View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21257_low_19 (Length: 258)

Name: NF21257_low_19
Description: NF21257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21257_low_19
NF21257_low_19
[»] chr5 (39 HSPs)
chr5 (91-245)||(9240198-9240351)
chr5 (19-124)||(9240091-9240196)
chr5 (69-188)||(29803280-29803398)
chr5 (69-188)||(8787053-8787172)
chr5 (69-188)||(26627385-26627504)
chr5 (74-166)||(41210432-41210524)
chr5 (69-135)||(14647616-14647683)
chr5 (66-188)||(36415959-36416081)
chr5 (106-164)||(4985456-4985514)
chr5 (69-198)||(27340924-27341053)
chr5 (69-144)||(9636098-9636174)
chr5 (110-198)||(10059663-10059751)
chr5 (106-197)||(3154530-3154621)
chr5 (69-135)||(3634549-3634616)
chr5 (69-135)||(14206444-14206511)
chr5 (93-167)||(32536895-32536969)
chr5 (93-146)||(2629899-2629953)
chr5 (69-145)||(3141550-3141628)
chr5 (106-196)||(3722965-3723054)
chr5 (69-197)||(9940111-9940238)
chr5 (68-145)||(13613903-13613981)
chr5 (106-188)||(25038173-25038254)
chr5 (108-166)||(39032735-39032793)
chr5 (69-198)||(41460171-41460301)
chr5 (108-193)||(2971365-2971450)
chr5 (108-197)||(7435870-7435959)
chr5 (69-149)||(13734295-13734376)
chr5 (69-145)||(22920431-22920508)
chr5 (69-183)||(32425006-32425121)
chr5 (101-198)||(34952292-34952388)
chr5 (93-197)||(36786145-36786250)
chr5 (108-148)||(3770960-3771000)
chr5 (69-148)||(11880923-11881003)
chr5 (106-146)||(15022175-15022215)
chr5 (120-196)||(22402743-22402819)
chr5 (158-206)||(26685529-26685577)
chr5 (158-206)||(26955260-26955308)
chr5 (93-164)||(29806922-29806994)
chr5 (69-132)||(34693168-34693232)
[»] chr4 (49 HSPs)
chr4 (69-193)||(35661488-35661613)
chr4 (69-166)||(33438100-33438198)
chr4 (108-200)||(13182426-13182518)
chr4 (69-199)||(30778150-30778280)
chr4 (99-200)||(33574958-33575059)
chr4 (106-198)||(34259918-34260011)
chr4 (69-132)||(21766602-21766666)
chr4 (69-201)||(52456812-52456943)
chr4 (69-135)||(15515839-15515906)
chr4 (97-188)||(22071582-22071672)
chr4 (69-135)||(22893923-22893990)
chr4 (69-135)||(22945591-22945658)
chr4 (141-196)||(40090811-40090866)
chr4 (77-135)||(43307313-43307372)
chr4 (69-197)||(18874811-18874938)
chr4 (69-145)||(1580222-1580299)
chr4 (69-197)||(9095992-9096120)
chr4 (99-196)||(41609560-41609657)
chr4 (69-188)||(37022316-37022436)
chr4 (69-132)||(1728041-1728103)
chr4 (69-135)||(1868842-1868909)
chr4 (106-197)||(19910903-19910994)
chr4 (69-135)||(22257145-22257212)
chr4 (69-146)||(44272750-44272826)
chr4 (69-123)||(46791952-46792007)
chr4 (93-167)||(46844158-46844233)
chr4 (107-197)||(3475962-3476052)
chr4 (106-148)||(8455996-8456038)
chr4 (69-166)||(17363285-17363383)
chr4 (69-166)||(22920189-22920287)
chr4 (69-166)||(22971512-22971610)
chr4 (69-166)||(39880948-39881046)
chr4 (69-197)||(6126908-6127037)
chr4 (106-167)||(11064006-11064067)
chr4 (143-188)||(17367377-17367422)
chr4 (69-120)||(18944334-18944382)
chr4 (108-149)||(19315001-19315042)
chr4 (69-144)||(26440720-26440794)
chr4 (69-197)||(29406925-29407053)
chr4 (69-149)||(29949608-29949689)
chr4 (108-196)||(30042227-30042315)
chr4 (108-145)||(55899513-55899550)
chr4 (69-188)||(30890182-30890301)
chr4 (69-145)||(30973641-30973716)
chr4 (69-132)||(36364737-36364801)
chr4 (69-188)||(36413224-36413342)
chr4 (145-197)||(38864756-38864808)
chr4 (106-166)||(43358706-43358766)
chr4 (69-144)||(46566984-46567060)
[»] chr1 (51 HSPs)
