View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21255_high_23 (Length: 272)

Name: NF21255_high_23
Description: NF21255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21255_high_23
NF21255_high_23
[»] chr1 (62 HSPs)
chr1 (1-144)||(37955153-37955296)
chr1 (1-141)||(36269721-36269858)
chr1 (86-144)||(43036286-43036344)
chr1 (1-144)||(41817262-41817402)
chr1 (1-144)||(29092064-29092204)
chr1 (1-144)||(37649579-37649719)
chr1 (81-144)||(33324678-33324741)
chr1 (140-200)||(37955316-37955376)
chr1 (86-144)||(2925898-2925956)
chr1 (86-144)||(27500044-27500102)
chr1 (86-144)||(43571928-43571986)
chr1 (1-144)||(5584483-5584623)
chr1 (87-144)||(19652258-19652315)
chr1 (91-144)||(36385404-36385457)
chr1 (87-144)||(36668612-36668669)
chr1 (86-125)||(34738376-34738415)
chr1 (81-144)||(50476583-50476646)
chr1 (1-64)||(52068177-52068240)
chr1 (86-144)||(896458-896516)
chr1 (86-144)||(17675256-17675314)
chr1 (86-144)||(23871426-23871484)
chr1 (4-144)||(24436895-24437032)
chr1 (86-144)||(32299162-32299220)
chr1 (86-144)||(33991601-33991659)
chr1 (1-133)||(39886898-39887029)
chr1 (86-144)||(41432725-41432783)
chr1 (12-144)||(42162016-42162145)
chr1 (86-144)||(47206387-47206445)
chr1 (86-144)||(47905652-47905710)
chr1 (86-144)||(49102935-49102993)
chr1 (91-144)||(6538023-6538076)
chr1 (91-144)||(7964039-7964092)
chr1 (84-141)||(13255402-13255459)
chr1 (95-144)||(35619477-35619526)
chr1 (1-144)||(41427957-41428096)
chr1 (88-144)||(261849-261905)
chr1 (101-141)||(34552054-34552094)
chr1 (71-115)||(50084169-50084213)
chr1 (81-136)||(5970412-5970467)
chr1 (85-144)||(6015490-6015549)
chr1 (81-144)||(17760448-17760511)
chr1 (91-134)||(28748255-28748298)
chr1 (4-133)||(33643614-33643740)
chr1 (81-144)||(34154301-34154364)
chr1 (81-144)||(38795026-38795089)
chr1 (86-141)||(42488593-42488648)
chr1 (81-144)||(50226085-50226148)
chr1 (86-144)||(2175394-2175452)
chr1 (86-144)||(8156300-8156358)
chr1 (6-56)||(9595558-9595608)
chr1 (86-144)||(14153171-14153229)
chr1 (86-144)||(17688399-17688457)
chr1 (1-63)||(17760516-17760578)
chr1 (86-144)||(20712179-20712237)
chr1 (86-144)||(36325775-36325833)
chr1 (86-144)||(39889621-39889679)
chr1 (95-133)||(42806239-42806277)
chr1 (1-63)||(43036354-43036415)
chr1 (95-144)||(13061360-13061409)
chr1 (4-57)||(23412000-23412053)
chr1 (91-144)||(25561281-25561334)
chr1 (4-64)||(28848829-28848889)
[»] chr5 (42 HSPs)
chr5 (4-144)||(6491165-6491302)
chr5 (91-144)||(2679849-2679902)
chr5 (8-144)||(6373123-6373255)
chr5 (1-144)||(15974318-15974458)
chr5 (1-144)||(35683436-35683576)
chr5 (85-144)||(3081295-3081354)
chr5 (81-144)||(15399871-15399933)
chr5 (86-144)||(2021040-2021098)
chr5 (1-133)||(13569341-13569470)
chr5 (86-144)||(26149663-26149721)
chr5 (1-144)||(10955653-10955793)
chr5 (91-144)||(15770105-15770158)
chr5 (86-142)||(15916943-15916999)
chr5 (81-144)||(1935070-1935133)
chr5 (91-142)||(3676480-3676531)
chr5 (85-144)||(4841672-4841731)
chr5 (81-144)||(5088833-5088896)
chr5 (69-144)||(10295526-10295601)
chr5 (86-144)||(17092957-17093015)
chr5 (80-142)||(17668099-17668161)
chr5 (86-144)||(27480135-27480193)
chr5 (91-133)||(41923223-41923265)
chr5 (91-144)||(9621904-9621957)
chr5 (80-144)||(19389791-19389855)
chr5 (4-64)||(19389858-19389917)
chr5 (1-49)||(21916348-21916396)
chr5 (5-144)||(37508353-37508490)
chr5 (81-144)||(14570013-14570076)
chr5 (86-144)||(33718240-33718299)
chr5 (81-144)||(37909046-37909109)
chr5 (81-144)||(38289368-38289431)
chr5 (86-133)||(43496855-43496902)
chr5 (91-144)||(344101-344152)
chr5 (86-144)||(1658237-1658295)
chr5 (4-58)||(5836869-5836923)
chr5 (1-58)||(3925827-3925883)
chr5 (1-58)||(10843022-10843079)
chr5 (12-144)||(25026911-25027040)
chr5 (91-144)||(38302321-38302374)
chr5 (91-128)||(38568356-38568393)
chr5 (91-144)||(39027804-39027857)
chr5 (89-133)||(39011895-39011939)
[»] chr4 (56 HSPs)
chr4 (4-144)||(46669908-46670045)
chr4 (1-136)||(8827791-8827922)
chr4 (1-144)||(28175427-28175567)
chr4 (80-144)||(28880045-28880109)
chr4 (81-143)||(31428856-31428918)
chr4 (4-144)||(42650617-42650754)
chr4 (1-144)||(12708797-12708937)
chr4 (12-144)||(16535680-16535809)
chr4 (1-144)||(30198734-30198874)
chr4 (91-144)||(40423036-40423089)
chr4 (4-144)||(27143158-27143296)
chr4 (85-144)||(54806529-54806588)
chr4 (86-144)||(21730290-21730348)
chr4 (91-144)||(8828174-8828226)
chr4 (1-136)||(11976815-11976947)
chr4 (91-144)||(32648967-32649020)
chr4 (6-63)||(49936498-49936555)
chr4 (91-144)||(49936567-49936620)
chr4 (91-144)||(52554962-52555015)
chr4 (1-144)||(16318595-16318735)
chr4 (92-144)||(48620355-48620407)
chr4 (1-64)||(35959174-35959237)
chr4 (86-144)||(3126975-3127033)
chr4 (86-144)||(7182154-7182212)
chr4 (4-136)||(9119758-9119885)
chr4 (86-144)||(20533987-20534045)
chr4 (87-141)||(25057628-25057682)
chr4 (86-144)||(32060706-32060764)
chr4 (86-144)||(47669870-47669928)
chr4 (86-144)||(52594589-52594647)
chr4 (91-144)||(13270018-13270071)
chr4 (91-144)||(37756686-37756739)
chr4 (91-144)||(49404586-49404639)
chr4 (91-144)||(52430538-52430591)
chr4 (80-144)||(30765762-30765825)
chr4 (1-56)||(32866779-32866832)
chr4 (92-144)||(41363775-41363827)
chr4 (81-133)||(55509932-55509984)
chr4 (1-64)||(29114273-29114336)
chr4 (86-141)||(32948492-32948547)
chr4 (94-144)||(368125-368175)
chr4 (86-144)||(38317191-38317249)
chr4 (81-130)||(9836749-9836798)
chr4 (91-144)||(17873261-17873314)
chr4 (91-144)||(21296068-21296121)
chr4 (91-144)||(31530084-31530137)
chr4 (91-144)||(43929768-43929821)
chr4 (1-58)||(45823533-45823590)
chr4 (95-144)||(48830777-48830826)
chr4 (91-144)||(49668077-49668130)
chr4 (4-57)||(54205820-54205873)
chr4 (86-134)||(13270248-13270296)
chr4 (86-130)||(24279974-24280018)
chr4 (89-133)||(28710390-28710434)
chr4 (92-144)||(30307435-30307487)
chr4 (1-65)||(44076582-44076645)
[»] chr8 (49 HSPs)
chr8 (5-144)||(43733083-43733219)
chr8 (4-136)||(23702451-23702577)
chr8 (89-144)||(33412171-33412226)
chr8 (4-144)||(1839783-1839920)
chr8 (1-136)||(39193909-39194041)
chr8 (86-144)||(27085408-27085466)
chr8 (12-144)||(2474730-2474858)
chr8 (91-144)||(13865055-13865108)
chr8 (91-144)||(41455324-41455377)
chr8 (84-144)||(3404537-3404597)
chr8 (4-114)||(44879528-44879634)
chr8 (4-114)||(44880287-44880393)
chr8 (85-144)||(16424197-16424256)
chr8 (81-136)||(31149957-31150012)
chr8 (86-144)||(1942016-1942074)
chr8 (86-144)||(34272575-34272633)
chr8 (86-144)||(43007758-43007816)
chr8 (1-133)||(43239648-43239776)
chr8 (91-136)||(6884-6929)
chr8 (91-144)||(32218-32271)
chr8 (1-144)||(23932511-23932661)
chr8 (4-64)||(40985114-40985174)
chr8 (86-133)||(5935228-5935275)
chr8 (85-144)||(8948684-8948743)
chr8 (92-143)||(15108228-15108279)
chr8 (93-136)||(16024544-16024587)
chr8 (6-64)||(79653-79711)
chr8 (86-136)||(12595373-12595423)
chr8 (98-144)||(13537414-13537460)
chr8 (98-144)||(13626962-13627008)
chr8 (86-144)||(29584234-29584292)
chr8 (86-144)||(31297311-31297369)
chr8 (86-144)||(32158825-32158883)
chr8 (86-144)||(36102853-36102911)
chr8 (91-144)||(4873205-4873258)
chr8 (95-144)||(7079957-7080006)
chr8 (91-136)||(9054482-9054527)
chr8 (91-144)||(13227775-13227828)
chr8 (91-144)||(25033445-25033498)
chr8 (91-144)||(29612056-29612109)
chr8 (91-144)||(34336095-34336148)
chr8 (91-144)||(34349780-34349833)
chr8 (4-37)||(39405051-39405084)
chr8 (91-144)||(41866090-41866143)
chr8 (91-144)||(43438267-43438320)
chr8 (4-64)||(28169858-28169918)
chr8 (80-144)||(31305748-31305812)
chr8 (104-144)||(33231010-33231050)
chr8 (92-144)||(34148542-34148594)
[»] chr7 (49 HSPs)
chr7 (3-144)||(13697262-13697398)
chr7 (1-133)||(30080950-30081079)
chr7 (6-133)||(2826221-2826345)
chr7 (1-144)||(42266970-42267109)
chr7 (1-144)||(15748912-15749052)
chr7 (85-144)||(1277997-1278056)
chr7 (81-144)||(33872083-33872146)
chr7 (81-144)||(38505307-38505370)
chr7 (1-144)||(43348202-43348332)
chr7 (91-136)||(23551711-23551756)
chr7 (91-136)||(31891341-31891386)
chr7 (1-136)||(42112930-42113061)
chr7 (1-58)||(43741683-43741740)
chr7 (81-144)||(19644346-19644410)
chr7 (85-144)||(12624337-12624396)
chr7 (93-144)||(38137998-38138049)
chr7 (86-144)||(5968016-5968074)
chr7 (80-142)||(14676284-14676346)
chr7 (86-144)||(41002214-41002272)
chr7 (86-144)||(43188917-43188975)
chr7 (86-144)||(43665132-43665190)
chr7 (91-144)||(23620756-23620809)
chr7 (87-140)||(25522177-25522230)
chr7 (91-144)||(45066788-45066841)
chr7 (1-144)||(17884158-17884294)
chr7 (81-136)||(30081423-30081478)
chr7 (85-144)||(33187810-33187869)
chr7 (1-64)||(38505374-38505437)
chr7 (4-58)||(4788048-4788101)
chr7 (86-144)||(6746542-6746600)
chr7 (1-63)||(6746610-6746672)
chr7 (86-144)||(17818346-17818404)
chr7 (91-145)||(23772501-23772555)
chr7 (86-144)||(25335367-25335425)
chr7 (86-144)||(28437505-28437563)
chr7 (86-144)||(33406595-33406653)
chr7 (86-144)||(35264855-35264913)
chr7 (86-144)||(42620315-42620373)
chr7 (91-133)||(43741402-43741444)
chr7 (91-144)||(13044212-13044265)
chr7 (99-144)||(32650354-32650399)
chr7 (91-144)||(36747360-36747413)
chr7 (1-58)||(45940446-45940503)
chr7 (91-144)||(46449237-46449290)
chr7 (90-144)||(3363674-3363725)
chr7 (108-144)||(36845404-36845440)
chr7 (4-64)||(38137922-38137982)
chr7 (81-133)||(38233710-38233762)
chr7 (89-141)||(38991439-38991491)
[»] chr3 (72 HSPs)
chr3 (4-144)||(32858811-32858948)
chr3 (1-144)||(35283065-35283205)
chr3 (1-144)||(41099691-41099829)
chr3 (1-144)||(50948184-50948324)
chr3 (4-144)||(53888468-53888605)
chr3 (1-144)||(3537186-3537324)
chr3 (91-144)||(40674172-40674225)
chr3 (6-142)||(15499264-15499397)
chr3 (90-144)||(36637864-36637918)
chr3 (82-144)||(39114927-39114989)
chr3 (90-144)||(46175236-46175290)
chr3 (86-144)||(46891446-46891504)
chr3 (86-144)||(48370152-48370210)
chr3 (1-144)||(33944603-33944743)
chr3 (81-144)||(1132898-1132961)
chr3 (1-142)||(1339864-1340001)
chr3 (81-144)||(2420714-2420777)
chr3 (81-144)||(34306653-34306716)
chr3 (81-140)||(47359364-47359423)
chr3 (86-133)||(54126320-54126367)
chr3 (81-144)||(54372539-54372602)
chr3 (86-144)||(7661096-7661154)
chr3 (4-58)||(14271793-14271847)
chr3 (86-144)||(17642649-17642707)
chr3 (86-144)||(19148227-19148285)
chr3 (86-144)||(31178210-31178268)
chr3 (86-144)||(33982702-33982760)
chr3 (81-143)||(37457058-37457120)
chr3 (86-144)||(39499258-39499316)
chr3 (86-144)||(47714636-47714694)
chr3 (86-144)||(47789409-47789467)
chr3 (91-144)||(41961940-41961993)
chr3 (91-144)||(43007485-43007538)
chr3 (91-144)||(44412118-44412171)
chr3 (4-144)||(11500085-11500219)
chr3 (4-64)||(21777676-21777736)
chr3 (81-133)||(33419002-33419054)
chr3 (12-64)||(46017215-46017267)
chr3 (86-142)||(47434285-47434341)
chr3 (81-133)||(49183740-49183792)
chr3 (86-133)||(29623296-29623343)
chr3 (85-144)||(30131849-30131908)
chr3 (1-64)||(38639567-38639630)
chr3 (1-64)||(53664639-53664702)
chr3 (91-133)||(16883410-16883452)
chr3 (86-144)||(23163583-23163641)
chr3 (86-144)||(25428728-25428786)
chr3 (6-64)||(25754142-25754200)
chr3 (86-144)||(27055867-27055925)
chr3 (98-144)||(33900678-33900724)
chr3 (87-133)||(35989167-35989213)
chr3 (90-144)||(38526217-38526271)
chr3 (1-63)||(40118925-40118987)
chr3 (86-144)||(43237350-43237408)
chr3 (86-144)||(49860896-49860954)
chr3 (1-58)||(517678-517734)
chr3 (91-144)||(4247182-4247235)
chr3 (91-144)||(9112700-9112753)
chr3 (1-58)||(22225344-22225401)
chr3 (91-144)||(23420765-23420818)
chr3 (91-144)||(28569487-28569540)
chr3 (91-144)||(30121485-30121538)
chr3 (91-144)||(32708790-32708843)
chr3 (91-144)||(46017270-46017323)
chr3 (4-64)||(1132965-1133025)
chr3 (91-144)||(2927907-2927962)
chr3 (4-64)||(11040868-11040928)
chr3 (96-144)||(13638496-13638544)
chr3 (6-58)||(21835598-21835650)
chr3 (1-49)||(30995848-30995895)
chr3 (6-58)||(31651491-31651543)
chr3 (4-64)||(45570983-45571043)
[»] scaffold0248 (1 HSPs)
scaffold0248 (1-144)||(159-299)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-144)||(1986-2126)
[»] chr2 (64 HSPs)
chr2 (7-144)||(34757589-34757724)
chr2 (1-144)||(11515022-11515162)
chr2 (1-144)||(37194245-37194385)
chr2 (1-144)||(43572507-43572647)
chr2 (1-64)||(4003406-4003469)
chr2 (86-144)||(11522143-11522201)
chr2 (4-136)||(16519060-16519189)
chr2 (86-136)||(16625775-16625825)
chr2 (86-144)||(44953983-44954041)
chr2 (1-144)||(28539389-28539528)
chr2 (95-144)||(43190512-43190561)
chr2 (84-144)||(3119815-3119875)
chr2 (97-144)||(1408936-1408983)
chr2 (1-126)||(21834919-21835041)
chr2 (69-136)||(35412192-35412259)
chr2 (81-144)||(39205072-39205135)
chr2 (86-144)||(4042024-4042082)
chr2 (88-122)||(10264610-10264644)
chr2 (86-144)||(13765902-13765960)
chr2 (86-144)||(18780444-18780502)
chr2 (4-136)||(31584737-31584865)
chr2 (86-144)||(36567241-36567299)
chr2 (91-144)||(3039254-3039307)
chr2 (91-128)||(7486384-7486421)
chr2 (91-144)||(8410893-8410946)
chr2 (91-144)||(31082870-31082923)
chr2 (91-144)||(37217020-37217073)
chr2 (84-144)||(8555739-8555799)
chr2 (4-64)||(30072102-30072161)
chr2 (4-56)||(36030794-36030846)
chr2 (1-64)||(1364811-1364874)
chr2 (89-128)||(7497768-7497807)
chr2 (81-144)||(21626180-21626243)
chr2 (1-64)||(30523225-30523287)
chr2 (6-131)||(40211986-40212108)
chr2 (85-144)||(44656713-44656772)
chr2 (86-144)||(3038910-3038968)
chr2 (4-58)||(5322165-5322219)
chr2 (86-144)||(8990926-8990984)
chr2 (86-144)||(10165473-10165531)
chr2 (98-136)||(11950070-11950108)
chr2 (86-144)||(18826189-18826247)
chr2 (86-144)||(19382937-19382995)
chr2 (86-144)||(31899319-31899377)
chr2 (86-144)||(36030853-36030911)
chr2 (86-144)||(36870303-36870361)
chr2 (86-144)||(38293948-38294006)
chr2 (4-58)||(39819879-39819932)
chr2 (86-144)||(44137195-44137253)
chr2 (91-144)||(9087428-9087481)
chr2 (91-144)||(13767483-13767536)
chr2 (1-58)||(15555392-15555449)
chr2 (81-126)||(16813679-16813724)
chr2 (81-126)||(16852958-16853003)
chr2 (80-133)||(35550132-35550185)
chr2 (91-144)||(40357522-40357575)
chr2 (6-63)||(42644640-42644697)
chr2 (91-144)||(42946687-42946740)
chr2 (84-136)||(1725967-1726019)
chr2 (85-133)||(1802039-1802087)
chr2 (96-144)||(5002750-5002798)
chr2 (92-132)||(6128829-6128869)
chr2 (96-144)||(30523347-30523395)
chr2 (4-64)||(36870244-36870304)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-144)||(29222-29362)
[»] scaffold0051 (3 HSPs)
scaffold0051 (1-144)||(6720-6860)
scaffold0051 (1-144)||(7703-7843)
scaffold0051 (94-144)||(3531-3581)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-144)||(93469-93609)
[»] chr6 (30 HSPs)
chr6 (1-144)||(1567259-1567399)
chr6 (4-144)||(2502329-2502467)
chr6 (89-144)||(19477319-19477374)
chr6 (1-144)||(12779492-12779631)
chr6 (87-144)||(26289612-26289669)
chr6 (91-144)||(31345334-31345387)
chr6 (91-144)||(33212385-33212438)
chr6 (1-144)||(33590292-33590430)
chr6 (91-144)||(33677089-33677141)
chr6 (81-144)||(20820503-20820566)
chr6 (81-144)||(25072494-25072557)
chr6 (69-144)||(26481094-26481169)
chr6 (86-144)||(1029353-1029411)
chr6 (86-144)||(5825392-5825450)
chr6 (86-144)||(24734940-24734998)
chr6 (91-145)||(28551857-28551911)
chr6 (1-141)||(32221981-32222117)
chr6 (91-144)||(20381829-20381882)
chr6 (91-144)||(23095091-23095144)
chr6 (91-144)||(26574358-26574411)
chr6 (86-144)||(4464985-4465044)
chr6 (6-115)||(24874927-24875031)
chr6 (81-136)||(26713908-26713963)
chr6 (1-64)||(32719416-32719479)
chr6 (86-144)||(34914687-34914745)
chr6 (91-144)||(13120385-13120438)
chr6 (6-67)||(18618199-18618260)
chr6 (91-144)||(18618271-18618324)
chr6 (1-58)||(20820576-20820633)
chr6 (104-144)||(34306733-34306773)
[»] scaffold0128 (1 HSPs)
scaffold0128 (6-144)||(26362-26498)
[»] scaffold0263 (1 HSPs)
scaffold0263 (91-144)||(12222-12275)
[»] scaffold0002 (1 HSPs)
scaffold0002 (91-144)||(90848-90901)
[»] scaffold0059 (1 HSPs)
scaffold0059 (86-133)||(17481-17528)
[»] scaffold0388 (1 HSPs)
scaffold0388 (86-144)||(7131-7189)
[»] scaffold0028 (1 HSPs)
scaffold0028 (86-144)||(35418-35476)
[»] scaffold0119 (1 HSPs)
scaffold0119 (71-144)||(37166-37239)
[»] scaffold0991 (1 HSPs)
scaffold0991 (81-133)||(3294-3346)
[»] scaffold0717 (1 HSPs)
scaffold0717 (84-144)||(1636-1696)
[»] scaffold0952 (1 HSPs)
scaffold0952 (86-144)||(3633-3691)
[»] scaffold0648 (1 HSPs)
scaffold0648 (91-144)||(7403-7456)
[»] scaffold0927 (1 HSPs)
scaffold0927 (92-136)||(2881-2925)
[»] scaffold0036 (1 HSPs)
scaffold0036 (4-64)||(82777-82837)


