View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21256_low_31 (Length: 225)

Name: NF21256_low_31
Description: NF21256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21256_low_31
NF21256_low_31
[»] chr1 (25 HSPs)
chr1 (1-225)||(7119998-7120222)
chr1 (70-133)||(870962-871025)
chr1 (84-133)||(46499944-46499993)
chr1 (84-132)||(7137092-7137140)
chr1 (85-133)||(37175960-37176008)
chr1 (84-127)||(6659634-6659677)
chr1 (89-132)||(7028228-7028271)
chr1 (84-130)||(4025029-4025075)
chr1 (84-122)||(13037795-13037833)
chr1 (67-133)||(17420117-17420183)
chr1 (91-133)||(36641813-36641855)
chr1 (88-130)||(37591367-37591409)
chr1 (84-130)||(45769836-45769882)
chr1 (91-133)||(50319230-50319272)
chr1 (84-133)||(6981423-6981472)
chr1 (85-130)||(15579415-15579460)
chr1 (103-136)||(17631188-17631221)
chr1 (84-133)||(24702192-24702241)
chr1 (84-133)||(45999378-45999427)
chr1 (85-133)||(4200161-4200209)
chr1 (97-133)||(4276726-4276762)
chr1 (84-132)||(4549797-4549845)
chr1 (85-133)||(26184683-26184731)
chr1 (85-133)||(38651499-38651547)
chr1 (84-124)||(50240975-50241015)
[»] chr5 (30 HSPs)
chr5 (70-133)||(35095873-35095936)
chr5 (92-191)||(28586803-28586897)
chr5 (84-133)||(37063164-37063213)
chr5 (86-133)||(7096217-7096264)
chr5 (84-133)||(20982225-20982274)
chr5 (69-130)||(26516214-26516275)
chr5 (87-132)||(34975312-34975357)
chr5 (69-130)||(35963164-35963225)
chr5 (84-132)||(9202839-9202887)
chr5 (86-130)||(13224362-13224406)
chr5 (84-136)||(19177410-19177462)
chr5 (97-132)||(7853602-7853637)
chr5 (69-120)||(19438213-19438264)
chr5 (92-191)||(38047892-38047986)
chr5 (90-132)||(6593237-6593279)
chr5 (99-133)||(10303747-10303781)
chr5 (84-130)||(39919739-39919785)
chr5 (91-132)||(465892-465933)
chr5 (84-133)||(11095559-11095608)
chr5 (84-129)||(29588811-29588856)
chr5 (84-133)||(35135752-35135801)
chr5 (88-133)||(39128574-39128619)
chr5 (84-132)||(11835208-11835256)
chr5 (92-132)||(12407752-12407792)
chr5 (84-132)||(19460053-19460101)
chr5 (75-119)||(29281087-29281131)
chr5 (69-133)||(32172569-32172633)
chr5 (80-132)||(33459026-33459078)
chr5 (85-133)||(34690806-34690854)
chr5 (84-132)||(40048371-40048419)
[»] chr8 (22 HSPs)
chr8 (84-133)||(14482133-14482182)
chr8 (85-191)||(4558730-4558831)
chr8 (84-133)||(35534951-35535000)
chr8 (84-133)||(39392751-39392800)
chr8 (75-132)||(42597323-42597380)
chr8 (84-132)||(1666976-1667024)
chr8 (85-133)||(8823483-8823531)
chr8 (84-132)||(26215427-26215475)
chr8 (85-189)||(29973013-29973112)
chr8 (85-189)||(34770824-34770923)
chr8 (140-191)||(10075588-10075639)
chr8 (75-133)||(25867007-25867066)
chr8 (75-113)||(8060584-8060622)
chr8 (145-175)||(10076329-10076359)
chr8 (92-191)||(39268541-39268636)
chr8 (84-129)||(10114421-10114466)
chr8 (84-133)||(34563181-34563230)
chr8 (69-130)||(38036205-38036266)
chr8 (84-133)||(40356802-40356851)
chr8 (12-60)||(2213131-2213179)
chr8 (84-132)||(35453714-35453762)
chr8 (84-132)||(37353340-37353387)
[»] chr6 (24 HSPs)
chr6 (85-133)||(24774690-24774738)
chr6 (84-133)||(4248889-4248938)
chr6 (97-175)||(7354148-7354221)
chr6 (68-122)||(31461593-31461647)
chr6 (87-132)||(507154-507199)
chr6 (84-132)||(264302-264350)
chr6 (85-133)||(2514634-2514682)
chr6 (87-175)||(10452413-10452496)
chr6 (84-132)||(11340716-11340764)
chr6 (69-133)||(22742282-22742346)
chr6 (69-129)||(33068655-33068715)
chr6 (84-132)||(33911372-33911420)
chr6 (70-133)||(13360652-13360715)
chr6 (69-116)||(31337939-31337986)
chr6 (84-130)||(3169338-3169384)
chr6 (85-119)||(30533573-30533607)
chr6 (145-186)||(4247103-4247144)
chr6 (85-122)||(4247735-4247772)
chr6 (84-133)||(29269827-29269876)
chr6 (69-122)||(33925669-33925722)
chr6 (85-133)||(2456884-2456931)
chr6 (84-132)||(8349755-8349803)
chr6 (69-117)||(14706691-14706739)
chr6 (89-133)||(29274319-29274363)
[»] chr2 (35 HSPs)
chr2 (70-133)||(14277984-14278047)
chr2 (84-183)||(17952746-17952840)
chr2 (84-133)||(31461369-31461418)
chr2 (89-133)||(32098398-32098442)
chr2 (86-133)||(33192126-33192173)
chr2 (87-133)||(12215741-12215787)
chr2 (92-186)||(32694151-32694240)
chr2 (76-133)||(10143095-10143152)
chr2 (84-133)||(25609727-25609776)
chr2 (85-122)||(26522725-26522762)
chr2 (84-133)||(28803596-28803645)
chr2 (84-133)||(33197329-33197378)
chr2 (97-191)||(35099636-35099726)
chr2 (84-192)||(28933755-28933858)
chr2 (84-135)||(1493601-1493652)
chr2 (84-131)||(34054993-34055040)
chr2 (89-131)||(5133708-5133750)
chr2 (84-122)||(7936957-7936995)
chr2 (84-130)||(10190210-10190256)
chr2 (83-129)||(12785814-12785860)
chr2 (91-133)||(37033982-37034024)
chr2 (87-133)||(42974286-42974332)
chr2 (89-130)||(9878775-9878816)
chr2 (84-133)||(13864581-13864630)
chr2 (84-133)||(34339054-34339103)
chr2 (84-133)||(37053525-37053574)
chr2 (85-122)||(41033051-41033088)
chr2 (84-132)||(4026748-4026796)
chr2 (85-133)||(5045247-5045295)
chr2 (92-132)||(5998793-5998833)
chr2 (89-133)||(13866825-13866869)
chr2 (84-132)||(36114350-36114398)
chr2 (84-132)||(36114614-36114662)
chr2 (85-133)||(38239641-38239689)
chr2 (89-121)||(41809345-41809377)
[»] chr7 (26 HSPs)
chr7 (84-178)||(27492726-27492815)
chr7 (84-130)||(47006979-47007025)
chr7 (77-133)||(5269454-5269510)
chr7 (91-138)||(42656453-42656500)
chr7 (84-178)||(47004018-47004107)
chr7 (84-133)||(30496635-30496684)
chr7 (85-133)||(5373157-5373205)
chr7 (85-129)||(33894555-33894599)
chr7 (70-133)||(45813270-45813333)
chr7 (70-174)||(46081950-46082050)
chr7 (84-130)||(24973875-24973921)
chr7 (84-178)||(27548194-27548283)
chr7 (85-179)||(31002693-31002782)
chr7 (92-133)||(1417203-1417244)
chr7 (77-130)||(1423070-1423123)
chr7 (84-133)||(3241372-3241421)
chr7 (84-133)||(7244633-7244682)
chr7 (86-131)||(7274394-7274438)
chr7 (84-133)||(46213734-46213783)
chr7 (101-133)||(2999139-2999171)
chr7 (85-133)||(5276156-5276204)
chr7 (84-132)||(15328537-15328585)
chr7 (97-133)||(25511571-25511607)
chr7 (97-133)||(28178913-28178949)
chr7 (89-133)||(31341130-31341174)
chr7 (84-132)||(37832230-37832278)
[»] scaffold0590 (1 HSPs)
scaffold0590 (84-133)||(1164-1213)
[»] scaffold0275 (1 HSPs)
scaffold0275 (84-133)||(2762-2811)
[»] chr4 (30 HSPs)
chr4 (85-133)||(21593101-21593149)
chr4 (85-136)||(4798646-4798697)
chr4 (84-178)||(2980516-2980610)
chr4 (84-133)||(4071814-4071862)
chr4 (84-133)||(47970249-47970298)
chr4 (84-133)||(54325127-54325176)
chr4 (88-132)||(30338683-30338727)
chr4 (74-130)||(32066502-32066558)
chr4 (85-133)||(51044549-51044597)
chr4 (84-131)||(4471102-4471149)
chr4 (85-132)||(21683570-21683617)
chr4 (101-136)||(24929441-24929476)
chr4 (84-122)||(4191670-4191708)
chr4 (88-133)||(4449185-4449230)
chr4 (91-132)||(6364087-6364128)
chr4 (84-133)||(18630611-18630660)
chr4 (91-132)||(26520320-26520361)
chr4 (84-133)||(36048731-36048779)
chr4 (84-133)||(36734824-36734873)
chr4 (84-133)||(44319881-44319929)
chr4 (84-133)||(51555957-51556006)
chr4 (84-132)||(11389457-11389505)
chr4 (97-133)||(20936092-20936128)
chr4 (84-132)||(23503490-23503538)
chr4 (89-133)||(25487635-25487679)
chr4 (84-128)||(40709475-40709519)
chr4 (84-132)||(41050627-41050675)
chr4 (84-132)||(41088315-41088363)
chr4 (91-127)||(45128406-45128442)
chr4 (97-133)||(54277404-54277440)
[»] chr3 (18 HSPs)
chr3 (70-133)||(1395588-1395651)
chr3 (84-130)||(16790181-16790227)
chr3 (84-133)||(41028941-41028990)
chr3 (85-133)||(20192696-20192744)
chr3 (69-133)||(34318004-34318068)
chr3 (84-133)||(905060-905109)
chr3 (75-132)||(2128342-2128399)
chr3 (71-132)||(22214772-22214833)
chr3 (84-133)||(23793520-23793568)
chr3 (85-130)||(31053183-31053228)
chr3 (84-133)||(38462212-38462261)
chr3 (84-133)||(44374734-44374783)
chr3 (85-122)||(48597690-48597727)
chr3 (84-133)||(49587006-49587054)
chr3 (85-133)||(24605106-24605154)
chr3 (84-132)||(31364832-31364880)
chr3 (7-59)||(34610942-34610993)
chr3 (85-133)||(42039091-42039139)
[»] scaffold0549 (2 HSPs)
scaffold0549 (84-132)||(1815-1863)
scaffold0549 (84-132)||(3905-3953)
[»] scaffold0053 (1 HSPs)
scaffold0053 (85-133)||(20111-20159)
[»] scaffold0654 (1 HSPs)
scaffold0654 (84-119)||(6741-6776)
[»] scaffold0147 (1 HSPs)
scaffold0147 (67-130)||(5016-5079)
[»] scaffold0014 (1 HSPs)
scaffold0014 (84-119)||(116660-116695)
[»] scaffold0024 (2 HSPs)
scaffold0024 (90-136)||(23848-23894)
scaffold0024 (85-175)||(27508-27593)


Alignment Details
Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 7119998 - 7120222
Alignment:
Q  1 aaacgcttatcatgataagcgtttatgttataacctgcagactaagttgttaatccaaaccagggggtataagcgcttatggaataagtgcttatatata 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7119998 aaacacttatcatgataagcgtttatgttataacctgcagactaagttgttaatccaaaccagggggtataagcgcttatggtataagtgcttatatata 7120097  T
