||(18004252-18004332)
chr8 (73-186)||(28213020-28213133)
chr8 (79-140)||(35682939-35683000)
chr8 (80-202)||(26208172-26208294)
chr8 (79-173)||(36917362-36917455)
chr8 (79-212)||(37868506-37868638)
chr8 (62-262)||(4873597-4873795)
chr8 (79-186)||(15042807-15042915)
chr8 (79-181)||(12317106-12317207)
chr8 (82-175)||(422379-422471)
chr8 (80-177)||(8466647-8466744)
chr8 (79-186)||(8716169-8716276)
chr8 (79-137)||(7669522-7669580)
chr8 (79-128)||(3157167-3157216)
chr8 (96-165)||(10615470-10615538)
chr8 (79-212)||(16050058-16050190)
chr8 (89-242)||(19256753-19256905)
chr8 (79-260)||(20094718-20094897)
chr8 (120-181)||(38476098-38476159)
chr8 (113-212)||(38475776-38475875)
chr8 (120-242)||(11232158-11232279)
chr8 (156-242)||(35682780-35682866)
chr8 (79-212)||(4828097-4828229)
chr8 (79-140)||(39052695-39052756)
chr8 (138-186)||(29005919-29005967)
chr8 (82-173)||(10614865-10614955)
chr8 (156-239)||(25325648-25325731)
chr8 (79-130)||(29907869-29907920)
chr8 (79-166)||(31079498-31079584)
chr8 (114-172)||(42049644-42049702)
chr8 (158-211)||(7267466-7267519)
chr8 (141-242)||(17469817-17469918)
chr8 (62-111)||(27439463-27439512)
chr8 (79-123)||(7289358-7289402)
chr8 (73-173)||(10615699-10615798)
chr8 (144-212)||(10884094-10884161)
chr8 (158-242)||(19256587-19256671)
chr8 (79-123)||(39960074-39960118)
chr8 (156-212)||(39960221-39960277)
chr8 (190-277)||(39984777-39984865)
chr8 (156-212)||(42846604-42846660)
[»] scaffold0519 (1 HSPs)
scaffold0519 (79-243)||(1914-2077)
[»] scaffold0129 (1 HSPs)
scaffold0129 (79-211)||(14333-14464)
[»] scaffold0092 (1 HSPs)
scaffold0092 (79-203)||(5693-5816)
[»] scaffold0400 (1 HSPs)
scaffold0400 (82-212)||(3874-4003)
[»] scaffold0365 (1 HSPs)
scaffold0365 (82-212)||(4518-4647)
[»] scaffold0048 (1 HSPs)
scaffold0048 (73-186)||(81897-82008)
[»] scaffold0045 (1 HSPs)
scaffold0045 (79-173)||(41129-41222)
[»] scaffold0047 (1 HSPs)
scaffold0047 (79-212)||(12676-12808)
[»] scaffold0366 (2 HSPs)
scaffold0366 (73-140)||(14504-14572)
scaffold0366 (73-140)||(10838-10906)
[»] scaffold0459 (1 HSPs)
scaffold0459 (73-140)||(13197-13265)
[»] scaffold0005 (1 HSPs)
scaffold0005 (79-211)||(56489-56620)
[»] scaffold0729 (1 HSPs)
scaffold0729 (79-124)||(2610-2655)
[»] scaffold0481 (1 HSPs)
scaffold0481 (142-211)||(3456-3525)
[»] scaffold0003 (2 HSPs)
scaffold0003 (80-177)||(102301-102397)
scaffold0003 (80-128)||(87733-87781)
[»] scaffold0542 (1 HSPs)
scaffold0542 (199-267)||(5870-5938)