Alignment Details
Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 37955153 - 37955296
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  37955153 ttaatttttcttcataatacaaaattctccttatttgaaagaaataaaacattgtattcgaggaagaaggttttgggaaattttggaggatttatatgaa 37955252  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||||||||| ||||||||| || |||||||    
T  37955253 ttctttaaatttaatcgatgttgatataatatttttaaaattaa 37955296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 36269721 - 36269858
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| ||||||| ||||||||| |||||||| |||||   || ||| |||   |||| |||||||||||||||    
T  36269721 ttaacttttcttcataatacaaaaccctcctcatttgggggaactaaaaaattgtattggaggag--ag-tttcggggggttttggaggatttatatgaa 36269817  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaat 141  Q
    ||||| ||||| |||| |||||| |||||||||||| ||||    
T  36269818 ttcttcaaattcaatctatgttgctataatattcttaaaat 36269858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 43036344 - 43036286
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  43036344 gagggtttatatgaattcttcaaatttaatctatgttgttataatattcttaaaattaa 43036286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 41817402 - 41817262
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||| | ||||||  ||||||||| |||||||| ||||| |    ||||||| | |||| |||| || ||| |||    
T  41817402 ttaacttttcttcataatacaaaaccctcatcatttggaggaactaaaaaattgtattggaggaggg---ttttggggagttttggagggttaataagaa 41817306  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||  |||||||||||||||| || |||||||    
T  41817305 ttcttcaaatttaatttatgttgttataatatttttaaaattaa 41817262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 29092064 - 29092204
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| |||||||| |||| |||   |||||||   |||| |||| || ||| |||    
T  29092064 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggagg-aga--gttttggggggttttggagggttaataagaa 29092160  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||||  || ||||||||||||| || |||||||    
T  29092161 ttctttaaatttaatttatattgttataatatttttaaaattaa 29092204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 37649719 - 37649579
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| ||||||| |||||||||||  ||||| ||||||  ||||||||| |||||||| ||||| |  | ||||||||  |||| |||| || ||| |||    
T  37649719 ttaacttttctttataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagg--gtttttgggag-ttttggagggttaataagaa 37649623  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||  |||||||||||||||| || |||||||    
T  37649622 ttcttcaaatttaatttatgttgttataatatttttaaaattaa 37649579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 33324678 - 33324741
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||| |||| || |||||||    
T  33324678 ttttagagggtttatatgaattcttcaaatttaatcaatgttgttatattatttttaaaattaa 33324741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 37955316 - 37955376
Alignment:
Q  140 attaacttatcattatctaaaaaacgactctttcnnnnnnntgtggaaggttttgtttatt 200  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||    
T  37955316 attaacttatcattatctaaaaaacgactctttcaaaaaaatgtggaaggttttgtttatt 37955376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 2925956 - 2925898
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || |||||||||| ||||||||||||||||||| |||||||    
T  2925956 gagggtttatatgaatttttcaaatttaatctatgttgttataatattcttaaaattaa 2925898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 27500044 - 27500102
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  27500044 gaggatttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 27500102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 43571986 - 43571928
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  43571986 gaggatttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 43571928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 5584483 - 5584623
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| ||||||||   ||| || | |||||||   |||  |||| || ||| |||    
T  5584483 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtatt---ggaggagggttttggggtttttgggagggttaataagaa 5584579  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||  |||||||||||||||| || |||||||    
T  5584580 ttcttcaaatttaatttatgttgttataatatttttaaaattaa 5584623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 19652315 - 19652258
Alignment:
Q  87 aggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||||| | |||||||| || |||||||||||||||| |||||||    
T  19652315 aggatttatatgaattcttcatatttaatctattttgttataatattcttaaaattaa 19652258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 36385404 - 36385457
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||||||||||||||  |||||||||||||||| || |||||||    
T  36385404 tttatatgaattctttaaatttaatttatgttgttataatatttttaaaattaa 36385457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 36668669 - 36668612
Alignment:
Q  87 aggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||||| |||||||| |||| || |||||||||||||||| |||||||    
T  36668669 aggatttatatgaattttttaaattcaatctatattgttataatattcttaaaattaa 36668612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 34738376 - 34738415
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgtt 125  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  34738376 gaggatttatatgaattctttaaatttaatctatgttgtt 34738415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 50476583 - 50476646
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| |||||||||||| ||||| || |||| ||||||||||||||||||| |||||||    
T  50476583 ttttcgagggtttatatgaattttttaatttcaatctatgttgttataatattcttaaaattaa 50476646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 52068240 - 52068177
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||| ||||||||||||||||||| |||||| ||||||  ||||||||| |||||||| |||||    
T  52068240 ttaacttttcttcataatacaaaactctcctcatttggaggaactaaaaaattgtattggagga 52068177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 896516 - 896458
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  896516 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 896458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 17675256 - 17675314
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||| || ||||| |||| |||| |||||||||||||| |||||||    
T  17675256 gaggatttatatgaatttttcaaattcaatctatgtggttataatattcttaaaattaa 17675314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 23871484 - 23871426
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  23871484 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 23871426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 24437032 - 24436895
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattc 103  Q
    ||||||||||| |||| ||||  ||||| ||||||| ||  ||||| |||||||| ||||| |    ||||||  | ||| ||||||||||||||| ||     
T  24437032 atttttcttcaaaatataaaaccctcctcatttgggggagttaaaaaattgtattagaggaggg---ttttggagagtttcagaggatttatatgattta 24436936  T
Q  104 tttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    || |||||||||| |||||||||||||| | || |||||||    
T  24436935 ttcaaatttaatctatgttgttataatacttttaaaattaa 24436895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 32299162 - 32299220
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  32299162 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 32299220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 33991601 - 33991659
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| |||||||  |||| ||||||||||||||||||| |||||||    
T  33991601 gagggtttatatgaattttttaaatcaaatctatgttgttataatattcttaaaattaa 33991659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 39887029 - 39886898
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgg-gagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatga 99  Q
    |||| ||||||||||||||| |||  ||||| |||||| | ||||||||| |||||||| ||  || ||  |||||||   |||| |||  |||||||||    
T  39887029 ttaacttttcttcataatactaaaccctcctcatttggtgggaactaaaaaattgtattgga--aaaaaagttttgggggtttttggagagtttatatga 39886932  T
Q  100 attctttaaatttaatcgatgttgttataatatt 133  Q
    |||||| |||||||||| ||||||||||| ||||    
T  39886931 attcttcaaatttaatctatgttgttatattatt 39886898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 41432783 - 41432725
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| |||||||||| |||||||||| |||| |||||||||||||| |||||||    
T  41432783 gagggtttacatgaattcttcaaatttaatctatgtagttataatattcttaaaattaa 41432725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 42162145 - 42162016
Alignment:
Q  12 tcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattctttaaatt 111  Q
    |||||||| ||||| | ||| ||||||||||||| ||| ||||| || ||||| ||   |||||||   || | |||| |||||||||||| || |||||    
T  42162145 tcataataaaaaatccccctcatttgggagaactcaaatattgtgttggaggagga---ttttggggggttatggagggtttatatgaatttttcaaatt 42162049  T
Q  112 taatcgatgttgttataatattctttaaattaa 144  Q
     |||| |||||||||||||||| || |||||||    
T  42162048 caatctatgttgttataatatttttaaaattaa 42162016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 47206445 - 47206387
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  47206445 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 47206387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 47905710 - 47905652
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  47905710 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 47905652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 49102993 - 49102935
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||||||||||| |||||||||  |||||| |||||||||||| |||||||    
T  49102993 gagggtttatatgaattcttcaaatttaatatatgttgctataatattcttaaaattaa 49102935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 6538023 - 6538076
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||| |||| |||||||||  ||||||||||||||||||| |||||||    
T  6538023 tttatatgaactcttcaaatttaatatatgttgttataatattcttaaaattaa 6538076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 7964039 - 7964092
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  7964039 tttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 7964092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 141
Target Start/End: Original strand, 13255402 - 13255459
Alignment:
Q  84 tagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaat 141  Q
    |||||| |||||||||||| || ||||| |||| ||||||||||||||||||| ||||    
T  13255402 tagagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaat 13255459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 35619526 - 35619477
Alignment:
Q  95 tatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||| |||||||||  ||||||||||||||||||| |||||||    
T  35619526 tatgaattcttcaaatttaatatatgttgttataatattcttaaaattaa 35619477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 41428096 - 41427957
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    ||||||||||||||||||  || | |||||| ||||||| ||||| ||| ||| |||| ||||| ||   |||||||  ||||| || | ||||| | ||    
T  41428096 ttaatttttcttcataatgaaagaatctcctcatttggg-gaactcaaaaattatattggaggagga---ttttgggggattttggaaggtttatgtaaa 41428001  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| ||||||| || || |||||||||||||||| |||||||    
T  41428000 ttcttcaaatttattctatattgttataatattcttaaaattaa 41427957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 261849 - 261905
Alignment:
Q  88 ggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||| |||||| |||||||| |||| |||||||||||| |||||| |||||||    
T  261849 ggatttatctgaattttttaaattcaatccatgttgttataaaattcttaaaattaa 261905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 34552094 - 34552054
Alignment:
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaat 141  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  34552094 ttctttaaatttaatctatgttgttataatattcttaaaat 34552054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 50084169 - 50084213
Alignment:
Q  71 ttttgggaaattttagaggatttatatgaattctttaaatttaat 115  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||||    
T  50084169 ttttggggaatttgagaggatttatatcaattctttaaatttaat 50084213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 5970467 - 5970412
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctt 136  Q
    |||| |||| ||||||||||||||| ||||||| || || ||||||||||||||||    
T  5970467 tttttgagggtttatatgaattcttcaaatttattctatattgttataatattctt 5970412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 144
Target Start/End: Original strand, 6015490 - 6015549
Alignment:
Q  85 agaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| ||||||||||||||| |||||||||  ||||||||||| ||||| | |||||||    
T  6015490 agagggtttatatgaattcttcaaatttaatatatgttgttatagtattcgtaaaattaa 6015549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 17760511 - 17760448
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| || ||| |||||||| |||||||||| |||||||||||||||| || |||||||    
T  17760511 ttttggagggttaataagaattcttcaaatttaatctatgttgttataatatttttaaaattaa 17760448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 28748255 - 28748298
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattc 134  Q
    |||||||||||| |||||||| |||| |||||||||||||||||    
T  28748255 tttatatgaattttttaaattcaatctatgttgttataatattc 28748298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 33643614 - 33643740
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattc 103  Q
    ||||||||||||||||||| |||||||||||||||  || || |||  || ||||   ||  || | ||||||||| ||||||||| |||| || |||||    
T  33643614 atttttcttcataatacaatattctccttatttggaggatctcaaaagttatatt---ggcggagggttttgggaagttttagagggtttacataaattc 33643710  T
Q  104 tttaaatttaatcgatgttgttataatatt 133  Q
    || |||||||||  |||| || ||||||||    
T  33643711 ttcaaatttaatttatgtagtgataatatt 33643740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 34154364 - 34154301
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| || ||| ||||||||||||||||||  |||||||||||||||| || |||||||    
T  34154364 ttttggagggttaataagaattctttaaatttaatttatgttgttataatatttttaaaattaa 34154301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 38795026 - 38795089
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| |||||||||||| || || || |||| ||||||||||||||||||| |||||||    
T  38795026 ttttggagggtttatatgaatttttcaatttcaatctatgttgttataatattcttaaaattaa 38795089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 42488648 - 42488593
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaat 141  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| ||||    
T  42488648 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaat 42488593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 50226085 - 50226148
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| |||||||||||||||  ||||||||| ||||||||||| |||| || |||||||    
T  50226085 tttttgagggtttatatgaattcttctaatttaatctatgttgttatattatttttaaaattaa 50226148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 2175394 - 2175452
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||| |||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  2175394 gagggtttgtatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 2175452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 8156358 - 8156300
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||| |||| || ||||| |||| ||||||||||||||||||| |||||||    
T  8156358 gagggtttatatcaatttttcaaattcaatctatgttgttataatattcttaaaattaa 8156300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 9595558 - 9595608
Alignment:
Q  6 ttttcttcataatacaaaattctccttatttgggagaactaaaacattgta 56  Q
    |||||||||||||||||||| | ||| ||||||| ||||||||| ||||||    
T  9595558 ttttcttcataatacaaaatccccctaatttgggggaactaaaaaattgta 9595608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 14153171 - 14153229
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||| |||| || ||||| |||| ||||||||||||||||||| |||||||    
T  14153171 gagggtttatattaatttttcaaattcaatctatgttgttataatattcttaaaattaa 14153229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 17688399 - 17688457
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||  ||||||||||||||||||| |||||||    
T  17688399 gagggtttatatgaatttttcaaattcaatatatgttgttataatattcttaaaattaa 17688457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 17760578 - 17760516
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagg 63  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| |||||||| ||||    
T  17760578 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggagg 17760516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 20712237 - 20712179
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||| ||||||| ||||| |||| |||||||||||||||| || |||||||    
T  20712237 gagggtttatataaattcttcaaattcaatctatgttgttataatatttttaaaattaa 20712179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 36325775 - 36325833
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||||||||||| ||||| |||| ||||||||| |||||| || |||||||    
T  36325775 gagggtttatatgaattcttcaaattcaatctatgttgttaaaatattattaaaattaa 36325833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 39889679 - 39889621
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||| | |||||||    
T  39889679 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcataaaattaa 39889621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 133
Target Start/End: Original strand, 42806239 - 42806277
Alignment:
Q  95 tatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  42806239 tatgaattcttcaaatttaatctatgttgttataatatt 42806277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 43036415 - 43036354
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagg 63  Q
    |||||||||||||| |||| ||||  ||||| ||||||||||||||||| |||||||| ||||    
T  43036415 ttaatttttcttca-aatataaaaccctcctcatttgggagaactaaaaaattgtattggagg 43036354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 13061409 - 13061360
Alignment:
Q  95 tatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  13061409 tatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 13061360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 23412053 - 23412000
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtat 57  Q
    ||||||||||||||| |||||| ||||| ||||||  ||||||||| |||||||    
T  23412053 atttttcttcataattcaaaatcctcctcatttggaggaactaaaaaattgtat 23412000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 25561334 - 25561281
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| |||||||||  ||||| ||||| ||||||| |||||||    
T  25561334 tttatatgaattcttcaaatttaatatatgttattatattattcttaaaattaa 25561281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 28848889 - 28848829
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||||||||||||| ||||||  ||||| ||||||| ||||| ||| |||||||| |||||    
T  28848889 atttttcttcataacacaaaaccctcctcatttgggggaactcaaaaattgtattggagga 28848829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 6491165 - 6491302
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattc 103  Q
    ||||||||||||||||||||||  |||| ||||||| ||||| ||| |||||||| ||||||||   |||||||   |||  |||| |||||||||||||    
T  6491165 atttttcttcataatacaaaatcttcctcatttgggggaactcaaaaattgtattggaggaaga---ttttggggtgtttcggagggtttatatgaattc 6491261  T
Q  104 tttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    || ||||||||   ||||||||||||||||||| |||||||    
T  6491262 ttcaaatttaacttatgttgttataatattcttaaaattaa 6491302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 2679902 - 2679849
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||||||||||||||| |||||||||||||||| || |||||||    
T  2679902 tttatatgaattctttaaatttaatctatgttgttataatatttttaaaattaa 2679849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 6373123 - 6373255
Alignment:
Q  8 ttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattcttta 107  Q
    ||||||| |||| ||||  ||||| ||||||| ||||||||| |||||||||||||||  || |||||||   |||  |||| |||||||||||| ||||    
T  6373123 ttcttcaaaatataaaaccctcctcatttggg-gaactaaaaaattgtattcgaggaa--ag-ttttggggggtttgggagggtttatatgaatttttta 6373218  T
Q  108 aatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||  |||||||||| |||||||| |||||||    
T  6373219 aatttaatatatgttgttatgatattcttaaaattaa 6373255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 15974318 - 15974458
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| ||||||||||||||| | | |||||| ||||| ||||||||||| |||||  | |||||   || |||||||   |||| |||| |||||| |||    
T  15974318 ttaacttttcttcataatactatactctcctcatttgagagaactaaaaaattgttgtggaggag--ag-ttttgggggtttttggagggtttatacgaa 15974414  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||||| ||||||||||| |||| || |||||||    
T  15974415 ttctttaaatttaatctatgttgttatattatttttaaaattaa 15974458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 35683576 - 35683436
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| |||||||| ||||    ||| ||||||  ||||| |||| || ||| |||    
T  35683576 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggagg--tgaga-tttgggggattttggagggttaataagaa 35683480  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||  |||||||||||||||| || |||||||    
T  35683479 ttcttcaaatttaatttatgttgttataatatttttaaaattaa 35683436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 3081354 - 3081295
Alignment:
Q  85 agaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||||||||||||||||||  ||||| ||||||||||||| |||||||    
T  3081354 agagggtttatatgaattctttaaatttaatatatgttcttataatattcttaaaattaa 3081295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 15399871 - 15399933
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||| ||||||||||||||||||||||||||  ||||||||||||||| || |||||||    
T  15399871 ttttagagg-tttatatgaattctttaaatttaatctttgttgttataatatttttaaaattaa 15399933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 2021040 - 2021098
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| |||||||| |||| ||||||||||||||||||| |||||||    
T  2021040 gagggtttatatgaattttttaaattcaatctatgttgttataatattcttaaaattaa 2021098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 13569341 - 13569470
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| ||||||||||||||||||||| |||| ||||||  |||||| || ||| |||| ||||| |    ||||||| | |||| ||||||| ||| |||    
T  13569341 ttaacttttcttcataatacaaaattttcctcatttggaggaactacaaaattatattggaggaggg---ttttggggagttttggaggattaataagaa 13569437  T
Q  101 ttctttaaatttaatcgatgttgttataatatt 133  Q
    || || |||||||||| | ||||||||||||||    
T  13569438 tttttcaaatttaatctaggttgttataatatt 13569470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 26149663 - 26149721
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  26149663 gaggatttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 26149721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 10955793 - 10955653
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| ||||| |||||||||||||  ||||| ||||||| ||||||||| ||||||||   ||| || ||||||| |   ||||||||  || |||| ||    
T  10955793 ttaacttttcatcataatacaaaaccctcctcatttgggggaactaaaagattgtatt---ggaggaggattttgaggggttttagagagttaatatcaa 10955697  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||| |||||| |||| |||| || |||||||    
T  10955696 ttcttcaaatttaatctatgttgctatactatttttaaaattaa 10955653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 15770105 - 15770158
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||| |||||||    
T  15770105 tttatatgaattttttaaattcaatctatgttgttataatattcttaaaattaa 15770158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 15916943 - 15916999
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaatt 142  Q
    |||| |||||| ||||||||||||||||||  ||||||||||||||||||| |||||    
T  15916943 gagggtttatacgaattctttaaatttaatatatgttgttataatattcttaaaatt 15916999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 1935133 - 1935070
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| ||||| ||||||||| |||||||||  ||||||||||||||||||| |||||||    
T  1935133 ttttggagggtttatgtgaattcttcaaatttaatatatgttgttataatattcttaaaattaa 1935070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 3676531 - 3676480
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaatt 142  Q
    ||||||||||||||| |||||||||| |||||| |||||||||||| |||||    
T  3676531 tttatatgaattcttcaaatttaatctatgttgctataatattcttaaaatt 3676480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 4841731 - 4841672
Alignment:
Q  85 agaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| ||||||||||||||| ||||| |||  ||||||||||||||||||| |||||||    
T  4841731 agagggtttatatgaattcttcaaattgaatatatgttgttataatattcttaaaattaa 4841672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 5088896 - 5088833
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||||||| |||||||| |||||||||  |||| |||||||||||||| |||||||    
T  5088896 ttttggaggatttataggaattcttcaaatttaatttatgtagttataatattcttaaaattaa 5088833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 10295526 - 10295601
Alignment:
Q  69 gattttgggaaattttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||  || | |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  10295526 gattttgggaggttatggagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 10295601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 17092957 - 17093015
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  17092957 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 17093015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 17668161 - 17668099
Alignment:
Q  80 attttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaatt 142  Q
    ||||| |||| |||| |||||||||| |||||||||| |||| |||||||||||||| |||||    
T  17668161 attttggagggtttacatgaattcttcaaatttaatctatgtagttataatattcttaaaatt 17668099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 27480193 - 27480135
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  27480193 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 27480135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 41923223 - 41923265
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    ||||||||||||||| |||||||||| ||||||||||||||||    
T  41923223 tttatatgaattcttcaaatttaatctatgttgttataatatt 41923265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 9621957 - 9621904
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| |||||||||| || ||||||||||||| || |||||||    