Q  101 aactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataagctgtcctagagagctgcctgaaat 200  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7120098 aactatttatataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataagctgtcctagagagctgcctgaaat 7120197  T
Q  201 aaactaatgagtgatggacatgtca 225  Q
    || ||||||||| ||||||||||||    
T  7120198 aagctaatgagtaatggacatgtca 7120222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 870962 - 871025
Alignment:
Q  70 taagcgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||   |||||||||||| |||||||||||| ||||||||||||| |||| |||||    
T  870962 taagcgcttatcatataagtgcttatgtataaactatttttataacaaaagataaaattaagtc 871025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 46499993 - 46499944
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| ||||| |||||||||||| ||||||| ||||||||||    
T  46499993 ataagtgcttatctataagctatttctataagaaaagataaaataaagtc 46499944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 7137140 - 7137092
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||| ||||||||||||||||||| ||||||||||| | |||||||||    
T  7137140 ataagcgcttatatataaactatttttataacaaaagttaaaataaagt 7137092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 37176008 - 37175960
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||| |||||||||||||||||||||||| |||| | ||||||||||    
T  37176008 taagtgattatatataaactatttctataaccaaaggtaaaataaagtc 37175960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 127
Target Start/End: Original strand, 6659634 - 6659677
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaat 127  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||    
T  6659634 ataagtgcttatgtataaactatttctatagcaaaagataaaat 6659677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 7028228 - 7028271
Alignment:
Q  89 tgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||    
T  7028228 tgcttatgtataaactatttctatagcaaaagataaaataaagt 7028271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 4025029 - 4025075
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    |||| ||||||| |||||||||||||| ||||||||||| |||||||    
T  4025029 ataaatgcttatttataaactatttctgtaacaaaagatgaaataaa 4025075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 13037795 - 13037833
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagat 122  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  13037795 ataagtgcttatgtataagctatttctataacaaaagat 13037833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 17420117 - 17420183
Alignment:
Q  67 gtataagcgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||||    |||||| ||||| |||||||||||| ||||| ||||||| ||||||||||    
T  17420117 gtataagcgcttagcacataagtacttatgtataaactatttttataagaaaagataaaataaagtc 17420183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 36641813 - 36641855
Alignment:
Q  91 cttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||  ||||||||||||||||||| ||||||||||    
T  36641813 cttatatataagttatttctataacaaaagataaaataaagtc 36641855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 37591367 - 37591409
Alignment:
Q  88 gtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    |||||||| |||||||||||||||||| ||||||| |||||||    
T  37591367 gtgcttatgtataaactatttctataataaaagataaaataaa 37591409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 45769882 - 45769836
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    |||||||||||| | |||| ||||||||||||||||||| |||||||    
T  45769882 ataagtgcttatgtgtaaattatttctataacaaaagataaaataaa 45769836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 50319230 - 50319272
Alignment:
Q  91 cttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||| ||||| |||||||||||||||||||| ||||||||||    
T  50319230 cttatgtataagctatttctataacaaaagataaaataaagtc 50319272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 6981423 - 6981472
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||| ||||||||||| |||||||||||||||| || ||| ||||||    
T  6981423 ataagtgtttatatataaattatttctataacaaaaaataaaacaaagtc 6981472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 15579415 - 15579460
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    ||||||||||| ||||| ||||||||||||| |||| |||||||||    
T  15579415 taagtgcttatgtataagctatttctataactaaagttcaaataaa 15579460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 136
Target Start/End: Complemental strand, 17631221 - 17631188
Alignment:
Q  103 ctatttctataacaaaagatcaaataaagtctaa 136  Q
    |||||||||||||||||||| |||||||||||||    
T  17631221 ctatttctataacaaaagataaaataaagtctaa 17631188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 24702192 - 24702241
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||| | ||||| ||||||||||||||||| || ||||||||||    
T  24702192 ataagtgcttctctataagctatttctataacaaaaaattaaataaagtc 24702241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 45999427 - 45999378
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||| || ||||| |||||||||||||||||||| | ||||||||    
T  45999427 ataagtgctcatgtataagctatttctataacaaaagataagataaagtc 45999378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 4200161 - 4200209
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||| ||||||||||  ||||| ||||||||||||| ||||||||||    
T  4200161 taagtgtttatatataagttatttttataacaaaagataaaataaagtc 4200209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 4276762 - 4276726
Alignment:
Q  97 tataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||||||||||||||||| | ||||||||    
T  4276762 tataaactatttctataacaaaagataatataaagtc 4276726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 4549797 - 4549845
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||| ||||||| || || |||||||||||||||||||| |||||||||    
T  4549797 ataaatgcttatgtacaagctatttctataacaaaagataaaataaagt 4549845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 26184683 - 26184731
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||| ||||| |||||||||||||||||| ||||| | ||||||||||    
T  26184683 taagtacttatgtataaactatttctataagaaaaggtaaaataaagtc 26184731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 38651547 - 38651499
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||| ||||| ||| |||||||||||||||| || |||||||    
T  38651547 taagtgcttatgtataagctaattctataacaaaagataaactaaagtc 38651499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 50240975 - 50241015
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatca 124  Q
    |||||||||||||||||| || |||||||||||| ||||||    
T  50240975 ataagtgcttatatataagctttttctataacaagagatca 50241015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 3e-16; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 35095936 - 35095873
Alignment:
Q  70 taagcgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||   |||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  35095936 taagcgcttatcatataagtgcttatatttaaactatttctataacaaaagataaaataaagtc 35095873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 191
Target Start/End: Complemental strand, 28586897 - 28586803
Alignment:
Q  92 ttatatataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataagctgtcctagagagct 191  Q
    |||| |||| ||||||||||||||||||||| ||||||||     || |||| |||||||||||||||||||||||||  |  |||| ||||||||||||    
T  28586897 ttatgtatacactatttctataacaaaagataaaataaag-----tcaaactgttttcatataaattataagctgttttgacgagctatcctagagagct 28586803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 37063213 - 37063164
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||||||||    
T  37063213 ataaatgcttatgtataaactatttctataacaaaagataaaataaagtc 37063164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 7096264 - 7096217
Alignment:
Q  86 aagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  7096264 aagtgcttatgtataagctatttctataacaaaagataaaataaagtc 7096217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 20982274 - 20982225
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| ||||| |||||||||||||||| ||| ||||||||||    
T  20982274 ataagtgcttatgtataagctatttctataacaaaggataaaataaagtc 20982225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 26516214 - 26516275
Alignment:
Q  69 ataagcgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    ||||||||||||   |||||||||||| ||||| ||||||||| |||||||||| |||||||    
T  26516214 ataagcgcttatcatataagtgcttatgtataagctatttctaaaacaaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 34975312 - 34975357
Alignment:
Q  87 agtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||| |||| |||||||||||||||||||||||||| |||||||||    
T  34975312 agtgattatgtataaactatttctataacaaaagatgaaataaagt 34975357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 35963164 - 35963225
Alignment:
Q  69 ataagcgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    ||||||| ||||  ||||||||||| | |||||| ||||||||||| |||||||||||||||    
T  35963164 ataagcgattatcaaataagtgcttgtgtataaattatttctataagaaaagatcaaataaa 35963225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 9202887 - 9202839
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||||||||||||||| |||||||| || |||||||| |||||||||    
T  9202887 ataagtgcttatatataagctatttctgtagcaaaagataaaataaagt 9202839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 13224362 - 13224406
Alignment:
Q  86 aagtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    |||||||||| ||||| |||||||||||||||||||| |||||||    
T  13224362 aagtgcttatgtataagctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 19177410 - 19177462
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtctaa 136  Q
    |||||||||||| ||||||||||||||| |||| ||||| |||| ||||||||    
T  19177410 ataagtgcttatgtataaactatttctacaacagaagataaaattaagtctaa 19177462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 132
Target Start/End: Original strand, 7853602 - 7853637
Alignment:
Q  97 tataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||||||||||||||||||||||| |||||||||    
T  7853602 tataaactatttctataacaaaagataaaataaagt 7853637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 19438264 - 19438213
Alignment:
Q  69 ataagcgcttatggaataagtgcttatatataaactatttctataacaaaag 120  Q
    |||| ||||||| | | ||||||||||||||||| |||||||||||||||||    
T  19438264 ataaacgcttatcgtacaagtgcttatatataaaatatttctataacaaaag 19438213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 191
Target Start/End: Complemental strand, 38047986 - 38047892
Alignment:
Q  92 ttatatataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataagctgtcctagagagct 191  Q
    |||| ||||| |||| ||| ||||||||||| |||||||||| |||     |||||||||||| | |||| ||||||| |||||||| |||| |||||||    
T  38047986 ttatgtataagctatatctctaacaaaagataaaataaagtcaaat-----tattttcatatatactatatgctgttttcataagctatcctggagagct 38047892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 6593237 - 6593279
Alignment:
Q  90 gcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||| ||||||| |||||||||||||||||| |||||||||    
T  6593237 gcttatgtataaacaatttctataacaaaagataaaataaagt 6593279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 133
Target Start/End: Original strand, 10303747 - 10303781
Alignment:
Q  99 taaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||||||||||||||| ||||||||||    
T  10303747 taaactatttctataacaaaagataaaataaagtc 10303781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 39919785 - 39919739
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    |||||||||||| ||||| ||| |||||||||||||||| |||||||    
T  39919785 ataagtgcttatgtataagctaattctataacaaaagattaaataaa 39919739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 465892 - 465933
Alignment:
Q  91 cttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||||||||| |||||||||| ||||||||| |||||||||    
T  465892 cttatatataagctatttctatgacaaaagataaaataaagt 465933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 11095608 - 11095559
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||| |||| |||||||||||||||||||||| |||  |||||||||    
T  11095608 ataagtgattatgtataaactatttctataacaaatgatacaataaagtc 11095559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 29588811 - 29588856
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataa 129  Q
    |||||||||||| ||||| ||||||||||||||||| || ||||||    
T  29588811 ataagtgcttatgtataagctatttctataacaaaatataaaataa 29588856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 35135801 - 35135752
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||| |||| |||||  ||||||||||||||||||| ||||||||||    
T  35135801 ataagtgtttatgtataagatatttctataacaaaagataaaataaagtc 35135752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 39128574 - 39128619
Alignment:
Q  88 gtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||| ||||| ||| |||||||||||||||| ||||||||||    
T  39128574 gtgcttatgtataagctaattctataacaaaagataaaataaagtc 39128619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 11835208 - 11835256
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||||| |||| ||||||| |||| ||||||||||||| |||||||||    
T  11835208 ataagtgtttatgtataaaccatttttataacaaaagataaaataaagt 11835256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 12407792 - 12407752
Alignment:
Q  92 ttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  12407792 ttatgtataagctatttctataacaaaagataaaataaagt 12407752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 19460053 - 19460101
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||||||||| |||| |||| || ||||||||||||| |||||||||    
T  19460053 ataagtgcttatctatacactacttttataacaaaagataaaataaagt 19460101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 29281087 - 29281131
Alignment:
Q  75 gcttatggaataagtgcttatatataaactatttctataacaaaa 119  Q
    |||||| | |||||| |||||||||||||||||| ||||||||||    
T  29281087 gcttatcgtataagtacttatatataaactatttttataacaaaa 29281131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 32172569 - 32172633
Alignment:
Q  69 ataagcgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||||   | ||| |||||| ||||||||||||||| |||||||||| |||| |||||    
T  32172569 ataagcgcttatcatacaagagcttatgtataaactatttctacaacaaaagataaaatgaagtc 32172633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 33459078 - 33459026
Alignment:
Q  80 tggaataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||||| ||||||| |||||  ||||||||||||||||||  |||||||||    
T  33459078 tggaataaatgcttatgtataagttatttctataacaaaagacaaaataaagt 33459026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 34690806 - 34690854
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||| ||||| ||||  |||||||||||||||||||| ||||||||||    
T  34690806 taagtccttatgtatacgctatttctataacaaaagataaaataaagtc 34690854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 40048419 - 40048371
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||||||||| |||||  | ||||||||||||||||| |||||||||    
T  40048419 ataagtgcttatgtataagttgtttctataacaaaagataaaataaagt 40048371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 14482133 - 14482182
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  14482133 ataagtgcttatgtataaactatttctataacaaaagataaaataaagtc 14482182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 191
Target Start/End: Original strand, 4558730 - 4558831
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataagctgtccta 184  Q
    |||||| |||| ||||| |||||||||||| ||||||| |||||||||  |||     ||||||||||||   |||||||||||| |||||||| |||||    
T  4558730 taagtgtttatgtataagctatttctataataaaagataaaataaagttaaat-----tattttcatatatgctataagctgtttccataagctatccta 4558824  T
Q  185 gagagct 191  Q
    |||||||    
T  4558825 gagagct 4558831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 35535000 - 35534951
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||||||||| |||||||||||| ||||| | ||||||||||    
T  35535000 ataagtgcttatatataagctatttctataataaaagttaaaataaagtc 35534951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 39392800 - 39392751
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||  ||| |||||||||||||||||||||||||| ||||||||||    
T  39392800 ataagtggctatgtataaactatttctataacaaaagataaaataaagtc 39392751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 42597323 - 42597380
Alignment:
Q  75 gcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||||  |||||| ||||| ||||| |||||||||||||||||||| |||||||||    
T  42597323 gcttatgctataagtacttatgtataagctatttctataacaaaagataaaataaagt 42597380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 1666976 - 1667024
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||||| |||||||||| |||||| ||||||||||| |||||||||||    
T  1666976 ataagtgtttatatataagctatttttataacaaaaggtcaaataaagt 1667024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 8823531 - 8823483
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||||||||| | |||||||||||||||||| ||| ||||||    
T  8823531 taagtgcttatatataagccatttctataacaaaagataaaacaaagtc 8823483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 26215427 - 26215475
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||| |||||| ||||| |||||||||||||||||||| |||||||||    