Alignment Details
Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 4 - 322
Target Start/End: Original strand, 11659528 - 11659850
Alignment:
Q  4 atccaagaaatttaaaattaaattctagttt-aaacaaatcccctcacatccaagatttgacatttggagcatggtcataaatggtgggtggtccgatag 102  Q
    |||||||||||||||||| |||||||||||| ||||| | || ||||| |||| || | |||||||||||||||| ||||||||||||||||||||||||    
T  11659528 atccaagaaatttaaaatcaaattctagttttaaacacacccgctcacgtccaggactggacatttggagcatggacataaatggtgggtggtccgatag 11659627  T
Q  103 cggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggctt 202  Q
    || |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  11659628 cgaaaacctgatagcaggttgtccaacggatcttggaggaggctctaatacgatcttagacatcgtggttgagtctaactcaactatacaaaactggctt 11659727  T
Q  203 gcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactc--taacggttttgtca-ccccaaaattgtgtcat 299  Q
    |||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||||||||||||  ||||||||||| || |||||||||||||||||    
T  11659728 gcgaggtgagaaaatcccctatttataaacacattgtcagatcatctcttattcgatgtgagactctttaacggttttgccacccccaaaattgtgtcat 11659827  T
Q  300 tttccactttacttgtgtgcttc 322  Q
    |||||||||||||||||||||||    
T  11659828 tttccactttacttgtgtgcttc 11659850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 79 - 269
Target Start/End: Complemental strand, 16239753 - 16239563
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||||||  ||||| ||||||||| ||||||||||| | |||||||||||||||||||||| |||| ||||||||||||||||||||| ||    
T  16239753 cataaatggtgggtggctcgataacggaaacctgatagcaggtggccaaacggatcttggaggaggctctgataccatcttagaaatcgtggttgggcct 16239654  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    ||| |||    ||||||| |||||| ||||||||     | |||| ||||||||| ||||||||  ||| |  ||| ||||||||||||||    
T  16239653 aacacaatcccacaaaaccggcttgtgaggtgaggtttgcccccacttataaacacattgtcaggccatgtcctatccgatgtgagactct 16239563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 62 - 267
Target Start/End: Original strand, 12930034 - 12930238
Alignment:
Q  62 gacatttggagcatggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttag 161  Q
    ||||| |||||||||| || ||||||||| ||| | |||| | ||||||| ||||||||||| |||||||||| ||||||||||| | |||| |||||||    
T  12930034 gacatctggagcatggacacaaatggtgg-tggcctgataacagaaacctgatagcaggtggcccaacggatcatggaggaggctttgataccatcttag 12930132  T
Q  162 aaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgt 261  Q
    |||| ||||||||| ||||| ||||   ||||||| |||||| || |||||||     ||||  ||| |||| |||||||| |||||| |||| ||||||    
T  12930133 aaatggtggttgggcctaacacaaccccacaaaaccggcttgtgaagtgagaattgtccccacatatgaacacattgtcaggtcatctcttatccgatgt 12930232  T
Q  262 gagact 267  Q
    ||||||    
T  12930233 gagact 12930238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 210
Target Start/End: Complemental strand, 33640224 - 33640076
Alignment:
Q  62 gacatttggagcatggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttag 161  Q
    ||||| |||||||||| ||||||||||||||||||| ||| ||||||  | ||| ||||||||||||||||| |||||||||||||| |||  |||||||    
T  33640224 gacatctggagcatggacataaatggtgggtggtccaataacggaaatatgataacaggtggtccaacggattttggaggaggctctgatatcatcttag 33640125  T
Q  162 aaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtg 210  Q
    |||| ||| ||||| ||||| |||    ||||||| |||||| ||||||    
T  33640124 aaattgtgattgggcctaacacaatcccacaaaaccggcttgtgaggtg 33640076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 100 - 242
Target Start/End: Complemental strand, 54568032 - 54567891
Alignment:
Q  100 tagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactgg 199  Q
    |||||||||||| |||||||||||  ||| ||||||||||| ||||||| |||| ||||||||||||||||||||| ||||| ||||   ||||||| ||    
T  54568032 tagcggaaacctgatagcaggtggctcaatggatcttggag-aggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgg 54567934  T
Q  200 cttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    |||| |||||||| |  || |||| ||||||||| ||||||||    
T  54567933 cttgtgaggtgaggatttcccccacttataaacacattgtcag 54567891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 212
Target Start/End: Complemental strand, 4155485 - 4155353
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||| |||| | |||||||| ||| |||| |||| ||||||||||||||||||||| ||    
T  4155485 cataaacggtgggtggcccgatagcggaaacctgatagcaggtggcccaatgaatcttgga-gagactctgataccatcttagaaatcgtggttgggcct 4155387  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||||   ||||||| |||||  ||||||||    
T  4155386 aacacaaccccacaaaaccggcttttgaggtgag 4155353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 79 - 242
Target Start/End: Original strand, 20327772 - 20327934
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| |||| |||| || || ||||| || |||| || ||||||||| |||||||| ||    
T  20327772 cataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggattttaga-gaggcactgataccatattagaaatcatggttgggcct 20327870  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    ||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| ||||||||    
T  20327871 aacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 20327934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 79 - 212
Target Start/End: Complemental strand, 45828180 - 45828048
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||||||  |||||||||||||||  ||||||||||  ||| |||||||||| |||||||| |||| ||||||||||| ||||| ||| ||    
T  45828180 cataaatggtgggtggctcgatagcggaaacctggtagcaggtggcgcaatggatcttgga-gaggctctgataccatcttagaaattgtggtagggcct 45828082  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||||   ||||||| |||||| ||||||||    
T  45828081 aacacaacctcacaaaaccggcttgtgaggtgag 45828048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 163
Target Start/End: Original strand, 22775545 - 22775641
Alignment:
Q  67 ttggagcatggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaa 163  Q
    |||| ||||||  ||||||||||||||| |||||||| ||||||||||||||||||| ||||  ||||||| |||||||||| |||| |||||||||    
T  22775545 ttggtgcatggatataaatggtgggtggcccgatagcagaaacctaatagcaggtggcccaatagatcttgaaggaggctctgataccatcttagaa 22775641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 35038352 - 35038457
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||||||||||||||| || |||||||| |||| |||||||||| ||||| || |||| ||||||||| ||||||||||| ||    
T  35038352 cataaatggtgggtgg-ccgatagcggaaacctgattgcaggtggcccaatggatcttgga-gaggcactgataccatcttagaagtcgtggttgggcct 35038449  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  35038450 aacacaac 35038457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 233
Target Start/End: Original strand, 13574843 - 13574997
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||   ||||||||||||||| ||||||||||| |||| |||||||    |||||| | |||| || |||||||| ||||||||| ||    
T  13574843 cataaatggtgggtgacacgatagcggaaacctgatagcaggtggcccaatggatcttaactgaggctttgataccatattagaaattgtggttgggcct 13574942  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaaca 233  Q
    ||| ||||   |||||||||||||| |||||||| |  || |||| |||||||||    
T  13574943 aacacaaccccacaaaactggcttgtgaggtgaggatttcccccacttataaaca 13574997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 31151004 - 31150924
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatctta 160  Q
    |||||||||| |||  |||||| |||||||||||||||| |||| |||||||||||||||||||||||| |||| ||||||    
T  31151004 ataaatggtgagtgacccgataacggaaacctaatagcaagtggcccaacggatcttggaggaggctctgataccatctta 31150924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 53 - 173
Target Start/End: Complemental strand, 39620280 - 39620160
Alignment:
Q  53 ccaagatttgacatttggagcatggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaata 152  Q
    |||||| | ||||| |||||||||  | |||||||||||||   ||||| || ||| |  ||||||||||| ||||| |||||||||||||||||| |||    
T  39620280 ccaagactagacatctggagcatgtacctaaatggtgggtgactcgataacgtaaatcggatagcaggtggcccaacagatcttggaggaggctctgata 39620181  T
Q  153 cgatcttagaaatcgtggttg 173  Q
    | |||||||||||||||||||    
T  39620180 ccatcttagaaatcgtggttg 39620160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 173
Target Start/End: Original strand, 34659147 - 34659252
Alignment:
Q  66 tttggagcatggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaat 165  Q
    ||||| ||||||  ||||||| ||||||||||||||| |||||| |||||||| ||||||||||||||||| || |||||||| |||| |||||| ||||    
T  34659147 tttggtgcatggatataaatgatgggtggtccgatagtggaaacttaatagcatgtggtccaacggatctt-gaagaggctctgataccatctta-aaat 34659244  T
Q  166 cgtggttg 173  Q
    ||| ||||    
T  34659245 cgtagttg 34659252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 186
Target Start/End: Complemental strand, 49629772 - 49629660
Alignment:
Q  74 atggtcataaatggtggg-tggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggtt 172  Q
    |||| ||||||||||||| || ||||||||| ||||||| |||||||||||||||| ||||||| || ||||||||||||| || ||| |||| ||  ||    
T  49629772 atggacataaatggtgggatgctccgatagcagaaacctgatagcaggtggtccaatggatctt-gaagaggctctaataccattttaaaaatggtaatt 49629674  T
Q  173 gggtctaactcaac 186  Q
    ||||||||| ||||    
T  49629673 gggtctaacacaac 49629660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 173
Target Start/End: Original strand, 15019440 - 15019532
Alignment:
Q  81 taaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttg 173  Q
    ||||||||||||  |||||||||| ||| || |||| |||||| |||| | |||| |||||| |||||||||| |||||||||||||||||||    
T  15019440 taaatggtgggttatccgatagcgaaaatctgatagtaggtggcccaatgaatctcggaggatgctctaataccatcttagaaatcgtggttg 15019532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 203
Target Start/End: Original strand, 20303308 - 20303431
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||| |||| |||| || || |||||||| |||| || |||||||| ||||||||  ||    
T  20303308 cataaatggtgggtggaccgatagtggaaacctgatagcaggtggcccaatggattttaga-gaggctctgataccatattagaaattgtggttggacct 20303406  T
Q  179 aactcaactatacaaaactggcttg 203  Q
    ||| ||||   ||||||| ||||||    
T  20303407 aacacaaccccacaaaaccggcttg 20303431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 242
Target Start/End: Original strand, 1722999 - 1723161
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||  |||||| |||||| ||||||||| ||| ||||||| ||||   ||| || || ||||||| |||| ||||||||||||||||||||| ||    
T  1722999 cataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaacaatcgtgaag-aggctctgataccatcttagaaatcgtggttgggcct 1723097  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    ||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| ||||||||    
T  1723098 aacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 1723161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 212
Target Start/End: Complemental strand, 31317392 - 31317257
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaat---acgatcttagaaatcgtggttggg 175  Q
    |||||||||||||||| |||||| |  |||||| |||| |||||||||||||||||||||| ||| |||| ||   || ||||||||||||||||||| |    
T  31317392 cataaatggtgggtggcccgataaca-aaacctgatagtaggtggtccaacggatcttggaagagactctgataccaccatcttagaaatcgtggttgag 31317294  T
Q  176 tctaactcaactatacaaaactggcttgcgaggtgag 212  Q
     ||||| |||    ||||||| |||||| ||||||||    
T  31317293 cctaacacaatcccacaaaaccggcttgtgaggtgag 31317257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 45138946 - 45139026
Alignment:
Q  132 atcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgag 212  Q
    |||||| |||||||||| |||| |||||||||||||||||||||||| || ||||   ||||||| |||||| ||||||||    
T  45138946 atcttgaaggaggctctgataccatcttagaaatcgtggttgggtcttacacaaccccacaaaaccggcttgtgaggtgag 45139026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 46139423 - 46139344
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatctt 159  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||  |||| |||||||||| |||| |||||||| |||||    
T  46139423 cataaatggtgggtggcccgatagcagaaacctgatagcaggtgacccaatggatcttgga-gaggatctaataccatctt 46139344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 269
Target Start/End: Complemental strand, 54368637 - 54368488
Alignment:
Q  119 ggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatc 218  Q
    ||||| |||| |||||||| || ||||||| |||| ||||||||||||||||||||||||||| ||||   | ||||| |||||| |||||||| |   |    
T  54368637 ggtggcccaatggatcttgaag-aggctctgataccatcttagaaatcgtggttgggtctaacacaaccccataaaaccggcttgtgaggtgaggattgc 54368539  T
Q  219 acccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
     |||| ||||||||| ||| ||||  |||||| |||  |||||| ||||||    
T  54368538 ccccacttataaacacattttcaggccatcttctatcggatgtgggactct 54368488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 21809063 - 21809144
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatctta 160  Q
    |||||||| ||||| |||||||||||||||||| ||||||||||  |||| |||||||| |  ||||||| |||| ||||||    
T  21809063 cataaatgatgggtagtccgatagcggaaacctgatagcaggtgacccaatggatcttgaaccaggctctgataccatctta 21809144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 21888565 - 21888525
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcagg 120  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  21888565 ataaatggtgggtggtccgatagcggaaacctgatagcagg 21888525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 11589922 - 11589784
Alignment:
Q  103 cggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggctt 202  Q
    ||||||||| ||| ||||||| |||| | ||| || || ||||||| |||| || |||||||||||||||||| ||||| ||||   ||||||| |||||    
T  11589922 cggaaacctgataacaggtggcccaaagaatcgtgaag-aggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggctt 11589824  T
Q  203 gcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    | |||||||| |   | |||| ||||||||| ||||||||    
T  11589823 gtgaggtgaggattgcccccacttataaacaaattgtcag 11589784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 20303222 - 20303265
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtg 122  Q
    |||||||||||||||| |||||||||||||||| ||||||||||    
T  20303222 cataaatggtgggtggaccgatagcggaaacctgatagcaggtg 20303265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 19954375 - 19954433
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttg 137  Q
    |||||||||||||||||| ||||||| |||||| ||||||| ||| |||| ||||||||    
T  19954375 cataaatggtgggtggtcagatagcgaaaacctgatagcagatggcccaatggatcttg 19954433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 35038193 - 35038279
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    |||||||||||||||||||| ||||| ||||   ||||||| |||||| |||||||| |  || |||| ||||||||| ||||||||    
T  35038193 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacacattgtcag 35038279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 34992767 - 34992706
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggag 140  Q
    |||||||||||||||  |||| ||||||||||| ||||||||||| |||| ||| |||||||    
T  34992767 cataaatggtgggtgacccgacagcggaaacctgatagcaggtggcccaatggaccttggag 34992706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 39269235 - 39269174
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggag 140  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||| |||| ||||| |||||    
T  39269235 cataaatggtgggtggtccgataacggccacctgatagcaggtggcccaatggatcatggag 39269174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 183
Target Start/End: Complemental strand, 35018616 - 35018533
Alignment:
Q  99 atagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactc 183  Q
    ||||||||||||| |||||| |||  |||||||||||||||  ||||||| |||  ||||||||| | ||||||||| |||||||    
T  35018616 atagcggaaaccttatagcaagtgacccaacggatcttgga-taggctctgatatcatcttagaatttgtggttgggcctaactc 35018533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 53477075 - 53477003
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaata 152  Q
    ||||||||| ||||||||||||| | ||||||  || || ||| ||||| ||||||||||||| |||||||||    
T  53477075 ataaatggttggtggtccgatagtgaaaacctggtatcaagtgatccaatggatcttggaggaagctctaata 53477003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 1800136 - 1800086
Alignment:
Q  130 ggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaa 180  Q
    |||||||| |||||||||| |||| ||||||||||| ||||||||| ||||    
T  1800136 ggatcttgaaggaggctctgataccatcttagaaattgtggttgggcctaa 1800086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 37246776 - 37246834
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttg 137  Q
    |||||||||||| ||  |||||| || ||||||||||||||||||||||| | ||||||    
T  37246776 cataaatggtggatgacccgataacgaaaacctaatagcaggtggtccaatgaatcttg 37246834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 24866283 - 24866226
Alignment:
Q  155 atcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||||||||||||||||||||| ||||| ||||   ||||||| |||||| ||||||||    
T  24866283 atcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgag 24866226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 27670316 - 27670365
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaa 128  Q
    ||||||||  ||||||||||||| ||||||||| ||| ||||||||||||    
T  27670316 cataaatgacgggtggtccgataacggaaacctgataacaggtggtccaa 27670365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 28087149 - 28087269
Alignment:
Q  90 ggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactat 189  Q
    ||||| |||||| ||||||||| ||| ||||||| |||| | ||| || || |||||||  ||| ||||||||||||||| |||||||| || |||        
T  28087149 ggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaag-aggctctggtaccatcttagaaatcgtgattgggtctgacacaatccc 28087247  T
Q  190 acaaaactggcttgcgaggtga 211  Q
    ||||||| |||||| |||||||    
T  28087248 acaaaaccggcttgtgaggtga 28087269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 52724138 - 52724183
Alignment:
Q  73 catggtcataaatggtgggtggtccgatagcggaaacctaatagca 118  Q
    ||||| |||||||||||||||| ||||||||| |||||| ||||||    
T  52724138 catggacataaatggtgggtggcccgatagcgaaaacctgatagca 52724183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 17638333 - 17638289
Alignment:
Q  142 aggctctaatacgatcttagaaatcgtggttgggtctaactcaac 186  Q
    ||||||| |||| ||||||||||||||||||||| ||||| ||||    
T  17638333 aggctcttataccatcttagaaatcgtggttgggcctaacacaac 17638289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 7e-40; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 79 - 242
Target Start/End: Original strand, 41666915 - 41667078
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||| ||    
T  41666915 cataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaatcgtggttgggcct 41667014  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    ||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| ||||||||    
T  41667015 aacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 41667078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 79 - 269
Target Start/End: Original strand, 24346659 - 24346849
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||| |||| ||||||||||||||||||| |||| |||||| |||||||||||||||||    
T  24346659 cataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatcttaaaaatcgtggttgggtct 24346758  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    ||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||| | ||||||||  ||| | |||||||||||| ||||||    
T  24346759 aacacaaccccacaaaaccggcttgtgaggtgagtattacccccacttataaatacattgtcaggccatgtcttattcgatgtgggactct 24346849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 79 - 269
Target Start/End: Original strand, 24270028 - 24270218
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||| |||| ||||||||||||||||||| |||| |||||| ||||||||||| |||||    
T  24270028 cataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatcttaaaaatcgtggtt-ggtct 24270126  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatct-tttattcgatgtgagactct 269  Q
    ||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||| | ||||||||  ||| | ||||||||||||| ||||||    
T  24270127 aacacaaccccacaaaaccggcttgtgaggtgagtattacccccacttataaatacattgtcaggccatgtctttattcgatgtgggactct 24270218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 73 - 248
Target Start/End: Complemental strand, 15480489 - 15480315
Alignment:
Q  73 catggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggtt 172  Q
    ||||| |||||||||||||||| || ||||||||||||| ||||||||||| |||| ||||||| || |||||||| |||| ||||||||||||||||||    
T  15480489 catggacataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatggatctt-gaagaggctctgataccatcttagaaatcgtggtt 15480391  T
Q  173 gggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatc 248  Q
    ||| |||||  |||   |||||||  ||||| |||||||| |   | |||| ||||||||| ||||||||| ||||    
T  15480390 gggcctaacagaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaacacattgtcagaccatc 15480315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 95424 - 95525
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||| |||| |||||||||| |||||||| |||| ||||||||||||||||||||| ||    
T  95424 cataaatggtgggtggcccgatggcggaaacctgatagcaggtggcccaatggatcttgga-gaggctctgataccatcttagaaatcgtggttgggcct 95522  T
Q  179 aac 181  Q
    |||    
T  95523 aac 95525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 25258224 - 25258356
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| |||| |||||||||| || ||||| |||| ||||||||||||||||||| || |    
T  25258224 cataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttgga-gaagctctgataccatcttagaaatcgtggttgagttt 25258322  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||||   ||||||| | |||| ||||||||    
T  25258323 aacacaaccccacaaaaccgacttgtgaggtgag 25258356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 25322014 - 25322146
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| |||| |||||||||| || ||||| |||| ||||||||||||||||||| || |    
T  25322014 cataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttgga-gaagctctgataccatcttagaaatcgtggttgagttt 25322112  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||||   ||||||| | |||| ||||||||    
T  25322113 aacacaaccccacaaaaccgacttgtgaggtgag 25322146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 79 - 211
Target Start/End: Original strand, 18333622 - 18333753
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| ||||||||| |||||| ||||||||||| || | ||||||| || |||||||| |||| ||||||||| ||||||||||| ||    
T  18333622 cataaatggtgggtggcccgatagcgaaaacctgatagcaggtggcccgatggatctt-gaagaggctctgataccatcttagaattcgtggttgggcct 18333720  T
Q  179 aactcaactatacaaaactggcttgcgaggtga 211  Q
    ||| ||||   ||||||| |||||| |||||||    
T  18333721 aacacaaccccacaaaaccggcttgtgaggtga 18333753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 79 - 243
Target Start/End: Complemental strand, 24528701 - 24528538
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||| |||||||| |||||   |||| ||||||||||||||||||| ||||| ||||| ||||||| |||| |||||||||||| |||||||| ||    
T  24528701 cataaatgttgggtggttcgataatagaaaactaatagcaggtggtccaatggatcatggag-aggctctgataccatcttagaaatcatggttgggcct 24528603  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcaga 243  Q
    ||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| |||||||||    
T  24528602 aacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcaga 24528538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 79 - 186
Target Start/End: Complemental strand, 43117808 - 43117702
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| ||||  |||||||||  ||||||| |||| |||||||||||||| |||||| ||    
T  43117808 cataaatgatgggtggtccgatagcggaaacctgatagcaggtggcccaatagatcttgga-aaggctctgatactatcttagaaatcgttgttgggcct 43117710  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  43117709 aacacaac 43117702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 79 - 212
Target Start/End: Complemental strand, 9368756 - 9368624
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||| |||| ||||||| || |||||||| |||| | |||||||||  |||||||| ||    
T  9368756 catacatggtgggtggtccaatagcggaaacctgatagcaggtggcccaatggatctt-gaagaggctctgataccaccttagaaattatggttgggcct 9368658  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||||   ||||||| |||||| ||||||||    
T  9368657 aacacaaccccacaaaaccggcttgtgaggtgag 9368624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 17150391 - 17150497
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||||||||||||||| |||| |||||| |||| ||||||| || |||||||| |||| |||||| ||||||| |||| | ||    
T  17150391 cataaatggtgggtggcccgatagcggaaacctgatagtaggtggcccaatggatctt-gaagaggctctgataccatcttaaaaatcgtagttgagcct 17150489  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  17150490 aacacaac 17150497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 17423775 - 17423886
Alignment:
Q  62 gacatttggagcatggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttag 161  Q
    ||||| ||||||||||   |||||||||||| |||||||||||||||||  |||||||||||  |||| |||||| || |||||| | |||| |||||||    
T  17423775 gacatctggagcatggatgtaaatggtgggttgtccgatagcggaaaccggatagcaggtggctcaacagatctttgaagaggctttgataccatcttag 17423874  T
Q  162 aaatcgtggttg 173  Q
    || |||||||||    
T  17423875 aagtcgtggttg 17423886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 32908875 - 32908981
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||  |||||||| ||||||| ||||||| ||| |||| ||||||| || ||||||||||||  ||||||||||| ||||||| ||||    
T  32908875 cataaatggtgggtgacccgatagcagaaacctgatagcagatggcccaatggatctt-gaagaggctctaatatcatcttagaaattgtggttgagtct 32908973  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  32908974 aacacaac 32908981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 26137267 - 26137369
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||| ||||||| ||||| | | |||||| ||||||||||| |||||  ||||||||| ||||||| |||| | ||||||||||||||||||| ||    
T  26137267 cataaatgatgggtggcccgatggtgaaaacctgatagcaggtggcccaacaaatcttggagtaggctctgataccaccttagaaatcgtggttgggcct 26137366  T
Q  179 aac 181  Q
    |||    
T  26137367 aac 26137369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 247
Target Start/End: Complemental strand, 24531760 - 24531593
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||| |||||||| ||||| | |||| || ||||||||||| |||| ||||| | ||| ||||||| |||| |||||||||||||||||||||  |    
T  24531760 cataaatgttgggtggttcgataacagaaaactgatagcaggtggcccaatggatcatagag-aggctctgataccatcttagaaatcgtggttgggcat 24531662  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcat 247  Q
    ||| ||||   ||||||  |||||| |||||||| |   | |||| ||||||||| |||||||| ||||    
T  24531661 aacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaacacattgtcaggtcat 24531593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 269
Target Start/End: Original strand, 6919352 - 6919539
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||| ||||||||| ||||||||||| ||||||| ||   ||| ||||||| || |||||| | |||| |||||| |||||||||||| | ||    
T  6919352 cataaatggtgagtggtccgaaagcggaaacctgatagcagatgactcaatggatctt-gaagaggctttgataccatcttaaaaatcgtggttgagcct 6919450  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    ||| ||||   |||||||| ||||| ||||||||||     |||| ||||||||| ||||||| |||||||  ||| | ||||||||||||    
T  6919451 aacacaacctcacaaaact-gcttgtgaggtgagaattgtccccacttataaacacattgtca-atcatctcatatcctatgtgagactct 6919539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 11896314 - 11896375
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggag 140  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||  ||| |||||||||||    
T  11896314 cataaatggtgggtggtccgatagcggaaacctgatagtaggtggcacaatggatcttggag 11896375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 6413580 - 6413686
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||||||  |||||| ||| |||| ||||||||||| |||| ||||||| || |||||| | |||| || ||||||||||| ||||||| |    
T  6413580 cataaatggtgggtggctcgatagtggatacctgatagcaggtggcccaatggatctt-gaagaggctttgataccatattagaaatcgttgttgggttt 6413678  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  6413679 aacacaac 6413686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 21209844 - 21209978
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||  |||||  |||||| ||||||||| ||| ||||||| |||| | ||| || || |||||||||||| || ||||||||||||||||||  |    
T  21209844 cataaatgacgggtgacccgataacggaaacctgataacaggtggcccaaagaatcgtgaag-aggctctaataccatattagaaatcgtggttgggctt 21209942  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaa 214  Q
    ||| ||||   ||||||| |||||| ||||||||||    
T  21209943 aacacaaccccacaaaaccggcttgtgaggtgagaa 21209978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 269
Target Start/End: Original strand, 1564542 - 1564679
Alignment:
Q  132 atcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaa 231  Q
    |||||| |||||||||| |||  ||||||||||||||||||| | ||||| ||||   ||||||||| |||| || ||||| |   | |||| ||||||     
T  1564542 atcttgtaggaggctctgatatcatcttagaaatcgtggttgagcctaacacaaccccacaaaactgtcttgtgatgtgaggattgcccccacttataat 1564641  T
Q  232 catattgtcagatcatcttttattcgatgtgagactct 269  Q
    || ||||||||| ||||| |||| ||||||| ||||||    
T  1564642 cacattgtcagaccatctcttatccgatgtgggactct 1564679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 8081272 - 8081333
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggag 140  Q
    |||||||||||||||||||||||| ||| |||| ||||||||||| ||||  ||||||||||    
T  8081272 cataaatggtgggtggtccgataggggatacctgatagcaggtggcccaatcgatcttggag 8081333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 212
Target Start/End: Complemental strand, 8098478 - 8098346
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||  |||||| |||||| ||||||||| ||| ||||||| |||| | ||| || || ||||||| |||| || ||||||||||||||||||  |    
T  8098478 cataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaag-aggctctgataccatattagaaatcgtggttgggctt 8098380  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||||   ||||||| |||||| ||||||||    
T  8098379 aacacaaccccacaaaaccggcttgtgaggtgag 8098346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 12034775 - 12034698
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaaca 233  Q
    |||||||||||||||||||| ||||| |||   ||||||||||||||| |||||||| |  || ||||||||||||||    
T  12034775 tcttagaaatcgtggttgggcctaacacaatcctacaaaactggcttgtgaggtgaggatttcccccatttataaaca 12034698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 269
Target Start/End: Original strand, 2063683 - 2063845
Alignment:
Q  105 gaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgc 204  Q
    ||||||| ||| || ||| ||||| |||||||| || ||||||| |||| ||||||||||||||||||||| ||||| ||||   ||||||| | ||||     
T  2063683 gaaacctgataacatgtgatccaatggatcttgaag-aggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgt 2063781  T
Q  205 gaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    || ||||| |   | |||| ||||||||| ||||||||| ||| || ||| ||||||| ||||||    
T  2063782 ga-gtgaggattgcccccacttataaacacattgtcagaccatgttctatccgatgtgggactct 2063845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 13700747 - 13700806
Alignment:
Q  78 tcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttg 137  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||  |||| ||||||||    
T  13700747 tcataaatggtgggtggcctgatagcggaaacctgatagcaggtgacccaatggatcttg 13700806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 17016033 - 17016065
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacct 111  Q
    |||||||||||||||||||||||||||||||||    
T  17016033 cataaatggtgggtggtccgatagcggaaacct 17016065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 269
Target Start/End: Original strand, 24487629 - 24487757
Alignment:
Q  141 gaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtc 240  Q
    |||||||| |||| || ||||||||||||||||||  |||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||||||| ||    
T  24487629 gaggctctgataccatattagaaatcgtggttgggcttaacacaacctcacaaaaccggcttgtgaggtgaggattacccccacttataaacatattttc 24487728  T
Q  241 agatcatcttttattcgatgtgagactct 269  Q
    ||| || ||  ||  ||||||||||||||    
T  24487729 agaccaactcctaaccgatgtgagactct 24487757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 13296772 - 13296702
Alignment:
Q  141 gaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgag 212  Q
    |||||||  |||| ||||||||||||||||||||| ||||| ||||   |||||||||||||| ||||||||    
T  13296772 gaggctccgataccatcttagaaatcgtggttgggcctaacacaac-ccacaaaactggcttgtgaggtgag 13296702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 33337396 - 33337451
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatc 134  Q
    |||||||||||||||| ||||| |||||||||| ||||||  |||||||| |||||    
T  33337396 cataaatggtgggtggcccgatggcggaaacctgatagcaaatggtccaatggatc 33337451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 121
Target Start/End: Complemental strand, 18885388 - 18885346
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggt 121  Q
    |||||||||||||||||||||||||| |||||| | |||||||    
T  18885388 cataaatggtgggtggtccgatagcgaaaacctgaaagcaggt 18885346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 20510641 - 20510727
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    |||||||||||||| ||||| ||||| |||||  |||||||||| ||  |||||||| |   | |||| ||||||||||||||||||    
T  20510641 tcttagaaatcgtgtttgggcctaacacaactccacaaaactggtttttgaggtgaggattgcccccacttataaacatattgtcag 20510727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 41666756 - 41666842
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    |||||||||||||||||||| ||||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| ||||||||    
T  41666756 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 41666842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 25258092 - 25258149
Alignment:
Q  155 atcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||||||||||||||||||||| ||||| ||||   ||||||| |||||| ||||||||    
T  25258092 atcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgag 25258149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 25321882 - 25321939
Alignment:
Q  155 atcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||||||||||||||||||||| ||||| ||||   ||||||| |||||| ||||||||    
T  25321882 atcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgag 25321939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 17143289 - 17143225
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggag 143  Q
    ||||||||||||||||| | ||||||||||| | |||||| || |  ||| ||||||||||||||    
T  17143289 cataaatggtgggtggttcaatagcggaaacttgatagcaagtagctcaaaggatcttggaggag 17143225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 24487558 - 24487606
Alignment:
Q  220 cccatttataaacatattgtcagatcatcttttattcgatgtgagactc 268  Q
    ||||||||||||||||||||||||||| ||  ||  |||||||||||||    
T  24487558 cccatttataaacatattgtcagatcaactcctaaccgatgtgagactc 24487606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 30588994 - 30589041
Alignment:
Q  91 gtggtccgatagcggaaacctaatagcaggtggtccaacggatcttgga 139  Q
    ||||||||||||||||||| | ||||| ||||||||||| |||||||||    
T  30588994 gtggtccgatagcggaaacttgatagc-ggtggtccaacagatcttgga 30589041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 35167586 - 35167646
Alignment:
Q  113 atagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttg 173  Q
    |||||| || ||| ||| ||||||||||||| |||| |||  |||||||||||||||||||    
T  35167586 atagcatgtagtctaacagatcttggaggagactctgatatcatcttagaaatcgtggttg 35167646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 7e-37; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 79 - 269
Target Start/End: Complemental strand, 2029930 - 2029741
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||| |||| ||||||||||||||||||||| ||    
T  2029930 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggcccaatggatcttgga-gaggctctgataccatcttagaaatcgtggttgggcct 2029832  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    ||  ||||   ||||||| |||||| |||||||| |   |  ||| ||||||||| |||||||| |||| |  ||| ||||||| ||||||    
T  2029831 aaaacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttataaacacattgtcaggtcatgtcctatccgatgtgggactct 2029741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 57 - 269
Target Start/End: Complemental strand, 10523201 - 10522991
Alignment:
Q  57 gatttgacatttggagcatggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgat 156  Q
    |||| ||||| || ||| ||| ||||||||||||||||  ||||| ||||||| | ||||||||||  ||||| ||||||||||||||  ||||||| ||    
T  10523201 gattggacatctgaagcgtggacataaatggtgggtggctcgataacggaaacttgatagcaggtgacccaacagatcttggaggagg--ctaataccat 10523104  T
Q  157 cttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtg-agaaaatcacccatttataaacatattgtcagatcatcttttatt 255  Q
