View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21256_high_24 (Length: 245)
Name: NF21256_high_24
Description: NF21256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21256_high_24 |
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Alignment Details
Target: chr6 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 31321002 - 31321219
Alignment:
| Q |
1 |
attgtcattgttacattaaccaaatcaaaactccaaaattcaacctttcttcatttcacatcttcatcacacaaaaacttcaacaaaaatttgannnnnn |
100 |
Q |
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| T |
31321002 |
attgtcattgttacattaaccaaatcaaaactccaaaattcaacctttcttcatttcacatcttcatcacacaaaaatttga-------ttt----tttt |
31321090 |
T |
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| Q |
101 |
nnncttttcagtgaagaaaacaataaactatggaaccagaaagatcaaaaccactacacaacttttcattcccatgtttgaaatggggtaaccaaagaac |
200 |
Q |
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| T |
31321091 |
tttcttttcagtgaagaaaacaataaactatggaaccagaaagatcaaaaccactacacaacttttcattcccatgtttgaaatggggtaaccaaagaac |
31321190 |
T |
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| Q |
201 |
actaagatgtgtcaatgaaaacaacaatt |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
31321191 |
actaagatgtgtcaatgaaaacaacaatt |
31321219 |
T |
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