T  26215427 ataagcgcttatgtataagctatttctataacaaaagataaaataaagt 26215475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 29973013 - 29973112
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataagctgtccta 184  Q
    ||||||||||||||||| |||||||| ||||| ||| | ||||||||     || ||||||||||| ||||  |||||| ||||| |||||||| ||||     
T  29973013 taagtgcttatatataagctatttctttaacacaaggtaaaataaag-----tcaaactattttcacataagctataagttgttttcataagctatcctt 29973107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 34770824 - 34770923
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataagctgtccta 184  Q
    ||||||||||| || |||||||||| || ||||||||| |||||||||| |||     | ||||||| |||  |||||| ||||| |||||||| |||||    
T  34770824 taagtgcttatgtaaaaactatttccattacaaaagataaaataaagtcaaat-----tgttttcatttaagctataagttgttttcataagctatccta 34770918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 10075639 - 10075588
Alignment:
Q  140 aactattttcatataaattataagctgtttgcataagctgtcctagagagct 191  Q
    ||||||||| |||||| ||||||||| ||| |||||||| ||||||||||||    
T  10075639 aactatttttatataagttataagctattttcataagctatcctagagagct 10075588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 25867007 - 25867066
Alignment:
Q  75 gcttatggaataagtgcttatatataaa-ctatttctataacaaaagatcaaataaagtc 133  Q
    |||||| | ||||||||||| || |||| |||||||||||||||||||| ||||||||||    
T  25867007 gcttatagcataagtgcttacatctaaagctatttctataacaaaagatgaaataaagtc 25867066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 113
Target Start/End: Original strand, 8060584 - 8060622
Alignment:
Q  75 gcttatggaataagtgcttatatataaactatttctata 113  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  8060584 gcttatggtataagtgcttatatataagctatttctata 8060622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 175
Target Start/End: Complemental strand, 10076359 - 10076329
Alignment:
Q  145 ttttcatataaattataagctgtttgcataa 175  Q
    |||||||||||||||||||||||||||||||    
T  10076359 ttttcatataaattataagctgtttgcataa 10076329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 191
Target Start/End: Complemental strand, 39268636 - 39268541
Alignment:
Q  92 ttatatataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataagctgtcctagagagct 191  Q
    |||| ||| ||||||||||||||||| |||| |||||||    | |  || ||||||||||||| ||| ||||||||| |||||||| | ||||||||||    
T  39268636 ttatgtatcaactatttctataacaacagataaaataaa----agttcaattattttcatataagttaaaagctgttttcataagcttttctagagagct 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 10114421 - 10114466
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataa 129  Q
    |||||||||||| ||||| ||||||||||| |||||||| ||||||    
T  10114421 ataagtgcttatgtataagctatttctatagcaaaagataaaataa 10114466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 34563181 - 34563230
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||||||||||  ||||||||| ||||| ||| ||||||||||    
T  34563181 ataagtgcttatatataagttatttctatgacaaaggataaaataaagtc 34563230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 38036266 - 38036205
Alignment:
Q  69 ataagcgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    ||||||||||||   |||||||||||| |||||||||||| | |||||||| || |||||||    
T  38036266 ataagcgcttattctataagtgcttatgtataaactatttatttaacaaaaaataaaataaa 38036205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 40356802 - 40356851
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| ||||| |||||| ||||| ||||||| ||||||||||    
T  40356802 ataagtgcttatctataagctatttatataataaaagataaaataaagtc 40356851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 2213179 - 2213131
Alignment:
Q  12 atgataagcgtttatgttataacctgcagactaagttgttaatccaaac 60  Q
    ||||||||||||| ||||||||| |||| | ||||||||| ||||||||    
T  2213179 atgataagcgtttgtgttataacatgcaaaataagttgtttatccaaac 2213131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 35453762 - 35453714
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||| ||||||||||| || |||||| |||||||||| |||||||||    
T  35453762 ataagtacttatatataatctgtttctacaacaaaagataaaataaagt 35453714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 37353387 - 37353340
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||| |||||| || ||||||||||||||||||||||| |||||||||    
T  37353387 ataagcgcttatgtacaaactatttctataacaaaagat-aaataaagt 37353340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 24774690 - 24774738
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||    
T  24774690 taagtgcttatatataaactatttctataacaaaatataaaataaagtc 24774738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 4248889 - 4248938
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  4248889 ataagtgcttatatataagctatttcaataacaaaagataaaataaagtc 4248938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 7354148 - 7354221
Alignment:
Q  97 tataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataa 175  Q
    |||||||||||||||||||||||||| ||||||     |||| ||||||||||||||||  || ||||||||| |||||    
T  7354148 tataaactatttctataacaaaagataaaataa-----aatcgaactattttcatataagatacaagctgttttcataa 7354221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 31461593 - 31461647
Alignment:
Q  68 tataagcgcttatggaataagtgcttatatataaactatttctataacaaaagat 122  Q
    ||||||| ||||| | |||||||||||| ||||| ||||||||||||||||||||    
T  31461593 tataagcacttattgtataagtgcttatgtataagctatttctataacaaaagat 31461647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 507154 - 507199
Alignment:
Q  87 agtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||||||| |||||| ||||||||||||||||||| |||||||||    
T  507154 agtgcttatgtataaattatttctataacaaaagataaaataaagt 507199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 264302 - 264350
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||||||||||||||| ||||||||| | |||||||| |||||||||    
T  264302 ataagtgcttatatataagctatttctaaagcaaaagataaaataaagt 264350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 2514634 - 2514682
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||| ||||| |||||||||||| ||||||| ||||||||||    
T  2514634 taagtgcttatgtataagctatttctataataaaagataaaataaagtc 2514682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 10452496 - 10452413
Alignment:
Q  87 agtgcttatatataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataa 175  Q
    ||||||||| ||||| ||||||||||||||||| || ||||||     |||| ||||||||||||||||  |||||| ||||| |||||    
T  10452496 agtgcttatgtataagctatttctataacaaaatataaaataa-----aatcaaactattttcatataagctataagttgtttccataa 10452413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 11340764 - 11340716
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||||||||||||||||  || |||||||||||||||| |||||||||    
T  11340764 ataagtgcttatatataagataattctataacaaaagataaaataaagt 11340716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 22742282 - 22742346
Alignment:
Q  69 ataagcgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| | |||||| ||||| ||||| |||||| ||||||||| ||| ||||||||||    
T  22742282 ataagcgcttatcgtataagttcttatctataagctatttgtataacaaaggataaaataaagtc 22742346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 33068715 - 33068655
Alignment:
Q  69 ataagcgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataa 129  Q
    ||||||||||||  ||||| ||||||| |||||  ||||||||||||||||||| ||||||    
T  33068715 ataagcgcttatcaaataaatgcttatgtataagttatttctataacaaaagataaaataa 33068655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 33911420 - 33911372
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||||| |||| ||||| |||||| |||||||||||||||||||||||    
T  33911420 ataagtgtttatgtataatctatttttataacaaaagatcaaataaagt 33911372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 13360652 - 13360715
Alignment:
Q  70 taagcgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||   |||||||||||| |  |||||||||||||||||||| || ||||||||||    
T  13360652 taagcgcttatcatataagtgcttatgtgcaaactatttctataacaaaatataaaataaagtc 13360715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 31337939 - 31337986
Alignment:
Q  69 ataagcgcttatggaataagtgcttatatataaactatttctataaca 116  Q
    |||||||||||| | |||||| ||||| ||||||||||||||||||||    
T  31337939 ataagcgcttattgtataagtacttatgtataaactatttctataaca 31337986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 3169384 - 3169338
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    |||||||||||| | ||| |||||||||||||||||||| |||||||    
T  3169384 ataagtgcttatgtgtaacctatttctataacaaaagatgaaataaa 3169338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 119