T  9621957 tttatatgaattcttcaaatttaatctatattgttataatatttttaaaattaa 9621904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 19389855 - 19389791
Alignment:
Q  80 attttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||| |||| |||||||||| |||||||||| |||| ||||||||||| || |||||||    
T  19389855 attttggagggtttacatgaattcttcaaatttaatctatgtagttataatatttttaaaattaa 19389791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 19389917 - 19389858
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||| ||||||||||||||||| ||||| ||||||| ||||||||| |||||||| |||||    
T  19389917 atttatcttcataatacaaaatcctcctcatttggg-gaactaaaaaattgtattggagga 19389858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21916396 - 21916348
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaa 49  Q
    ||||||||||||||| ||||||||  ||||||||||||| |||||||||    
T  21916396 ttaatttttcttcatgatacaaaaccctccttatttgggggaactaaaa 21916348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 37508490 - 37508353
Alignment:
Q  5 tttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattct 104  Q
    ||||| ||||||||| ||||||| ||| ||||||  ||||| ||| |||||||| | ||| |  | |||||||   || | |||| |||||||||||| |    
T  37508490 tttttattcataataaaaaattcccctcatttggaggaactcaaaaattgtattgggggagg--gtttttggggggttatggagggtttatatgaatttt 37508393  T
Q  105 ttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    | ||||| |||| |||||||||||||||| || |||||||    
T  37508392 tcaaattcaatctatgttgttataatatttttaaaattaa 37508353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 14570076 - 14570013
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| ||||||||||||||| |||||||||| | ||||||||| |||| || |||||||    
T  14570076 ttttggagggtttatatgaattcttcaaatttaatctaagttgttatattatttttaaaattaa 14570013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 33718240 - 33718299
Alignment:
Q  86 gaggatttatatgaattcttt-aaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||| ||| ||||| |||| | ||||||||||||||||| |||||||    
T  33718240 gaggatttatatgaattttttcaaattcaatctacgttgttataatattcttaaaattaa 33718299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 37909046 - 37909109
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| ||||||||||||||| ||||| |||| || ||||||||||| |||| |||||||    
T  37909046 ttttggagggtttatatgaattcttcaaattcaatctatattgttataatactcttaaaattaa 37909109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 38289368 - 38289431
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| |||||| || ||||| ||||| |||| ||||||||||||||||||| |||||||    
T  38289368 ttttggagggtttatacgagttcttcaaattcaatctatgttgttataatattcttaaaattaa 38289431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 43496902 - 43496855
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    |||| ||||||||||||||| |||||||||  ||||||||||||||||    
T  43496902 gagggtttatatgaattcttcaaatttaatttatgttgttataatatt 43496855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 344101 - 344152
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||||||||||||||  ||||| |||||| |||||| |||||||    
T  344101 tttatatgaattctttaaatttaat--atgtttttataacattcttaaaattaa 344152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 1658237 - 1658295
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||| ||||||||||||| |||||||    
T  1658237 gagggtttatatgaatttttcaaattcaatctatgttattataatattcttaaaattaa 1658295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 5836869 - 5836923
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtatt 58  Q
    ||||||||||||||||||||| ||| || ||||||| ||||| ||| ||||||||    
T  5836869 atttttcttcataatacaaaactcttctcatttgggggaacttaaaaattgtatt 5836923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3925883 - 3925827
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtatt 58  Q
    ||||||||||||||| ||| | ||||||||| ||||||| ||||||||| ||||||||    
T  3925883 ttaatttttcttcatgatatagaattctcctcatttggg-gaactaaaaaattgtatt 3925827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10843022 - 10843079
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtatt 58  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| ||||||||    
T  10843022 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtatt 10843079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 25026911 - 25027040
Alignment:
Q  12 tcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattctttaaatt 111  Q
    |||||||| |||||   ||| ||||||||||||||||| |||||||| | |||||  | |||||||   || | |||| || |||| | || ||||||||    
T  25026911 tcataataaaaaatctccctcatttgggagaactaaaaaattgtattgg-ggaag--ggttttggggggttatggagggttaatataatttttttaaatt 25027007  T
Q  112 taatcgatgttgttataatattctttaaattaa 144  Q
     |||| ||||||||||||||||||| |||||||    
T  25027008 caatctatgttgttataatattcttaaaattaa 25027040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 38302374 - 38302321
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||| ||||| ||||||||||||| |||||||    
T  38302374 tttatatgaatttttcaaattcaatctatgttattataatattcttaaaattaa 38302321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 38568393 - 38568356
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttata 128  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  38568393 tttatatgaattcttcaaatttaatctatgttgttata 38568356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 39027804 - 39027857
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||| |||  ||||||||||||| |||||||||||||||| || |||||||    
T  39027804 tttatataaatcttttaaatttaatctatgttgttataatatttttaaaattaa 39027857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 39011895 - 39011939
Alignment:
Q  89 gatttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    ||||||||||||||||| |||||||||  |||| |||||||||||    
T  39011895 gatttatatgaattcttaaaatttaatatatgtagttataatatt 39011939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 46670045 - 46669908
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattc 103  Q
    ||||||||||| |||| ||||  ||||| ||||| | ||||||||| |||||||| ||   ||||  ||||||||| | | ||||| |||||||||||||    
T  46670045 atttttcttcaaaatataaaaccctcctcatttgagggaactaaaaaattgtattaga---agaaagttttgggaagtgtgagagggtttatatgaattc 46669949  T
Q  104 tttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||  ||||||||||||||||||| |||||||    
T  46669948 tttaaatttaatatatgttgttataatattcttaaaattaa 46669908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 8827922 - 8827791
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||||| ||||||||||||||||| |||||| |||||||| ||||||||  |||||||| ||||      |||||| |  ||||||||| ||||||| ||    
T  8827922 ttaattattcttcataatacaaaactctcctcatttggga-aactaaaaagttgtattcaaggatcg---ttttggaaggttttagagggtttatatcaa 8827827  T
Q  101 ttctttaaatttaatcgatgttgttataatattctt 136  Q
    ||||| |||||||||| |||||||||||||||||||    
T  8827826 ttcttcaaatttaatctatgttgttataatattctt 8827791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 28175567 - 28175427
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||| ||||| ||||||  ||||||||| |||||||   |||| || | ||||| |  ||||| |||| || ||| |||    
T  28175567 ttaacttttcttcataatacaaaatcctcctcatttggaggaactaaaaaattgtat---aggaggagggttttgagggattttggagggttaataagaa 28175471  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||||  |||||||||||||||| || |||||||    
T  28175470 ttctttaaatttaatttatgttgttataatatttttaaaattaa 28175427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 28880045 - 28880109
Alignment:
Q  80 attttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||||||||||||| |||||||||  ||||||||||||||||||| |||||||    
T  28880045 attttggaggatttatatgaattcttcaaatttaatatatgttgttataatattcttaaaattaa 28880109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 31428856 - 31428918
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaatta 143  Q
    |||| ||||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  31428856 ttttggaggatttacatgaattcttttaatttaatctatgttgttataatattcttaaaatta 31428918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 42650617 - 42650754
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattc 103  Q
    ||||||||||| |||| ||||  ||||| ||||||| ||||||||| |||||||| ||||| |    ||||||||  |||  || | |||||||||||||    
T  42650617 atttttcttcaaaatataaaaccctcctcatttgggggaactaaaaaattgtattggaggaggg---ttttgggaggtttgggatggtttatatgaattc 42650713  T
Q  104 tttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    || |||||||||  |||| |||||||||||||| |||||||    
T  42650714 ttcaaatttaatttatgtcgttataatattcttaaaattaa 42650754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 12708937 - 12708797
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| ||||||||   ||| || | |||||||   |||| |||| || ||| |||    
T  12708937 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtatt---ggaggagggttttggggggttttggagggttaataagaa 12708841  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||  |||||||||||||||| || |||||||    
T  12708840 ttcttcaaatttaatttatgttgttataatatttttaaaattaa 12708797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 16535680 - 16535809
Alignment:
Q  12 tcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattctttaaatt 111  Q
    |||||||| |||||   ||| ||||||| ||||||||| |||||||| | |||||  | | ||||| |||| | |||| |||||||||||| || |||||    
T  16535680 tcataataaaaaatatccctcatttgggggaactaaaaaattgtattgg-ggaag--ggtcttggggaattatggagggtttatatgaatttttcaaatt 16535776  T
Q  112 taatcgatgttgttataatattctttaaattaa 144  Q
    ||||| ||||||||||||||||||| |||||||    
T  16535777 taatctatgttgttataatattcttaaaattaa 16535809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 30198874 - 30198734
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| ||||||||   ||| || | ||||| | | |||| |||| || ||| |||    
T  30198874 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtatt---ggaggagggttttgaggagttttggagggttaataagaa 30198778  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||  |||||||||||||||| || |||||||    
T  30198777 ttcttcaaatttaatttatgttgttataatatttttaaaattaa 30198734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 40423089 - 40423036
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  40423089 tttatatgaattcttcaaatttaatctatgttgttataatattcttaaaattaa 40423036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 27143158 - 27143296
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttg-ggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaatt 102  Q
    ||||||||| |||||| |||| |||| | ||||| |||||||||||| ||||||||   ||| || ||||||| |   ||| ||| | ||||||||||||    
T  27143158 atttttctttataatataaaactctcttcatttgtggagaactaaaaaattgtatt---ggatgaggattttgtggggtttgagacggtttatatgaatt 27143254  T
Q  103 ctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||| |||||||||  || |||||||||||||||| |||||||    
T  27143255 cttcaaatttaatatatattgttataatattcttaaaattaa 27143296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 144
Target Start/End: Original strand, 54806529 - 54806588
Alignment:
Q  85 agaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  54806529 agaggatttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 54806588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 21730348 - 21730290
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||||||||||||||||  |||| ||||||||||||||||||| |||||||    
T  21730348 gagggtttatatgaattctttaaatccaatctatgttgttataatattcttgaaattaa 21730290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 8828226 - 8828174
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  8828226 tttatatgaattctttaaatttaatctttgttgttataatatt-tttaaattaa 8828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 11976815 - 11976947
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    ||||||||||||||||||||||||   | || ||||  | |||||||||  |||||||   ||| || | ||| ||| | |||| |||| ||||||||||    
T  11976815 ttaatttttcttcataatacaaaacatttctcatttaagggaactaaaaagttgtatt---ggatgaggttttaggggagttttggagggtttatatgaa 11976911  T
Q  101 ttctttaaatttaatcgatgttgttataatattctt 136  Q
    || ||||||||||||  |||||||||||||||||||    
T  11976912 ttttttaaatttaatatatgttgttataatattctt 11976947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 32649020 - 32648967
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || |||||||||| ||||||||||||||||||| |||||||    
T  32649020 tttatatgaatttttcaaatttaatctatgttgttataatattcttaaaattaa 32648967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 49936498 - 49936555
Alignment:
Q  6 ttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagg 63  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||| |||||||| ||||    
T  49936498 ttttcttcataatacaaaatcctcctaatttgggggaactaaaaaattgtattggagg 49936555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 49936567 - 49936620
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||    
T  49936567 tttatatgaattcttcaaattcaatctatgttgttataatattcttaaaattaa 49936620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 52555015 - 52554962
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||||||||||||| | |||| |||||||||||||| |||||||    
T  52555015 tttatatgaattctttaaatttaacctatgtagttataatattcttaaaattaa 52554962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 16318595 - 16318735
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| ||||||||||| |||||||  ||||| ||||||  ||||||||| |||||||| ||||| |  |||||||||   |||| |||| || ||| |||    
T  16318595 ttaacttttcttcatattacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagg--gattttggg-ggttttggagggttaataagaa 16318691  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    || || |||||||||  |||||||||||||||| || |||||||    
T  16318692 ttattcaaatttaatttatgttgttataatatttttaaaattaa 16318735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 48620355 - 48620407
Alignment:
Q  92 ttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||| |||||||||  ||||||||||||||||||| |||||||    
T  48620355 ttatatgaattcttcaaatttaatatatgttgttataatattcttaaaattaa 48620407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 35959174 - 35959237
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    ||||||||||||||||||||||||  ||||| ||||||| |||||||||  ||||||| |||||    
T  35959174 ttaatttttcttcataatacaaaaccctcctcatttgggggaactaaaaagttgtattggagga 35959237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 3127033 - 3126975
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  3127033 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 3126975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 7182212 - 7182154
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  7182212 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 7182154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 9119885 - 9119758
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattc 103  Q
    ||||||||||| |||| |||| |||||| |||||||| |||||||| |||||||| ||||| |    ||||| | | |||  || |||||||||||||||    
T  9119885 atttttcttcaaaatataaaactctcctcatttggga-aactaaaatattgtattggaggaggg---ttttgagta-tttgggaagatttatatgaattc 9119791  T
Q  104 tttaaatttaatcgatgttgttataatattctt 136  Q
    || |||||||||  | |||||||||||||||||    
T  9119790 ttcaaatttaatatacgttgttataatattctt 9119758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 20533987 - 20534045
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||  |||| |||||||||||||||||||||||||||    
T  20533987 gagggtttatatgaatttttcaaatccaatctatgttgttataatattctttaaattaa 20534045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 25057682 - 25057628
Alignment:
Q  87 aggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaat 141  Q
    |||||||| ||||||| |||||||| |||| ||||||||||||||||||| ||||    
T  25057682 aggatttagatgaattttttaaattcaatctatgttgttataatattcttaaaat 25057628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 32060706 - 32060764
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  32060706 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 32060764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 47669870 - 47669928
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  47669870 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 47669928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 52594647 - 52594589
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || |||| ||||| ||||||||||||||||||| |||||||    
T  52594647 gagggtttatatgaatttttcaaatctaatctatgttgttataatattcttaaaattaa 52594589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 13270018 - 13270071
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  13270018 tttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 13270071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 37756739 - 37756686
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  37756739 tttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 37756686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 49404639 - 49404586
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  49404639 tttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 49404586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 52430591 - 52430538
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| |||||||||  |||||||||||||||| || |||||||    
T  52430591 tttatatgaattcttcaaatttaatatatgttgttataatatttttaaaattaa 52430538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 30765762 - 30765825
Alignment:
Q  80 attttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||||||||| ||| |||| |||| ||||| |||||||||| ||| ||||||    
T  30765762 attttagaggatttatatgaatt-tttcaattcaatcaatgttattataatatttttttaattaa 30765825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32866832 - 32866779
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgta 56  Q
    ||||||||||||||||||||||| ||||||| ||||||  ||||||||| ||||||    
T  32866832 ttaatttttcttcataatacaaagttctcctcatttgg--gaactaaaaaattgta 32866779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 41363827 - 41363775
Alignment:
Q  92 ttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  41363827 ttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 41363775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 55509932 - 55509984
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    |||| |||| ||||||||||||||| |||||||||| |||||| |||||||||    
T  55509932 ttttggagggtttatatgaattcttcaaatttaatctatgttgctataatatt 55509984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29114336 - 29114273
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| |||||||| |||||    
T  29114336 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggagga 29114273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 32948547 - 32948492
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaat 141  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| ||||    
T  32948547 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaat 32948492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 368125 - 368175
Alignment:
Q  94 atatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| |||||||||  |||||||||||||||| || |||||||    
T  368125 atatgaattcttcaaatttaatttatgttgttataatatttttaaaattaa 368175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 38317249 - 38317191
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||  |||| ||||||||||||||||||| |||||||    
T  38317249 gagggtttatatgaatttttcaaatccaatctatgttgttataatattcttaaaattaa 38317191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 9836798 - 9836749
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataat 130  Q
    ||||||||| ||||||||||||||| ||| |||||| |||| ||||||||    
T  9836798 ttttagagggtttatatgaattcttcaaagttaatctatgtagttataat 9836749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 17873261 - 17873314
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||  ||||||||||||||||||| |||||||    
T  17873261 tttatatgaatttttcaaattcaatttatgttgttataatattcttaaaattaa 17873314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 21296121 - 21296068
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||| |||| || ||||| |||| ||||||||||||||||||| |||||||    
T  21296121 tttatataaatttttcaaattgaatctatgttgttataatattcttaaaattaa 21296068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 31530084 - 31530137
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||| |||| || ||||| |||| ||||||||||||||||||| |||||||    
T  31530084 tttatattaatttttcaaattcaatctatgttgttataatattcttaaaattaa 31530137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 43929821 - 43929768
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||||||||||||||   | ||||||||||||| || |||||||    
T  43929821 tttatatgaattctttaaatttaatatttattgttataatatttttaaaattaa 43929768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 45823533 - 45823590
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtatt 58  Q
    |||| ||||||||||||||||||| |||||| |||||||  |||| ||| ||||||||    
T  45823533 ttaacttttcttcataatacaaaactctcctcatttggggaaacttaaaaattgtatt 45823590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 48830826 - 48830777
Alignment:
Q  95 tatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  48830826 tatgaatttttcaaattcaatcaatgttgttataatattcttaaaattaa 48830777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 49668130 - 49668077
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||| ||||||||||||| ||||||||||| |||| || |||||||    
T  49668130 tttacatgaattttttaaatttaatctatgttgttatattatttttaaaattaa 49668077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 54205820 - 54205873
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtat 57  Q
    |||||||||||||| ||||||| ||||| ||||||| ||||| ||| |||||||    
T  54205820 atttttcttcataaaacaaaatcctcctcatttgggggaactcaaaaattgtat 54205873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 13270296 - 13270248
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattc 134  Q
    |||| |||||||||||| || ||||| |||| |||||||||||||||||    
T  13270296 gagggtttatatgaatttttcaaattcaatctatgttgttataatattc 13270248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 24279974 - 24280018
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataat 130  Q
    |||| |||||||||||| || |||||||||| |||||||||||||    
T  24279974 gagggtttatatgaatttttcaaatttaatctatgttgttataat 24280018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 28710434 - 28710390
Alignment:
Q  89 gatttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    ||||||||||||||||| ||||| |||  ||||||||||||||||    
T  28710434 gatttatatgaattcttcaaattcaatttatgttgttataatatt 28710390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 30307435 - 30307487
Alignment:
Q  92 ttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||| |||||||||  ||| |||| |||||||||| |||||||    
T  30307435 ttatatgaattcttcaaatttaatatatgctgttgtaatattcttaaaattaa 30307487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 44076582 - 44076645
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaa 65  Q
    |||||||||||||||||||||||| ||| || | || || ||||||||| |||||||| ||||||    
T  44076582 ttaatttttcttcataatacaaaactcttctcacttagg-gaactaaaaaattgtatttgaggaa 44076645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 43733219 - 43733083
Alignment:
Q  5 tttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattct 104  Q
    ||||| ||||||||||||||| ||||| ||||| | ||| ||||| |||||||| ||||| |  | ||||||||  |||| ||||||||||||||||| |    
T  43733219 tttttattcataatacaaaatcctcctcatttgagggaattaaaaaattgtattggaggagg--gtttttgggag-ttttggaggatttatatgaatttt 43733123  T
Q  105 ttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    | ||||| |||| ||||||||||||||||||| |||||||    
T  43733122 taaaattcaatctatgttgttataatattcttaaaattaa 43733083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 23702577 - 23702451
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattc 103  Q
    ||||||||| ||||||||||||||  ||||||||| |||||| ||| |||||||| ||||||||   ||||||||| || |  | |||||||||||||||    
T  23702577 atttttcttaataatacaaaattc--cttatttgg-agaactcaaaaattgtattggaggaaga---ttttgggaagttatgaatgatttatatgaattc 23702484  T
Q  104 tttaaatttaatcgatgttgttataatattctt 136  Q
    || |||||||||| ||||||| |||||||||||    
T  23702483 ttcaaatttaatctatgttgtaataatattctt 23702451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 33412226 - 33412171
Alignment:
Q  89 gatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||    
T  33412226 gatttatatgtattctttaaatttaatctatgttgttataatattcttaaaattaa 33412171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 1839920 - 1839783
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattc 103  Q
    ||||||||||| |||| ||||  ||||| ||||||| ||||| ||| |||||||| ||||| |    |||||||   ||| ||||| |||||||||||||    
T  1839920 atttttcttcaaaatataaaaccctcctcatttgggggaacttaaaaattgtattggaggaggg---ttttggggggtttaagagggtttatatgaattc 1839824  T
Q  104 tttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    || |||||||||  |||||||||||||||| || |||||||    
T  1839823 ttcaaatttaatatatgttgttataatatttttaaaattaa 1839783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 39193909 - 39194041
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    ||||||||||||||||||| ||||  ||| | ||||||| |||||||||  ||||||| ||||| |  | |||||||   ||| | ||| ||||||||||    
T  39193909 ttaatttttcttcataatataaaaccctcttcatttgggggaactaaaaagttgtattggaggagg--gtttttgggggttttga-agggtttatatgaa 39194005  T
Q  101 ttctttaaatttaatcgatgttgttataatattctt 136  Q
    ||||| ||||||| || |||||||||||||||||||    
T  39194006 ttcttcaaatttattctatgttgttataatattctt 39194041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 27085408 - 27085466
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||||||||||| |||||||||  |||||||||||||||| ||||||||||    
T  27085408 gagggtttatatgaattcttcaaatttaatatatgttgttataatattttttaaattaa 27085466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 2474858 - 2474730
Alignment:
Q  12 tcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattctttaaatt 111  Q
    |||||||| ||||| ||||| ||||||||||||| ||| |||||||| | || ||  |||||||||   || | |||| |||||||||||| || |||||    
T  2474858 tcataataaaaaatcctcctcatttgggagaacttaaaaattgtatt-gtgggag--gattttggggg-ttatggagggtttatatgaatttttcaaatt 2474763  T
Q  112 taatcgatgttgttataatattctttaaattaa 144  Q
     |||| ||||||||||||||||||| |||||||    
T  2474762 caatctatgttgttataatattcttaaaattaa 2474730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 13865108 - 13865055
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || |||||||||| ||||||||||||||||||| |||||||    
