View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21257_low_17 (Length: 272)
Name: NF21257_low_17
Description: NF21257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21257_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 37806505 - 37806729
Alignment:
| Q |
1 |
acctaatctattgtgttggttttatttatccactacatttatctatgaaatattcaataccaagcttttgtcttttgttcgtttaaacaatactatgtta |
100 |
Q |
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| T |
37806505 |
acctaatctattgtgttggttttatttatccactacatttatctatgaaatattcaataccaagcttttgtcttttgttcgttgaaacaatactatgtta |
37806604 |
T |
|
| Q |
101 |
tggataatttagagtccatttgttgatttttctagggnnnnnnntcaccttttttaaacaaagtaatcannnnnnnnnnnnnnncatcggtttattgtat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |
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| T |
37806605 |
tggataatttagagtccatttgttgatttttctagggaaaaaaatcaccttttttaaacaaagtaatcatttttaattttttttcatcggtttattgtat |
37806704 |
T |
|
| Q |
201 |
attgttgaaaaaaagaatttaaaga |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
37806705 |
attgttgaaaaaaagaatttaaaga |
37806729 |
T |
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