Target Start/End: Original strand, 30533573 - 30533607
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaa 119  Q
    ||||||||||||||||||||||||||||| |||||    
T  30533573 taagtgcttatatataaactatttctatagcaaaa 30533607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 4247144 - 4247103
Alignment:
Q  145 ttttcatataaattataagctgtttgcataagctgtcctaga 186  Q
    ||||||||||| ||||||||||||| |||||| |||||||||    
T  4247144 ttttcatataagttataagctgttttcataagttgtcctaga 4247103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 4247772 - 4247735
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagat 122  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  4247772 taagtgcttatgtataagctatttctataacaaaagat 4247735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 29269827 - 29269876
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||| ||||| | |||||||||||||||||||| ||||| ||||||||||    
T  29269827 ataaatgcttgtgtataaactatttctataacagaagataaaataaagtc 29269876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 33925669 - 33925722
Alignment:
Q  69 ataagcgcttatggaataagtgcttatatataaactatttctataacaaaagat 122  Q
    |||||| ||||||| ||||||||   ||||||| ||||||||||||||||||||    
T  33925669 ataagcacttatggtataagtgcggttatataagctatttctataacaaaagat 33925722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 2456884 - 2456931
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||| ||||||||||||| ||||| |||||| ||||||||||    
T  2456884 taagtgcttatgtataaactatttcgataac-aaagataaaataaagtc 2456931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 8349803 - 8349755
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||||| || | |||||||||||||| ||||||||||| |||||||||    
T  8349803 ataagtgtttgtgtataaactatttctctaacaaaagataaaataaagt 8349755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 14706691 - 14706739
Alignment:
Q  69 ataagcgcttatggaataagtgcttatatataaactatttctataacaa 117  Q
    ||||||||||||  |||||||||||||  ||||||||||||| ||||||    
T  14706691 ataagcgcttatcaaataagtgcttatgaataaactatttctttaacaa 14706739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 29274363 - 29274319
Alignment:
Q  89 tgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||| ||||| ||||||||||| |||||||| ||||||||||    
T  29274363 tgcttatgtataagctatttctatagcaaaagataaaataaagtc 29274319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 14278047 - 14277984
Alignment:
Q  70 taagcgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||| || |||||||||||| ||||||||||||||||||| ||| || ||||||||||    
T  14278047 taagcgcttacggtataagtgcttatgtataaactatttctataactaaacattaaataaagtc 14277984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 17952840 - 17952746
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataagctgtcct 183  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||||||     || ||||||||||||||||  || ||| ||||| |||||||| ||||    
T  17952840 ataagagcttatatataagctatttctataacaaaagataaaataaag-----tcaaactattttcatataagctacaagatgttttcataagctatcct 17952746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 31461369 - 31461418
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  31461369 ataagtggttatatataagctatttctataacaaaagataaaataaagtc 31461418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 32098442 - 32098398
Alignment:
Q  89 tgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  32098442 tgcttatatataagctatttctataacaaaagataaaataaagtc 32098398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 33192126 - 33192173
Alignment:
Q  86 aagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  33192126 aagtgcttatataaaaactatttctataacataagataaaataaagtc 33192173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 12215741 - 12215787
Alignment:
Q  87 agtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  12215741 agtgcttatgtataaactatttctacaacaaaagataaaataaagtc 12215787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 32694151 - 32694240
Alignment:
Q  92 ttatatataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataagctgtcctaga 186  Q
    |||| ||||| ||||||||||| |||||||| |||||||     |||  |||||||| |||||| ||||||| |||||||||||||| |||||||    
T  32694151 ttatgtataagctatttctatatcaaaagataaaataaa-----atcagactatttttatataatttataagttgtttgcataagctatcctaga 32694240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 133
Target Start/End: Original strand, 10143095 - 10143152
Alignment:
Q  76 cttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||| |||||||||||||| |||||  ||||||||||||||||||| |||| |||||    
T  10143095 cttatcgaataagtgcttatgtataagttatttctataacaaaagataaaattaagtc 10143152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 25609727 - 25609776
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| ||||| |||||||||||| ||||||| ||||||||||    
T  25609727 ataagtgcttatgtataagctatttctataagaaaagataaaataaagtc 25609776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 26522762 - 26522725
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagat 122  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  26522762 taagtgcttatgtataaactatttctataacaaaagat 26522725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 28803645 - 28803596
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||||||||||  |||||| |||||||||||| ||||||||||    
T  28803645 ataagtgcttatatataagttatttcgataacaaaagataaaataaagtc 28803596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 33197378 - 33197329
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| ||||| ||||||||||||||||||||  |||||||||    
T  33197378 ataagtgcttatctataagctatttctataacaaaagatagaataaagtc 33197329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 191
Target Start/End: Complemental strand, 35099726 - 35099636
Alignment:
Q  97 tataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataagctgtcctagagagct 191  Q
    |||||||| ||||||||||||||||| ||||||| || |    ||||||||||||  || |||||||||| || |||||||| |||| |||||||    
T  35099726 tataaactgtttctataacaaaagataaaataaaatcaa----aactattttcattaaagttataagctgctttcataagctatccttgagagct 35099636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 28933755 - 28933858
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataagctgtcct 183  Q
    ||||||||| || ||||| |||||| ||||||||||||| |||| || || |||     ||||||||| ||| ||||||  ||||| |||||||| ||||    
T  28933755 ataagtgctcatgtataagctatttatataacaaaagataaaatcaaatcaaat-----tattttcatttaagttataaattgttttcataagctatcct 28933849  T
Q  184 agagagctg 192  Q
    |||||||||    
T  28933850 agagagctg 28933858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 1493652 - 1493601
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtcta 135  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||||||||    
T  1493652 ataattgcttatttataaactctttctataacaatagataaaataaagtcta 1493601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 34055040 - 34054993
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaag 131  Q
    |||||||||||| ||||  |||||||||||||||||||| ||||||||    
T  34055040 ataagtgcttatgtataggctatttctataacaaaagataaaataaag 34054993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 5133708 - 5133750
Alignment:
Q  89 tgcttatatataaactatttctataacaaaagatcaaataaag 131  Q
    ||||||| ||||| |||||||||||||||||||| ||||||||    
T  5133708 tgcttatgtataagctatttctataacaaaagataaaataaag 5133750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 7936957 - 7936995
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagat 122  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  7936957 ataagtgcttatgtataaaccatttctataacaaaagat 7936995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 10190210 - 10190256
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    |||||||||||| |||||||||||| ||||||||| ||| |||||||    
T  10190210 ataagtgcttatgtataaactatttttataacaaaggataaaataaa 10190256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 12785814 - 12785860
Alignment:
Q  83 aataagtgcttatatataaactatttctataacaaaagatcaaataa 129  Q
    ||||||||||||| ||| | |||||||||||||||||||| ||||||    
T  12785814 aataagtgcttatgtatgatctatttctataacaaaagattaaataa 12785860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 37033982 - 37034024
Alignment:
Q  91 cttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||    
T  37033982 cttatgtataaactatttctataaaaaaagataaaataaagtc 37034024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 42974286 - 42974332
Alignment:
Q  87 agtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||| | |||||||||||||||||||||||| ||| ||||||||    
T  42974286 agtgcttgtgtataaactatttctataacaaaaggtcatataaagtc 42974332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 9878816 - 9878775