chr1 (109-193)||(9882555-9882639)
chr1 (69-188)||(51168664-51168784)
chr1 (106-197)||(7420727-7420818)
chr1 (70-168)||(6841847-6841946)
chr1 (69-203)||(21255666-21255801)
chr1 (69-197)||(41558048-41558176)
chr1 (69-188)||(26839435-26839553)
chr1 (69-168)||(39669861-39669961)
chr1 (69-144)||(49621418-49621492)
chr1 (69-135)||(50460661-50460728)
chr1 (76-197)||(14002629-14002751)
chr1 (69-166)||(41885776-41885874)
chr1 (69-198)||(44730699-44730828)
chr1 (69-135)||(48390028-48390093)
chr1 (69-166)||(25988904-25989000)
chr1 (69-133)||(51172258-51172323)
chr1 (69-148)||(4604584-4604664)
chr1 (69-188)||(29489255-29489375)
chr1 (69-132)||(30414919-30414983)
chr1 (69-132)||(32873396-32873460)
chr1 (69-140)||(40118659-40118731)
chr1 (69-132)||(48962041-48962105)
chr1 (100-179)||(26101482-26101561)
chr1 (69-167)||(36690489-36690588)
chr1 (69-167)||(36706590-36706689)
chr1 (69-148)||(36930692-36930770)
chr1 (93-135)||(44714320-44714363)
chr1 (69-194)||(2854850-2854976)
chr1 (69-166)||(31290126-31290224)
chr1 (69-166)||(34941838-34941936)
chr1 (69-198)||(40238493-40238623)
chr1 (93-167)||(51703029-51703102)
chr1 (69-145)||(15061900-15061977)
chr1 (108-161)||(30505261-30505314)
chr1 (69-197)||(30530287-30530415)
chr1 (69-145)||(40595993-40596070)
chr1 (69-145)||(49425792-49425869)
chr1 (112-196)||(13078937-13079021)
chr1 (69-192)||(18648820-18648943)
chr1 (69-200)||(23554806-23554938)
chr1 (69-136)||(24611899-24611967)
chr1 (69-148)||(25061788-25061868)
chr1 (69-144)||(25098728-25098804)
chr1 (69-168)||(25995515-25995615)
chr1 (69-144)||(27352685-27352761)
chr1 (69-132)||(29638770-29638834)
chr1 (69-144)||(32821690-32821766)
chr1 (69-135)||(33111862-33111927)
chr1 (114-166)||(43853357-43853409)
chr1 (73-188)||(50035434-50035550)
chr1 (69-148)||(50527993-50528073)
[»] chr3 (49 HSPs)
chr3 (69-174)||(37710459-37710565)
chr3 (69-194)||(29525288-29525412)
chr3 (69-135)||(44689858-44689925)
chr3 (110-188)||(1031324-1031401)
chr3 (69-161)||(8627912-8628005)
chr3 (69-148)||(7150-7230)
chr3 (114-198)||(30640-30723)
chr3 (69-144)||(34900695-34900771)
chr3 (69-148)||(41309055-41309135)
chr3 (69-188)||(44127088-44127208)
chr3 (69-135)||(20549334-20549401)
chr3 (69-135)||(51385389-51385456)
chr3 (112-197)||(12762827-12762915)
chr3 (106-192)||(35756073-35756159)
chr3 (69-146)||(40785637-40785715)
chr3 (69-188)||(43900657-43900773)
chr3 (99-197)||(44910790-44910888)
chr3 (69-198)||(47683845-47683975)
chr3 (108-166)||(52678511-52678569)
chr3 (96-197)||(35987324-35987425)
chr3 (66-198)||(42102289-42102422)
chr3 (69-161)||(55344219-55344312)
chr3 (69-148)||(1295387-1295467)
chr3 (69-135)||(14838994-14839061)
chr3 (69-188)||(29800446-29800565)
chr3 (108-148)||(35765282-35765322)
chr3 (69-132)||(37585486-37585550)
chr3 (93-188)||(49886742-49886838)
chr3 (131-194)||(16675903-16675966)
chr3 (106-197)||(27198041-27198132)
chr3 (69-135)||(27276789-27276856)
chr3 (76-197)||(32687847-32687969)
chr3 (69-135)||(35368666-35368733)
chr3 (106-181)||(43977121-43977196)
chr3 (69-135)||(30664558-30664623)
chr3 (69-130)||(33971938-33972000)
chr3 (69-197)||(45150152-45150282)
chr3 (69-145)||(6126509-6126586)
chr3 (69-145)||(14207430-14207507)
chr3 (69-145)||(14215178-14215255)
chr3 (69-149)||(25959477-25959558)
chr3 (108-169)||(26021900-26021961)
chr3 (157-198)||(41717261-41717302)
chr3 (69-197)||(46473183-46473311)