     |||||||||||||||||| ||||| |||    |||||| |||||||||||||| |||   ||| ||||||||||||| |||||||||||||||||||||    
T  10523103 tttagaaatcgtggttgggcctaacacaatcccacaaaaatggcttgcgaggtgaagattgtca-ccatttataaacacattgtcagatcatcttttatt 10523005  T
Q  256 cgatgtgagactct 269  Q
    ||||| ||||||||    
T  10523004 cgatgcgagactct 10522991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 5711597 - 5711704
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||    
T  5711597 cataaatggtgggtggcccgataacggaaacctgatagcaggtggtccaacggatcttggaggaggctctgatactatcttagaaatggtggttgggcct 5711696  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  5711697 aacacaac 5711704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 79 - 212
Target Start/End: Complemental strand, 16419428 - 16419296
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||| |||| |||||||||| |||||||| |||| ||||||||||||||||||||| ||    
T  16419428 cataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatggatcttgga-gaggctctgataccatcttagaaatcgtggttgggcct 16419330  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||  ||||   ||||||| |||||| ||||||||    
T  16419329 aatacaaccccacaaaaccggcttgtgaggtgag 16419296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 80 - 212
Target Start/End: Original strand, 40379368 - 40379499
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtcta 179  Q
    ||||||||||||||| ||||||| |||||||| ||||||||||| | || ||||||||||  ||||||| |||| ||||||||||||||||||||| |||    
T  40379368 ataaatggtgggtggcccgatagaggaaacctgatagcaggtggcctaatggatcttgga-aaggctctgataccatcttagaaatcgtggttgggccta 40379466  T
Q  180 actcaactatacaaaactggcttgcgaggtgag 212  Q
    || ||||   ||||||| |||||| ||||||||    
T  40379467 acacaaccccacaaaaccggcttgtgaggtgag 40379499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 79 - 242
Target Start/End: Original strand, 14466333 - 14466495
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||||||||||||||| ||| || |||| |||| |||||||||| |||||||| |||| ||||||||||| ||||||||| ||    
T  14466333 cataaatggtgggtggcccgatagcggaaacctgataacaagtggcccaatggatcttgga-gaggctctgataccatcttagaaatggtggttgggcct 14466431  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    ||| ||||   ||||||| ||||||  ||||||| |   | |||| ||||||||| ||||||||    
T  14466432 aacacaaccccacaaaaccggcttgtaaggtgaggattgctcccacttataaacacattgtcag 14466495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 185
Target Start/End: Original strand, 21383593 - 21383698
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtcta 179  Q
    |||||| |||||||  || ||||| ||||| | ||||||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||||||| |||    
T  21383593 ataaattgtgggtgacccaatagcagaaacttgatagcaggtggcccaacagatcttggaggaggctctgataccatcttagaaatcgtggttgggccta 21383692  T
Q  180 actcaa 185  Q
    ||||||    
T  21383693 actcaa 21383698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 15124706 - 15124812
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||| ||  |||||| || |||||| |||||||||||||||| |||||||||| ||| |||| |||| ||||||||||||||||||||||||    
T  15124706 cataaatggtggatgacccgataacgaaaacctgatagcaggtggtccaatggatcttgga-gagactctgataccatcttagaaatcgtggttgggtct 15124804  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  15124805 aacacaac 15124812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 38630002 - 38629913
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtg 169  Q
    |||||||| ||||| |||||||||||||||||||||| |||||  ||| |||||||||||||||||||| |||| |||||| ||||||||    
T  38630002 ataaatggcgggtgatccgatagcggaaacctaatagaaggtgacccatcggatcttggaggaggctctgataccatcttaaaaatcgtg 38629913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 93277 - 93383
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||| |||||||||| |||||| |||||| || ||||||||||| |||| |||||||||| |||||||| |||| |||||| |||||||||||||| ||    
T  93277 cataattggtgggtggcccgataacggaaagctgatagcaggtggcccaatggatcttgga-gaggctctgataccatcttaaaaatcgtggttgggcct 93375  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  93376 aacacaac 93383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 24396030 - 24395918
Alignment:
Q  73 catggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggtt 172  Q
    ||||| |||||||||||||||||||||||| | |||| | | |||||||||||||| ||||||| || |||||||| ||||  |||||||||||||||||    
T  24396030 catggacataaatggtgggtggtccgatagtgaaaacatgagagcaggtggtccaatggatctt-gaagaggctctgataccctcttagaaatcgtggtt 24395932  T
Q  173 gggtctaactcaac 186  Q
     || ||||| ||||    
T  24395931 tggcctaacacaac 24395918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 105 - 269
Target Start/End: Complemental strand, 14927238 - 14927074
Alignment:
Q  105 gaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgc 204  Q
    ||||||| ||||||||||  |||||||||| || |||||||||| ||   ||||||||||||||||||| | ||||| |||| | ||||| ||| |||      
T  14927238 gaaacctgatagcaggtgtcccaacggatcatgaaggaggctctgatgttatcttagaaatcgtggttgagcctaacacaaccacacaaagctgacttat 14927139  T
Q  205 gaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    |||||||| |   | |||| ||||||||| |||||||| |||||| |||| ||||||| ||||||    
T  14927138 gaggtgaggattgcccccacttataaacacattgtcaggtcatctcttatccgatgtgtgactct 14927074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 40149159 - 40149260
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||| ||||||||||||||||| |||| || ||||||||||  |||| ||||||| || |||||||| |||| ||||||||||| ||||||||| ||    
T  40149159 cataaatagtgggtggtccgatagctgaaatctgatagcaggtgacccaatggatctt-gaagaggctctgataccatcttagaaattgtggttgggcct 40149257  T
Q  179 aac 181  Q
    |||    
T  40149258 aac 40149260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 34893586 - 34893506
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatctta 160  Q
    |||||||||||||||||||||||||| |||||| |||| |||||| |||| |||||||||| |||||||| |||| ||||||    
T  34893586 cataaatggtgggtggtccgatagcgaaaacctgatagtaggtggcccaatggatcttgga-gaggctctgataccatctta 34893506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 181
Target Start/End: Complemental strand, 13210686 - 13210586
Alignment:
Q  81 taaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaa 180  Q
    |||||||||||| | ||||||| ||||| || |||||| |||| |||| |||||||||||||| |||| |||| ||||||||| | ||||||||| ||||    
T  13210686 taaatggtgggttgcccgatagaggaaatctgatagcatgtggcccaatggatcttggaggagtctctgataccatcttagaatttgtggttgggcctaa 13210587  T
Q  181 c 181  Q
    |    
T  13210586 c 13210586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 186
Target Start/End: Complemental strand, 16533473 - 16533367
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| ||||||||| |||||| ||||||||| | |||| ||||||| || |||||||| |||| || |||||| |||| ||||||| |    
T  16533473 cataaatggtgggtggcccgatagcgaaaacctgatagcaggtagcccaatggatctt-gaagaggctctgataccattttagaagtcgtagttgggtgt 16533375  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  16533374 aacacaac 16533367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 242
Target Start/End: Complemental strand, 17719561 - 17719399
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||| ||| | ||||| |||||||| ||||||||||| | || |||||||||| ||| || | |||| ||||||||||| ||||||||| |     
T  17719561 cataaatggtggatggccggataggggaaacctgatagcaggtggccaaatggatcttgga-gagactttgataccatcttagaaattgtggttgggccg 17719463  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    ||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| ||||||||    
T  17719462 aacacaacccgacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 17719399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 186
Target Start/End: Original strand, 93558 - 93656
Alignment:
Q  87 gtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaac 186  Q
    |||||||| |||||| ||||||||| |||| |||||  |||| ||||||||||  ||| ||| |||| ||||||||||||||||||||| ||||| ||||    
T  93558 gtgggtggcccgataacggaaacctgatagtaggtgacccaatggatcttggaa-aggttctgataccatcttagaaatcgtggttgggcctaacacaac 93656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 28407778 - 28407848
Alignment:
Q  142 aggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||||||| |||| ||||||||||||||||||||| ||||| |||||  ||||||| |||||| ||||||||    
T  28407778 aggctctgataccatcttagaaatcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgag 28407848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 19110404 - 19110319
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaa 164  Q
    |||||||| ||  ||| ||||||||  |||||||||||||||||  |||||||||||||||| ||||| | |||| ||||||||||    
T  19110404 cataaatgatgaatggcccgatagcaaaaacctaatagcaggtgacccaacggatcttggagtaggctttgataccatcttagaaa 19110319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 33381132 - 33381241
Alignment:
Q  98 gatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaact 197  Q
    |||||| |||||||  ||||| |||| | || | |||||| ||||| ||||||||| ||||||||||||||||||||| ||||| ||||   ||||||||    
T  33381132 gatagcagaaacctgttagcatgtggcctaatgaatcttgaaggagactctaataccatcttagaaatcgtggttgggactaacacaacctcacaaaact 33381231  T
Q  198 ggcttgcgag 207  Q
      ||||||||    
T  33381232 tccttgcgag 33381241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 36352083 - 36352175
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttg 173  Q
    ||||||||||||||| |||||| ||||||||| ||| ||||||| || | ||||||| || ||| ||||||||| |||||| |||| |||||||    
T  36352083 ataaatggtgggtggcccgataacggaaacctgataacaggtggcccgatggatctt-gaagagactctaataccatcttaaaaattgtggttg 36352175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 243
Target Start/End: Complemental strand, 2324401 - 2324238
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||  |||||| |||||| ||||||||| ||| ||||||| ||||   ||| || || ||||||| |||| || ||| |||||||||||||| ||    
T  2324401 cataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaacaatcgtgaag-aggctctgataccatattaaaaatcgtggttgggcct 2324303  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcaga 243  Q
    ||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| |||||||||    
T  2324302 aacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcaga 2324238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 31700936 - 31700995
Alignment:
Q  120 gtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaa 180  Q
    |||| |||| ||||||||||| |||||||||||| ||||||||||||||||||||| ||||    
T  31700936 gtggcccaatggatcttggag-aggctctaataccatcttagaaatcgtggttgggcctaa 31700995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 44404078 - 44404146
Alignment:
Q  73 catggtcataaatggtgggtggtccgatag-cggaaacctaatagcaggtggtccaacggatcttggag 140  Q
    ||||| ||||||| |||||||  ||||||| ||||||||| |||||||||||||||| |||||||||||    
T  44404078 catggacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtccaatggatcttggag 44404146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 269
Target Start/End: Complemental strand, 32356544 - 32356358
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||| ||| | |||||||||||||||| |  |||||||| |||| | || ||| || ||||||| |||| | ||||||| |||| |||||| ||    
T  32356544 cataaatggtaggtagcccgatagcggaaacctga--gcaggtggcccaatgaatattgaag-aggctctgataccaacttagaattcgtagttgggcct 32356448  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    ||| |||||  |||||||||||||| | |||||| |   | |||| ||||||||| |||||||  ||||||  | | ||||||||||||||    
T  32356447 aacacaactccacaaaactggcttgtg-ggtgaggattgcccccacttataaacacattgtcatgtcatctcatgtccgatgtgagactct 32356358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 11099526 - 11099604
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatct 158  Q
    |||||||||||||||  |||||||||||| || ||||||| |||||||| | ||| |||||||| |||| |||| ||||    
T  11099526 ataaatggtgggtggctcgatagcggaaatctgatagcagatggtccaatgaatcatggaggagactctgataccatct 11099604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 17525257 - 17525311
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggat 133  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||| |||| ||||    
T  17525257 cataaatggtgggtggcccgatagcggatacctgatagcaggtggcccaatggat 17525311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 18607167 - 18607240
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatac 153  Q
    |||||||||||||| | |||||| ||||||||| |||||| |||| |||| |||||||||| |||||||| ||||    
T  18607167 cataaatggtgggttgcccgataacggaaacctgatagcatgtggcccaatggatcttgga-gaggctctgatac 18607240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 269
Target Start/End: Complemental strand, 16419587 - 16419474
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttatt 255  Q
    |||||||||||||||||||| ||||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| ||||||||| ||| |  |||     
T  16419587 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcagaccatgtcctatc 16419488  T
Q  256 cgatgtgagactct 269  Q
    ||||||| ||||||    
T  16419487 cgatgtgggactct 16419474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 37812434 - 37812487
Alignment:
Q  87 gtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggag 140  Q
    |||||||| |||||||| ||||||| ||||||||||| |||| |||||||||||    
T  37812434 gtgggtggcccgatagcagaaacctgatagcaggtggcccaatggatcttggag 37812487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 185
Target Start/End: Original strand, 44529763 - 44529867
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtcta 179  Q
    |||||||||||||||  |||||||| |||||||||| ||  ||||||||  ||||| ||||| ||||||||||  |||||| || | |||||| || |||    
T  44529763 ataaatggtgggtggctcgatagcg-aaacctaataacaaatggtccaaacgatctcggaggcggctctaatatcatcttaaaatttgtggttaggccta 44529861  T
Q  180 actcaa 185  Q
    ||||||    
T  44529862 actcaa 44529867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 37828782 - 37828834
Alignment:
Q  81 taaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggat 133  Q
    ||||||||||||| |||||||||| ||| ||||||||||||| ||||| ||||    
T  37828782 taaatggtgggtgatccgatagcgaaaatctaatagcaggtgatccaatggat 37828834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 38630093 - 38630049
Alignment:
Q  225 ttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    ||||||| |||||||||||||||||||||||| || |||||||||    
T  38630093 ttataaatatattgtcagatcatcttttattcaatatgagactct 38630049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 21383457 - 21383515
Alignment:
Q  88 tgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggct 146  Q
    ||||||| || ||||||||||||| ||||||||||| |  || ||||||||||||||||    
T  21383457 tgggtggcccaatagcggaaacctgatagcaggtggcctgacagatcttggaggaggct 21383515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 42895409 - 42895320
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtcc-aacggatcttggaggaggctctaatacgatcttagaaatcgt 168  Q
    |||||||||||||| | |||||||||||||| | ||| ||||||| || || ||||||| || |||||||| |||| ||| ||||||||||    
T  42895409 cataaatggtgggtcgcccgatagcggaaacttgatatcaggtggccctaatggatcttaga-gaggctctgataccatcatagaaatcgt 42895320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 36316208 - 36316257
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaa 128  Q
    |||||||||||||||| |||||| ||||||||| ||| ||||||| ||||    
T  36316208 cataaatggtgggtggcccgataacggaaacctgataacaggtggcccaa 36316257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 40379208 - 40379264
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgag 212  Q
    |||||||||||||||||||| ||||| ||||   ||||||| |||||| ||||||||    
T  40379208 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgag 40379264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 3e-36; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 4868735 - 4868868
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||||||||| ||    
T  4868735 cataaatggtgggtggcccgataacggaaacctgatagcaggtggcccagcggatcttggaggaggctctgataccatcttagaaatcgtggttgggcct 4868834  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||||   ||||||| |||||| ||||||||    
T  4868835 aacacaaccccacaaaaccggcttgtgaggtgag 4868868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 12330102 - 12330234
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||| |||| |||||||||| |||||||| |||| || |||||||||||||||||| ||    
T  12330102 cataaatggtgggtggcccgatggcggaaacctgatagcaggtggcccaatggatcttgga-gaggctctgataccatattagaaatcgtggttgggcct 12330200  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||||   ||||||| |||||| ||||||||    
T  12330201 aacacaacctcacaaaaccggcttgtgaggtgag 12330234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 79 - 242
Target Start/End: Complemental strand, 13353362 - 13353200
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||||||||||||||| ||| ||||||| |||| |||||||||| |||||||| |||| ||||||||||| ||||||||| ||    
T  13353362 cataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttgga-gaggctctgataccatcttagaaatggtggttgggcct 13353264  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    ||| ||||   ||||||| ||||||  ||||||| |   | |||| ||||||||| ||||||||    
T  13353263 aacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 13353200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 79 - 242
Target Start/End: Complemental strand, 33796487 - 33796325
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||||||||||||||| ||| ||||||| |||| |||||||||| |||||||| |||| ||||||||||| ||||||||| ||    
T  33796487 cataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttgga-gaggctctgataccatcttagaaatggtggttgggcct 33796389  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    ||| ||||   ||||||| ||||||  ||||||| |   | |||| ||||||||| ||||||||    
T  33796388 aacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 33796325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 79 - 211
Target Start/End: Complemental strand, 9705182 - 9705050
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| ||||||  |||||||| ||||||||||| |||||  ||||||||||||||||| |||| ||||||||||| ||||||||| ||    
T  9705182 cataaatggtgggtggcccgataatggaaacctgatagcaggtggcccaacaaatcttggaggaggctctgataccatcttagaaatggtggttgggcct 9705083  T
Q  179 aactcaactatacaaaactggcttgcgaggtga 211  Q
    ||| ||||   ||||||| | |||| |||||||    
T  9705082 aacacaaccccacaaaaccgacttgtgaggtga 9705050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 240
Target Start/End: Complemental strand, 11085741 - 11085582
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||| || || |||||||||||||| ||||||||||| |||||| ||||||||| ||||||||| || ||||||||||||||| ||||  ||    
T  11085741 cataaatggtggttgttc-gatagcggaaacctgatagcaggtggcccaacgtatcttggag-aggctctaaaaccatcttagaaatcgtgattggacct 11085644  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtc 240  Q
    ||| ||||   ||||||| |||||| || |||||||   | |||| ||||||||||||||||    
T  11085643 aacacaaccgcacaaaaccggcttgtgaagtgagaattgcccccacttataaacatattgtc 11085582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 6237630 - 6237736
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||||| ||||||| || ||| ||||||||| ||||||||| ||||| ||| ||||    
T  6237630 cataaatggtgggtggtccgatagcggaaacctggtagcaagtggtccaatggatctt-gaagagactctaataccatcttagaagtcgtgattgagtct 6237728  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  6237729 aacacaac 6237736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 79 - 262
Target Start/End: Original strand, 6542866 - 6543048
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||  |||||| ||||||||| |||||| |||  |||| |||||||| || ||||||| |||| ||||| ||||||||||||||||||    
T  6542866 cataaatggtgggtgacccgataacggaaacctgatagcaagtgacccaatggatcttgaag-aggctctgataccatctttgaaatcgtggttgggtct 6542964  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtg 262  Q
    ||| ||||   ||||||| |||||  |||||||  |   | |||| ||||||||| ||||||||| ||||| |||| |||||||    
T  6542965 aacacaaccccacaaaaccggcttctgaggtgatgattgcccccacttataaacacattgtcagaccatctcttatccgatgtg 6543048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 15082065 - 15082199
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtcc-aacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtc 177  Q
    |||||||||||||||| ||||||  |||||||| |||||||||||||| |||||||||| ||||||| ||| |||| || |||||||||||| ||||| |    
T  15082065 cataaatggtgggtggcccgataatggaaacctgatagcaggtggtccaaacggatcttagaggaggttctgataccatattagaaatcgtgtttgggcc 15082164  T
Q  178 taactcaactatacaaaactggcttgcgaggtgag 212  Q
    |||| |||    ||||||| |||||| ||||||||    
T  15082165 taacacaatcccacaaaaccggcttgtgaggtgag 15082199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 249
Target Start/End: Complemental strand, 32290889 - 32290720
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| ||||||||| ||| || |||| |||||| || | |||| |||||| | |||||||||| |||||||||||||| ||| || ||    
T  32290889 cataaatggtgggtggcccgatagcgaaaatctgatagtaggtggcccgatggatattggag-atgctctaataccatcttagaaatcgttgtttggcct 32290791  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatct 249  Q
    ||| ||||  ||||||| || ||||||||||| |||   | |||| ||||||||| ||| |||| ||||||    
T  32290790 aacacaaccctacaaaattgacttgcgaggtgggaattactcccacttataaacacattatcaggtcatct 32290720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 2736308 - 2736417
Alignment:
Q  63 acatttggagcatggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttaga 162  Q
    |||| |||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||| ||||  ||||||| |  ||||||| |||  || |||||    
T  2736308 acatctggagcgtggacataaatgatgggtggtccgataacggaaacctaatagcaggtggcccaatagatcttgaatcaggctctgatatcattttaga 2736407  T
Q  163 aatcgtggtt 172  Q
    ||||||||||    
T  2736408 aatcgtggtt 2736417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 269
Target Start/End: Complemental strand, 24554277 - 24554089
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||||| |||||||| ||||| ||||||||||| |||| ||||||| || ||  |||| |||| || ||||||||  |||||| | ||    
T  24554277 cataaatggtgggtggtctgatagcggtaacctgatagcaggtgg-ccaatggatctt-gaagacactctgataccatgttagaaattatggttgagact 24554180  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    ||| |||||  ||||||| |||||| |||||||  |   | |||| ||||||| ||||||||||| |||||  ||| ||||||| ||||||    
T  24554179 aacacaactccacaaaaccggcttgtgaggtgaagattgcccccacttataaatatattgtcagaccatctcctatccgatgtgggactct 24554089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 33494700 - 33494543
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||| ||||||||| ||||||| |||||||| ||||||||||  |||| |||||| | || ||| ||| |||| ||||||||||| ||||||||| ||    
T  33494700 cataaacggtgggtggcccgatagtggaaacctgatagcaggtgacccaatggatctcgaag-aggttctgataccatcttagaaatggtggttgggcct 33494602  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatatt 237  Q
    ||| ||||   ||||||| |||||| |||||||| |   | |||| |||||||||||||    
T  33494601 aacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacatatt 33494543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 186
Target Start/End: Original strand, 8001486 - 8001579
Alignment:
Q  93 ggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaac 186  Q
    ||||| ||| ||||||||| ||||||||||| ||||||||||||  ||||| |||| |||| ||||||||||| ||||||||| ||||| ||||    
T  8001486 ggtccaatatcggaaacctgatagcaggtggcccaacggatctttaaggagactctgataccatcttagaaattgtggttgggcctaacacaac 8001579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 186
Target Start/End: Complemental strand, 3680173 - 3680067
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||| ||  |||||||||||||||||||||||||||  || | |||| ||||| |||| ||| |||| ||||||||||| ||||||||| ||    
T  3680173 cataaatggtggatgacccgatagcggaaacctaatagcaggtgacccgatggattttgga-gagggtctgataccatcttagaaattgtggttgggcct 3680075  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  3680074 aacacaac 3680067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 269
Target Start/End: Original strand, 30849325 - 30849514
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||| ||||  |  ||||||||||||||||||||||||||||| |||||||  ||| | || | |||  ||||||||||||||  || |||||    
T  30849325 cataaatggtgagtggctcattagcggaaacctaatagcaggtggtccaatggatcttaaagg-gactttgatatcatcttagaaatcgtaattaggtct 30849423  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    | | ||||   ||||||| ||||||||| ||||| |   | |||| |||||| || |||| || |||||||  ||| ||||||||||||||    
T  30849424 agcacaaccccacaaaaccggcttgcgatgtgaggattgctcccacttataagcacattgccatatcatctcatatccgatgtgagactct 30849514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 6054336 - 6054229
Alignment:
Q  73 catggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggtt 172  Q
    ||||| |||||| ||| |||| ||| ||||||||||||| ||||||||||| | || | ||||| || |||| ||| |||  ||||||||||||||||||    
T  6054336 catggacataaacggtcggtgatccaatagcggaaacctgatagcaggtggcctaatgaatctt-gaagaggttctgatatcatcttagaaatcgtggtt 6054238  T
Q  173 gggtctaac 181  Q
    | |||||||    
T  6054237 gagtctaac 6054229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 6400778 - 6400872
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttggg 175  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| | || |  ||| ||||| |||||| | |||| |||||| ||||||||||||||    
T  6400778 cataaatggtgggtggtccgatagcagaaacctgatagcaggt-gacccatagattttgga-gaggctttgataccatcttaaaaatcgtggttggg 6400872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 28648872 - 28648916
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggt 124  Q
    ||||||||||||| | |||||||||||||||||||||||||||||    
T  28648872 ataaatggtgggtagcccgatagcggaaacctaatagcaggtggt 28648916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 21214929 - 21214838
Alignment:
Q  62 gacatttggagcatggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatac 153  Q
    ||||| |||| || || ||||||||||  |||||||||||  |||||||| |||||| ||   ||||| |||||||||||||||||||||||    
T  21214929 gacatctggaacaaggacataaatggtaagtggtccgataatggaaacctgatagcatgtaacccaacagatcttggaggaggctctaatac 21214838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 242
Target Start/End: Complemental strand, 8026533 - 8026388
Alignment:
Q  96 ccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaa 195  Q
    |||||| || |||||| ||| ||||||| |||||  ||| || || ||||||| |||| || |||||||||||||||||| ||||| ||||   ||||||    
T  8026533 ccgataacgaaaacctgataacaggtggcccaacaaatcgtgaag-aggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 8026435  T
Q  196 ctggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    | |||||| |||||||| |   | |||| ||||||||| ||||||||    
T  8026434 ccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 8026388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 7638771 - 7638832
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggag 140  Q
    |||||||| |||||| || |||||||||||||| |||||||||| |||||  ||||||||||    
T  7638771 cataaatgatgggtgatctgatagcggaaacctgatagcaggtgatccaatagatcttggag 7638832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 269
Target Start/End: Complemental strand, 30256909 - 30256785
Alignment:
Q  144 gctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcaga 243  Q
    ||||| |||| || |||||||||||||||||| ||||| ||||   ||||||| |||||| ||||||||  | |  |||| ||||||||||||||||||     
T  30256909 gctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgag-gattgccccacttataaacatattgtcagg 30256811  T
Q  244 tcatcttttattcgatgtgagactct 269  Q
    |||||   ||| ||||||| ||||||    
T  30256810 tcatcacctatccgatgtgggactct 30256785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 31961104 - 31961043
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggag 140  Q
    ||||||||||||| ||  ||||||| ||||||| ||||||||||| |||| |||||||||||    
T  31961104 cataaatggtggggggcacgatagcagaaacctgatagcaggtggcccaatggatcttggag 31961043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 34846924 - 34846993
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctct 148  Q
    ||||||||||||| |||| |||||| |||||||||||| |||||| ||| || || ||| ||||||||||    
T  34846924 cataaatggtgggcggtctgatagcagaaacctaatagtaggtggcccagcgaattttgaaggaggctct 34846993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 9705339 - 9705283
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgag 212  Q
    |||||||||||||||||||||||||| ||||   ||||||| |||||| ||||||||    
T  9705339 tcttagaaatcgtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgag 9705283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 31729466 - 31729498
Alignment:
Q  220 cccatttataaacatattgtcagatcatctttt 252  Q
    |||||||||||||||||||||||||||||||||    
T  31729466 cccatttataaacatattgtcagatcatctttt 31729498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 269
Target Start/End: Original strand, 6542706 - 6542820
Alignment:
Q  154 gatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatctttta 253  Q
    |||||||||||||||||||||   |||| ||||  |||||||| || ||| |||||||  |   | |||||||||||||| ||||||||| |||||  ||    
T  6542706 gatcttagaaatcgtggttggacttaacacaaccctacaaaaccggtttgtgaggtgatgattgc-cccatttataaacagattgtcagaccatctccta 6542804  T
Q  254 ttcgatgtgagactct 269  Q
    | ||||||||||||||    
T  6542805 tccgatgtgagactct 6542820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 33631728 - 33631834
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||  |||||||| ||||||| ||| ||||||  ||||  ||||||||| || ||||| |||  |||||| ||||| |||||||  ||    
T  33631728 cataaatggtgggtgtcccgatagcagaaacctgatatcaggtgacccaatagatcttgga-gatgctctgatatcatcttaaaaatcatggttggacct 33631826  T
Q  179 aactcaac 186  Q
    ||||||||    
T  33631827 aactcaac 33631834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 4868576 - 4868662
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    |||||||||||||||||||| ||||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| ||||||||    
T  4868576 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 4868662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 17147818 - 17147891
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatac 153  Q
    |||||||||||||||  | |||||||||||||| ||||||||||  |||| |||| ||||| |||||||| ||||    
T  17147818 cataaatggtgggtgacctgatagcggaaacctgatagcaggtgacccaatggatgttgga-gaggctctgatac 17147891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 269
Target Start/End: Complemental strand, 30256738 - 30256550
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||| ||||||  ||||| || |||||| |||||| | || |||| |||| |||||  ||||||| |||| | ||||||||||||||||||| ||    
T  30256738 cataaatgg-gggtggctcgatatcgaaaacctgatagcatgcggcccaatggattttggaa-aggctctgataccaccttagaaatcgtggttgggcct 30256641  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    ||| ||||   ||||||| || ||| ||| |||| |   | |||| ||||||||| ||||||| | ||| | || | ||||||||||||||    
T  30256640 aacacaaccccacaaaaccggtttgtgagttgaggattgcccccagttataaacacattgtcaaaccatgtattgtccgatgtgagactct 30256550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 3921699 - 3921627
Alignment:
Q  99 atagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggtt 172  Q
    ||||||||||| | |||||||||| ||||| ||||||| || |||||||| |||| || ||||||||| |||||    
T  3921699 atagcggaaacttgatagcaggtgatccaatggatctt-gaagaggctctgataccatattagaaatcatggtt 3921627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 6054488 - 6054383
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttatt 255  Q
    |||||||||||||||||||||||||| ||||  |||||||  || ||| |||||||| |   | |||| ||||||| |  |||||||| ||||| ||||     
T  6054488 tcttagaaatcgtggttgggtctaacacaaccctacaaaatcggtttgtgaggtgaggattgcccccacttataaataccttgtcagaccatctcttatc 6054389  T
Q  256 cgatgt 261  Q
    ||||||    
T  6054388 cgatgt 6054383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 27653317 - 27653216
Alignment:
Q  141 gaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtc 240  Q
    |||||||| |||| || |||||||||||||||||| ||||| |||    ||||||| | |||| |||||||| |  || |||| ||||||||| ||||||    
T  27653317 gaggctctgataccatattagaaatcgtggttgggcctaacacaatcccacaaaaccgacttgtgaggtgaggatttcccccacttataaacaaattgtc 27653218  T
Q  241 ag 242  Q
    ||    
T  27653217 ag 27653216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 3823416 - 3823380
Alignment:
Q  126 caacggatcttggaggaggctctaatacgatcttaga 162  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  3823416 caacggatcttggaggaggctctgataccatcttaga 3823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 5572539 - 5572634
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttggg 175  Q
    ||||||||  |||||| |||||| ||||||||| ||| |||| || |||| | ||| || || ||||||| |||| || ||||||||||||||||||    
T  5572539 cataaatgacgggtggcccgataacggaaacctgataacaggcggcccaaagaatcgtgaag-aggctctgataccatattagaaatcgtggttggg 5572634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 27772797 - 27772713
Alignment:
Q  158 ttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    |||||||||||||||||  ||||| |||||  ||||||| |||||| |||||||| |   | |||| ||||||||| ||||||||    
T  27772797 ttagaaatcgtggttggacctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 27772713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 4e-35; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 79 - 242
Target Start/End: Complemental strand, 35788821 - 35788658
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| | |||| ||||||||| ||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||| ||    
T  35788821 cataaatggtgggtggcctgataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaatcgtggttgggcct 35788722  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    ||| ||||   | ||||| |||||| |||||||| |   | |||| ||||||||| ||||||||    
T  35788721 aacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 35788658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 22231231 - 22231363
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||| ||||| |||||||||||||||| ||||||||||| |||| |||| ||||| |||||||| |||| ||||||||||||||||||||| ||    
T  22231231 cataaatggtaggtggcccgatagcggaaacctgatagcaggtggcccaatggattttgga-gaggctctgataccatcttagaaatcgtggttgggcct 22231329  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||||   ||||||| |||||| ||||||||    
T  22231330 aacacaaccccacaaaaccggcttgtgaggtgag 22231363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 40717364 - 40717470
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||||||||||||||||||||||| || |||||||| |||| |||| ||||| |||||||| |||| ||||||||||||||||||||| ||    
T  40717364 cataaatggtgggtggtccgatagcggaaacctgatggcaggtggcccaatggatattgga-gaggctctgataccatcttagaaatcgtggttgggcct 40717462  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  40717463 aacacaac 40717470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 28245684 - 28245779
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttggg 175  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| |||| |||||||||| |||||||| |||| || ||||||||||||||||||    
T  28245684 cataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttgga-gaggctctgataccatattagaaatcgtggttggg 28245779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 50543488 - 50543622
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaac--ggatcttggaggaggctctaatacgatcttagaaatcgtggttgggt 176  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||| ||   ||||||||||| ||||||| |||  |||||||||||||||||||||     
T  50543488 cataaatggtgggtggcccgataacggaaacctgatagcaggtggtcaaatatggatcttggag-aggctctgatatcatcttagaaatcgtggttgggc 50543586  T
Q  177 ctaactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||||| |||||  ||||||| |||||| ||||||||    
T  50543587 ctaacacaactccacaaaaccggcttgtgaggtgag 50543622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 79 - 269
Target Start/End: Complemental strand, 6218365 - 6218176
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||| ||||||  | |||||||||||||| |||| ||||| ||||| ||||||||||| ||||||| |||| ||||||||||||||||||| ||||    
T  6218365 cataaatgatgggtgacctgatagcggaaacctgatagtaggtgatccaatggatcttggag-aggctctgataccatcttagaaatcgtggttgtgtct 6218267  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    ||| |||||  ||||||| | |||| |||||||  |   | |||| ||||||||||||||| |   |||||  ||| ||||||||||||||    
T  6218266 aacacaactccacaaaaccgtcttgtgaggtgaagattgcccccacttataaacatattgtgaagccatctcctatccgatgtgagactct 6218176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 241
Target Start/End: Original strand, 35796901 - 35797061
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtcta 179  Q
    ||||||||||||||| |||||||||||||||| ||||||||| |||||| ||||| | || |||||||| |||| ||||||||||| || ||||||  ||    
T  35796901 ataaatggtgggtggcccgatagcggaaacctgatagcaggtagtccaatggatc-tcgaagaggctctgataccatcttagaaatggtagttgggctta 35796999  T