T  13865108 tttatatgaatttttcaaatttaatctatgttgttataatattcttaaaattaa 13865055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 41455324 - 41455377
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||| |||||||    
T  41455324 tttatatgaattcttcaaatttaatatatgttgttataatattcttaaaattaa 41455377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 3404597 - 3404537
Alignment:
Q  84 tagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  3404597 tagagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 3404537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 44879528 - 44879634
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattc 103  Q
    |||||||||||| || |||||||||||| |||| || ||||||||| |||||||| |||||||    ||||| |  ||||| |||| |||| ||||||||    
T  44879528 atttttcttcatgattcaaaattctcctcatttagg-gaactaaaaaattgtattggaggaagg---ttttgagggattttggagggtttacatgaattc 44879623  T
Q  104 tttaaatttaa 114  Q
    |||||||||||    
T  44879624 tttaaatttaa 44879634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 44880393 - 44880287
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattc 103  Q
    |||||||||||| || |||||||||||| |||| || ||||||||| |||||||| |||||||    ||||| |  ||||| |||| |||| ||||||||    
T  44880393 atttttcttcatgattcaaaattctcctcatttagg-gaactaaaaaattgtattggaggaagg---ttttgagggattttggagggtttacatgaattc 44880298  T
Q  104 tttaaatttaa 114  Q
    |||||||||||    
T  44880297 tttaaatttaa 44880287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 144
Target Start/End: Original strand, 16424197 - 16424256
Alignment:
Q  85 agaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| ||||||||||||||| |||||||||  |||| |||||||||||||| |||||||    
T  16424197 agagggtttatatgaattcttcaaatttaatatatgtagttataatattcttaaaattaa 16424256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 31149957 - 31150012
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctt 136  Q
    |||| |||| ||||||||||||||| ||||||| || |||||||||||||||||||    
T  31149957 ttttggagggtttatatgaattcttcaaatttattctatgttgttataatattctt 31150012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 1942074 - 1942016
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  1942074 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 1942016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 34272575 - 34272633
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  34272575 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 34272633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 43007758 - 43007816
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || |||||||||| ||||||||||||||||||  |||||||    
T  43007758 gagggtttatatgaatttttcaaatttaatctatgttgttataatattctcaaaattaa 43007816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 43239648 - 43239776
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||| ||||||  ||||| ||||||| ||| ||||| ||||||||   ||| || | ||||| |  |||||  ||| ||||||||||    
T  43239648 ttaacttttcttcataacacaaaagcctcctcatttggg-gaattaaaaaattgtatt---ggatgaggtttttgagggattttgaagggtttatatgaa 43239743  T
Q  101 ttctttaaatttaatcgatgttgttataatatt 133  Q
    ||||| |||||||||| |||||| |||||||||    
T  43239744 ttcttcaaatttaatctatgttgatataatatt 43239776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 6884 - 6929
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctt 136  Q
    |||||||||||| |||||||| |||| |||||||||||||||||||    
T  6884 tttatatgaattttttaaattcaatctatgttgttataatattctt 6929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 32218 - 32271
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| |||| ||||  ||||||||||||||||||| |||||||    
T  32218 tttatatgaattcttcaaatgtaatttatgttgttataatattcttaaaattaa 32271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 23932661 - 23932511
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggattt------- 93  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| |||||||| ||||| ||   |||||||   ||||||||| |||           
T  23932661 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagga---ttttggggggttttagagggttttggaggg 23932565  T
Q  94 ---atatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
       ||| ||||||||||||||||||  |||||||||||||||| || |||||||    
T  23932564 ttaataagaattctttaaatttaatttatgttgttataatatttttaaaattaa 23932511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 40985174 - 40985114
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||||| ||||||||||||||| ||||| ||||||| ||||| ||| |||||||| |||||    
T  40985174 atttttattcataatacaaaatcctcctcatttgggggaactcaaaaattgtattggagga 40985114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 5935228 - 5935275
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    ||||||||| |||||||||| |||||||||  ||||||||||||||||    
T  5935228 gaggatttaaatgaattcttcaaatttaatatatgttgttataatatt 5935275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 144
Target Start/End: Original strand, 8948684 - 8948743
Alignment:
Q  85 agaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| ||||||||| ||||| |||||||||  ||||||||||||||||| | |||||||    
T  8948684 agagggtttatatgacttcttcaaatttaatatatgttgttataatattcataaaattaa 8948743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 15108279 - 15108228
Alignment:
Q  92 ttatatgaattctttaaatttaatcgatgttgttataatattctttaaatta 143  Q
    ||||||||||| || ||||| |||| ||||||||||||||||||| ||||||    
T  15108279 ttatatgaatttttcaaattaaatctatgttgttataatattcttaaaatta 15108228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 16024587 - 16024544
Alignment:
Q  93 tatatgaattctttaaatttaatcgatgttgttataatattctt 136  Q
    |||||||||| ||||||||||||  |||||||||||||||||||    
T  16024587 tatatgaattttttaaatttaatatatgttgttataatattctt 16024544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 79711 - 79653
Alignment:
Q  6 ttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    ||||||||||||||| |||  ||||| ||||||| ||||||||| |||||||| |||||    
T  79711 ttttcttcataatactaaaccctcctcatttgggggaactaaaaaattgtattggagga 79653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 12595373 - 12595423
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctt 136  Q
    |||| ||||||||||||||| |||||||||| ||||  |||||||||||||    
T  12595373 gagggtttatatgaattcttcaaatttaatctatgtatttataatattctt 12595423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 13537414 - 13537460
Alignment:
Q  98 gaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||| |||||||||||||||  ||||||||||||| |||||||    
T  13537414 gaattcttcaaatttaatcgatgtaattataatattcttaaaattaa 13537460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 13626962 - 13627008
Alignment:
Q  98 gaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||| |||||||||||||||  ||||||||||||| |||||||    
T  13626962 gaattcttcaaatttaatcgatgtaattataatattcttaaaattaa 13627008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 29584234 - 29584292
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||||||||||| ||| |||||| ||||||||||| |||| || |||||||    
T  29584234 gagggtttatatgaattcttcaaaattaatctatgttgttatattatttttaaaattaa 29584292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 31297369 - 31297311
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||| ||||||||||||| |||||||    
T  31297369 gagggtttatatgaatttttcaaattcaatctatgttattataatattcttaaaattaa 31297311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 32158825 - 32158883
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| |||||| |||||  |||||||||||||||| || |||||||    
T  32158825 gagggtttatatgaattttttaaaattaatatatgttgttataatatttttaaaattaa 32158883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 36102911 - 36102853
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||| |||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  36102911 gagggtttatttgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 36102853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 4873258 - 4873205
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||||||||  ||||||||||||||| || |||||||    
T  4873258 tttatatgaatttttcaaatttaatctgtgttgttataatatttttaaaattaa 4873205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 7080006 - 7079957
Alignment:
Q  95 tatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||| ||||||| || |||||||||||||||| || |||||||    
T  7080006 tatgaattcttcaaatttagtctatgttgttataatatttttaaaattaa 7079957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 9054527 - 9054482
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctt 136  Q
    |||||||||||||||| ||||||||   ||||||||||||||||||    
T  9054527 tttatatgaattctttcaatttaatatttgttgttataatattctt 9054482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 13227775 - 13227828
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || |||||||||  |||||||||||||||| || |||||||    
T  13227775 tttatatgaattattcaaatttaatttatgttgttataatatttttaaaattaa 13227828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 25033445 - 25033498
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || |||||  ||| ||||||||||||||||||| |||||||    
T  25033445 tttatatgaatttttcaaattcgatctatgttgttataatattcttaaaattaa 25033498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 29612056 - 29612109
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||| |||||||||||||||| || |||||||    
T  29612056 tttatatgaatttttcaaattaaatctatgttgttataatattattaaaattaa 29612109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 34336095 - 34336148
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| |||||||||| || |||||||| |||| || |||||||    
T  34336095 tttatatgaattcttcaaatttaatctattttgttatattatttttaaaattaa 34336148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 34349780 - 34349833
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||  ||||||||||||||||||| |||||||    
T  34349780 tttatatgaatttttcaaattcaatatatgttgttataatattcttaaaattaa 34349833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 39405051 - 39405084
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttg 37  Q
    ||||||||||| ||||||||||||||||||||||    
T  39405051 atttttcttcacaatacaaaattctccttatttg 39405084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 41866143 - 41866090
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||| ||||||| |||||||||| ||||||||||| |||| || |||||||    
T  41866143 tttatataaattcttcaaatttaatctatgttgttatattatttttaaaattaa 41866090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 43438320 - 43438267
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||| ||||| |||||||| | || |||||||||||||||| |||||||    
T  43438320 tttatatgagttcttaaaatttaaactatattgttataatattcttaaaattaa 43438267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 28169858 - 28169918
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||||||||||||||||||||| || || ||||||| ||||| ||| | |||||| |||||    
T  28169858 atttttcttcataatacaaaatccttctaatttgggggaactcaaaaaatgtattggagga 28169918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 31305812 - 31305748
Alignment:
Q  80 attttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||| ||||||||||||||| |||||||||  | ||| |||| |||||||| |||||||    
T  31305812 attttggagggtttatatgaattcttcaaatttaatatacgttcttattatattcttaaaattaa 31305748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 33231050 - 33231010
Alignment:
Q  104 tttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||| |||| ||||||||||||||||||| |||||||    
T  33231050 tttaaattcaatctatgttgttataatattcttaaaattaa 33231010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 34148594 - 34148542
Alignment:
Q  92 ttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||| || ||||| |||| ||||| ||||||||||||| |||||||    
T  34148594 ttatatgaatttttcaaattcaatctatgtttttataatattcttaaaattaa 34148542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 13697262 - 13697398
Alignment:
Q  3 aatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaatt 102  Q
    ||||||||||||||||||||||  ||||| ||||||| |||||||||  |||||||   |||||| | || |||||| |||| |||| ||||||| ||||    
T  13697262 aatttttcttcataatacaaaaccctcctcatttgggggaactaaaaagttgtatt---ggaagacggttgtgggaagttttggagggtttatattaatt 13697358  T
Q  103 ctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||| |||||||||   |||||||||||||||||||| |||||    
T  13697359 cttcaaatttaat--gtgttgttataatattctttatattaa 13697398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 30080950 - 30081079
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||| | ||||| |  ||| |||| ||||||||   | |||| | |||||||| |||||||||| ||||||||||    
T  30080950 ttaacttttcttcataatacaaaaccctcatcatttgaggaaacaaaaaaattgtatt---gaaagagggttttgggagattttagagggtttatatgaa 30081046  T
Q  101 ttctttaaatttaatcgatgttgttataatatt 133  Q
    ||||| | |||||||| ||||||||||||||||    
T  30081047 ttcttcagatttaatctatgttgttataatatt 30081079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 133
Target Start/End: Complemental strand, 2826345 - 2826221
Alignment:
Q  6 ttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattctt 105  Q
    ||||||||||||||| |||  ||||| ||||||| ||||||||| |||||||| ||||| |    |||||||  ||||| || | |||||||||||||||    
T  2826345 ttttcttcataatactaaaccctcctcatttgggggaactaaaaaattgtattggaggaggg---ttttgggggattttggaagctttatatgaattctt 2826249  T
Q  106 taaatttaatcgatgttgttataatatt 133  Q
     |||||||||| ||||||||||| ||||    
T  2826248 caaatttaatcaatgttgttatattatt 2826221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 42267109 - 42266970
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||||||||||||||||||||||| |||  | |||||| |||| | ||| |||||||| |||||||    |||||| |  ||||  ||| ||||||||||    
T  42267109 ttaatttttcttcataatacaaaactcttatcatttgg-agaattcaaaaattgtattggaggaagg---ttttggaaggttttttagggtttatatgaa 42267014  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    | ||| |||||||||| ||||||||||||||||||| |||||||    
T  42267013 tgcttcaaatttaatctatgttgttataatattcttaaaattaa 42266970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 15749052 - 15748912
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| |||||||| || || |  |||||||||   |||| |||| || ||| |||    
T  15749052 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggatgagg--gattttggg-ggttttggagggttaataagaa 15748956  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||  |||||||||||||||| || |||||||    
T  15748955 ttcttcaaatttaatttatgttgttataatatttttaaaattaa 15748912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 144
Target Start/End: Original strand, 1277997 - 1278056
Alignment:
Q  85 agaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| ||||||||||||||| |||||||||  ||||||||||||||||||| |||||||    
T  1277997 agagggtttatatgaattcttcaaatttaatatatgttgttataatattcttaaaattaa 1278056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 33872146 - 33872083
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| ||||||||||||||| |||||||||| ||||||||||| |||| ||||||||||    
T  33872146 ttttggagggtttatatgaattcttcaaatttaatctatgttgttatattattttttaaattaa 33872083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 38505370 - 38505307
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| ||||||||||||||| |||||||||| |||||||||||||||| || |||||||    
T  38505370 ttttggagggtttatatgaattcttcaaatttaatctatgttgttataatatttttaaaattaa 38505307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 43348332 - 43348202
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||| |||||||||| |||| ||||||||||||| ||||||||| |||||||| |||||          |||   |||| |||| || |||||||    
T  43348332 ttaactttttttcataatactaaatcctccttatttgggggaactaaaaaattgtattagagga----------ggg---ttttggagggttaatatgaa 43348246  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||| |||||||||||||||| || |||||||    
T  43348245 ttcttcaaatttaatctatgttgttataatatttttaaaattaa 43348202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 23551711 - 23551756
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctt 136  Q
    ||||||||||||||||||||||| || |||||||||||||||||||    
T  23551711 tttatatgaattctttaaatttattctatgttgttataatattctt 23551756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 31891341 - 31891386
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctt 136  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||    
T  31891341 tttatatgaattcttcaaatttaatctatgttgttataatattctt 31891386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 42113061 - 42112930
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||||||||||||||||||| ||| |||||| ||||||| |||||||||  |||||||   |||| | | |||||||   |||  |||| ||||||||||    
T  42113061 ttaatttttcttcataatactaaactctcctcatttggg-gaactaaaaagttgtatt---ggaatagggttttggggggtttaggagggtttatatgaa 42112966  T
Q  101 ttctttaaatttaatcgatgttgttataatattctt 136  Q
    || || ||||||| || ||||||||| |||||||||    
T  42112965 tttttcaaatttattcaatgttgttaaaatattctt 42112930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43741683 - 43741740
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtatt 58  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  43741683 ttaacttttcttcataatacaaaactctcctcatttgggagaactcaaaaattgtatt 43741740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 19644346 - 19644410
Alignment:
Q  81 ttttagaggatttatatgaattcttt-aaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||||||||||||| ||| ||||| |||| ||||||||||||||||||| |||||||    
T  19644346 ttttggaggatttatatgaattttttcaaattcaatctatgttgttataatattcttaaaattaa 19644410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 12624396 - 12624337
Alignment:
Q  85 agaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| ||||||||||||||| |||||||||  || |||||||||||||||| |||||||    
T  12624396 agaggttttatatgaattcttcaaatttaatatatattgttataatattcttaaaattaa 12624337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 38137998 - 38138049
Alignment:
Q  93 tatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||| |||||||||| |||||||||||||||| || |||||||    
T  38137998 tatatgaattcttcaaatttaatctatgttgttataatatttttgaaattaa 38138049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 5968074 - 5968016
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  5968074 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 5968016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 14676284 - 14676346
Alignment:
Q  80 attttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaatt 142  Q
    ||||| |||| |||| |||||||||| |||||||||| |||| |||||||||||||| |||||    
T  14676284 attttggagggtttacatgaattcttcaaatttaatctatgtagttataatattcttaaaatt 14676346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 41002272 - 41002214
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  41002272 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 41002214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 43188917 - 43188975
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  43188917 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 43188975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 43665190 - 43665132
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  43665190 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 43665132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 23620809 - 23620756
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  23620809 tttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 23620756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 25522230 - 25522177
Alignment:
Q  87 aggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaa 140  Q
    ||||||||| |||||| ||||||||||||| ||||| |||||||||| ||||||    
T  25522230 aggatttatttgaattttttaaatttaatctatgttcttataatattttttaaa 25522177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 45066788 - 45066841
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| ||||| |||| ||||||||||||| ||||| |||||||    
T  45066788 tttatatgaattcttcaaattcaatctatgttgttataatgttcttaaaattaa 45066841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 17884294 - 17884158
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    ||||||||||||||||||||||||  || |||||||| | ||||||||| |||||||| ||||| |    | ||||    |||| || | ||||||||||    
T  17884294 ttaatttttcttcataatacaaaa--cttcttatttgag-gaactaaaaaattgtattggaggagggctttgttgg----ttttggacggtttatatgaa 17884202  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||  ||||| |||||||| |||| |||||||    
T  17884201 ttcttcaaatttaattcatgttattataatagtcttaaaattaa 17884158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 30081423 - 30081478
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctt 136  Q
    |||| |||| ||||| ||||||||| |||||||||  |||||||||||||||||||    
T  30081423 ttttggagggtttatgtgaattcttcaaatttaatatatgttgttataatattctt 30081478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 33187869 - 33187810
Alignment:
Q  85 agaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| ||||||||||||||| |||| ||||  || |||||||||||||||| |||||||    
T  33187869 agagggtttatatgaattcttcaaatataatatatattgttataatattcttaaaattaa 33187810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38505437 - 38505374
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||| |||||||||||||||||||  ||||| ||||||| |||||| || |||||||| |||||    
T  38505437 ttaacttttcttcataatacaaaaccctcctcatttgggggaactataaaattgtattggagga 38505374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 4788101 - 4788048
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtatt 58  Q
    |||||||||||||||| |||||  |||||||||||| ||||||||| ||||||||    
T  4788101 atttttcttcataatataaaatcatccttatttggg-gaactaaaaaattgtatt 4788048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 6746600 - 6746542
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||||||||||| |||||||| | |||||||||||||  |||| |||||||    
T  6746600 gagggtttatatgaattcttcaaatttaacctatgttgttataatgatcttaaaattaa 6746542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6746672 - 6746610
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagg 63  Q
    |||||||||||| ||||||||||| | |||| ||||||| ||||| ||| |||||||| ||||    
T  6746672 ttaatttttctttataatacaaaactttcctcatttgggggaactcaaaaattgtattggagg 6746610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 17818346 - 17818404
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| |||||||||| |||||||||| ||||||||||| |||| || |||||||    
T  17818346 gagggtttagatgaattcttcaaatttaatctatgttgttatagtatttttaaaattaa 17818404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 23772555 - 23772501
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaac 145  Q
    ||||||||||||||| |||||||||  ||||| | ||||||||||| ||||||||    
T  23772555 tttatatgaattcttcaaatttaatatatgttttcataatattcttaaaattaac 23772501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 25335367 - 25335425
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || |||||||||| || ||||||||| |||||| |||||||    
T  25335367 gagggtttatatgaatttttcaaatttaatctattttgttataaaattcttaaaattaa 25335425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 28437563 - 28437505
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||| |||| || ||||| |||| ||||||||||||||||||| |||||||    
T  28437563 gagggtttatatcaatttttcaaattcaatctatgttgttataatattcttaaaattaa 28437505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 33406653 - 33406595
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||| |||| || ||||| |||| ||||||||||||||||||| |||||||    
T  33406653 gagggtttatatcaatttttcaaattcaatctatgttgttataatattcttaaaattaa 33406595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 35264913 - 35264855
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || |||||||||  |||||||||||||||| || |||||||    
T  35264913 gagggtttatatgaatttttcaaatttaatttatgttgttataatatttttaaaattaa 35264855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 42620373 - 42620315
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| || |||||||||||||||| |||||||    
T  42620373 gagggtttatatgaatttttcaaattcaatctatattgttataatattcttaaaattaa 42620315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 43741402 - 43741444
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||    
T  43741402 tttatacgaattctttaaatttaatctatgtttttataatatt 43741444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 13044212 - 13044265
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| |||||||||  ||||||||||| |||| || |||||||    
T  13044212 tttatatgaattcttcaaatttaatatatgttgttatattatttttaaaattaa 13044265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 32650399 - 32650354
Alignment:
Q  99 aattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||||||  |||||||||||||||| || |||||||    
T  32650399 aattctttaaatttaatttatgttgttataatatttttaaaattaa 32650354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 36747360 - 36747413
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||| || |||||||||||||||| |||||||    
T  36747360 tttatatgaatttttcaaattcaatctatattgttataatattcttaaaattaa 36747413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 45940503 - 45940446
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtatt 58  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| ||||||||    
T  45940503 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtatt 45940446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 46449237 - 46449290
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||| ||||| ||||||||||||| |||||||    
T  46449237 tttatatgaatttttcaaattcaatctatgttattataatattcttaaaattaa 46449290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 3363674 - 3363725
Alignment:
Q  90 atttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||||||||||||  |   ||||||||||||||| |||||||    
T  3363674 atttatatgaattctttaaatttaatata---tgttataatattcttaaaattaa 3363725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 36845440 - 36845404
Alignment:
Q  108 aatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  36845440 aatttaatctatgttgttataatattcttaaaattaa 36845404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 38137922 - 38137982
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||||||||||||||||||||| ||||| ||||||| || || |||  ||||||| |||||    
T  38137922 atttttcttcataatacaaaatcctcctcatttgggggagctcaaaatttgtattggagga 38137982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 38233762 - 38233710
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    |||| |||||||||||||||||||| || |||| || ||||| ||||||||||    
T  38233762 ttttcgaggatttatatgaattcttcaattttattccatgttattataatatt 38233710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 38991491 - 38991439