Alignment:
Q  89 tgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    |||||||||| || |||||||||||||||||||| |||||||    
T  9878816 tgcttatataaaagctatttctataacaaaagataaaataaa 9878775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 13864581 - 13864630
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||| |||| ||||| |||||||||||||||||| | ||||||||||    
T  13864581 ataagtgtttatgtataagctatttctataacaaaaggtaaaataaagtc 13864630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 34339054 - 34339103
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| |||||||| |||||||| | |||||| ||||||||||    
T  34339054 ataagtgcttatgtataaactttttctatagctaaagataaaataaagtc 34339103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 37053525 - 37053574
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| |||| ||||||||||||||| || || ||||||||||    
T  37053525 ataagtgcttatgtatagactatttctataacagaaaataaaataaagtc 37053574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 41033088 - 41033051
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagat 122  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  41033088 taagtgcttatgtataagctatttctataacaaaagat 41033051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 4026748 - 4026796
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||||||||| ||||| |||||| |||| |||||||| |||||||||    
T  4026748 ataagtgcttatctataagctatttttatagcaaaagataaaataaagt 4026796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 5045295 - 5045247
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||| |||| ||||| |||||| ||||||||||||| ||||||||||    
T  5045295 taagtgtttatgtataagctatttttataacaaaagataaaataaagtc 5045247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 5998833 - 5998793
Alignment:
Q  92 ttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||||||| |||||| ||||||||||||| |||||||||    
T  5998833 ttatatataagctatttttataacaaaagataaaataaagt 5998793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 13866825 - 13866869
Alignment:
Q  89 tgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||| ||||||||||||||||| |||||||| |||| |||||    
T  13866825 tgcttatgtataaactatttctatagcaaaagataaaattaagtc 13866869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 36114350 - 36114398
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||||||||||||| | |||||| ||| ||||||||| |||||||||    
T  36114350 ataagtgcttatatattagctatttttatgacaaaagataaaataaagt 36114398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 36114662 - 36114614
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||||||||||  |||| ||| |||||||||||||||| |||||||||    
T  36114662 ataagtgcttatgcataacctagttctataacaaaagataaaataaagt 36114614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 38239689 - 38239641
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||| |||| ||||| |||||||||||||||||||| |||| |||||    
T  38239689 taagtgtttatgtataagctatttctataacaaaagataaaatcaagtc 38239641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 41809377 - 41809345
Alignment:
Q  89 tgcttatatataaactatttctataacaaaaga 121  Q
    ||||||| |||||||||||||||||||||||||    
T  41809377 tgcttatgtataaactatttctataacaaaaga 41809345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 178
Target Start/End: Original strand, 27492726 - 27492815
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataagct 178  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||||     |||| |||| ||||||||||| | ||||| ||||| ||||||||    
T  27492726 ataagttcttatgtataaactatttctataacaaaagttcaaataa-----aatcaaacttttttcatataagtaataagatgttttcataagct 27492815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 47006979 - 47007025
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||    
T  47006979 ataagtgcttatgtataaactttttctataacaaaagatcaaataaa 47007025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 5269454 - 5269510
Alignment:
Q  77 ttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||| ||||||||||||||||||| ||||||| ||| ||||||| ||||||||||    
T  5269454 ttatggcataagtgcttatatataaattatttctttaataaaagataaaataaagtc 5269510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 42656453 - 42656500
Alignment:
Q  91 cttatatataaactatttctataacaaaagatcaaataaagtctaatc 138  Q
    ||||||||||| |||||||||||||||||||| |||||||||| ||||    
T  42656453 cttatatataagctatttctataacaaaagataaaataaagtcaaatc 42656500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 178
Target Start/End: Original strand, 47004018 - 47004107
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataagct 178  Q
    ||||||| |||||| ||| ||||||||||||||| |||| ||||||||     || ||||||||| |||| || |||||||||||| ||||||||    
T  47004018 ataagtgtttatatgtaagctatttctataacaatagataaaataaag-----tcaaactatttttatatgaactataagctgttttcataagct 47004107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 30496635 - 30496684
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||| |||| ||||||||||||||||||||||| || ||||||||||    
T  30496635 ataagtgtttatgtataaactatttctataacaaaatataaaataaagtc 30496684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 5373157 - 5373205
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||| ||||  |||||||||||||||||||| ||||||||||    
T  5373157 taagtgcttatgtatatgctatttctataacaaaagataaaataaagtc 5373205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 33894555 - 33894599
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataa 129  Q
    ||||||||||| ||||| |||||||||||||||||||| ||||||    
T  33894555 taagtgcttatgtataagctatttctataacaaaagataaaataa 33894599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 45813333 - 45813270
Alignment:
Q  70 taagcgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||| ||||| | ||| |||||||| ||||| ||||||||||| |||||||| ||||||||||    
T  45813333 taagcacttatagcataggtgcttatttataagctatttctataccaaaagataaaataaagtc 45813270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 46081950 - 46082050
Alignment:
Q  70 taagcgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgttt 169  Q
    |||||| |||| | ||||||| |||||||||| ||||||||||||| |||| | ||| |||||| |    |||| ||||||||||| ||||||| |||||    
T  46081950 taagcgtttattgtataagtgattatatataagctatttctataacgaaagttaaaacaaagtcaa----aactgttttcatataagttataagttgttt 46082045  T
Q  170 gcata 174  Q
     ||||    
T  46082046 tcata 46082050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 24973875 - 24973921
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    |||||||||||| || || |||||||||||||||||||| |||||||    
T  24973875 ataagtgcttatgtaaaagctatttctataacaaaagataaaataaa 24973921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 178
Target Start/End: Original strand, 27548194 - 27548283
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataagct 178  Q
    |||||||||||| ||||| |||||||  || |||||||| ||||||||||||||     | ||||||| |||  |||||||||||| ||||||||    
T  27548194 ataagtgcttatctataagctatttccttagcaaaagataaaataaagtctaat-----tgttttcatttaagctataagctgttttcataagct 27548283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 31002693 - 31002782
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataagctg 179  Q
    ||||||||||| ||||||||||||| |  ||||||||| ||||||||     || || |||||||||||||  ||||||||||||  ||||||||    
T  31002693 taagtgcttatgtataaactatttcaaccacaaaagataaaataaag-----tcaaaatattttcatataagctataagctgttttgataagctg 31002782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 1417203 - 1417244
Alignment:
Q  92 ttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||| |||||||||||| ||||||||||||| ||||||||||    
T  1417203 ttatgtataaactatttatataacaaaagataaaataaagtc 1417244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 1423070 - 1423123
Alignment:
Q  77 ttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    |||||||||||||| |||| ||||| ||||||  |||||||||||| |||||||    
T  1423070 ttatggaataagtgattatgtataagctattttcataacaaaagataaaataaa 1423123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 3241372 - 3241421
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||||||| || ||||||||||||||||| |  ||||||||||    
T  3241372 ataagtgcttatatagaagctatttctataacaaaataaaaaataaagtc 3241421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 7244633 - 7244682
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| ||||| ||||||||||| |||||||| ||| ||||||    
T  7244633 ataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtc 7244682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 7274394 - 7274438
Alignment:
Q  86 aagtgcttatatataaactatttctataacaaaagatcaaataaag 131  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||    