Q  180 actcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtca 241  Q
    || ||||   |||||||||| ||| |||||||| |   | |||| |||||||||||||||||    
T  35797000 acacaaccccacaaaactggtttgtgaggtgaggattgcccccacttataaacatattgtca 35797061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 35819051 - 35819179
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||  |||||||||||||||| ||||||||||| |||| ||||||| || ||| |||| || | |||||| |||||||||||||| ||    
T  35819051 cataaatggtgggtgacccgatagcggaaacctgatagcaggtggcccaatggatcttaga-gagactctgatgccatcttaaaaatcgtggttgggcct 35819149  T
Q  179 aactcaactatacaaaactggcttgcgagg 208  Q
    ||| ||||   |||||||||||||| ||||    
T  35819150 aacacaacctcacaaaactggcttgtgagg 35819179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 79 - 211
Target Start/End: Complemental strand, 52559730 - 52559597
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaa-cggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtc 177  Q
    |||||||||||||||| |||||| |  |||| | ||||||||||| |||| |||||||| ||||||||||| |||| |||||||||||| |||||||| |    
T  52559730 cataaatggtgggtggcccgataacataaacttgatagcaggtggcccaaacggatctttgaggaggctctgatactatcttagaaatcatggttgggcc 52559631  T
Q  178 taactcaactatacaaaactggcttgcgaggtga 211  Q
    |||| ||||   ||||||| |||||| |||||||    
T  52559630 taacacaaccccacaaaaccggcttgtgaggtga 52559597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 40716543 - 40716650
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||  |||||| |||||| ||||||||| ||||||||||| |||||||||| |||| |||||||| |||| |||||||||| | |||||||| ||    
T  40716543 cataaatgacgggtggcccgataacggaaacctgatagcaggtggcccaacggatcgtggatgaggctctgataccatcttagaaaccatggttgggcct 40716642  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  40716643 aacacaac 40716650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 4905659 - 4905752
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttg 173  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| |||| ||| |||||| |||||||| |||  |||||||||||| ||||||    
T  4905659 cataaatggtgggtggcccgatagcagaaacctaatagcaggtggcccaatggagcttgga-gaggctctgatatcatcttagaaatcatggttg 4905752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 18528357 - 18528481
Alignment:
Q  62 gacatttggagcatggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttgg------aggaggctctaatacga 155  Q
    |||||||| ||||||   ||||||||||||||| |||||||||||| ||| ||| ||||||| ||||| ||||||||      |||||||||| |||| |    
T  18528357 gacatttgaagcatgactataaatggtgggtgg-ccgatagcggaagcctgataacaggtggcccaacagatcttggtcttgaaggaggctctgatacca 18528455  T
Q  156 tcttagaaatcgtggttgggtctaac 181  Q
    ||||||||||||||||||||||||||    
T  18528456 tcttagaaatcgtggttgggtctaac 18528481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 30565965 - 30566119
Alignment:
Q  88 tgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaact 187  Q
    ||||||| |||||||| ||||| | |||||| ||||||||| ||||||| ||||||||||| |||| |||| ||||| ||||||||||  |||| |||      
T  30565965 tgggtggcccgatagccgaaacttgatagcaagtggtccaatggatcttagaggaggctctcataccatctaagaaaacgtggttgggcttaacacaaac 30566064  T
Q  188 atacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
     ||||||||||||||  || |||||||   | |||| ||||||||| ||||||||    
T  30566065 ctacaaaactggcttatgatgtgagaattgctcccacttataaacacattgtcag 30566119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 25324193 - 25324261
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctct 148  Q
    ||||||||||||||| |||||||||||||| | ||||||||||| |||| |||||||||||||||||||    
T  25324193 ataaatggtgggtggcccgatagcggaaacttgatagcaggtggcccaatggatcttggaggaggctct 25324261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 211
Target Start/End: Complemental strand, 33108032 - 33107900
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| |||| | || ||| |||| ||| | |||| || ||| ||||||||||||||| |    
T  33108032 cataaatggtgggtggtccgataacggaaaccttatagcaggtggcccaatgaattttgaaggaagctttgataccatattaaaaatcgtggttgggttt 33107933  T
Q  179 aactcaactatacaaaactggcttgcgaggtga 211  Q
    |||  ||   ||||||||| ||||| |||||||    
T  33107932 aacataatcctacaaaacttgcttgtgaggtga 33107900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 4464457 - 4464355
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||| ||||||||||   ||||| ||||||||| |||||| |||  |||| |||||||| |||||||||| |||| ||||||||| ||||||||||||||    
T  4464457 catatatggtgggtgactcgataacggaaacctgatagcatgtgacccaatggatcttgaaggaggctctgataccatcttagaattcgtggttgggtct 4464358  T
Q  179 aac 181  Q
    |||    
T  4464357 aac 4464355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 4645803 - 4645702
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||  |||| ||||||| || |||||||| |||| |||||| ||||| |||||| ||||    
T  4645803 cataattggtgggtggcccgatagcggaaacctgatagcaggtgacccaatggatctttga-gaggctctgatactatcttataaatcatggttgagtct 4645705  T
Q  179 aac 181  Q
    |||    
T  4645704 aac 4645702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 6666546 - 6666658
Alignment:
Q  67 ttggagcatggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatc 166  Q
    |||| ||||||  ||||||||||||||  |||||||  ||| ||| ||||||||||| ||||| ||||||| || ||| |||||||| ||||||||||||    
T  6666546 ttggtgcatggatataaatggtgggtgacccgatagaagaatccttatagcaggtggcccaacagatcttgtag-aggttctaataccatcttagaaatc 6666644  T
Q  167 gtggttgggtctaa 180  Q
    ||||||||| ||||    
T  6666645 gtggttgggcctaa 6666658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 160
Target Start/End: Original strand, 7572618 - 7572710
Alignment:
Q  67 ttggagcatggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatctta 160  Q
    |||| ||||||  ||||||||||||||| || ||||||||||||| |||| |||||||||||| |||||||| ||||||||| |||| ||||||    
T  7572618 ttggtgcatggatataaatggtgggtggcccaatagcggaaacctgatagaaggtggtccaac-gatcttggtggaggctctgataccatctta 7572710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 36686064 - 36686159
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttggg 175  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| |||  | ||||| || |||||||| |||| |||||| ||||| ||||||||    
T  36686064 cataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccattgaatctt-gaagaggctcttatactatcttaaaaatcatggttggg 36686159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 49190114 - 49190185
Alignment:
Q  91 gtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaa 163  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||  ||||||| |||| |||||||||    
T  49190114 gtggttcgatagcggaaacctaaaagcaggtggtccaacggatcttgga-taggctctgataccatcttagaa 49190185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 22822507 - 22822417
Alignment:
Q  84 atggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgg 174  Q
    |||||| |||| |||||||||||||||| ||||||||| | ||||||  ||||| |||||||||| |||| ||||||||| | ||||||||    
T  22822507 atggtgagtggcccgatagcggaaacctgatagcaggtagcccaacgagtcttgtaggaggctctgatacaatcttagaatttgtggttgg 22822417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 5398633 - 5398682
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaa 128  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  5398633 cataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaa 5398682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 88 - 181
Target Start/End: Complemental strand, 7926480 - 7926388
Alignment:
Q  88 tgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaac 181  Q
    ||||||| || |||| |||||||| ||||||||||| |||| |||||||||| |||||||| |||| ||||| |||||| |||||||| |||||    
T  7926480 tgggtggccctatagtggaaacctgatagcaggtggcccaatggatcttgga-gaggctctgataccatcttcgaaatcttggttgggcctaac 7926388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 73 - 186
Target Start/End: Original strand, 11036663 - 11036775
Alignment:
Q  73 catggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggtt 172  Q
    ||||| ||| |||||||||||| | ||||||||||||||||||| |||||| |||| ||||||| || | |||||| |||| |||||| |||| ||||||    
T  11036663 catggacattaatggtgggtggcctgatagcggaaacctaatagtaggtggcccaatggatcttaga-gtggctctgataccatcttaaaaattgtggtt 11036761  T
Q  173 gggtctaactcaac 186  Q
     || ||||| ||||    
T  11036762 aggcctaacacaac 11036775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 13555422 - 13555501
Alignment:
Q  101 agcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaac 181  Q
    ||||||||||| |||||||||||||||| |||||||||| |||||||| |||| || | |||||| ||||||||| |||||    
T  13555422 agcggaaacctgatagcaggtggtccaatggatcttgga-gaggctctgataccatatcagaaattgtggttgggcctaac 13555501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 247
Target Start/End: Original strand, 36685873 - 36685965
Alignment:
Q  155 atcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcat 247  Q
    ||||||||||||||||||||||||||  ||||   ||||||||| |||| |||||||| | | | |||||||||||||| |||||||| ||||    
T  36685873 atcttagaaatcgtggttgggtctaatacaaccccacaaaactgacttgtgaggtgaggataacccccatttataaacacattgtcaggtcat 36685965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 180
Target Start/End: Original strand, 21646419 - 21646524
Alignment:
Q  73 catggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggtt 172  Q
    ||||| |||||||||||| ||||||||||| | |||| | ||||||||||  |||| | ||||||||| || ||||||||| |||||| |||||||||||    
T  21646419 catggacataaatggtgg-tggtccgatagtgaaaacatgatagcaggtgacccaatgaatcttggag-agactctaataccatcttaaaaatcgtggtt 21646516  T
Q  173 gggtctaa 180  Q
    ||| ||||    
T  21646517 gggcctaa 21646524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 186
Target Start/End: Complemental strand, 22445613 - 22445507
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||| ||||||| ||||||||| | || |||||||| ||||||  ||| |||||||| || ||||||| |||| ||||||||| | ||||||||||||    
T  22445613 cataaacggtgggtagtccgatagtgtaatcctaatagtaggtggctcaatggatcttgaag-aggctctgataccatcttagaatttgtggttgggtct 22445515  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  22445514 aacacaac 22445507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 27634247 - 27634312
Alignment:
Q  87 gtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatac 153  Q
    ||||||||||||||||| ||||||| |||||| ||||||||| |||||||||| |||||||| ||||    
T  27634247 gtgggtggtccgatagcagaaacctgatagcaagtggtccaatggatcttgga-gaggctctgatac 27634312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 13637505 - 13637452
Alignment:
Q  125 ccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||| ||| |||||||||||| || |||||||||||||||||||||    
T  13637505 ccaacggatcttagagaaggctctaataccattttagaaatcgtggttgggtct 13637452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 25323957 - 25324049
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttg 173  Q
    |||||||||||||| |||||| | |||||||||| || |||||| ||||| ||||||||| ||||||||  ||| || ||||||||| ||||||    
T  25323957 ataaatggtgggtgatccgatggtggaaacctaagagtaggtggcccaacagatcttgga-gaggctctgctaccatattagaaatcatggttg 25324049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 173
Target Start/End: Original strand, 30530090 - 30530178
Alignment:
Q  84 atggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttg 173  Q
    ||||||||||   |||||||||||| || ||||||||||| | || |||||||||| |||||||| |||| ||||||||||| |||||||    
T  30530090 atggtgggtgacgcgatagcggaaatctgatagcaggtggcctaatggatcttgga-gaggctctgataccatcttagaaattgtggttg 30530178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 212
Target Start/End: Original strand, 24513287 - 24513414
Alignment:
Q  84 atggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactc 183  Q
    ||||||||||  | ||||||||||  || ||||||| ||||||||  |||||| ||||||||||| |||  || |||||||||||| ||||| ||||| |    
T  24513287 atggtgggtgacctgatagcggaagtctgatagcagatggtccaatagatcttagaggaggctctgatatcatgttagaaatcgtgattgggcctaacac 24513386  T
Q  184 aactatacaaaactggcttgcgaggtgag 212  Q
    |||  ||| |||| |||||| ||||||||    
T  24513387 aaccctac-aaaccggcttgtgaggtgag 24513414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 50870647 - 50870715
Alignment:
Q  105 gaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttg 173  Q
    ||||||||||||||||| |  |||||||| |||||||||| ||| |||| ||||||||||| |||||||    
T  50870647 gaaacctaatagcaggtagcgcaacggatattggaggaggttctgataccatcttagaaattgtggttg 50870715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 43743123 - 43743049
Alignment:
Q  106 aaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaac 181  Q
    |||||| ||||||||||||| || ||||||| ||| ||||||| |||| |||||| ||||||||||| ||||||||    
T  43743123 aaacctgatagcaggtggtcaaatggatctttgag-aggctctgatactatcttataaatcgtggttaggtctaac 43743049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 31945083 - 31945037
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtc 125  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||||    
T  31945083 cataaatggtaggtggtccgatagcagaaacctaatagcatgtggtc 31945037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 5398368 - 5398429
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggag 140  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||  |||  |||||||||||    
T  5398368 cataaatggtgggtggtccgataggggaaacctgatagcagatgacccattggatcttggag 5398429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 21750075 - 21750152
Alignment:
Q  190 acaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagact 267  Q
    ||||||| |||||| |||||||| ||  | |||| ||||||| ||||||||| ||||||| |||| ||||||||||||    
T  21750075 acaaaaccggcttgtgaggtgaggaatgctcccacttataaagatattgtcatatcatctcttatccgatgtgagact 21750152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 269
Target Start/End: Complemental strand, 22863559 - 22863446
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttatt 255  Q
    |||||||||||||||||||| ||||| ||||   ||||||| |||||| | |||||| |   | |||| ||||||||| ||||||||  |||||| | |     
T  22863559 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttataaacacattgtcaggccatcttctgtc 22863460  T
Q  256 cgatgtgagactct 269  Q
    ||||||||||||||    
T  22863459 cgatgtgagactct 22863446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 30305435 - 30305342
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttg 173  Q
    ||||||| |||||||||||||| || |||||  |||||||||| ||||| |||| ||| |||||||||| |  | || ||| ||||||||||||    
T  30305435 ataaatgttgggtggtccgataacgtaaaccagatagcaggtgatccaaaggattttgaaggaggctctgacgccatattaaaaatcgtggttg 30305342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 9908771 - 9908854
Alignment:
Q  96 ccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaa 180  Q
    |||||| |||||| || ||||||||||||||||  ||||||||| ||| |||| |||| |||||||| |||||| || |||||||    
T  9908771 ccgataacggaaatctgatagcaggtggtccaatagatcttgga-gagactctgataccatcttagatatcgtgattaggtctaa 9908854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 211
Target Start/End: Original strand, 14783110 - 14783241
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||  |||||| |||||| || |||||| ||| ||||||| |||| | ||  || || ||||||| |||| || |||||||||||||||||| ||    
T  14783110 cataaatgacgggtggcccgataacgaaaacctgataacaggtggcccaaagaattgtgaag-aggctctgataccatattagaaatcgtggttgggcct 14783208  T
Q  179 aactcaactatacaaaactggcttgcgaggtga 211  Q
    ||| ||||   ||||||| |||||| |||||||    
T  14783209 aacacaaccccacaaaaccggcttgtgaggtga 14783241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 180
Target Start/End: Original strand, 42842166 - 42842266
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtcta 179  Q
    ||||||||| ||||||| |||||||||||| | ||| || ||||||||| ||||||| ||  ||||| | |||  |||||||| || ||||||| |||||    
T  42842166 ataaatggttggtggtcggatagcggaaacatgataacatgtggtccaatggatcttagaaaaggctatgatatcatcttagatattgtggttgagtcta 42842265  T
Q  180 a 180  Q
    |    
T  42842266 a 42842266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 53699043 - 53698999
Alignment:
Q  225 ttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    ||||||||||||||||||||||||| ||||||| |||| ||||||    
T  53699043 ttataaacatattgtcagatcatctcttattcgttgtgggactct 53698999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 181
Target Start/End: Complemental strand, 2516064 - 2516021
Alignment:
Q  138 gaggaggctctaatacgatcttagaaatcgtggttgggtctaac 181  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||    
T  2516064 gaggaggctctgatacgatcttagtaatcgtggttgggcctaac 2516021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 22845446 - 22845532
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    |||||||||||||||||||| ||||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| ||||||||    
T  22845446 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaacacattgtcag 22845532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 242
Target Start/End: Original strand, 34357970 - 34358115
Alignment:
Q  96 ccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaa 195  Q
    |||||||||||||||| ||| || |||| ||||  ||||||| || ||||||| |||  ||||||||||||||| ||| | ||||| ||||   ||||||    
T  34357970 ccgatagcggaaacctgataacaagtggcccaatagatcttgtag-aggctctgatatcatcttagaaatcgtgtttgagcctaacacaaccccacaaaa 34358068  T
Q  196 ctggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    | |||||  || ||||| |   | |||||||||||||| ||||||||    
T  34358069 ccggcttctgatgtgaggattgcccccatttataaacacattgtcag 34358115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 6778601 - 6778646
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggt 124  Q
    ||||||||| |||||| |||||||||||||||| |||||| |||||    
T  6778601 cataaatggggggtggcccgatagcggaaacctgatagcatgtggt 6778646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 21750261 - 21750334
Alignment:
Q  141 gaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaa 214  Q
    |||||||| |||| |||||| || ||||| ||||||||||| ||||   |||||||||| ||| ||||||||||    
T  21750261 gaggctctgataccatcttaaaattcgtgattgggtctaacacaacctcacaaaactggtttgtgaggtgagaa 21750334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 269
Target Start/End: Complemental strand, 22827623 - 22827510
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttatt 255  Q
    |||||||||||||||||||| ||||| ||||   ||||||| |||||| |||||||| |   | |||| |||||||||  |||||||  |||||  |||     
T  22827623 tcttagaaatcgtggttgggcctaacacaacccgacaaaaccggcttgtgaggtgaggattgcccccacttataaacacgttgtcaggccatctcctatc 22827524  T
Q  256 cgatgtgagactct 269  Q
    ||||||| ||||||    
T  22827523 cgatgtgggactct 22827510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 35609697 - 35609766
Alignment:
Q  143 ggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgag 212  Q
    |||||| |||| |||||||||||| ||||||||||| || ||||   ||||||| |||||| ||||||||    
T  35609697 ggctctgataccatcttagaaatcatggttgggtcttacacaaccccacaaaaccggcttgtgaggtgag 35609766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 269
Target Start/End: Complemental strand, 35788979 - 35788866
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttatt 255  Q
    |||||||||||||||||||| ||||| ||||   ||||||| |||||| ||| |||| |   | |||| ||||||||| ||||||||  ||| || |||     
T  35788979 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgcccccacttataaacacattgtcaggccatgttctatc 35788880  T
Q  256 cgatgtgagactct 269  Q
    ||||||| ||||||    
T  35788879 cgatgtgggactct 35788866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 40726807 - 40726750
Alignment:
Q  155 atcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||||||||||||||||||||| ||||| |||   |||||||| |||||| ||||||||    
T  40726807 atcttagaaatcgtggttgggcctaacacaatcctacaaaaccggcttgtgaggtgag 40726750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 1518263 - 1518163
Alignment:
Q  142 aggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtca 241  Q
    ||||||| |||| |||||||||||||||||| || ||||| ||||   ||||||| |||||| ||| |||| |   | |||| ||||||||| |||||||    
T  1518263 aggctctgataccatcttagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgagctgaggattgcccccacttataaacaaattgtca 1518164  T
Q  242 g 242  Q
    |    
T  1518163 g 1518163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 20822056 - 20821972
Alignment:
Q  158 ttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    |||||||||||||||||| ||||| |||    ||||||| |||||| ||||||||||   | |||| ||||||||| ||||||||    
T  20822056 ttagaaatcgtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgagaattgcccccacttataaacaaattgtcag 20821972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 21498878 - 21498794
Alignment:
Q  158 ttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    |||||||||||||||||| ||||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| ||||||||    
T  21498878 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 21498794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 40965193 - 40965133
Alignment:
Q  113 atagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttg 173  Q
    |||||| ||||||||||||||||| |||||| || | |||| || |||||||| |||||||    
T  40965193 atagcatgtggtccaacggatcttagaggagactatgataccatattagaaattgtggttg 40965133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 79 - 247
Target Start/End: Complemental strand, 25620297 - 25620130
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| || ||||||||||||| ||||||||||| |||| |||||||||| |||||||| |||| ||||||||||||||||||||| ||    
T  25620297 cataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatggatcttgga-gaggctctgataccatcttagaaatcgtggttgggcct 25620199  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcat 247  Q
    ||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| |||||||| ||||    
T  25620198 aacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcaggtcat 25620130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 269
Target Start/End: Original strand, 36277149 - 36277338
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||| |||||||| |||  ||||||||||||||||||||| ||    
T  36277149 cataaatggtgggtggtccgatagcggaaacctgatagtaggtggcccaatggatcttgga-gaggctctgataacatcttagaaatcgtggttgggact 36277247  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    ||| ||||   ||||||  | |||| |||||||| |   | |||| ||||||||| ||||||||  ||| | || | ||||||||||||||    
T  36277248 aacacaaccccacaaaatcgacttgtgaggtgaggattgcccccacttataaacacattgtcaggccatgtcttgtccgatgtgagactct 36277338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 98 - 243
Target Start/End: Original strand, 26239857 - 26240002
Alignment:
Q  98 gatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaact 197  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||   |||| ||     
T  26239857 gataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaattgtggttgggtctaacacaaccccacaatacc 26239956  T
Q  198 ggcttgcgaggtgagaaaatcacccatttataaacatattgtcaga 243  Q
    | |||| |||||||| |   | |||| ||||||||| |||||||||    
T  26239957 gacttgtgaggtgaggattgcccccacttataaacacattgtcaga 26240002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 79 - 242
Target Start/End: Complemental strand, 29469766 - 29469604
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||||||||||| ||| ||| ||||||| |||| |||||||||| |||||||| |||| || |||||||||||||||||| ||    
T  29469766 cataaatggtgggtggcccgatagcggaagcctgataacaggtggcccaatggatcttgga-gaggctctgataccatattagaaatcgtggttgggcct 29469668  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    ||| ||||   ||||||| ||||||  ||||||| |   | |||| ||||||||| ||||||||    
T  29469667 aacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 29469604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 21861455 - 21861354
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||||||||||||||| ||| ||||||| |||| |||||||||| |||||||| |||| ||||||||||| ||||||||| ||    
T  21861455 cataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttgga-gaggctctgataccatcttagaaatggtggttgggcct 21861357  T
Q  179 aac 181  Q
    |||    
T  21861356 aac 21861354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 79 - 186
Target Start/End: Complemental strand, 33834352 - 33834246
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| ||||||| | |||||| ||||||||||| |||| |||||||||| |||||||| |||| ||||||||||| ||||||||| ||    
T  33834352 cataaatggtgggtggcccgatagggaaaacctgatagcaggtggcccaatggatcttgga-gaggctctgataccatcttagaaatggtggttgggcct 33834254  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  33834253 aacacaac 33834246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 211
Target Start/End: Original strand, 33996237 - 33996365
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||| |||| |||   |||| |||||||| |||| ||||||||||||||||||||| ||    
T  33996237 cataaatggtgggtggcccgattgcggaaacctgatagcaggtggcccaatgga---tgga-gaggctctgataccatcttagaaatcgtggttgggcct 33996332  T
Q  179 aactcaactatacaaaactggcttgcgaggtga 211  Q
    ||| |||||  ||||||| | |||| |||||||    
T  33996333 aacacaactccacaaaaccgacttgtgaggtga 33996365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 79 - 186
Target Start/End: Complemental strand, 1596754 - 1596648
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||||||||||||||| ||| || |||| |||| |||||||||| |||||||| |||| ||||||||||| |||||| || ||    
T  1596754 cataaatggtgggtggcccgatagcggaaacctgataacatgtggcccaatggatcttgga-gaggctctgataccatcttagaaattgtggttaggcct 1596656  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  1596655 aacacaac 1596648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 22574762 - 22574669
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttg 173  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||| |||| |||||||||| ||| |||| |||| ||| ||||||| |||||||    
T  22574762 cataaatggtgggtggtccgatagctgaaacctgatagcaggtggcccaatggatcttgga-gagactcttataccatcatagaaattgtggttg 22574669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 242
Target Start/End: Complemental strand, 4886490 - 4886328
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||||||  ||||||  ||||| | ||||||||||| |||| |||||||||| ||| | || |||| ||||||||||||||||||||| ||    
T  4886490 cataaatggtgggtggctcgatagtagaaacttgatagcaggtggcccaatggatcttgga-gagaccctgataccatcttagaaatcgtggttgggcct 4886392  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    ||| ||||    | |||| |||||| |||||||| |   | |||||| ||||||||||||||||    
T  4886391 aacacaacctcgccaaaccggcttgtgaggtgaggattgcccccattaataaacatattgtcag 4886328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 10903234 - 10903085
Alignment:
Q  91 gtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactata 190  Q
    ||||||||||||||||||| | ||| ||||||| |||| |||||||||| || ||||| |||  || |||| ||||||||||||| ||||| |||||  |    
T  10903234 gtggtccgatagcggaaacatgataacaggtggcccaatggatcttgga-gaagctctgatatcattttagtaatcgtggttggggctaacacaactcca 10903136  T
Q  191 caaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtca 241  Q
    |||||| |||||| |||||||| |   | || | |||||||||||||||||    
T  10903135 caaaaccggcttgtgaggtgaggattacccctacttataaacatattgtca 10903085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 36993231 - 36993332
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||| ||||||||||| |||||||||| || |||||| |||| |||| ||||||| || |||||||| |||| |||||||||||| ||||||| |||    
T  36993231 cataaatagtgggtggtccaatagcggaaatctgatagcacgtggcccaatggatctt-gaagaggctctgataccatcttagaaatcatggttggatct 36993329  T
Q  179 aac 181  Q
    |||    
T  36993330 aac 36993332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 48661478 - 48661610
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||| ||||||||||| |||||||||||  ||| || ||||  | |||||||| |||  || |||||||||||||||||||||    
T  48661478 cataaatggtgggtggcccgaaagcggaaacctgatagcaggtggctcaatggttctt-aaagaggctctgatatcatattagaaatcgtggttgggtct 48661576  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| |||    ||||||| |||||| ||||||||    
T  48661577 aacacaatctcacaaaaccggcttgtgaggtgag 48661610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 212
Target Start/End: Original strand, 30727278 - 30727410
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtcta 179  Q
    ||||||||||||||| || ||||||||||||| |||| |||||| |||||  ||||||||  || |||| |||| |||||| ||||  |||| ||| |||    
T  30727278 ataaatggtgggtggcccaatagcggaaacctgatagaaggtggcccaacaaatcttggattagactctgataccatcttaaaaattctggtcgggacta 30727377  T
Q  180 actcaactatacaaaactggcttgcgaggtgag 212  Q
    |||||||   ||||||| |||||| ||||||||    
T  30727378 actcaacctcacaaaaccggcttgtgaggtgag 30727410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 212
Target Start/End: Original strand, 31485583 - 31485714
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtcta 179  Q
    ||||||||||||||| ||||||| | |||||| |||| |||||| |||| |||||||| | | |||||| |||| ||||||||||| |||||| || |||    
T  31485583 ataaatggtgggtggcccgatagtgaaaacctgatagtaggtggcccaatggatcttgta-gcggctcttataccatcttagaaattgtggttaggccta 31485681  T
Q  180 actcaactatacaaaactggcttgcgaggtgag 212  Q
    || |||||  ||||||| ||||||  |||||||    
T  31485682 acacaacttcacaaaaccggcttgtcaggtgag 31485714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 269
Target Start/End: Complemental strand, 28080806 - 28080637
Alignment:
Q  98 gatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaact 197  Q
    |||||||||||| | ||||||||||| ||||  ||||||| || ||||||| |||  |||||||||||||||||||| ||||||  |||   |||||||     
T  28080806 gatagcggaaacttgatagcaggtggcccaatagatcttgaag-aggctctgatatcatcttagaaatcgtggttggatctaacataaccccacaaaacc 28080708  T
Q  198 ggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    | |||| || |||| ||| |  || | ||||||||| |||||||| |||||| |||| ||||||||||||||    
T  28080707 gacttgtgaagtga-aaattgccctacttataaacacattgtcaggtcatctcttatccgatgtgagactct 28080637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 242
Target Start/End: Complemental strand, 34027554 - 34027392
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||  |||||| ||||||  |||||||| ||| ||||||| |||| | ||| || || |||||||||||| || |||||||||||||||||| ||    
T  34027554 cataaatgacgggtggcccgataatggaaacctgataacaggtggcccaaagaatcgtgaag-aggctctaataccatattagaaatcgtggttgggcct 34027456  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    ||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| ||||||||    
T  34027455 aacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 34027392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 2404331 - 2404424
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttg 173  Q
    |||||| ||| |||||||| ||||||||||||| ||||||||||  |||| |||| || || |||||||| |||| |||||||||||||||||||    
T  2404331 cataaacggtaggtggtccaatagcggaaacctgatagcaggtgacccaatggat-ttcgaagaggctctgataccatcttagaaatcgtggttg 2404424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 248
Target Start/End: Original strand, 3519962 - 3520131
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||  ||||||||| |||||  ||||||||||| |||| ||||| |||| |||||||| |||| | || ||||||||||||||   ||    
T  3519962 cataaatggtgggtgtcccgatagcgaaaaccagatagcaggtggcccaatggatcatgga-gaggctctgataccaactaagaaatcgtggttgaacct 3520060  T
Q  179 aactcaa-ctatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatc 248  Q
    ||| ||| |  || ||||| ||||||||||||||| |   | |||| ||||||||| ||||||||| ||||    
T  3520061 aacacaacccttataaaaccggcttgcgaggtgaggattgcccccacttataaacacattgtcagaccatc 3520131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 96 - 209
Target Start/End: Original strand, 48417454 - 48417567
Alignment:
Q  96 ccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaa 195  Q
    ||||||||||||||   ||||||||||| |||| |||||  |||| |||||||||||| |||| |||||| ||||||||| ||||| ||||   ||||||    
T  48417454 ccgatagcggaaacaagatagcaggtggcccaatggatcaaggagaaggctctaataccatctaagaaattgtggttgggcctaacacaaccccacaaaa 48417553  T
Q  196 ctggcttgcgaggt 209  Q
    |||| ||| |||||    
T  48417554 ctggtttgtgaggt 48417567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 9689045 - 9689124
Alignment:
Q  101 agcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaac 181  Q
    ||||||||||| |||||||||||||||| |||||||||| |||||||| |||| || | |||||| ||||||||| |||||    
T  9689045 agcggaaacctgatagcaggtggtccaatggatcttgga-gaggctctgataccatatcagaaattgtggttgggcctaac 9689124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 186
Target Start/End: Complemental strand, 4507093 - 4506987
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||| |||| ||||||| |||| |||||| || ||||||||||  |||| |||||||| |  ||||||| |||| |||||||||||||| |||||||||    
T  4507093 cataactggttggtggtctgataacggaaatctgatagcaggtgacccaatggatcttgaaa-aggctctgatacaatcttagaaatcgtagttgggtct 4506995  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  4506994 aacacaac 4506987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 10882162 - 10882268
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||  |||| |||||||| ||||||||| ||| ||||||| |||| | ||| || || ||||||| |||| ||||||||||||||||||||| ||    
T  10882162 cataaatgacgggttgtccgataacggaaacctgataacaggtggcccaaagaatcgtgaag-aggctctgataccatcttagaaatcgtggttgggcct 10882260  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  10882261 aacacaac 10882268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 2315184 - 2315269
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaat 165  Q
    |||||||||||||||||||||| ||||||| || ||||||||||| |||| ||| |||||| || ||| |||||| || ||||||||    
T  2315184 cataaatggtgggtggtccgattgcggaaatctgatagcaggtggcccaatggaccttgga-gaagctataataccattttagaaat 2315269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 21821947 - 21821866
Alignment:
Q  99 atagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaac 181  Q
    |||||||||||||  |||||| ||| |||||| |||||| || ||||||| |||| ||||||||||||||||||||| |||||    
T  21821947 atagcggaaacctgctagcagttggcccaacgtatcttgaag-aggctctgataccatcttagaaatcgtggttgggcctaac 21821866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 212
Target Start/End: Complemental strand, 31892313 - 31892180
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtgg-ttgggtc 177  Q
    |||||||||||||||| | |||| ||||||||| ||||||||||| ||||  | ||||||| |||||||| || | |||||||| |||| || ||||| |    
T  31892313 cataaatggtgggtggcctgataacggaaacctgatagcaggtggcccaataggtcttgga-gaggctctgattccatcttagagatcggggtttgggcc 31892215  T
Q  178 taactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||||  ||||  ||||||| |||||| ||||||||    
T  31892214 taacataactccacaaaaccggcttgtgaggtgag 31892180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 20305455 - 20305358
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtg----gtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttg 173  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||     ||||| ||||||| || |||||||| |||| |||||| ||||||||||||    
T  20305455 cataaatggtgggtggcccgatagcggaaacctgatagcagatgacccatccaatggatctt-gaagaggctctgataccatcttaaaaatcgtggttg 20305358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 269
Target Start/End: Original strand, 44874348 - 44874458
Alignment:
Q  159 tagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcga 258  Q
    ||||||||||||||||| ||||| |||| ||||||||  || ||| |||||||| |  || |||| ||||||||| |||||||| | ||||  ||| |||    
T  44874348 tagaaatcgtggttgggcctaacacaaccatacaaaatcggtttgtgaggtgaggatttcccccacttataaacacattgtcaggttatctcctatccga 44874447  T
Q  259 tgtgagactct 269  Q
    |||| ||||||    
T  44874448 tgtgggactct 44874458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 269
Target Start/End: Original strand, 3038068 - 3038196
Alignment:
Q  141 gaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtc 240  Q
    |||||||| |||  |||||||||||| |||||||| ||||| ||||   ||||||| |||||| || ||||| |   | |||| ||||||||| |||||     
T  3038068 gaggctctgatattatcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgacgtgaggattgcccccacttataaacacattgtt 3038167  T
Q  241 agatcatcttttattcgatgtgagactct 269  Q
    |||  |||| |||||||||||| ||||||    
T  3038168 agacaatctcttattcgatgtgggactct 3038196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 3519883 - 3519923
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcag 119  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  3519883 cataaatggtgggtggcccgatagcggaaacctgatagcag 3519923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 5871878 - 5871974
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttggg 175  Q
    |||||||||| ||| |||||||||||||||  | ||||||||||   ||| |||||||   | ||||||| |||  |||||||||||||||||||||    
T  5871878 cataaatggtaggtcgtccgatagcggaaatatgatagcaggtgactcaatggatcttaacgcaggctctgatatcatcttagaaatcgtggttggg 5871974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 165
Target Start/End: Complemental strand, 17948393 - 17948310
Alignment:
Q  82 aaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaat 165  Q
    ||||||||||||||| ||||||||||| || |||  | |||  |||||  ||||||||| ||||||| |||| |||||||||||    
T  17948393 aaatggtgggtggtctgatagcggaaatctgataataagtgacccaacaaatcttggagtaggctctgataccatcttagaaat 17948310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 20305586 - 20305692
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||| |  ||| | |||||||||| || ||||||| |||||||||| ||||||||||| | |||  || ||||||||| ||||| || ||    
T  20305586 cataaatggtgggtagctcgacaacggaaacctagtatcaggtgg-ccaacggatcatggaggaggctatgatagcatattagaaatcatggttaggcct 20305684  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  20305685 aacacaac 20305692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 21054951 - 21055038
Alignment:
Q  155 atcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    ||||||||||| ||||||||| ||||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||||||||||||    
T  21054951 atcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacatattgtcag 21055038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 44342878 - 44342945
Alignment:
Q  106 aaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttg 173  Q
    |||| ||||||||||||| ||||| ||||||||||||| || | |||| |||||| |||| |||||||    
T  44342878 aaacttaatagcaggtggcccaacagatcttggaggagactttgataccatcttaaaaattgtggttg 44342945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 5871734 - 5871852
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||| ||| ||||||||||  |||  | |||| |||||   ||| |||||||   ||||||||| |||  ||||||||||||||||||||| ||    
T  5871734 cataaatggtaggtcgtccgatagcaaaaatatgatagtaggtgactcaatggatcttaacggaggctctgatatcatcttagaaatcgtggttgggact 5871833  T
Q  179 aactcaactatacaaaact 197  Q
    ||| ||||  |||||||||    
T  5871834 aacacaaccctacaaaact 5871852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 36575095 - 36575157
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggagga 142  Q
    ||||||||| ||||||| ||||| | |||| | |||||| ||||||||| |||||||||||||    
T  36575095 ataaatggtcggtggtcggatagtgaaaacatgatagcatgtggtccaatggatcttggagga 36575157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 40746190 - 40746240
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaac 129  Q
    ||||||||||||||||| ||||| || |||||| ||||||||||| |||||    
T  40746190 cataaatggtgggtggttcgataacgaaaacctgatagcaggtggcccaac 40746240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 47710529 - 47710415
Alignment:
Q  155 atcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttat 254  Q
    ||||||||||| ||||||||| ||||| ||||   |||||||||||||| |||||||| |   | |||| ||||||||| ||||| ||  ||||   |||    
T  47710529 atcttagaaatggtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaacacattgtaaggccatcacctat 47710430  T
Q  255 tcgatgtgagactct 269  Q
     ||||||||||||||    
T  47710429 ccgatgtgagactct 47710415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 47722185 - 47722071
Alignment:
Q  155 atcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttat 254  Q
    ||||||||||| ||||||||| ||||| ||||   |||||||||||||| |||||||| |   | |||| ||||||||| ||||| ||  ||||   |||    
T  47722185 atcttagaaatggtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaacacattgtaaggccatcacctat 47722086  T
Q  255 tcgatgtgagactct 269  Q
     ||||||||||||||    
T  47722085 ccgatgtgagactct 47722071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 6001498 - 6001547
Alignment:
Q  220 cccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    |||| |||||||||||||||||| ||||||| ||| ||||||| ||||||    
T  6001498 cccacttataaacatattgtcaggtcatcttctatccgatgtgggactct 6001547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 17202279 - 17202178
Alignment:
Q  141 gaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtc 240  Q
    |||||||| |||| || ||| |||||||||||||| ||||| ||||   ||||||| |||||| ||| ||||||   | |||| ||||||||| ||||||    
T  17202279 gaggctctgataccatattaaaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgagaattgcccccacttataaacaaattgtc 17202180  T
Q  241 ag 242  Q
    ||    
T  17202179 ag 17202178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 186
Target Start/End: Original strand, 22339543 - 22339632
Alignment:
Q  97 cgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaac 186  Q
    |||||| | ||||||  ||||||||||||||| |||||||   ||||||||| |||| || |||||||| || |||||| ||||| ||||    
T  22339543 cgatagagaaaacctggtagcaggtggtccaatggatcttaacggaggctctgataccatattagaaattgtcgttgggcctaacacaac 22339632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 32278994 - 32279043
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaa 128  Q
    |||||||||||| ||| ||||||||| |||||| ||||||||||| ||||    
T  32278994 cataaatggtggatggcccgatagcgaaaacctgatagcaggtggcccaa 32279043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 40121909 - 40121970
Alignment:
Q  142 aggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttg 203  Q
    ||||||| |||| ||||||||||||||||||||| ||||| ||||   ||||||| ||||||    
T  40121909 aggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttg 40121970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 29469923 - 29469839
Alignment:
Q  158 ttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    |||||||||||||||||| ||||| |||||  ||||||| ||||||  ||||||| |   | |||| ||||||||| ||||||||    
T  29469923 ttagaaatcgtggttgggcctaacacaactccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 29469839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 203
Target Start/End: Original strand, 31257190 - 31257313
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||  |||||| |||||| ||||||||| ||| ||| ||| |||| | ||| || || || |||| |||| || |||||||||||||||||| ||    
T  31257190 cataaatgacgggtggcccgataacggaaacctgataacagatggcccaaagaatcgtgaagaag-ctctgataccatattagaaatcgtggttgggcct 31257288  T
Q  179 aactcaactatacaaaactggcttg 203  Q
    ||| ||||   ||||||| ||||||    
T  31257289 aacacaaccccacaaaaccggcttg 31257313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 40746581 - 40746497
Alignment:
Q  158 ttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    ||||||||| |||||||| ||||| ||||   |||||||||||||| |||||| | |  || |||| ||||||||| ||||||||    
T  40746581 ttagaaatcatggttgggcctaacacaacctcacaaaactggcttgtgaggtgtggatttcccccacttataaacaaattgtcag 40746497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 248
Target Start/End: Original strand, 48243060 - 48243152
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatc 248  Q
    ||||| |||||||||||||| ||||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| ||||||||| ||||    
T  48243060 tcttacaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcagaccatc 48243152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 79 - 186
Target Start/End: Complemental strand, 33156895 - 33156788
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||  |||||||||||||||| |||||||||||| ||||||||||||||||||||| ||    
T  33156895 cataaatggtggatggcccgatagcggaaacctgatagcaggtgaaccaacggatcttggagtaggctctaataccatcttagaaatcgtggttgggcct 33156796  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  33156795 aacacaac 33156788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 79 - 212
Target Start/End: Complemental strand, 35772190 - 35772058
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||| |||| |||||||| || ||||||| |||| ||||||||||||||||||||| ||    
T  35772190 cataaatggtgggtggcccgatagcggaaacctgatagcagatggcccaatggatcttg-agaaggctctgataccatcttagaaatcgtggttgggcct 35772092  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||||   ||||||| |||||||||||||||    
T  35772091 aacacaaccccacaaaaccggcttgcgaggtgag 35772058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 269
Target Start/End: Original strand, 2859550 - 2859739
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||||||| |||||||||||| |||||| |||| ||||||| || ||||||||||||| |||||||||||  |||||||| ||    
T  2859550 cataaatggtgggtggcccgatagcagaaacctaatagaaggtggcccaatggatctt-gaagaggctctaataccatcttagaaatgatggttggggct 2859648  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    ||| ||||   ||||||| |||||| |||||||| |   | |||| | ||||||| ||||||||| ||||   ||| ||||||||||||||    
T  2859649 aacacaacctcacaaaaccggcttgtgaggtgaggattacccccactaataaacacattgtcagaccatcacctatccgatgtgagactct 2859739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 39348275 - 39348407
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||| ||| ||||||||||||||| |||| |||||||||||||| |||||| ||    
T  39348275 cataaatggtgggtggtccgatagtggaaacctgatagcaggtggcccaatggaccttggaggaggctctgataccatcttagaaatcgt-gttgggcct 39348373  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||||   ||||||| || ||| ||||||||    
T  39348374 aacacaaccccacaaaaccggtttgtgaggtgag 39348407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 79 - 262
Target Start/End: Complemental strand, 30369996 - 30369814
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||  |||| |||||||||| |||||||| |||| ||||||||||||||||||||| ||    
T  30369996 cataaatggtgggtggcccgatagtggaaacctgatagcaggtgacccaatggatcttgga-gaggctctgatacaatcttagaaatcgtggttgggcct 30369898  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtg 262  Q
    ||| ||||   ||||||||  |||| |||||||| |   | || | |||||||||||||||| || |||||  ||| |||||||    
T  30369897 aacacaaccccacaaaactatcttgtgaggtgaggattgcccctacttataaacatattgtcggaccatctcatatccgatgtg 30369814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 79 - 242
Target Start/End: Original strand, 4112929 - 4113091
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||||||||| ||||||||||||| ||||  |||||  ||| |||||||||| |||||||  |||| ||||||||||||||||||||| ||    
T  4112929 cataaatggtgggtggtccaatagcggaaacctgatagatggtggctcaatggatcttgga-gaggctccgataccatcttagaaatcgtggttgggcct 4113027  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    ||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| ||||||||    
T  4113028 aacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 4113091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 31496294 - 31496400
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||  | ||| ||||||||| ||||||||||||||| ||| ||||    
T  31496294 cataaatggtgggtggtccgatagcgggaacctgatagcaggtggtccaatggatctt-aaagagactctaatactatcttagaaatcgtgattgagtct 31496392  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  31496393 aacacaac 31496400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 4112698 - 4112783
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaat 165  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||| |||||||| |||| |||||||||||    
T  4112698 cataaatggtgggtggttcgatagcggaaacctgatagcaggtggtccaatggatcttgga-gaggctctgataccatcttagaaat 4112783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 80 - 186
Target Start/End: Complemental strand, 26177068 - 26176963
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtcta 179  Q
    ||||||||||||||||||||||||||||| || ||||||||||| |||| |||||||||| |||||||| |||  ||||||||||||| ||||||| |||    
T  26177068 ataaatggtgggtggtccgatagcggaaatctgatagcaggtggcccaatggatcttgga-gaggctctgatatcatcttagaaatcgcggttgggccta 26176970  T
Q  180 actcaac 186  Q
    || ||||    
T  26176969 acacaac 26176963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 262
Target Start/End: Original strand, 26346855 - 26347073
Alignment:
Q  43 cccctcacatccaagatttgacatttggagcatggtcataaatggtgggtggtccgatag-cggaaacctaatagcaggtggtccaacggatcttggagg 141  Q
    |||||||| ||||||| |  |||| |||||||||| | |||||||||| ||||||| ||  |  |||||||||||||||||||||||||||| || ||||    
T  26346855 cccctcacgtccaagactgaacatctggagcatggacctaaatggtggctggtccgttaaacaaaaacctaatagcaggtggtccaacggat-tttgagg 26346953  T
Q  142 aggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtca 241  Q
    ||||||| |||  |||||||||||||||| || | ||||| ||||   ||||||| |||||| |||||||| |      ||| ||||||||| || ||||    
T  26346954 aggctctgatatcatcttagaaatcgtgg-tgaggctaacacaaccccacaaaacgggcttgtgaggtgaggattgtctccacttataaacacatcgtca 26347052  T
Q  242 gatcatcttttattcgatgtg 262  Q
    |||||||| ||||||| ||||    
T  26347053 gatcatctcttattcggtgtg 26347073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 269
Target Start/End: Original strand, 25145647 - 25145832
Alignment:
Q  83 aatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaact 182  Q
    ||||||||||||||||||| ||||||||| |||||||||||  |||  ||||||||| |||||||| |||  |||||||||||| |||||||| |||||     
T  25145647 aatggtgggtggtccgataacggaaacctgatagcaggtgggtcaatagatcttgga-gaggctctgatatcatcttagaaatcatggttgggcctaaca 25145745  T
Q  183 caactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    ||||   ||||| | |||||| |||||||| |   | |||| | ||||| | |||||||| |||||   ||| ||||||||||||||    
T  25145746 caaccccacaaatccggcttgtgaggtgaggattgcccccactaataaatacattgtcaggtcatcacctatccgatgtgagactct 25145832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 212
Target Start/End: Complemental strand, 27413508 - 27413376
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| ||||||||||||| || ||| ||||||||| ||  ||||||||| |||||||| |||  ||||||||||||||||||||  ||    
T  27413508 cataaatggtgggtggcccgatagcggaaatctgataacaggtggtctaatagatcttgga-gaggctctgatatcatcttagaaatcgtggttggacct 27413410  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||||   ||||||  |||||| ||||||||    
T  27413409 aacacaacctcacaaaatcggcttgtgaggtgag 27413376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 203
Target Start/End: Original strand, 51460368 - 51460488
Alignment:
Q  82 aaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaac 181  Q
    ||||||||||| | |||||||||||||||| ||||||||||| |||| |||||||||| |||||||| |||  || ||||||||  |||||||| |||||    
T  51460368 aaatggtgggtcgcccgatagcggaaacctgatagcaggtggcccaatggatcttgga-gaggctctgatatcattttagaaattatggttgggcctaac 51460466  T
Q  182 tcaactatacaaaactggcttg 203  Q
     ||||   ||||||||||||||    
T  51460467 acaaccccacaaaactggcttg 51460488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 38733307 - 38733219
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttg 173  Q
    |||||||||||||||    ||||||||||||| |||||||||||||||| |||||||||| ||| |||| |||| |||||||||||||||||||    
T  38733307 ataaatggtgggtgg----atagcggaaacctgatagcaggtggtccaatggatcttgga-gagactctgataccatcttagaaatcgtggttg 38733219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 9146786 - 9146872
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaat 165  Q
    |||||||||||||||  |||||||||| ||||| || |||| |||||||| ||||||||||| ||||||| |||| |||||||||||    
T  9146786 cataaatggtgggtgacccgatagcggtaaccttattgcagttggtccaatggatcttggagaaggctctgataccatcttagaaat 9146872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 249
Target Start/End: Original strand, 26173379 - 26173548
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||| | ||||  | || |||||||| |||  || |||||||  ||||||||  ||    
T  26173379 cataaatggtggggggtccgatagcggaaacctgatagcaggtggtccgatggat-atcgaagaggctctgatatcattttagaaagggtggttggacct 26173477  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatct 249  Q
    ||| ||||   ||||||| ||||| | |||||||||   | |||| ||||||||| ||||||||| |||||    
T  26173478 aacacaaccccacaaaaccggcttacaaggtgagaattgcccccacttataaacacattgtcagaccatct 26173548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 4098326 - 4098432
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||| ||||||||| |||||||| ||||||| || |||||||| |||| |||||||| || || |||| |||| | ||||||||||||||||||| ||    
T  4098326 cataaagggtgggtggcccgatagcagaaacctgattgcaggtggcccaatggatcttgaag-agtctctgataccaacttagaaatcgtggttgggcct 4098424  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  4098425 aacacaac 4098432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 186
Target Start/End: Complemental strand, 16163094 - 16162988
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||| ||||| |||||||||||||||| ||||||||||| |||  |||||||||| |||||| | |||  |||||| |||| ||||||| ||||    
T  16163094 cataaatggtaggtggcccgatagcggaaacctgatagcaggtggcccattggatcttgga-gaggctttgatatcatcttaaaaattgtggttgagtct 16162996  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  16162995 aacacaac 16162988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 25713319 - 25713258
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggag 140  Q
    |||||||||||||||| |||||||||||||| | ||||||||||| |||| |||||||||||    
T  25713319 cataaatggtgggtggcccgatagcggaaacttgatagcaggtggcccaatggatcttggag 25713258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 80 - 180
Target Start/End: Original strand, 5953660 - 5953760
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtcta 179  Q
    ||||||| ||||||| ||||||  |||||||| | ||||||||| | ||||||||||||| |||||||| |||| |||||| |||| | ||||||| |||    
T  5953660 ataaatgttgggtggcccgataatggaaacctgaaagcaggtggcctaacggatcttggatgaggctctgataccatcttaaaaattgaggttgggccta 5953759  T
Q  180 a 180  Q
    |    
T  5953760 a 5953760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 11234338 - 11234243
Alignment:
Q  119 ggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaa 214  Q
    ||||| ||||||||||||||||||||||||||||| |||||| || | ||||||||| ||||  ||||   ||||||| |||||  ||||||||||    
T  11234338 ggtggcccaacggatcttggaggaggctctaataccatcttataatttgtggttgggcctaatacaaccccacaaaaccggcttatgaggtgagaa 11234243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 181
Target Start/End: Original strand, 32783223 - 32783305
Alignment:
Q  98 gatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaac 181  Q
    |||||| ||||||| |||||||||||| ||| |||||||| || || |||| |||| |||||||||||||||||||| ||||||    
T  32783223 gatagcagaaacctgatagcaggtggtacaatggatcttgaag-agactctgataccatcttagaaatcgtggttggatctaac 32783305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 52961508 - 52961450
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttg 137  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||| |||| ||||||||    
T  52961508 cataactggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttg 52961450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 51460007 - 51460079
Alignment:
Q  113 atagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaac 186  Q
    ||||||||||| |||| ||||||||||| |||| ||||||| ||||||||||| ||||||||| ||||| ||||    
T  51460007 atagcaggtggcccaatggatcttggag-aggcgctaataccatcttagaaattgtggttgggcctaacacaac 51460079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 212
Target Start/End: Complemental strand, 51589967 - 51589835
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||  |||||| |||||| |||||||||||||  |||||| |||| | ||| || || ||||||| |||| || |||||||||||||||||| ||    
T  51589967 cataaatgacgggtggcccgataacggaaacctaataataggtggcccaaagaatcgtgaag-aggctctgataccatattagaaatcgtggttgggcct 51589869  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||||   ||||||  |||||| ||||||||    
T  51589868 aacacaaccccacaaaatcggcttgtgaggtgag 51589835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 17208714 - 17208650
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggagg 144  Q
    ||||||||||||||| |||||||||||||||| ||||||| |||  ||| |||||||| ||||||    
T  17208714 ataaatggtgggtggcccgatagcggaaacctgatagcagatggctcaagggatcttgaaggagg 17208650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 156 - 272
Target Start/End: Complemental strand, 40079237 - 40079121
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttatt 255  Q
    |||||||||||||||||||| ||||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| |||||||| ||||||  |||     
T  40079237 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcaggtcatctcctatc 40079138  T
Q  256 cgatgtgagactctaac 272  Q
    ||||||  |||||||||    
T  40079137 cgatgtaggactctaac 40079121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 369793 - 369706
Alignment:
Q  79 cataaatggtgggtggtcc-gatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaat 165  Q
    |||||||||||||||  || |||||||||||||| ||||||| || ||||| ||||||| ||| ||||||| |||| ||| |||||||    
T  369793 cataaatggtgggtgaccccgatagcggaaacctgatagcagctgatccaatggatcttagagtaggctctgataccatcctagaaat 369706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 12376596 - 12376702
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||| ||||| | |||||| ||| ||| ||||||||||| |||| |||||||   ||| |||||||||| | |||||||||||| |||||  ||    
T  12376596 cataaatggtaggtggcctgatagcagaa-cctgatagcaggtggcccaatggatcttaacggatgctctaataccaacttagaaatcgtcgttggacct 12376694  T
Q  179 aactcaac 186  Q
    ||||||||    
T  12376695 aactcaac 12376702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 17452812 - 17452882
Alignment:
Q  141 gaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtga 211  Q
    ||||||||||||| |||||||||||||||||| || ||||| ||||   ||||||| |||||| |||||||    
T  17452812 gaggctctaataccatcttagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtga 17452882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 25145483 - 25145597
Alignment:
Q  155 atcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttat 254  Q
    ||||||||||||||||||||||||||| ||||   ||||||| | |||| |||||||| |   | |||| | ||||||| ||||||||| ||||   |||    
T  25145483 atcttagaaatcgtggttgggtctaacacaacctcacaaaaccgacttgtgaggtgaggattgcccccactaataaacacattgtcagaccatcacctat 25145582  T
Q  255 tcgatgtgagactct 269  Q
     ||||||||||||||    
T  25145583 ccgatgtgagactct 25145597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 38668292 - 38668163
Alignment:
Q  73 catggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggtt 172  Q
    ||||| |||||||| | ||||  |||||||| ||||||| ||| ||||||  |||| ||||| ||||| ||||||| |||| ||||||||||| ||| ||    
T  38668292 catggacataaatgataggtgacccgatagcagaaacctgataacaggtgacccaatggatcatggag-aggctctgataccatcttagaaattgtgatt 38668194  T
Q  173 gggtctaactcaactatacaaaactggcttg 203  Q
    ||| ||||| ||||   |||||| |||||||    
T  38668193 gggcctaacacaaccccacaaaattggcttg 38668163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 7826094 - 7826143
Alignment:
Q  220 cccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    |||| ||||||||| ||||||||| |||||||||||||||||| ||||||    
T  7826094 cccacttataaacacattgtcagaccatcttttattcgatgtgggactct 7826143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 212
Target Start/End: Original strand, 12325510 - 12325615
Alignment:
Q  107 aacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcga 206  Q
    ||||| ||||||||||| |||| |||||||   ||| |||||||||| || |||||||  || |||||  ||||||||||   |||||||||||||| ||    
T  12325510 aacctgatagcaggtggcccaatggatcttaacggatgctctaataccatgttagaaactgtcgttggacctaactcaaccccacaaaactggcttgtga 12325609  T
Q  207 ggtgag 212  Q
    ||||||    
T  12325610 ggtgag 12325615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 26603445 - 26603400
Alignment:
Q  224 tttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    |||||||||||||||||||| |||||  ||||||||||||||||||    
T  26603445 tttataaacatattgtcagaccatctcctattcgatgtgagactct 26603400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 269
Target Start/End: Original strand, 42586438 - 42586550
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttatt 255  Q
    |||||||||||||||||||| ||||| ||||   |||||| ||||||| ||||||||  | |  |||| ||||| ||| ||||||||  ||||| ||||     
T  42586438 tcttagaaatcgtggttgggcctaacacaaccccacaaaattggcttgtgaggtgag-gattgccccacttatatacacattgtcaggccatctcttatc 42586536  T
Q  256 cgatgtgagactct 269  Q
    ||||||||||||||    
T  42586537 cgatgtgagactct 42586550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 211
Target Start/End: Complemental strand, 3169927 - 3169796
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||  |||||| |||||| ||||||||| ||| ||||||| | || | ||| || ||||  |||| |||| || |||||||||||||||||| ||    
T  3169927 cataaatgacgggtggcccgataacggaaacctgataacaggtggcctaaagaatcgtgaaggaa-ctctgataccatattagaaatcgtggttgggcct 3169829  T
Q  179 aactcaactatacaaaactggcttgcgaggtga 211  Q
    ||| ||||   ||||||| |||||| |||||||    
T  3169828 aacacaaccccacaaaaccggcttgtgaggtga 3169796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 7307882 - 7307842
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcag 119  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  7307882 cataaatggtgggtggtccaatagcggaaacctgatagcag 7307842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 25255397 - 25255338
Alignment:
Q  155 atcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaa 214  Q
    ||||||||||||||||||||| ||||| ||||   ||||||| |||||| ||||||||||    
T  25255397 atcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgagaa 25255338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 247
Target Start/End: Original strand, 8870867 - 8871000
Alignment:
Q  113 atagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||||||||||| |||| |||| |||||| || |||| |||| ||||||||||| ||||||||  ||||| ||||   ||||||  |||||  ||||||||    
T  8870867 atagcaggtggcccaatggatattggag-agactctgataccatcttagaaatggtggttggacctaacacaaccccacaaaaacggcttatgaggtgag 8870965  T
Q  213 aaaatcacccatttataaacatattgtcagatcat 247  Q
    ||   | || | ||||||||| |||||||||||||    
T  8870966 aattgccccaacttataaacacattgtcagatcat 8871000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 11925000 - 11924914
Alignment:
Q  162 aaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatc 248  Q
    |||||||||||||| ||||| ||||   ||||||| || |||  ||||||||||  | |||| ||||||||||||||||||| ||||    
T  11925000 aaatcgtggttgggcctaacacaacctcacaaaaccggtttgtaaggtgagaaatacccccacttataaacatattgtcagaccatc 11924914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 25713479 - 25713365
Alignment:
Q  155 atcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttat 254  Q
    ||||||||||| |||||| || ||||| |||||  |||||||||||||| |||||||  |   | |||| ||||||||| ||||||||| ||||   |||    
T  25713479 atcttagaaatggtggttaggcctaacacaactccacaaaactggcttgtgaggtgacgattgcccccacttataaacacattgtcagaccatcacctat 25713380  T
Q  255 tcgatgtgagactct 269  Q
     ||||||| ||||||    
T  25713379 ccgatgtgggactct 25713365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 17468365 - 17468316
Alignment:
Q  220 cccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    |||| ||||||||||||||||||| ||||| |||| ||||||| ||||||    
T  17468365 cccacttataaacatattgtcagaccatctcttatccgatgtgggactct 17468316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 36273136 - 36273095
Alignment:
Q  139 aggaggctctaatacgatcttagaaatcgtggttgggtctaa 180  Q
    ||||| ||||||||| |||||||||||||||||| |||||||    
T  36273136 aggagactctaataccatcttagaaatcgtggttaggtctaa 36273095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 9499403 - 9499300
Alignment:
Q  82 aaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaac 181  Q
    |||||||||||||||| ||| | |||||||| || || ||||||||| ||| ||| || ||| |||| |||  || |||||||||||||||| ||| |||    
T  9499403 aaatggtgggtggtccaataacagaaacctactaacaagtggtccaatgga-ctttgaagagactctgatatcattttagaaatcgtggttgagtcgaac 9499305  T
Q  182 tcaac 186  Q
     ||||    
T  9499304 acaac 9499300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 40316037 - 40316105
Alignment:
Q  144 gctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgag 212  Q
    |||||||||| || ||||||||||||||||| |||||| ||||   ||||||| |||||  ||||||||    
T  40316037 gctctaataccatgttagaaatcgtggttggatctaacacaacctcacaaaaccggcttatgaggtgag 40316105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 79 - 269
Target Start/End: Original strand, 5677 - 5866
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  ||| |||||||||| |||||||| |||| ||||||||||||||||||||| ||    
T  5677 cataaatggtgggtggtccgatagcggaaacctgatagcaggtggctcaatggatcttgga-gaggctctgataccatcttagaaatcgtggttgggcct 5775  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
    ||| ||||    |||||| |||||| ||| |||| |   | |||| ||||||||| |||||||||  || | |||| ||||||| ||||||    
T  5776 aacacaaccccgcaaaaccggcttgtgagatgaggattgcccccacttataaacacattgtcagactatgtcttatccgatgtgggactct 5866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 4e-32; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 20301422 - 20301293
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| || |||||||| |||| ||||||||||||||||||||| ||    
T  20301422 cataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatctt-gaagaggctctgataccatcttagaaatcgtggttgggcct 20301324  T
Q  179 aactcaactatacaaaactggcttgcgaggt 209  Q
    ||| ||||   ||||||| |||||| |||||    
T  20301323 aacacaacctcacaaaacgggcttgtgaggt 20301293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 21088054 - 21087925
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| || |||||||| |||| ||||||||||||||||||||| ||    
T  21088054 cataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatctt-gaagaggctctgataccatcttagaaatcgtggttgggcct 21087956  T
Q  179 aactcaactatacaaaactggcttgcgaggt 209  Q
    ||| ||||   ||||||| |||||| |||||    
T  21087955 aacacaacctcacaaaacgggcttgtgaggt 21087925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 31197775 - 31197642
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||| ||| |||||||| |||| |||||||||||| |||||||| ||    
T  31197775 cataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatctcgga-gaggctctgataccatcttagaaatc-tggttgggcct 31197678  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaa 214  Q
    ||| ||||  |||||||| | |||  ||||||||||    
T  31197677 aacacaaccctacaaaaccgacttttgaggtgagaa 31197642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 79 - 242
Target Start/End: Original strand, 39052852 - 39053014
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| | |||||||||||||| |||||||| || | || ||||||||||| |||||||||||| |||||||||||||| |||||| ||    
T  39052852 cataaatggtgggtggccggatagcggaaacctgatagcagggggccaaatggatcttggag-aggctctaataccatcttagaaatcgttgttgggcct 39052950  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    ||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| ||||||||    
T  39052951 aacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 39053014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 79 - 212
Target Start/End: Complemental strand, 8084288 - 8084156
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||||| ||| |||||| |||||| |||||| |||| |||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  8084288 cataaatggtgggtgatccaatagcgaaaacctgatagcatgtggcccaatggatcttggag-aggctctgataccatcttagaaatcgtggttgggtct 8084190  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| |||||   ||||||  ||||| ||||||||    
T  8084189 aacacaactccgcaaaaccagcttgtgaggtgag 8084156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 41790825 - 41790713
Alignment:
Q  73 catggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggtt 172  Q
    ||||| ||||||||||||||||  ||||||||||||||| ||||||||||| |||| ||||||| || |||||||| |||| ||||||||||||||||||    
T  41790825 catggacataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatggatctt-gaagaggctctgataccatcttagaaatcgtggtt 41790727  T
Q  173 gggtctaactcaac 186  Q
    ||| ||||| ||||    
T  41790726 gggcctaacacaac 41790713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 87 - 269
Target Start/End: Original strand, 24532352 - 24532533
Alignment:
Q  87 gtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaac 186  Q
    |||||||| |||||||||||||||| ||||||||||| |||| |||||||| ||| |||||| |||| |||||||||||| |||||||| ||||| ||||    
T  24532352 gtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttgaagg-ggctctgataccatcttagaaatcatggttgggcctaacacaac 24532450  T
Q  187 tatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactct 269  Q
       ||||||| |||||| |||||||  |   | |||| ||||||||| ||||||||  |||||  ||| ||||||| ||||||    
T  24532451 cccacaaaaccggcttgtgaggtgatgattgcccccacttataaacacattgtcaggccatctcctatccgatgtgggactct 24532533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 5932107 - 5932239
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| |||||| ||||||| | |||| ||||||||||| |||||||||| |||||||| |||| |||||| |||| ||||||||| ||    
T  5932107 cataaatggtgggtggcccgataacggaaacgtgatagtaggtggtccaatggatcttgga-gaggctctgataccatcttaaaaatggtggttgggcct 5932205  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||||   ||||||| |||||| ||||||||    
T  5932206 aacacaaccccacaaaacaggcttgtgaggtgag 5932239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 79 - 243
Target Start/End: Original strand, 11232352 - 11232515
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||   ||||||||||||||| ||| ||||||| |||| |||||||||| |||||||| |||| ||||||||||| ||||||||| ||    
T  11232352 cataaatggtgggtgactcgatagcggaaacctgataacaggtggcccaatggatcttgga-gaggctctgataccatcttagaaatggtggttgggcct 11232450  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcaga 243  Q
    ||| ||||   ||||||| ||||||  ||||||| |   | |||| ||||||||| |||||||||    
T  11232451 aacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcaga 11232515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 83 - 212
Target Start/End: Complemental strand, 37001386 - 37001255
Alignment:
Q  83 aatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttg--gaggaggctctaatacgatcttagaaatcgtggttgggtctaa 180  Q
    |||| ||||||| |||||||||||||||| | ||||||||| |||| ||||||||  || |||||||| |||| ||||| ||||||||||||||| ||||    
T  37001386 aatgatgggtggcccgatagcggaaacctgacagcaggtggcccaatggatcttgatgaagaggctctgataccatctttgaaatcgtggttgggcctaa 37001287  T
Q  181 ctcaactatacaaaactggcttgcgaggtgag 212  Q
    | |||||  ||||||| |||||| ||||||||    
T  37001286 cacaactccacaaaaccggcttgtgaggtgag 37001255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 3157482 - 3157614
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||  ||||||||| |||||| |||||||||||||||| |||| ||||| |||||||| |||  |||||| |||| ||||||| | ||    
T  3157482 cataaatggtgggtgtcccgatagcgaaaacctgatagcaggtggtccaatggattttgga-gaggctctgatatcatcttataaatggtggttgagcct 3157580  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||||   |||||||||||||| ||||||||    
T  3157581 aacacaaccccacaaaactggcttgtgaggtgag 3157614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 79 - 210
Target Start/End: Complemental strand, 12688233 - 12688103
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| || ||||  ||||||| ||||||||||| |||| ||||||| || ||||||||||||  ||||||||||||||| ||| ||||    
T  12688233 cataaatggtgggtggcccaatagaagaaacctgatagcaggtggcccaatggatctt-gaagaggctctaatatcatcttagaaatcgtgtttgagtct 12688135  T
Q  179 aactcaactatacaaaactggcttgcgaggtg 210  Q
    |||  ||||  ||||||| |||||| ||||||    
T  12688134 aacataactccacaaaaccggcttgtgaggtg 12688103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 18004252 - 18004332
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatctta 160  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| |||| |||||||||| |||||||| |||| ||||||    
T  18004252 cataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttgga-gaggctctgataccatctta 18004332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 186
Target Start/End: Original strand, 28213020 - 28213133
Alignment:
Q  73 catggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggtt 172  Q
    ||||| ||||| ||||||| ||| |||||  | |||||| ||||||||||| ||||| |||||||||||||| ||| |||| || |||||||||||||||    
T  28213020 catggacataagtggtgggcggttcgataatgaaaacctgatagcaggtggcccaacagatcttggaggaggatctgataccatattagaaatcgtggtt 28213119  T
Q  173 gggtctaactcaac 186  Q
    ||| ||||| ||||    
T  28213120 gggcctaacacaac 28213133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 35682939 - 35683000
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggag 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||    
T  35682939 cataaatggtgggtggcccgatagcggaaacctaatagcaggtggcccaatggatcttggag 35683000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 80 - 202
Target Start/End: Original strand, 26208172 - 26208294
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtcta 179  Q
    ||||||||||||||| ||| ||| | |||||| ||||||||||| |||||||||||| ||| ||||||| |||| ||||||||||| |||| |||  |||    
T  26208172 ataaatggtgggtggcccgttagggaaaacctgatagcaggtggcccaacggatcttagagaaggctctgataccatcttagaaattgtggatggaccta 26208271  T
Q  180 actcaactatacaaaactggctt 202  Q
    || ||||   | |||||||||||    
T  26208272 acacaaccccataaaactggctt 26208294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 36917362 - 36917455
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttg 173  Q
    |||||||||||| |||||||||| ||||||||||||||  |||| | ||| |||||||||| |||||||| |||| ||||||||||| |||||||    
T  36917362 cataaatggtggatggtccgataacggaaacctaatagtgggtgattcaatggatcttgga-gaggctctgataccatcttagaaatggtggttg 36917455  T