Alignment:
Q  89 gatttatatgaattctttaaatttaatcgatgttgttataatattctttaaat 141  Q
    |||||||||||||| || |||||||||  ||||| ||||||||||||| ||||    
T  38991491 gatttatatgaattattcaaatttaatatatgttattataatattcttaaaat 38991439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 32858811 - 32858948
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattc 103  Q
    |||||||||||||||| ||||| ||||| ||||||| ||||| ||| ||||||||||||| |||   |||||||   |||| |||| |||| ||||||||    
T  32858811 atttttcttcataatataaaatcctcctcatttgggggaactcaaaaattgtattcgagg-aga--gttttggggggttttggagggtttacatgaattc 32858907  T
Q  104 tttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
     | |||||||||| |||| |||||||||||||| |||||||    
T  32858908 atcaaatttaatctatgtagttataatattcttaaaattaa 32858948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 35283065 - 35283205
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||||||||||||| |||| ||||  ||||| ||||||| ||||||||| |||||||| |||||||    ||||| |   |||  |||| ||||||||||    
T  35283065 ttaatttttcttcaaaatataaaaccctcctcatttgggggaactaaaaaattgtattggaggaagg---ttttgaggggtttgggagggtttatatgaa 35283161  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| | |||||||  ||||||||||||||||||| |||||||    
T  35283162 ttcttcatatttaatatatgttgttataatattcttaaaattaa 35283205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 41099829 - 41099691
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| ||||||||| |||||||||  ||||||||||||||||||||||| |||||||| |||||||  | ||||||  |||||||  || ||||||| ||    
T  41099829 ttaacttttcttcacaatacaaaaccctccttatttgggagaactaaaa-attgtattggaggaag--gtttttgg--aattttacggggtttatataaa 41099735  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    || || |||||||||| |||||| | ||||||| || |||||||    
T  41099734 tttttcaaatttaatctatgttgatgtaatatttttaaaattaa 41099691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 50948184 - 50948324
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| | ||||  ||||||||| |||||||| ||||| |    |||| ||||||||| ||||||| ||| |||    
T  50948184 ttaacttttcttcataatacaaaaccctcctcagttggaggaactaaaaaattgtattggaggaggg---tttttggaaattttggaggattaataagaa 50948280  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    || || |||||||||  |||||||||||||||| || |||||||    
T  50948281 tttttcaaatttaatttatgttgttataatatttttaaaattaa 50948324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 53888468 - 53888605
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattc 103  Q
    ||||||||||| |||| ||||  |||||| |||||| ||||||||| |||||||| ||||| |    |||||||   |||  |||| |||||||||||||    
T  53888468 atttttcttcaaaatataaaaccctccttgtttgggggaactaaaaaattgtattggaggaggg---ttttggggggtttgggagggtttatatgaattc 53888564  T
Q  104 tttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    || |||||||||  ||||||| ||||||||||| |||||||    
T  53888565 ttcaaatttaatatatgttgtaataatattcttaaaattaa 53888605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 3537186 - 3537324
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| ||||||| ||||||||| |||||||| |||| |||   |||||||   |||||||||   ||||||||    
T  3537186 ttaacttttcttcataatacaaaaccctcctcatttgggggaactaaaaaattgtattggagg-aga--gttttgggggtttttagagg--gtatatgaa 3537280  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||| |||||  ||||||||| || |||||||    
T  3537281 ttcttcaaatttaatctatgttaatataatatttttaaaattaa 3537324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 40674172 - 40674225
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  40674172 tttatatgaattctttaaatttaatatatgttgttataatattcttaaaattaa 40674225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 15499397 - 15499264
Alignment:
Q  6 ttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattctt 105  Q
    ||||||||||||||||||||  |||| ||||||||||||| ||| ||||||||   ||| || ||||||||    ||||  ||| |||| || |||| ||    
T  15499397 ttttcttcataatacaaaatcttcctcatttgggagaactcaaaaattgtatt---ggaggatgattttggagggttttgaagggtttacataaattttt 15499301  T
Q  106 taaatttaatcgatgttgttataatattctttaaatt 142  Q
     |||||||||| |||| |||||||||||||| |||||    
T  15499300 caaatttaatctatgtagttataatattcttaaaatt 15499264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 36637864 - 36637918
Alignment:
Q  90 atttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||| |||||||    
T  36637864 atttatatgaattcttcaaatttaatatatgttgttataatattcttaaaattaa 36637918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 39114989 - 39114927
Alignment:
Q  82 tttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||| ||||||||||||||| ||||| |||| ||||| ||||||||||||| |||||||    
T  39114989 tttagagggtttatatgaattcttcaaattcaatctatgttattataatattcttaaaattaa 39114927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 46175290 - 46175236
Alignment:
Q  90 atttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||| |||||||    
T  46175290 atttatatgaattctttaaatttaatctatgttgttatagaattcttaaaattaa 46175236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 46891446 - 46891504
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| ||||||| |||||||||  ||||||||||||||||||| |||||||    
T  46891446 gaggatttatataaattcttcaaatttaatatatgttgttataatattcttaaaattaa 46891504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 48370210 - 48370152
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||| || |||||||||  ||||||||||||||||||| |||||||    
T  48370210 gaggatttatatgaatttttcaaatttaatttatgttgttataatattcttaaaattaa 48370152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 33944743 - 33944603
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| ||||||||   ||| || | |||||||   |||| |||| || ||| |||    
T  33944743 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtatt---ggaggagggttttggggggttttggagggttaataagaa 33944647  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||  ||||||||||||| || || |||||||    
T  33944646 ttcttcaaatttaatttatgttgttataatgtttttaaaattaa 33944603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 1132961 - 1132898
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| |||| ||||||||||||||||||||| |||| ||| |||||||||| |||||||    
T  1132961 ttttggagggtttacatgaattctttaaatttaatctatgtagttgtaatattcttaaaattaa 1132898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 1340001 - 1339864
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    ||||||||||||||||||||| || |||| | |||||   ||||| ||| ||||||||   |||||||| ||||||    ||| | |||||||| |||||    
T  1340001 ttaatttttcttcataatacataactctcatcatttgaaggaactcaaaaattgtatt---ggaagaaggttttggagggtttga-aggatttacatgaa 1339906  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaatt 142  Q
    ||||| |||||||||| || || ||||||||||||| |||||    
T  1339905 ttcttcaaatttaatctattttattataatattcttaaaatt 1339864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 2420714 - 2420777
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  2420714 ttttggagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 2420777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 34306653 - 34306716
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  34306653 ttttggagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 34306716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 47359364 - 47359423
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaa 140  Q
    |||| |||| ||||||||||||||| |||||||||| ||||||||||| |||| ||||||    
T  47359364 ttttggagggtttatatgaattcttcaaatttaatctatgttgttatattattttttaaa 47359423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 54126320 - 54126367
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    |||| |||| |||||||||| |||||||||||||||||||||||||||    
T  54126320 gagggtttacatgaattcttcaaatttaatcgatgttgttataatatt 54126367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 54372602 - 54372539
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||| ||||||||||||||| ||||| | || ||||||||||||||||| | |||||||    
T  54372602 ttttagagggtttatatgaattcttcaaattcagtctatgttgttataatattcctaaaattaa 54372539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 7661096 - 7661154
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||| || ||||| |||  ||||||||||||||||||| |||||||    
T  7661096 gaggatttatatgaatttttcaaattcaatatatgttgttataatattcttaaaattaa 7661154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 14271793 - 14271847
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtatt 58  Q
    ||||| |||||||||||||||||||| |||||| | |||||||||| ||||||||    
T  14271793 attttgcttcataatacaaaattctctttattttgaagaactaaaaaattgtatt 14271847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 17642649 - 17642707
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| |||| || ||||| |||| ||||||||||||||||||| |||||||    
T  17642649 gaggatttatataaatttttcaaattcaatccatgttgttataatattcttaaaattaa 17642707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 19148227 - 19148285
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||||||| ||| |||||||||  ||||||||||||||||||| |||||||    
T  19148227 gagggtttatatgaatgcttcaaatttaatttatgttgttataatattcttaaaattaa 19148285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 31178268 - 31178210
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||| || ||||| |||| |||||| |||||||||||| |||||||    
T  31178268 gaggatttatatgaatttttcaaattcaatctatgttgctataatattcttaaaattaa 31178210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 33982760 - 33982702
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  33982760 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 33982702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 37457058 - 37457120
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaatta 143  Q
    |||||||||||||| ||||||||||  ||||||||| |||| |||||||| ||||| ||||||    
T  37457058 ttttagaggatttacatgaattcttcgaatttaatctatgtagttataatgttcttaaaatta 37457120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 39499258 - 39499316
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  39499258 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 39499316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 47714694 - 47714636
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  47714694 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 47714636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 47789467 - 47789409
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  47789467 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 47789409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 41961993 - 41961940
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  41961993 tttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 41961940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 43007538 - 43007485
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  43007538 tttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 43007485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 44412171 - 44412118
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| |||||||| |||| |||||||||||||||| || |||||||    
T  44412171 tttatatgaattttttaaattcaatctatgttgttataatatttttaaaattaa 44412118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 11500085 - 11500219
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattc 103  Q
    |||||||||||||||| ||||  ||||| |||||||| |||||||| |||||||| ||||     | |||| | |  |||| |||  |||| || |||||    
T  11500085 atttttcttcataatagaaaaccctcctcatttgggataactaaaaaattgtattggagg-----gctttt-gaaggttttggagagtttacattaattc 11500178  T
Q  104 tttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    || |||||||||  ||||||||||||||||||| |||||||    
T  11500179 ttcaaatttaatatatgttgttataatattcttaaaattaa 11500219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 21777736 - 21777676
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    ||||||||||||||||||||| |||| | ||||||||||| | ||| |||||||| |||||    
T  21777736 atttttcttcataatacaaaactctcatcatttgggagaaatcaaaaattgtattggagga 21777676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 33419054 - 33419002
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    ||||||||| |||| ||||||| ||||||||||||| ||||| ||||||||||    
T  33419054 ttttagagggtttacatgaattttttaaatttaatctatgttattataatatt 33419002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 46017215 - 46017267
Alignment:
Q  12 tcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||||||| ||||| ||||||||||||||||||| ||| |||||||| |||||    
T  46017215 tcataataaaaaatcctccttatttgggagaactcaaaaattgtattggagga 46017267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 47434341 - 47434285
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaatt 142  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||    
T  47434341 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaatt 47434285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 49183740 - 49183792
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    |||| |||| ||||||||||||||| |||||||||| ||||||||||| ||||    
T  49183740 ttttggagggtttatatgaattcttcaaatttaatctatgttgttatattatt 49183792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 29623296 - 29623343
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    |||| ||||||||||||||| |||||||||  ||||||||||||||||    
T  29623296 gagggtttatatgaattcttcaaatttaatatatgttgttataatatt 29623343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 30131908 - 30131849
Alignment:
Q  85 agaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||||| || ||||| |||| || |||||||||||||||| |||||||    
T  30131908 agagggtttatatgaatttttcaaattcaatctatcttgttataatattcttaaaattaa 30131849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 38639567 - 38639630
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| |||||||| |||||    
T  38639567 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggagga 38639630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 53664702 - 53664639
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| |||||||| |||||    
T  53664702 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggagga 53664639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 16883410 - 16883452
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    ||||||||||||||| |||||||||| ||||||||||| ||||    
T  16883410 tttatatgaattcttcaaatttaatctatgttgttatattatt 16883452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 23163583 - 23163641
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||| |||| ||| |||| |||| ||||||||||||||||||| |||||||    
T  23163583 gagggtttatataaatttttttaattcaatctatgttgttataatattcttaaaattaa 23163641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 25428728 - 25428786
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||| |||| || ||||| |||| ||||||||||||||||||| |||||||    
T  25428728 gagggtttatataaatttttcaaattcaatctatgttgttataatattcttaaaattaa 25428786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 25754200 - 25754142
Alignment:
Q  6 ttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||||||||||||||||||  ||||| ||||||  ||||||||| |||||||| |||||    
T  25754200 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggagga 25754142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 27055925 - 27055867
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| |||||||||||||||| || |||||||    
T  27055925 gagggtttatatgaatttttcaaattcaatctatgttgttataatatttttaaaattaa 27055867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 33900724 - 33900678
Alignment:
Q  98 gaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||| |||||||||| |||||||||||||||| || |||||||    
T  33900724 gaattcttcaaatttaatctatgttgttataatatttttaaaattaa 33900678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 35989167 - 35989213
Alignment:
Q  87 aggatttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    ||||||||||||||||||| |||||||||| || |||||||| ||||    
T  35989167 aggatttatatgaattcttcaaatttaatctatattgttatattatt 35989213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 38526217 - 38526271
Alignment:
Q  90 atttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||| || ||||| |||  ||||||||||||||||||| |||||||    
T  38526217 atttatatgaatttttcaaattcaatatatgttgttataatattcttaaaattaa 38526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40118987 - 40118925
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagg 63  Q
    ||||||||||||||| | ||||||  ||||| ||||||| ||||||||| |||||||| ||||    
T  40118987 ttaatttttcttcattaaacaaaaccctcctcatttgggggaactaaaaaattgtattggagg 40118925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 43237350 - 43237408
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||| ||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  43237350 gagggtttataagaatttttcaaattcaatctatgttgttataatattcttaaaattaa 43237408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 49860896 - 49860954
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||||||||  | ||||| |||| ||||||||||||||||||| |||||||    
T  49860896 gagggtttatatgaatttatcaaattcaatctatgttgttataatattcttaaaattaa 49860954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 517734 - 517678
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtatt 58  Q
    ||||||||||||||||||||||||  ||||| ||||||| ||||| ||| ||||||||    
T  517734 ttaatttttcttcataatacaaaaccctcctcatttgggggaactcaaa-attgtatt 517678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 4247182 - 4247235
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||| |||||||||| || | |||||||||||||| |||||||    
T  4247182 tttacatgaattcttcaaatttaatctatttagttataatattcttaaaattaa 4247235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 9112700 - 9112753
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||| ||||||||| |||||| || |||||| |||||||||||| |||||||    
T  9112700 tttatacgaattcttttaatttagtctatgttggtataatattcttaaaattaa 9112753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22225344 - 22225401
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtatt 58  Q
    |||||||||||||||||||| ||| |||||| |||| || ||||||||| ||| ||||    
T  22225344 ttaatttttcttcataatactaaactctcctcatttaggggaactaaaaaattatatt 22225401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 23420818 - 23420765
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| ||||||||    |||||||||||||||||| |||||||    
T  23420818 tttatatgaattcttcaaatttaacttttgttgttataatattcttaaaattaa 23420765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 28569540 - 28569487
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| |||||||||| |||| |||||| ||||||  |||||||    
T  28569540 tttatatgaattcttcaaatttaatctatgtagttatactattctcgaaattaa 28569487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 30121538 - 30121485
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||| ||||||| ||||||||||| |||||||    
T  30121538 tttatatgaatttttcaaattcaatctatgttgtaataatattcttaaaattaa 30121485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 32708790 - 32708843
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||||| |||| |||  || |||||||||||||||| |||||||    
T  32708790 tttatatgaattcttttaattcaatttatattgttataatattcttaaaattaa 32708843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 46017270 - 46017323
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||| |||||||||||||||| || |||||||    
T  46017270 tttatatgaatttttcaaattcaatctatgttgttataatatttttaaaattaa 46017323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 1133025 - 1132965
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    ||||| ||||||||||||||| |||||| |||| || ||||| ||| |||||||| |||||    
T  1133025 attttacttcataatacaaaactctcctcattttggggaactcaaaaattgtattggagga 1132965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 2927907 - 2927962
Alignment:
Q  91 tttatatgaattctttaaattta--atcgatgttgttataatattctttaaattaa 144  Q
    |||||||||| ||||||||||||  ||  ||||||||||||||||||| |||||||    
T  2927907 tttatatgaactctttaaatttataatatatgttgttataatattcttaaaattaa 2927962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 11040928 - 11040868
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||||||| |||||||||||||   ||||||||||| ||||| ||| |||||||| |||||    
T  11040928 atttttctccataatacaaaatctcccttatttgggggaactcaaaaattgtattggagga 11040868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 13638496 - 13638544
Alignment:
Q  96 atgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||| |||||||||| || | |||||||||||||| |||||||    
T  13638496 atgaattcttcaaatttaatctatatagttataatattcttaaaattaa 13638544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 21835598 - 21835650
Alignment:
Q  6 ttttcttcataatacaaaattctccttatttgggagaactaaaacattgtatt 58  Q
    |||||||| ||||||||||||| ||| ||||||| |||||||||  |||||||    
T  21835598 ttttcttcgtaatacaaaattcccctaatttgggggaactaaaaatttgtatt 21835650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30995848 - 30995895
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaa 49  Q
    |||||||||||||||||||||||| ||| || ||||||| |||||||||    
T  30995848 ttaatttttcttcataatacaaaactctactcatttggg-gaactaaaa 30995895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 31651543 - 31651491
Alignment:
Q  6 ttttcttcataatacaaaattctccttatttgggagaactaaaacattgtatt 58  Q
    |||||||||||||||||||| ||||| |||| ||| |||| ||| ||||||||    
T  31651543 ttttcttcataatacaaaatcctcctcattttggaaaacttaaaaattgtatt 31651491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 45571043 - 45570983
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    ||||||||||||||||  |||  ||||| ||||||| ||||||||| |||||||| |||||    
T  45571043 atttttcttcataatattaaaccctcctcatttgggggaactaaaaaattgtattggagga 45570983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 299 - 159
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||||||||||  ||||||||| ||||||||   ||| || | ||||| |   |||| |||| || ||| |||    
T  299 ttaacttttcttcataatacaaaaccctccttatttggaggaactaaaaaattgtatt---ggaggagggttttgcggggttttggagggttaataagaa 203  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||| |||||||||||||||| || |||||||    
T  202 ttcttcaaatttaatctatgttgttataatatttttaaaattaa 159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 2126 - 1986
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||| ||| |||||||| ||||||| |   |||||| | |||| |||| || ||| |||    
T  2126 ttaacttttcttcataatacaaaaccctcctcatttggaggaactgaaaaattgtattggaggaagga---tttggggagttttggagggttaataagaa 2030  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||  |||||||||||||||| || |||||||    
T  2029 ttcttcaaatttaatttatgttgttataatatttttaaaattaa 1986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 144
Target Start/End: Original strand, 34757589 - 34757724
Alignment:
Q  7 tttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattcttt 106  Q
    ||||||||||||||||||  ||||| ||||||  ||||||||| |||||||| ||||| |  | ||| |||   |||| ||||  ||||||||||||||     
T  34757589 tttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagg--gttttggggggtttttggagggcttatatgaattcttc 34757686  T
Q  107 aaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||| ||||||||||| |||| ||||||||||    
T  34757687 aaattcaatcaatgttgttatattattttttaaattaa 34757724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 11515022 - 11515162
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| ||||||||   ||| || | |||||||   |||| |||| || ||| |||    
T  11515022 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtatt---ggaggagggttttggggggttttggagggttaataagaa 11515118  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||  |||||||||||||||| || |||||||    
T  11515119 ttcttcaaatttaatttatgttgttataatatttttaaaattaa 11515162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 37194245 - 37194385
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| |||||||| ||||| |  | |||||||   |||| |||| || ||| |||    
T  37194245 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagg--gtttttggg-ggttttggagggttaataagaa 37194341  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||  |||||||||||||||| || |||||||    
T  37194342 ttcttcaaatttaatttatgttgttataatatttttaaaattaa 37194385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 43572647 - 43572507
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| |||||||| |||| |||   |||||||   |||| |||| || ||| |||    
T  43572647 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggagg-aga--gttttggggggttttggagggttaataagaa 43572551  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||  |||||||||||||||| || |||||||    
T  43572550 ttcttcaaatttaatttatgttgttataatatttttaaaattaa 43572507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4003406 - 4003469
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||| ||| |||||||| |||||    
T  4003406 ttaatttttcttcataatacaaaactctcctcatttgggggaactcaaaaattgtattggagga 4003469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 11522201 - 11522143
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||||||||||| |||||||||  ||||||||||||||||||| |||||||    
T  11522201 gagggtttatatgaattcttcaaatttaatatatgttgttataatattcttaaaattaa 11522143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 16519189 - 16519060
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattc 103  Q
    |||||||||||||||||||||| ||||| |||||||  ||||||||  ||||||| |||   || | | |||||   |||| |||| |||||||||||||    
T  16519189 atttttcttcataatacaaaatcctcctcatttggggaaactaaaaagttgtattagag---gagggtattggggggtttttgagggtttatatgaattc 16519093  T
Q  104 tttaaatttaatcgatgttgttataatattctt 136  Q
     | ||||||| |  |||||||||||||||||||    
T  16519092 atcaaatttattttatgttgttataatattctt 16519060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 16625825 - 16625775
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctt 136  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||||||||    
T  16625825 gagggtttatatgaattcttcaaatttaatctatgttgttataatattctt 16625775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 44954041 - 44953983
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||| |||||||||||||||  ||||| ||||||||||||| |||||||    
T  44954041 gaggatttatatgagttctttaaatttaatatatgttattataatattcttaaaattaa 44953983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 28539528 - 28539389
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| ||||||||||||| | ||| |||||| ||||||| || |||||| ||||||||   ||| ||    ||||||  ||||| |||| ||||||||||    