T  7274394 aagtgcttatatataaactatttctacaac-aaagataaaataaag 7274438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 46213734 - 46213783
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| || || ||||||||||||||||| || ||||||||||    
T  46213734 ataagtgcttatgtaaaagctatttctataacaaaatataaaataaagtc 46213783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 2999139 - 2999171
Alignment:
Q  101 aactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||||||||||||| ||||||||||    
T  2999139 aactatttctataacaaaagataaaataaagtc 2999171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 5276156 - 5276204
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||| ||||| |||||| ||||||||||||| | ||||||||    
T  5276156 taagtgcttatgtataagctatttttataacaaaagataacataaagtc 5276204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 15328537 - 15328585
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||||||||||  |||| |||||||||||| ||||||| |||||||||    
T  15328537 ataagtgcttatgcataatctatttctataataaaagataaaataaagt 15328585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 25511571 - 25511607
Alignment:
Q  97 tataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  25511571 tataaattatttctataacaaaagatgaaataaagtc 25511607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 28178913 - 28178949
Alignment:
Q  97 tataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  28178913 tataagctatttctataacaaaagataaaataaagtc 28178949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 31341130 - 31341174
Alignment:
Q  89 tgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||| ||||| |||||| ||||||||||||| ||||||||||    
T  31341130 tgcttatgtataagctatttgtataacaaaagataaaataaagtc 31341174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 37832278 - 37832230
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||||||| | ||||||||||||||||| ||||| || |||||||||    
T  37832278 ataagtgcttgtgtataaactatttctatagcaaaatataaaataaagt 37832230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 1213 - 1164
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  1213 ataagtgcttatgtataagctatttctataacaaaagataaaataaagtc 1164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 2762 - 2811
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  2762 ataagtgcttatgtataagctatttctataacaaaagataaaataaagtc 2811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 21593149 - 21593101
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||||||||    
T  21593149 taagtgcttatgtataaactatttctataactaaagataaaataaagtc 21593101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 4798697 - 4798646
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtctaa 136  Q
    ||||||||||| ||||| ||||||||||| |||||||| |||||||||||||    
T  4798697 taagtgcttatgtataagctatttctatatcaaaagataaaataaagtctaa 4798646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 178
Target Start/End: Complemental strand, 2980610 - 2980516
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataagct 178  Q
    |||||||||||| ||||| ||||||||||||||||| || ||| ||| |  | || ||||||||||||| || ||||||| ||||  ||||||||    
T  2980610 ataagtgcttatgtataagctatttctataacaaaaaatgaaacaaaataaagtcaaactattttcatacaagttataagttgttctcataagct 2980516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 4071814 - 4071862
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  4071814 ataagtgtttatatataa-ctatttctataacaaaagataaaataaagtc 4071862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 47970249 - 47970298
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| ||||| |||||||||||||||||||| |||| |||||    
T  47970249 ataagtgcttatgtataagctatttctataacaaaagataaaatgaagtc 47970298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 54325176 - 54325127
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||| | |||||||||||||||| ||||||||| ||||||||||    
T  54325176 ataagtgcttgtgtataaactatttctattacaaaagataaaataaagtc 54325127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 30338727 - 30338683
Alignment:
Q  88 gtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||    
T  30338727 gtgcttatgtataaactatttctataacaaaagatagaataaagt 30338683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 32066558 - 32066502
Alignment:
Q  74 cgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    ||||||| | |||||||||||| ||||||||| || ||||||||||||| |||||||    
T  32066558 cgcttatcgtataagtgcttatgtataaactacttttataacaaaagataaaataaa 32066502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 51044597 - 51044549
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||| |||| ||||| |||||||||||||||||||| ||||||||||    
T  51044597 taagtgtttatgtataagctatttctataacaaaagataaaataaagtc 51044549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 4471102 - 4471149
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaag 131  Q
    ||||||||||||  ||||||||||| ||||||||||||| ||||||||    
T  4471102 ataagtgcttatgcataaactatttttataacaaaagataaaataaag 4471149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 21683617 - 21683570
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||| |||| |||||||||||||||||||||||||| | |||||||    
T  21683617 taagtgtttatgtataaactatttctataacaaaagataagataaagt 21683570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Original strand, 24929441 - 24929476
Alignment:
Q  101 aactatttctataacaaaagatcaaataaagtctaa 136  Q
    |||||||||||||||||||||| |||||||||||||    
T  24929441 aactatttctataacaaaagataaaataaagtctaa 24929476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 4191670 - 4191708
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagat 122  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  4191670 ataagtgcttatgtataagctatttctataacaaaagat 4191708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 4449230 - 4449185
Alignment:
Q  88 gtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||| ||||||||||||||||| |||||| | ||||||||    
T  4449230 gtgcttatatttaaactatttctataaccaaagataatataaagtc 4449185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 6364087 - 6364128
Alignment:
Q  91 cttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||| ||||| |||||||||||||||||||| |||||||||    
T  6364087 cttatgtataagctatttctataacaaaagataaaataaagt 6364128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 18630611 - 18630660
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||| ||||||  |||||||||||| |||||||||||| ||||||||||    
T  18630611 ataagcgcttatgcataaactatttcaataacaaaagataaaataaagtc 18630660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 132
Target Start/End: Complemental strand, 26520361 - 26520320
Alignment:
Q  91 cttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||| |||||||| ||||||||||||||||| |||||||||    
T  26520361 cttatgtataaactgtttctataacaaaagatgaaataaagt 26520320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 36048731 - 36048779
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| ||||| |||||||||||||||||||| || |||||||    
T  36048731 ataagtgcttat-tataagctatttctataacaaaagataaattaaagtc 36048779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 36734824 - 36734873
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| ||||| || ||||||||||||||| | ||||||||||    
T  36734824 ataagtgcttatgtataatctctttctataacaaaaggtaaaataaagtc 36734873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 44319881 - 44319929
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||| || |||||||||||||||||| ||||||| ||||||||||    
T  44319881 ataagtgctcatgtataaactatttctataa-aaaagataaaataaagtc 44319929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 51556006 - 51555957
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| ||||| |||||  ||||||||||||| ||||||||||    
T  51556006 ataagtgcttatgtataagctattattataacaaaagataaaataaagtc 51555957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 11389457 - 11389505
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||||||||| |||||| ||||||||||| ||||||| || ||||||    
T  11389457 ataagtgcttatgtataaattatttctataaaaaaagataaagtaaagt 11389505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 20936128 - 20936092
Alignment:
Q  97 tataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  20936128 tatagactatttctataacaaaagataaaataaagtc 20936092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 23503490 - 23503538
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||||||||| ||||| ||| ||||||||||||| || |||||||||    
T  23503490 ataagtgcttatgtataatctaattctataacaaaatataaaataaagt 23503538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 25487679 - 25487635