chr3 (108-197)||(46626658-46626747)
chr3 (69-144)||(1901866-1901942)
chr3 (69-144)||(1911312-1911388)
chr3 (69-132)||(29555793-29555854)
chr3 (108-160)||(38692250-38692302)
[»] chr7 (38 HSPs)
chr7 (101-198)||(31467692-31467789)
chr7 (69-197)||(44187746-44187875)
chr7 (69-188)||(27688692-27688811)
chr7 (69-168)||(2323348-2323448)
chr7 (69-132)||(23034265-23034329)
chr7 (106-197)||(10591035-10591126)
chr7 (69-135)||(47424934-47425001)
chr7 (69-198)||(17500752-17500881)
chr7 (69-198)||(17552333-17552462)
chr7 (69-145)||(21839072-21839149)
chr7 (106-195)||(32315919-32316008)
chr7 (70-186)||(33890643-33890760)
chr7 (106-167)||(37149392-37149453)
chr7 (68-188)||(42640897-42641017)
chr7 (69-132)||(24380673-24380737)
chr7 (69-193)||(27075525-27075647)
chr7 (69-193)||(27202664-27202786)
chr7 (69-132)||(41910137-41910201)
chr7 (106-174)||(49014309-49014377)
chr7 (69-148)||(6655553-6655631)
chr7 (69-167)||(12102626-12102725)
chr7 (69-146)||(4678118-4678196)
chr7 (99-197)||(25332387-25332484)
chr7 (91-148)||(44175622-44175680)
chr7 (70-167)||(49143557-49143655)
chr7 (101-198)||(10014841-10014938)
chr7 (69-197)||(27330915-27331043)
chr7 (69-145)||(37325758-37325835)
chr7 (69-145)||(37351929-37352006)
chr7 (69-145)||(37392098-37392175)
chr7 (106-166)||(12141977-12142037)
chr7 (69-144)||(18157125-18157201)
chr7 (106-146)||(23816374-23816414)
chr7 (106-166)||(31329272-31329332)
chr7 (106-142)||(35590737-35590773)
chr7 (93-188)||(40077334-40077430)
chr7 (108-188)||(47530187-47530267)
chr7 (69-131)||(48639338-48639399)
[»] chr8 (32 HSPs)
chr8 (69-164)||(42716375-42716471)
chr8 (69-188)||(30578309-30578429)
chr8 (69-166)||(6849179-6849277)
chr8 (69-166)||(21273628-21273726)
chr8 (69-158)||(40997712-40997804)
chr8 (69-145)||(295601-295678)
chr8 (69-132)||(37294649-37294713)
chr8 (106-197)||(36497754-36497845)
chr8 (69-166)||(9431203-9431301)
chr8 (107-197)||(36675419-36675509)
chr8 (69-141)||(32175009-32175082)
chr8 (106-166)||(7376616-7376676)
chr8 (69-132)||(9985630-9985694)
chr8 (69-196)||(20994946-20995074)
chr8 (69-132)||(25430701-25430765)
chr8 (69-132)||(34838222-34838286)
chr8 (69-135)||(6243089-6243156)
chr8 (93-168)||(8074641-8074716)
chr8 (69-168)||(23952549-23952648)
chr8 (110-197)||(33511698-33511785)
chr8 (106-161)||(40608606-40608661)
chr8 (106-200)||(10344421-10344515)
chr8 (106-188)||(44672130-44672211)
chr8 (106-167)||(154383-154444)
chr8 (106-151)||(7596824-7596869)
chr8 (71-135)||(37471700-37471765)
chr8 (131-196)||(40723354-40723419)
chr8 (106-174)||(5925148-5925216)
chr8 (106-146)||(26629047-26629087)
chr8 (69-132)||(27300401-27300465)
chr8 (97-145)||(37568551-37568599)
chr8 (69-144)||(44380554-44380630)
[»] scaffold0003 (1 HSPs)
scaffold0003 (69-197)||(337173-337301)
[»] chr2 (43 HSPs)
chr2 (69-197)||(6742297-6742426)
chr2 (69-197)||(8555179-8555307)
chr2 (69-167)||(30973908-30974007)
chr2 (106-199)||(10550344-10550437)
chr2 (112-169)||(17267574-17267631)
chr2 (108-161)||(39737611-39737664)
chr2 (69-140)||(35798264-35798336)
chr2 (69-132)||(38598301-38598365)
chr2 (69-135)||(18508133-18508200)
chr2 (69-195)||(36795785-36795911)
chr2 (71-132)||(24491629-24491691)
chr2 (99-169)||(38464499-38464569)
chr2 (69-145)||(41353436-41353513)
chr2 (69-132)||(1096295-1096359)
chr2 (69-132)||(8757599-8757663)
chr2 (69-132)||(12256956-12257020)