T  28539528 ttaacttttcttcataatgctaaactctcctcatttggggga-ctaaaaaattgtatt---ggatgagagctttgggggattttggagggtttatatgaa 28539433  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||| ||||||||||| |||| || |||||||    
T  28539432 ttcttcaaatttaatctatgttgttatattatttttaaaattaa 28539389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 43190561 - 43190512
Alignment:
Q  95 tatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  43190561 tatgaattcttcaaatttaatctatgttgttataatattcttaaaattaa 43190512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 3119875 - 3119815
Alignment:
Q  84 tagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  3119875 tagagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 3119815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 1408936 - 1408983
Alignment:
Q  97 tgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||    
T  1408936 tgaattctttaaatttattctatgttgttataatattttttaaattaa 1408983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 21834919 - 21835041
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    ||||||||||||||||||| |||| |||||| |||| || |||||||||  ||||||| ||||| |    ||||||| | |||| |||| ||||||||||    
T  21834919 ttaatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggaggg---ttttgggcagttttggagggtttatatgaa 21835015  T
Q  101 ttctttaaatttaatcgatgttgtta 126  Q
    ||  | |||||||||  |||||||||    
T  21835016 ttaatcaaatttaatatatgttgtta 21835041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 35412259 - 35412192
Alignment:
Q  69 gattttgggaaattttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctt 136  Q
    |||||||||| ||||| |||  ||||||||||||||| |||||||||   ||||||||||||||||||    
T  35412259 gattttgggagattttggagagtttatatgaattcttcaaatttaatatgtgttgttataatattctt 35412192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 39205072 - 39205135
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| ||||||||||||||| |||||||||| ||||||||||| |||| || |||||||    
T  39205072 ttttggagggtttatatgaattcttgaaatttaatctatgttgttatattatttttaaaattaa 39205135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 4042024 - 4042082
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  4042024 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 4042082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 122
Target Start/End: Original strand, 10264610 - 10264644
Alignment:
Q  88 ggatttatatgaattctttaaatttaatcgatgtt 122  Q
    |||||||||||||||||||||||||||||||||||    
T  10264610 ggatttatatgaattctttaaatttaatcgatgtt 10264644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 13765960 - 13765902
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  13765960 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 13765902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 18780444 - 18780502
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||| || ||||| |||| |||||||||||||||| || |||||||    
T  18780444 gaggatttatatgaatttttcaaattcaatctatgttgttataatattattaaaattaa 18780502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 31584865 - 31584737
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattc 103  Q
    ||||||||||| |||| ||||  ||||| ||||||| ||||||||| ||| ||||  |||| ||   |||||||   ||| ||||| |||||||||| ||    
T  31584865 atttttcttcaaaatataaaaccctcctcatttggg-gaactaaaaaattatattgaaggagga---ttttggggggtttgagagggtttatatgaagtc 31584770  T
Q  104 tttaaatttaatcgatgttgttataatattctt 136  Q
    || |||||||||  |||||||||||||||||||    
T  31584769 ttcaaatttaatatatgttgttataatattctt 31584737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 36567299 - 36567241
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  36567299 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 36567241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 3039307 - 3039254
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| |||||||| |||| || |||||||||||||||| |||||||    
T  3039307 tttatatgaattatttaaattcaatctatattgttataatattcttaaaattaa 3039254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 7486384 - 7486421
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttata 128  Q
    |||||||||||||||||||||||||| |||||||||||    
T  7486384 tttatatgaattctttaaatttaatctatgttgttata 7486421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 8410946 - 8410893
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  8410946 tttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 8410893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 31082870 - 31082923
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| |||||||||  |||||||||||||||| || |||||||    
T  31082870 tttatatgaattcttcaaatttaatttatgttgttataatatttttaaaattaa 31082923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 37217020 - 37217073
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| |||||||||| ||| || |||||||||||| |||||||    
T  37217020 tttatatgaattcttcaaatttaatctatgctgctataatattcttaaaattaa 37217073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 8555799 - 8555739
Alignment:
Q  84 tagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||| |||||||||||| || ||||| |||| || |||||||||||||||| |||||||    
T  8555799 tagagggtttatatgaatttttcaaattcaatctatattgttataatattcttaaaattaa 8555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 30072161 - 30072102
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    ||||||||||| |||| ||||| ||||| ||||||||||||||||| |||||||| |||||    
T  30072161 atttttcttcaaaatataaaatcctcctcatttgggagaactaaaa-attgtattggagga 30072102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 36030794 - 36030846
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgta 56  Q
    ||||||||||| |||||||||||||||| ||||||| ||||| ||| ||||||    
T  36030794 atttttcttcagaatacaaaattctcctcatttgggggaactcaaaaattgta 36030846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1364811 - 1364874
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| |||||||| |||||    
T  1364811 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggagga 1364874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 7497768 - 7497807
Alignment:
Q  89 gatttatatgaattctttaaatttaatcgatgttgttata 128  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  7497768 gatttatataaattctttaaatttaatctatgttgttata 7497807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 21626180 - 21626243
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| || ||| |||||||| |||||||||| |||||||||||||||| || |||||||    
T  21626180 ttttggagggttaataagaattcttcaaatttaatctatgttgttataatatttttaaaattaa 21626243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 30523225 - 30523287
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||| |||||||||||||||||||| || || ||||||| ||||||||| |||||||| |||||    
T  30523225 ttaaattttcttcataatacaaaatccttctaatttggg-gaactaaaaaattgtattggagga 30523287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 40211986 - 40212108
Alignment:
Q  6 ttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattctt 105  Q
    |||||||||||||||||||  ||||| ||||||  ||||||||| ||||||||   ||| || | |||||||   |||| |||| || ||| |||||||     
T  40211986 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtatt---ggatgagggttttggggggttttggagggttaataagaattcta 40212082  T
Q  106 taaatttaatcgatgttgttataata 131  Q
     |||||||||  ||||||||||||||    
T  40212083 caaatttaatttatgttgttataata 40212108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 44656772 - 44656713
Alignment:
Q  85 agaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| ||||| |||||| || |||||||||  ||||||||||||||||||| |||||||    
T  44656772 agagggtttatgtgaattgttcaaatttaatatatgttgttataatattcttaaaattaa 44656713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 3038968 - 3038910
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||| |||| || ||||| |||| ||||||||||||||||||| |||||||    
T  3038968 gagggtttatatcaatttttcaaattcaatctatgttgttataatattcttaaaattaa 3038910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 5322219 - 5322165
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtatt 58  Q
    |||||||||||||||||||||| ||||| ||||||| ||||| ||| | ||||||    
T  5322219 atttttcttcataatacaaaatcctcctcatttgggggaactcaaaaactgtatt 5322165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 8990984 - 8990926
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||  || ||||| |||| ||||||||||||||||||| |||||||    
T  8990984 gagggtttatatgaatatttcaaattcaatctatgttgttataatattcttaaaattaa 8990926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 10165473 - 10165531
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| |||||||| |||||||||| |||||||    
T  10165473 gagggtttatatgaatttttcaaattcaatctatgttgttgtaatattcttaaaattaa 10165531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 136
Target Start/End: Original strand, 11950070 - 11950108
Alignment:
Q  98 gaattctttaaatttaatcgatgttgttataatattctt 136  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  11950070 gaattcttcaaatttaatctatgttgttataatattctt 11950108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 18826247 - 18826189
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||  ||||||||||||||||||| |||||||    
T  18826247 gagggtttatatgaatttttcaaattcaatttatgttgttataatattcttaaaattaa 18826189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 19382937 - 19382995
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| | || |||||  ||| ||||||||||||||||||| |||||||    
T  19382937 gaggatttatatgaaattttcaaattctatctatgttgttataatattcttaaaattaa 19382995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 31899377 - 31899319
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| || |||||||||||||||| |||||||    
T  31899377 gagggtttatatgaatttttcaaattcaatctatattgttataatattcttaaaattaa 31899319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 36030853 - 36030911
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||||||||| ||||| | || ||||| || |||||||||| |||||||    
T  36030853 gaggatttatatgaattcttcaaattcagtctatgtttttgtaatattcttaaaattaa 36030911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 36870303 - 36870361
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||||||||||| || ||||||  | ||||||||||||||||| |||||||    
T  36870303 gagggtttatatgaattcttcaattttaatatacgttgttataatattcttaaaattaa 36870361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 38293948 - 38294006
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| |  ||||| |||| ||||||||||||||||||| |||||||    
T  38293948 gagggtttatatgaattttccaaattcaatctatgttgttataatattcttaaaattaa 38294006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 39819879 - 39819932
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtatt 58  Q
    |||||||||| ||||||||||| ||||| ||||||| ||||||||| ||||||||    
T  39819879 atttttcttcctaatacaaaatcctcctcatttggg-gaactaaaaaattgtatt 39819932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 44137195 - 44137253
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||| ||||||||||||| |||||||    
T  44137195 gagggtttatatgaatttttcaaattcaatctatgttcttataatattcttaaaattaa 44137253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 9087481 - 9087428
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| |||||||||  ||||||| |||||||| || |||||||    
T  9087481 tttatatgaattcttcaaatttaatatatgttgtcataatattattaaaattaa 9087428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 13767483 - 13767536
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||| |||||||||||||||| || |||||||    
T  13767483 tttatatgaatttttcaaattcaatctatgttgttataatatttttaaaattaa 13767536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15555449 - 15555392
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtatt 58  Q
    ||||||||||||||||||||||||  || || ||||||  ||||||||| ||||||||    
T  15555449 ttaatttttcttcataatacaaaacccttctcatttggaggaactaaaaaattgtatt 15555392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 16813679 - 16813724
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgtta 126  Q
    |||| |||| ||||||| |||||||||||||||||| |||||||||    
T  16813679 ttttggagggtttatataaattctttaaatttaatctatgttgtta 16813724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 16852958 - 16853003
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgtta 126  Q
    |||| |||| ||||||| |||||||||||||||||| |||||||||    
T  16852958 ttttggagggtttatataaattctttaaatttaatctatgttgtta 16853003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 35550185 - 35550132
Alignment:
Q  80 attttagaggatttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    ||||| |||| ||||||||||||||| |||||||||| | ||||||||| ||||    
T  35550185 attttggagggtttatatgaattcttcaaatttaatctacgttgttatattatt 35550132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 40357522 - 40357575
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||  |||| ||||||||||||||||||| |||||||    
T  40357522 tttatatgaatttttcaaatccaatctatgttgttataatattcttaaaattaa 40357575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 42644640 - 42644697
Alignment:
Q  6 ttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagg 63  Q
    |||||||||||||||||| | | ||| ||||||| ||||||||| |||||||| ||||    
T  42644640 ttttcttcataatacaaattccccctaatttgggggaactaaaaaattgtattggagg 42644697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 42946740 - 42946687
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||| ||||||| |||||||||  ||||||||||| ||||||| |||||||    
T  42946740 tttatataaattcttcaaatttaatatatgttgttatactattcttaaaattaa 42946687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 1725967 - 1726019
Alignment:
Q  84 tagaggatttatatgaattctttaaatttaatcgatgttgttataatattctt 136  Q
    |||||| |||||||||||| || ||||| |||| || ||||||||||||||||    
T  1725967 tagagggtttatatgaatttttcaaattcaatctatattgttataatattctt 1726019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 1802087 - 1802039
Alignment:
Q  85 agaggatttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    ||||| ||||||||||||| ||||||| |||| ||||||||||| ||||    
T  1802087 agagggtttatatgaattccttaaattcaatctatgttgttatagtatt 1802039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 5002798 - 5002750
Alignment:
Q  96 atgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||| |||||||||| || | |||||||||||||| |||||||    
T  5002798 atgaattcttcaaatttaatctatatagttataatattcttaaaattaa 5002750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 6128869 - 6128829
Alignment:
Q  92 ttatatgaattctttaaatttaatcgatgttgttataatat 132  Q
    ||||||||||| || |||||||||| |||||||||||||||    
T  6128869 ttatatgaatttttcaaatttaatctatgttgttataatat 6128829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 30523347 - 30523395
Alignment:
Q  96 atgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| |||||||| |||| | |||||||||||| |||||||    
T  30523347 atgaattctttatatttaatctatgtaggtataatattcttgaaattaa 30523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 36870244 - 36870304
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    ||||||||||| |||| ||||  ||||| ||||||| ||||||||| |||||||| |||||    
T  36870244 atttttcttcaaaatagaaaaccctcctcatttgggggaactaaaaaattgtattggagga 36870304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 29222 - 29362
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||| | ||||||  ||||||||| |||||||| ||||||| |   ||||||   |||| |||| || ||| |||    
T  29222 ttaacttttcttcataatacaaaaccctcatcatttggaggaactaaaaaattgtattggaggaagga---tttggggggttttggagggttaataagaa 29318  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||  |||||||||||||||| || |||||||    
T  29319 ttcttcaaatttaatttatgttgttataatatttttaaaattaa 29362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 6860 - 6720
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||||||||||||   ||| || | |||||||   |||   ||| || |||||||    
T  6860 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaacattgtatt---ggaggagggttttggggggtttcgaagggttaatatgaa 6764  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||| || ||||||||||||| || |||||||    
T  6763 ttcttcaaatttaatctatcttgttataatatttttaaaattaa 6720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 7843 - 7703
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||||||||||||   ||| || | |||||||   |||   ||| || |||||||    
T  7843 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaacattgtatt---ggaggagggttttggggggtttcgaagggttaatatgaa 7747  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||| || ||||||||||||| || |||||||    
T  7746 ttcttcaaatttaatctatcttgttataatatttttaaaattaa 7703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 3581 - 3531
Alignment:
Q  94 atatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| |||||||||| || ||||||||||||| || |||||||    
T  3581 atatgaattcttcaaatttaatctatcttgttataatatttttaaaattaa 3531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 93609 - 93469
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| ||||||||||||||||||| |||||| ||||||  ||||||||| ||||||||   ||| || | |||||||   |||| |||| || ||| |||    
T  93609 ttaacttttcttcataatacaaaactctcctcatttggaggaactaaaaaattgtatt---ggaggagggttttggggggttttcgagggttaataagaa 93513  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    | ||| |||||||||  |||||||||||||||| || |||||||    
T  93512 tgcttcaaatttaatttatgttgttataatatttttaaaattaa 93469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 1567259 - 1567399
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| |||||||| || || |  |||||||||   |||| |||| || ||| |||    
T  1567259 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggatgagg--gattttggg-ggttttggagggttaataagaa 1567355  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||  |||||||||||||||| || |||||||    
T  1567356 ttcttcaaatttaatttatgttgttataatatttttaaaattaa 1567399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 2502467 - 2502329
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttg-ggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaatt 102  Q
    ||||||||| |||||| |||| |||| | ||||| |||||||||||| ||||||||   ||| || ||||||| |   ||| ||| | ||||||||||||    
T  2502467 atttttctttataatataaaactctcttcatttgtggagaactaaaaaattgtatt---ggatgaggattttgtggggtttgagacggtttatatgaatt 2502371  T
Q  103 ctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||| |||||||||  || |||||||||||||||| |||||||    
T  2502370 cttcaaatttaatatatattgttataatattcttaaaattaa 2502329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 19477319 - 19477374
Alignment:
Q  89 gatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||| |||||||||| |||||||||||||||| || |||||||    
T  19477319 gatttatatgaattcttcaaatttaatctatgttgttataatatttttaaaattaa 19477374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 12779492 - 12779631
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||| || |||||||  || |||||||||| |||||||||  ||||||| ||||| |     ||| ||| ||||| |||| || ||| |||    
T  12779492 ttaacttttcttcgtactacaaaacccttcttatttgggggaactaaaaagttgtattggaggaggg----ttttggagattttggagggttaataagaa 12779587  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||| |||||||||||||||| || |||||||    
T  12779588 ttcttcaaatttaatctatgttgttataatatttttaaaattaa 12779631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 26289612 - 26289669
Alignment:
Q  87 aggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||||| |||||||||| ||||||||||| |||| || |||||||    
T  26289612 aggatttatatgaattcttcaaatttaatctatgttgttatattatttttaaaattaa 26289669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 31345387 - 31345334
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || |||||||||| ||||||||||||||||||| |||||||    
T  31345387 tttatatgaatttttcaaatttaatctatgttgttataatattcttaaaattaa 31345334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 33212385 - 33212438
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||| |||||||    
T  33212385 tttatatgaattcttcaaatttaatacatgttgttataatattcttaaaattaa 33212438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 33590430 - 33590292
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| |||||||||||||||||||  ||||| ||||||| || |||||| ||||||||   ||| || | |||||||   |||| |||| || |||||||    
T  33590430 ttaacttttcttcataatacaaaaccctcctcatttggg-gagctaaaaaattgtatt---ggatgagggttttggggg-ttttggagggttaatatgaa 33590336  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| |||||||||| ||||| |||||||||| || |||||||    
T  33590335 ttcttcaaatttaatctatgttattataatatttttaaaattaa 33590292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 33677089 - 33677141
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  33677089 tttatatgaattctttaaatttaattg-tgttgttataatattcttaaaattaa 33677141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 20820566 - 20820503
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||||||||||| || |||||||||  ||||||||||| |||| || |||||||    
T  20820566 ttttagaggatttatatgaatttttcaaatttaatatatgttgttatattatttttaaaattaa 20820503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 25072557 - 25072494
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||| |||||| |||||||| |||||||||| ||||| ||||||||||||| |||||||    
T  25072557 ttttggagggtttatacgaattcttcaaatttaatctatgttattataatattcttaaaattaa 25072494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 26481169 - 26481094
Alignment:
Q  69 gattttgggaaattttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||| || | |||| |||||||||||| || ||||| |||| | ||||||||||||||||| |||||||    
T  26481169 gattttgggaagttatggagggtttatatgaatttttcaaattcaatctacgttgttataatattcttaaaattaa 26481094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 1029353 - 1029411
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  1029353 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 1029411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 5825392 - 5825450
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  5825392 gagggtttatatgaatttttgaaattcaatctatgttgttataatattcttaaaattaa 5825450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 24734940 - 24734998
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  24734940 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 24734998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 28551911 - 28551857
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaac 145  Q
    ||||||||||||||| |||||||||  |||||||||||||||| || ||||||||    
T  28551911 tttatatgaattcttcaaatttaatttatgttgttataatatttttaaaattaac 28551857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 32221981 - 32222117
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaa 100  Q
    |||| ||||||| ||||||  ||| |||||| ||||||  ||||||||| |||||||| |||||   || ||| ||||  |||| |||| ||||||||||    
T  32221981 ttaacttttctttataatatcaaactctcctcatttggaggaactaaaaaattgtattggaggag--agttttaggga--ttttggagggtttatatgaa 32222076  T
Q  101 ttctttaaatttaatcgatgttgttataatattctttaaat 141  Q
    ||||| |||||||| | |||||| ||||| |||||| ||||    
T  32222077 ttcttcaaatttaaactatgttgctataacattcttaaaat 32222117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 20381882 - 20381829
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| || ||||||  ||||||||||||||||||| |||||||    
T  20381882 tttatatgaattcttcaattttaatatatgttgttataatattcttaaaattaa 20381829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 23095144 - 23095091
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  23095144 tttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 23095091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 26574411 - 26574358
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  26574411 tttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 26574358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 4464985 - 4465044
Alignment:
Q  86 gaggatttatatgaattctttaaa-tttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| ||||||||||||||||||| ||||||  |||||||||||||||| || |||||||    
T  4464985 gagggtttatatgaattctttaaattttaatgcatgttgttataatatttttaaaattaa 4465044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 24875031 - 24874927
Alignment:
Q  6 ttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattctt 105  Q
    ||||||||||||||| |||  | ||| ||||||| |||||||||||||||||| ||||| |    ||||||||  |||| |||| ||||||| |||||||    
T  24875031 ttttcttcataatactaaaccc-cctcatttggg-gaactaaaacattgtattggaggaggg---ttttgggaggttttggagggtttatataaattctt 24874937  T
Q  106 taaatttaat 115  Q
    ||||||||||    
T  24874936 taaatttaat 24874927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 26713908 - 26713963
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctt 136  Q
    |||| |||| ||||||||||||||| ||||||| || ||||||||||| |||||||    
T  26713908 ttttggagggtttatatgaattcttcaaatttattctatgttgttatattattctt 26713963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32719479 - 32719416
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||||||| |||||||| |||||    
T  32719479 ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggagga 32719416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 34914687 - 34914745
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||  ||||||||||||||||||| |||||||    
T  34914687 gagggtttatatgaatttttcaaattcaatttatgttgttataatattcttaaaattaa 34914745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 13120438 - 13120385
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||| ||||| |||| |||||||||||||||| || |||||||    
T  13120438 tttacatgaattcttcaaattcaatctatgttgttataatattgttaaaattaa 13120385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 18618199 - 18618260
Alignment:
Q  6 ttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaaga 67  Q
    ||||||||||||||||||| |||| |  |||||||||| | ||| |||||||| ||||||||    
T  18618199 ttttcttcataatacaaaactctcatcgtttgggagaattcaaaaattgtattggaggaaga 18618260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 18618271 - 18618324
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||||||||||||  |||| |||||||||| || |||||||    
T  18618271 tttacatgaattctttaaatttaatctttgttattataatatttttaaaattaa 18618324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20820633 - 20820576
Alignment:
Q  1 ttaatttttcttcataatacaaaattctccttatttgggagaactaaaacattgtatt 58  Q
    |||| ||||||||||||||| ||| ||||||  |||||| ||||||||| ||||||||    
T  20820633 ttaacttttcttcataatactaaactctcctcgtttgggggaactaaaaaattgtatt 20820576  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 34306733 - 34306773
Alignment:
Q  104 tttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||| |||||||||||||||| || |||||||    
T  34306733 tttaaatttaatctatgttgttataatatttttaaaattaa 34306773  T