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Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 37868506 - 37868638
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| || ||||||||||| | ||||| ||||| |||| |||||||||| |||||| | |||| |||||| ||||||||||| || ||    
T  37868506 cataaatggtgggtggcccaatagcggaaacttgatagcgggtggcccaatggatcttgga-gaggctatgataccatcttaaaaatcgtggttaggcct 37868604  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||| |  |||||||  ||||| ||||||||    
T  37868605 aacacaattccacaaaaccagcttgtgaggtgag 37868638  T

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Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 262
Target Start/End: Original strand, 4873597 - 4873795
Alignment:
Q  62 gacatttggagcatggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttag 161  Q
    |||||||||||||||| ||||||||||||||| ||| ||| ||||||||| ||||||| ||| |||||  || |||||  ||||| | |||  |||| ||    
T  4873597 gacatttggagcatggacataaatggtgggtgatccaataacggaaacctgatagcagctggcccaacaaattttgga-aaggctttgataacatctgag 4873695  T
Q  162 aaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgt 261  Q
    |||| ||||||||| ||||    || | ||||||| |||||| |||||||| || |  | || ||||||||| |||||||| |||||| |||| ||||||    
T  4873696 aaattgtggttgggcctaataagacaacacaaaaccggcttgtgaggtgag-aattgccacacttataaacacattgtcaggtcatctcttatccgatgt 4873794  T

