View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21255_low_35 (Length: 243)
Name: NF21255_low_35
Description: NF21255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21255_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 46219931 - 46219702
Alignment:
| Q |
1 |
ttgggtttattgtccccacactagccaaattgcacaaaaatctctttgtcaatcttaatccacaaaattatactattatacatacaactctaaaaccatt |
100 |
Q |
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| T |
46219931 |
ttgggtttattgtccccacactagccaaattgcacaaaaatctctttgtcaatcttaatccacaaaattatactattatacatacaactctaaaaccatt |
46219832 |
T |
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| Q |
101 |
atccaactcttgattttgtccttccggcatcacactttacatccatttgtccttttgaaaaattcatgacataaaatattttgatgtcataaatcttcaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46219831 |
atccaactcttgattttgtccttccggcatcacactttacatccatttgtccttttgaaaaattcatgacataaaatattttgatgtcataaatcttcaa |
46219732 |
T |
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| Q |
201 |
ccaagcaaattaatgttcaggtgtagtatt |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
46219731 |
ccaagcaaattaatgttcaggtgtagtatt |
46219702 |
T |
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