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Target: scaffold0128 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 144
Target Start/End: Original strand, 26362 - 26498
Alignment:
Q  6 ttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgaggaagaagattttgggaaattttagaggatttatatgaattctt 105  Q
    |||||||||||||||||||  ||||| ||||||  ||||||||| ||||||||   ||| || | |||||||   |||| |||| || ||| ||||||||    
T  26362 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtatt--tggaggagggttttggggggttttggagggttaataagaattctt 26459  T
Q  106 taaatttaatcgatgttgttataatattctttaaattaa 144  Q
     |||||||||  |||||||||||||||| || |||||||    
T  26460 caaatttaatttatgttgttataatatttttaaaattaa 26498  T

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Target: scaffold0263 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 12275 - 12222
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| |||||||||| |||||||||||||||| || |||||||    
T  12275 tttatatgaattcttcaaatttaatctatgttgttataatatttttaaaattaa 12222  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 90901 - 90848
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||||||||||||| |||||||||| |||||||||||||||| || |||||||    
T  90901 tttatatgaattcttcaaatttaatctatgttgttataatatttttaaaattaa 90848  T

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Target: scaffold0059 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 17528 - 17481
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    |||||||||||||||||||| |||||||||  ||||||||||||||||    
T  17528 gaggatttatatgaattcttcaaatttaatatatgttgttataatatt 17481  T