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Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 15042807 - 15042915
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggag-gaggctctaatacgatcttagaaatcgtggttgggtc 177  Q
    |||||| ||||||||| | |||||||||||||| ||||||||||| |||| | ||||||||| |||||| | |||  |||||||||||||||||| || |    
T  15042807 cataaacggtgggtggcctgatagcggaaacctgatagcaggtggcccaatgaatcttggagagaggctatgataacatcttagaaatcgtggttaggcc 15042906  T
Q  178 taactcaac 186  Q
    |||| ||||    
T  15042907 taacacaac 15042915  T

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Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 12317207 - 12317106
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||| |||||||||||||| ||||||||| ||| ||||||| |||| | ||| | || ||| |||| |||| ||||||||||||||||||||| ||    
T  12317207 cataaatgatgggtggtccgataacggaaacctgataacaggtggcccaaagaatcgt-gaagagtctctgataccatcttagaaatcgtggttgggcct 12317109  T
Q  179 aac 181  Q
    |||    
T  12317108 aac 12317106  T

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Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 82 - 175
Target Start/End: Original strand, 422379 - 422471
Alignment:
Q  82 aaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttggg 175  Q
    ||||||||||||| |||| ||||||||||| ||||||||||| ||||| |||||||    ||||||| |||| ||||||||||| |||||||||    
T  422379 aaatggtgggtggcccgagagcggaaacctgatagcaggtggcccaac-gatcttgttttaggctctgataccatcttagaaattgtggttggg 422471  T