Alignment:
Q  89 tgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||| ||||| ||||||||||||||||| || ||||||||||    
T  25487679 tgcttatgtataagctatttctataacaaaaaataaaataaagtc 25487635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 40709519 - 40709475
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaata 128  Q
    |||||||||||| ||||| || ||||||||||||||||| |||||    
T  40709519 ataagtgcttatttataagctgtttctataacaaaagataaaata 40709475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 41050627 - 41050675
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||||| | || |||||||||||||||||||||||||| |||| ||||    
T  41050627 ataagtgttaatgtataaactatttctataacaaaagatgaaatgaagt 41050675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 41088315 - 41088363
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||||||||| ||||||||||||  | |||||||||| |||||||||    
T  41088315 ataagtgcttatgtataaactattttcacaacaaaagataaaataaagt 41088363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 45128442 - 45128406
Alignment:
Q  91 cttatatataaactatttctataacaaaagatcaaat 127  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  45128442 cttatgtataaactatttctataacaaaagataaaat 45128406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 54277440 - 54277404
Alignment:
Q  97 tataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  54277440 tataaactacttctataacaaaagataaaataaagtc 54277404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 1395588 - 1395651
Alignment:
Q  70 taagcgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||| | | |||||| ||| ||||| |||||||||||||||||||| ||||||||||    
T  1395588 taagcgcttatagcaaaagtgcatatgtataagctatttctataacaaaagataaaataaagtc 1395651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 16790227 - 16790181
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||||    
T  16790227 ataagtgcttatatataagttatttctataacaaaagataaaataaa 16790181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 41028990 - 41028941
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| ||||| |||||||||||||||||||  ||||||||||    
T  41028990 ataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtc 41028941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 20192744 - 20192696
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||| ||||| |||||| ||||||||||||| ||||||||||    
T  20192744 taagtgcttatgtataagctatttatataacaaaagataaaataaagtc 20192696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 34318004 - 34318068
Alignment:
Q  69 ataagcgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||||| || |||||| |  ||||| ||||||||||||||||| || ||||||||||    
T  34318004 ataagcgcttatggtatcagtgctcaagtataagctatttctataacaaaatataaaataaagtc 34318068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 905109 - 905060
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||| |||||  ||||| |||||||||||||||||||| ||||||||||    
T  905109 ataagcgcttaagtataagctatttctataacaaaagataaaataaagtc 905060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 2128399 - 2128342
Alignment:
Q  75 gcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||||| | ||||| | |||| ||||| |||||||||||||||||||| |||||||||    
T  2128399 gcttatagcataagcgtttatgtataagctatttctataacaaaagataaaataaagt 2128342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 22214833 - 22214772
Alignment:
Q  71 aagcgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    |||| ||||| | |||||||| ||| |||||| ||||||||||||||| ||| |||||||||    
T  22214833 aagcacttatcgtataagtgcgtatgtataaattatttctataacaaaggataaaataaagt 22214772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 23793520 - 23793568
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||| ||||||| |||||||||||| ||||||||||||| ||||||||||    
T  23793520 ataattgcttatgtataaactattt-tataacaaaagataaaataaagtc 23793568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 31053228 - 31053183
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    |||| |||||||||||| |||| ||||||||||||||| |||||||    
T  31053228 taagagcttatatataagctatatctataacaaaagataaaataaa 31053183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 38462212 - 38462261
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||| |||| ||||| ||||||||||| |||||||| ||||||||||    
T  38462212 ataagtgtttatttataagctatttctataccaaaagataaaataaagtc 38462261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 44374783 - 44374734
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||| ||||| |||| ||| ||||||||||| ||||||||||    
T  44374783 ataagtgcttatgtataagctatatctttaacaaaagataaaataaagtc 44374734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 48597727 - 48597690
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagat 122  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  48597727 taagtgcttatgtttaaactatttctataacaaaagat 48597690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 49587054 - 49587006
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||||||||  ||||| |||||||||||||||||||| ||||||||||    
T  49587054 ataagtgcttac-tataagctatttctataacaaaagataaaataaagtc 49587006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 24605154 - 24605106
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    |||||| |||| |||||  ||||||||||||||||||| ||||||||||    
T  24605154 taagtgtttatgtataagttatttctataacaaaagatgaaataaagtc 24605106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 31364832 - 31364880
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||||||| |||||||| |||||| ||||||||||| | |||||||||    
T  31364832 ataagtgctaatatataagctatttttataacaaaaggtaaaataaagt 31364880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 34610942 - 34610993
Alignment:
Q  7 ttatcatgataagcgtttatgttataacctgcagactaagttgttaatccaaa 59  Q
    ||||||||||||||| || |||||||| ||||||| ||||||||| |||||||    
T  34610942 ttatcatgataagcgcttgtgttataagctgcaga-taagttgtttatccaaa 34610993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 42039091 - 42039139
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||| ||||| |||||||| |||||||| || ||||||||||    
T  42039091 taagtgcttatgtataagctatttctgtaacaaaaaataaaataaagtc 42039139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 1863 - 1815
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||||||||||||||||  || |||||||||||||||| |||||||||    
T  1863 ataagtgcttatatataagataattctataacaaaagataaaataaagt 1815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 3953 - 3905
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaagatcaaataaagt 132  Q
    ||||||||||||||||||  || |||||||||||||||| |||||||||    
T  3953 ataagtgcttatatataagataattctataacaaaagataaaataaagt 3905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 20111 - 20159
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtc 133  Q
    ||||||||||| |||| |||||||||||||| |||||| ||||||||||    
T  20111 taagtgcttatgtatatactatttctataaccaaagataaaataaagtc 20159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 119
Target Start/End: Complemental strand, 6776 - 6741
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaa 119  Q
    |||||||||||| |||||||||||||||||||||||    
T  6776 ataagtgcttatgtataaactatttctataacaaaa 6741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 5079 - 5016
Alignment:
Q  67 gtataagcgcttatggaataagtgcttatatataaactatttctataacaaaagatcaaataaa 130  Q
    ||||||||||||||    |||||||| |||| ||||||||||||||||| |||||| |||||||    
T  5079 gtataagcgcttattatttaagtgctcatatgtaaactatttctataactaaagataaaataaa 5016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 119
Target Start/End: Complemental strand, 116695 - 116660
Alignment:
Q  84 ataagtgcttatatataaactatttctataacaaaa 119  Q
    |||||||||||| |||||||||||||||||||||||    
T  116695 ataagtgcttatgtataaactatttctataacaaaa 116660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 23848 - 23894
Alignment:
Q  90 gcttatatataaactatttctataacaaaagatcaaataaagtctaa 136  Q
    ||||| |||||| |||||||||||||||||||| ||||||| |||||    
T  23848 gcttacatataagctatttctataacaaaagatgaaataaactctaa 23894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 175
Target Start/End: Original strand, 27508 - 27593
Alignment:
Q  85 taagtgcttatatataaactatttctataacaaaagatcaaataaagtctaatctaactattttcatataaattataagctgtttgcataa 175  Q
    ||||||||||| |||||  ||||||||||||| ||||| |||||||||| |||     | |||||||||||| |||||| ||||| |||||    
T  27508 taagtgcttatgtataagttatttctataacagaagataaaataaagtcaaat-----tgttttcatataaactataagttgttttcataa 27593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University