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Target: scaffold0388 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 7131 - 7189
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| ||||||||||||| |||||| ||||||||| || |||||||    
T  7131 gagggtttatatgaattttttaaatttaatctatgttggtataatatttttaaaattaa 7189  T

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Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 35476 - 35418
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||||| |||||||    
T  35476 gagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaa 35418  T

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Target: scaffold0119 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 37166 - 37239
Alignment:
Q  71 ttttgggaaattttagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    ||||| || ||||| |||| ||||||||||||||| |||||||||  ||||||||||| |||| || |||||||    
T  37166 ttttgagagattttggagggtttatatgaattcttcaaatttaatatatgttgttatattatttttaaaattaa 37239  T

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Target: scaffold0991 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 3294 - 3346
Alignment:
Q  81 ttttagaggatttatatgaattctttaaatttaatcgatgttgttataatatt 133  Q
    ||||||||| |||||| |||||||| || ||||||| ||||||||||||||||    
T  3294 ttttagagggtttatacgaattcttcaattttaatctatgttgttataatatt 3346  T

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Target: scaffold0717 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 1636 - 1696
Alignment:
Q  84 tagaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||| |||||||||||| || ||||  |||| ||||||||||||||||||| |||||||    
T  1636 tagagggtttatatgaatttttcaaatccaatctatgttgttataatattcttaaaattaa 1696  T

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Target: scaffold0952 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 3691 - 3633
Alignment:
Q  86 gaggatttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||| |||||||||||| || ||||  |||| ||||||||||||||||||| |||||||    
T  3691 gagggtttatatgaatttttaaaatcaaatctatgttgttataatattcttaaaattaa 3633  T

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Target: scaffold0648 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0648
Description:

Target: scaffold0648; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 7456 - 7403
Alignment:
Q  91 tttatatgaattctttaaatttaatcgatgttgttataatattctttaaattaa 144  Q
    |||||||||||||||||||||||||   | ||||||||||||| || |||||||    
T  7456 tttatatgaattctttaaatttaatatttattgttataatatttttaaaattaa 7403  T

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Target: scaffold0927 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0927
Description:

Target: scaffold0927; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 2925 - 2881
Alignment:
Q  92 ttatatgaattctttaaatttaatcgatgttgttataatattctt 136  Q
    ||||||||||||||  ||||||||| ||||||||| |||||||||    
T  2925 ttatatgaattcttcgaatttaatctatgttgttacaatattctt 2881  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 82777 - 82837
Alignment:
Q  4 atttttcttcataatacaaaattctccttatttgggagaactaaaacattgtattcgagga 64  Q
    |||||||||||||||||||||| ||||| ||||| | |||||  || |||||||| |||||    
T  82777 atttttcttcataatacaaaatcctcctaatttgagggaactccaaaattgtattggagga 82837  T

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