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Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 80 - 177
Target Start/End: Original strand, 8466647 - 8466744
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtc 177  Q
    |||||||||||||||   |||||||||||||| ||||||||||| |||| |||||||| |  | ||| | |||| ||||||||||| |||||||||||    
T  8466647 ataaatggtgggtggcttgatagcggaaacctgatagcaggtggcccaatggatcttgaaccaagctttgataccatcttagaaattgtggttgggtc 8466744  T

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Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 186
Target Start/End: Complemental strand, 8716276 - 8716169
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||| ||||  ||||||||||||||||||||||| |||   ||| |||||||   | ||||||| |||| || ||||||||| |||||||||||    
T  8716276 cataaatggtcggtgacccgatagcggaaacctaatagcatgtgactcaatggatcttaacgaaggctctgataccatattagaaatcttggttgggtct 8716177  T
Q  179 aactcaac 186  Q
    ||| ||||    
T  8716176 aacacaac 8716169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 7669580 - 7669522
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttg 137  Q
    |||||||||||||||||||||||| |||||||| |||||||||||  ||| ||||||||    
T  7669580 cataaatggtgggtggtccgatagtggaaacctgatagcaggtggctcaatggatcttg 7669522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 3157167 - 3157216
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaa 128  Q
    |||||||||||||||  |||||||||||||||| ||||||||||||||||    
T  3157167 cataaatggtgggtgtcccgatagcggaaacctgatagcaggtggtccaa 3157216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 10615538 - 10615470
Alignment:
Q  96 ccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaat 165  Q
    |||||||||||||||| ||| |||||||| ||| |||||||||| |||||||| |||| |||||||||||    
T  10615538 ccgatagcggaaacctgatatcaggtggtacaatggatcttgga-gaggctctgataccatcttagaaat 10615470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 212
Target Start/End: Complemental strand, 16050190 - 16050058
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||  |||||| |||||| |||||| || ||| ||||||| |||| | ||| || || ||||||| |||| || |||||| ||||||||||||||    
T  16050190 cataaatgacgggtggcccgataacggaaatctgataacaggtggcccaaagaatcgtgaag-aggctctgataccatattagaagtcgtggttgggtct 16050092  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||||   ||||||||| |||| ||||||||    
T  16050091 aacacaaccccacaaaactgacttgtgaggtgag 16050058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 242
Target Start/End: Original strand, 19256753 - 19256905
Alignment:
Q  89 gggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaacta 188  Q
    |||||| |||||| ||||||||| ||| ||||||| |||| | ||| || || ||||||| |||| || |||||||||||||||||| ||||| ||||      
T  19256753 gggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaag-aggctctgataccatattagaaatcgtggttgggcctaacacaaccc 19256851  T
Q  189 tacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
     |||||||  ||||| |||||||| |   | |||| ||||||||| ||||||||    
T  19256852 cacaaaacctgcttgtgaggtgaggattgcccccacttataaacaaattgtcag 19256905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 260
Target Start/End: Original strand, 20094718 - 20094897
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||| | ||||||| |||||| |||| |||||| |||| ||||||| || ||  |||| |||| | |||| |||||||||||||| ||    
T  20094718 cataaatggtgggtggcctgatagcgaaaacctgataggaggtggcccaatggatctt-gaagaaactctgataccaacttataaatcgtggttgggcct 20094816  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatg 260  Q
    ||  ||||   ||||||| ||||||  ||||||| |   | ||||  |||||||||||||| ||| |||||||||| |||||    
T  20094817 aa-acaaccccacaaaaccggcttgtaaggtgaggattgcccccacatataaacatattgtaagaccatcttttatccgatg 20094897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 38476159 - 38476098
Alignment:
Q  120 gtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaac 181  Q
    |||| |||| ||||||||||||||||||| |||| ||||||||||| ||||||||| |||||    
T  38476159 gtggcccaatggatcttggaggaggctctgataccatcttagaaattgtggttgggcctaac 38476098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 38475875 - 38475776
Alignment:
Q  113 atagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||||||||||| |  ||||| |||||| | ||| ||||||| ||||||||| | ||||||||| ||||| ||||  |||||||| |||||| ||||||||    
T  38475875 atagcaggtggccatacggaccttggaagtggccctaataccatcttagaatttgtggttgggcctaacacaaccctacaaaaccggcttgtgaggtgag 38475776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 242
Target Start/End: Original strand, 11232158 - 11232279
Alignment:
Q  120 gtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatca 219  Q
    |||| |||| ||||||||||| ||||||| |||| ||||||||||| ||||||||| ||||| ||||   ||||||| ||||||  ||||||| |   |     
T  11232158 gtggcccaatggatcttggag-aggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcc 11232256  T
Q  220 cccatttataaacatattgtcag 242  Q
    |||| ||||||||| ||||||||    
T  11232257 cccacttataaacacattgtcag 11232279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 35682780 - 35682866
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    |||||||||||||||||||| ||||| ||||   ||||||| ||||||||||||||| |   | |||| ||||||||| ||||||||    
T  35682780 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgcgaggtgaggattgcccccacttataaacacattgtcag 35682866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 212
Target Start/End: Complemental strand, 4828229 - 4828097
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||  || ||| |||||| ||||||||| ||| ||||||| |||| | ||| || || ||||||| |||| || ||||| |||||||||||| ||    
T  4828229 cataaatgacggatggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaag-aggctctgataccatattagagatcgtggttgggcct 4828131  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| ||||   ||||||| |||||| ||||||||    
T  4828130 aacacaaccccacaaaaccggcttgtgaggtgag 4828097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 39052695 - 39052756
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggag 140  Q
    |||||||||||||||| | |||||||||||||| ||||||||||| | ||  ||||||||||    
T  39052695 cataaatggtgggtggccggatagcggaaacctgatagcaggtggccaaattgatcttggag 39052756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 29005967 - 29005919
Alignment:
Q  138 gaggaggctctaatacgatcttagaaatcgtggttgggtctaactcaac 186  Q
    |||||| |||||||||  |||||||||||||||||||||||||| ||||    
T  29005967 gaggagactctaataccgtcttagaaatcgtggttgggtctaacacaac 29005919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 10614865 - 10614955
Alignment:
Q  82 aaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttg 173  Q
    ||||||||| || |||||||||  |||| | || ||||||||||||| |||||||||| |||||| | |||  |||||| ||||||||||||    
T  10614865 aaatggtggatgttccgatagcaaaaacttgattgcaggtggtccaatggatcttgga-gaggctatgatatcatcttataaatcgtggttg 10614955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 25325731 - 25325648
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgt 239  Q
    |||||||||||||||||||| ||||  |||||  |||||||||||||| |||| ||| |   |||||| ||||||||| |||||    
T  25325731 tcttagaaatcgtggttgggcctaaaacaactccacaaaactggcttgtgaggagaggattgcacccacttataaacacattgt 25325648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 29907869 - 29907920
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacg 130  Q
    |||||||||||||||| |||||| || |||||| ||||||||||| ||||||    
T  29907869 cataaatggtgggtggaccgataacgaaaacctgatagcaggtggcccaacg 29907920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 166
Target Start/End: Original strand, 31079498 - 31079584
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatc 166  Q
    |||||||||||||||| ||||||| ||||| || ||| || ||||||||| |||||||| | |||| | | |||| ||||||||||||    
T  31079498 cataaatggtgggtggcccgatagtggaaatctgataacatgtggtccaatggatcttgta-gaggttttgataccatcttagaaatc 31079584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 42049644 - 42049702
Alignment:
Q  114 tagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggtt 172  Q
    ||||||| || |||||||||||| ||||||| ||| || | ||||||||||||||||||    
T  42049644 tagcaggcggcccaacggatctttgaggaggttctgatgccatcttagaaatcgtggtt 42049702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 7267466 - 7267519
Alignment:
Q  158 ttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtga 211  Q
    |||||||| ||||||||||||||| ||||  |||||||| |||||| |||||||    
T  7267466 ttagaaatggtggttgggtctaacacaaccctacaaaaccggcttgtgaggtga 7267519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 17469918 - 17469817
Alignment:
Q  141 gaggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtc 240  Q
    |||||||| |||| || |||||||||||||||| | ||||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| ||||||    
T  17469918 gaggctctgataccatattagaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtc 17469819  T
Q  241 ag 242  Q
    ||    
T  17469818 ag 17469817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 27439463 - 27439512
Alignment:
Q  62 gacatttggagcatggtcataaatggtgggtggtccgatagcggaaacct 111  Q
    |||||||||||||||| ||||||||||||| ||  ||||| |||||||||    
T  27439463 gacatttggagcatggacataaatggtgggaggctcgataacggaaacct 27439512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 7289358 - 7289402
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtgg 123  Q
    |||||||||||||||||  ||||||| |||||| |||||||||||    
T  7289358 cataaatggtgggtggtttgatagcgaaaacctgatagcaggtgg 7289402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 10615798 - 10615699
Alignment:
Q  73 catggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggtt 172  Q
    ||||| || ||||||| | |||| |||||||| |||| | ||||||||||||  || ||||||| || |||| |||||||  |||||||||| |||||||    
T  10615798 catggacacaaatggtagatggttcgatagcgaaaacgtgatagcaggtggtttaatggatcttaga-gaggttctaatatcatcttagaaaccgtggtt 10615700  T

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Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 10884161 - 10884094
Alignment:
Q  144 gctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||||| |||| ||||||||||||||||||||| ||||| ||||   ||||||| |||||| ||||||||    
T  10884161 gctctgataccatcttagaaatcgtggttgggcctaacacaac-ccacaaaaccggcttgtgaggtgag 10884094  T

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Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 19256587 - 19256671
Alignment:
Q  158 ttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcag 242  Q
    |||||||||||||||||| ||||| ||||   ||||||| |||||| |||||||| |   | |||| ||||||||| ||||||||    
T  19256587 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 19256671  T

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Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 39960118 - 39960074
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtgg 123  Q
    |||||||||||||| |  ||||||||||||||| |||||||||||    
T  39960118 cataaatggtgggtagctcgatagcggaaacctgatagcaggtgg 39960074  T

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Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 39960277 - 39960221
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgag 212  Q
    |||||||||||||||||||| ||||| ||||   ||||||| |||||| ||||||||    
T  39960277 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgag 39960221  T

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Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 39984865 - 39984777
Alignment:
Q  190 acaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagactc-taacggttt 277  Q
    |||||||||||||| |||||||| |   | |||| ||||||||| ||||||||| || ||  || |||||||||||||| |||||||||    
T  39984865 acaaaactggcttgtgaggtgaggattgcccccacttataaacaaattgtcagaccaactcctaatcgatgtgagactcttaacggttt 39984777  T

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Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 42846604 - 42846660
Alignment:
Q  156 tcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtgag 212  Q
    |||||||||||||||||||| ||||| ||||   ||||||| |||||| ||||||||    
T  42846604 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgag 42846660  T

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Target: scaffold0519 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 79 - 243
Target Start/End: Complemental strand, 2077 - 1914
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||||||||   ||||||||||||||| ||| ||||||| |||| |||||||||| |||||||| |||| ||||||||||| ||||||||| ||    
T  2077 cataaatggtgggtgactcgatagcggaaacctgataacaggtggcccaatggatcttgga-gaggctctgataccatcttagaaatggtggttgggcct 1979  T
Q  179 aactcaactatacaaaactggcttgcgaggtgagaaaatcacccatttataaacatattgtcaga 243  Q
    ||| ||||   ||||||| ||||||  ||||||| |   | |||| ||||||||| |||||||||    
T  1978 aacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcaga 1914  T

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Target: scaffold0129 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 211
Target Start/End: Complemental strand, 14464 - 14333
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||||||| ||||| |||||||||||||||| ||| ||  ||| |||| |||||||||| |||||||| |||| |||||||||| |||||||||| ||    
T  14464 cataaatggtaggtggcccgatagcggaaacctgataacatatggcccaatggatcttgga-gaggctctgataccatcttagaaaacgtggttgggcct 14366  T
Q  179 aactcaactatacaaaactggcttgcgaggtga 211  Q
    ||| ||||   ||||||| |||||| |||||||    
T  14365 aacacaaccccacaaaaccggcttgtgaggtga 14333  T

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Target: scaffold0092 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 203
Target Start/End: Complemental strand, 5816 - 5693
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    |||||| |||||||| | ||||| ||||||||| ||||||||||| |||| |||| ||| || ||||||| |||| ||||||||||||||||||||||||    
T  5816 cataaacggtgggtgattcgataacggaaacctgatagcaggtggcccaatggattttgaag-aggctctgataccatcttagaaatcgtggttgggtct 5718  T
Q  179 aactcaactatacaaaactggcttg 203  Q
    ||| ||||   ||||||| ||||||    
T  5717 aacacaaccccacaaaaccggcttg 5693  T

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Target: scaffold0400 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 212
Target Start/End: Complemental strand, 4003 - 3874
Alignment:
Q  82 aaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaac 181  Q
    ||||| ||||||| |||||||||||||||| ||||||||||| |||  |||||||||| |||| ||| |||| || |||||||| ||||||| | |||||    
T  4003 aaatgatgggtggcccgatagcggaaacctgatagcaggtggcccagtggatcttgga-gaggatctgataccatattagaaattgtggttgtgcctaac 3905  T
Q  182 tcaactatacaaaactggcttgcgaggtgag 212  Q
     ||||   |||||||||||||| ||||||||    
T  3904 acaaccccacaaaactggcttgtgaggtgag 3874  T

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Target: scaffold0365 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 212
Target Start/End: Complemental strand, 4647 - 4518
Alignment:
Q  82 aaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtctaac 181  Q
    ||||| ||||||| |||||||||||||||| ||||||||||| |||  |||||||||| |||| ||| |||| || |||||||| ||||||| | |||||    
T  4647 aaatgatgggtggcccgatagcggaaacctgatagcaggtggcccagtggatcttgga-gaggatctgataccatattagaaattgtggttgtgcctaac 4549  T
Q  182 tcaactatacaaaactggcttgcgaggtgag 212  Q
     ||||   |||||||||||||| ||||||||    
T  4548 acaaccccacaaaactggcttgtgaggtgag 4518  T

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Target: scaffold0048 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 82008 - 81897
Alignment:
Q  73 catggtcataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggtt 172  Q
    ||||| ||||||||||| ||||  |||| | |||||||| ||| ||||| |||||| ||||||||||| ||||||| |||| ||||||||||||||||||    
T  82008 catggacataaatggtgcgtggctcgat-gtggaaacctgataacaggtagtccaatggatcttggag-aggctctgataccatcttagaaatcgtggtt 81911  T
Q  173 gggtctaactcaac 186  Q
    ||| ||||| ||||    
T  81910 gggcctaacacaac 81897  T

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Target: scaffold0045 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 41129 - 41222
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttg 173  Q
    ||||||| ||||||||| |||||||| |||| | ||||||||||| |||| | |||||||| |||||||| |||| |||||||||||||| ||||    
T  41129 cataaatagtgggtggttcgatagcgcaaacttgatagcaggtggcccaatgaatcttgga-gaggctctgataccatcttagaaatcgtagttg 41222  T

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Target: scaffold0047 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 212
Target Start/End: Complemental strand, 12808 - 12676
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||||||||| |||||||||| || ||| |||| |||||| ||||   |||||||| ||| | ||||||| |||||| |||| ||||||||| ||    
T  12808 cataaatggtgggtgttccgatagcgaaatcctgatagtaggtggcccaatttatcttgga-gagacgctaataccatcttaaaaattgtggttgggcct 12710  T
Q  179 aactcaactatacaaaactggcttgcgaggtgag 212  Q
    ||| |||| | ||||||  | |||| ||||||||    
T  12709 aacacaaccacacaaaatcgacttgtgaggtgag 12676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 14572 - 14504
Alignment:
Q  73 catggtcataaatggtgggtggtccgatag-cggaaacctaatagcaggtggtccaacggatcttggag 140  Q
    ||||| ||||||| |||||||  ||||||| ||||||||| |||||||||||||||| |||||||||||    
T  14572 catggacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtccaatggatcttggag 14504  T

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Target: scaffold0366; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 10906 - 10838
Alignment:
Q  73 catggtcataaatggtgggtggtccgatag-cggaaacctaatagcaggtggtccaacggatcttggag 140  Q
    ||||| ||||||| |||||||  || |||| ||||||||| |||||||||||||||| |||||||||||    
T  10906 catggacataaatagtgggtgacccaataggcggaaacctgatagcaggtggtccaatggatcttggag 10838  T

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Target: scaffold0459 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 13265 - 13197
Alignment:
Q  73 catggtcataaatggtgggtggtccgatag-cggaaacctaatagcaggtggtccaacggatcttggag 140  Q
    ||||| ||||||| |||||||  || |||| ||||||||| |||||||||||||||| |||||||||||    
T  13265 catggacataaatagtgggtgacccaataggcggaaacctgatagcaggtggtccaatggatcttggag 13197  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 211
Target Start/End: Complemental strand, 56620 - 56489
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtct 178  Q
    ||||||||  |||||| |||||| || |||||| ||| ||||||| |||| | ||  || || ||||||| |||| || |||||||||||||||||| ||    
T  56620 cataaatgacgggtggcccgataacgaaaacctgataacaggtggcccaaagaattgtgaag-aggctctgataccatattagaaatcgtggttgggcct 56522  T
Q  179 aactcaactatacaaaactggcttgcgaggtga 211  Q
    ||| ||||   ||||||| |||||| |||||||    
T  56521 aacacaaccccacaaaaccggcttgtgaggtga 56489  T

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Target: scaffold0729 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 2655 - 2610
Alignment:
Q  79 cataaatggtgggtggtccgatagcggaaacctaatagcaggtggt 124  Q
    ||||||||| |||||| |||||||||||||||| |||||| |||||    
T  2655 cataaatggggggtggcccgatagcggaaacctgatagcatgtggt 2610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 3456 - 3525
Alignment:
Q  142 aggctctaatacgatcttagaaatcgtggttgggtctaactcaactatacaaaactggcttgcgaggtga 211  Q
    ||||||| |||| || |||||||||||| ||||||||||| ||||   ||||||| |||||| |||||||    
T  3456 aggctctgataccatattagaaatcgtgattgggtctaacacaaccccacaaaaccggcttgtgaggtga 3525  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 177
Target Start/End: Original strand, 102301 - 102397
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaacggatcttggaggaggctctaatacgatcttagaaatcgtggttgggtc 177  Q
    ||||||||||||||  ||||||| |||||||| ||||||||| ||||||  ||| |||||| || |||| |||  |||||| |||| ||| |||||||    
T  102301 ataaatggtgggtgacccgatagtggaaacctgatagcaggt-gtccaatagattttggagaagactctgatatcatcttaaaaattgtgattgggtc 102397  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 87733 - 87781
Alignment:
Q  80 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggtccaa 128  Q
    ||||||||||||||  ||||||| |||||||| ||||||||||| ||||    
T  87733 ataaatggtgggtgacccgatagtggaaacctgatagcaggtggcccaa 87781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 5938 - 5870
Alignment:
Q  199 gcttgcgaggtgagaaaatcacccatttataaacatattgtcagatcatcttttattcgatgtgagact 267  Q
    ||||| ||||||||||   | ||||| |||||| |||||||||||||||||| |||  |||||||||||    
T  5938 gcttgtgaggtgagaattgctcccatatataaatatattgtcagatcatcttctatctgatgtgagact 5870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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