chr2 (108-188)||(20533959-20534039)
chr2 (106-198)||(33029988-33030080)
chr2 (108-172)||(34101084-34101148)
chr2 (69-188)||(44484552-44484672)
chr2 (143-198)||(9521846-9521901)
chr2 (69-135)||(18749312-18749379)
chr2 (114-193)||(18949107-18949185)
chr2 (69-135)||(19523350-19523417)
chr2 (70-188)||(37631263-37631382)
chr2 (106-197)||(43791678-43791769)
chr2 (69-188)||(25997627-25997743)
chr2 (69-196)||(26809546-26809673)
chr2 (69-130)||(31635764-31635826)
chr2 (106-188)||(32128223-32128303)
chr2 (106-200)||(35518368-35518462)
chr2 (106-148)||(38689002-38689044)
chr2 (93-166)||(39285932-39286006)
chr2 (93-201)||(11164260-11164368)
chr2 (69-145)||(26321636-26321713)
chr2 (69-145)||(36383517-36383594)
chr2 (99-148)||(45515535-45515584)
chr2 (70-145)||(5455392-5455468)
chr2 (69-188)||(11126519-11126637)
chr2 (69-132)||(38027567-38027631)
chr2 (106-166)||(39744512-39744572)
chr2 (69-144)||(40951248-40951321)
chr2 (161-197)||(43486757-43486793)
[»] scaffold0086 (1 HSPs)
scaffold0086 (69-188)||(17226-17346)
[»] scaffold0024 (1 HSPs)
scaffold0024 (69-132)||(48709-48773)
[»] chr6 (15 HSPs)
chr6 (106-174)||(4923039-4923107)
chr6 (70-132)||(17442878-17442941)
chr6 (69-135)||(27790184-27790251)
chr6 (84-140)||(12277849-12277906)
chr6 (99-167)||(2340485-2340552)
chr6 (69-148)||(32729944-32730024)
chr6 (110-169)||(30796010-30796069)
chr6 (69-130)||(9395291-9395353)
chr6 (114-203)||(3401181-3401269)
chr6 (106-167)||(17835705-17835766)
chr6 (69-145)||(32853083-32853160)
chr6 (69-164)||(10387737-10387833)
chr6 (69-132)||(12151809-12151873)
chr6 (106-138)||(31934106-31934138)
chr6 (106-197)||(32253873-32253964)
[»] scaffold0016 (1 HSPs)
scaffold0016 (69-173)||(204358-204463)
[»] scaffold0014 (1 HSPs)
scaffold0014 (69-144)||(199321-199397)
[»] scaffold0115 (1 HSPs)
scaffold0115 (106-197)||(15077-15166)
[»] scaffold0036 (1 HSPs)
scaffold0036 (108-197)||(18099-18186)
[»] scaffold0002 (1 HSPs)
scaffold0002 (69-144)||(440773-440849)


Alignment Details
Target: chr5 (Bit Score: 127; Significance: 1e-65; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 91 - 245
Target Start/End: Original strand, 9240198 - 9240351
Alignment:
Q  91 catctctcttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatga 190  Q
    |||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9240198 catctctcttcttt-tatctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcacaaaagttgtcaccaaataattgtacaaatatga 9240296  T
Q  191 ttactctattacttatcatgtagaaaatctaaaacttacgcttacaattcaacct 245  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  9240297 ttactctattacttatcaggtagaaaatccaaaacttacgcttacaattcaacct 9240351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 9240091 - 9240196
Alignment:
Q  19 atttgtacaacaatcaattttgtgataacttttgaacaannnnnnngtcacatactcacattatcttcttaccatctctctt-ttttatctctctctatt 117  Q
    |||||||||||||||||||||||||||||||||||| ||        ||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9240091 atttgtacaacaatcaattttgtgataacttttgaataatttttta-tcatatactcacattatcttcttaccatctctcttcttttatctctctctatt 9240189  T
Q  118 gttttta 124  Q
    |||||||    
T  9240190 gttttta 9240196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 29803280 - 29803398
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||| ||||||||| |||||||  |||||||| |||| |||||||||||||||||| |||||||| || | |||||||| |  || |||| ||||||||     
T  29803280 catattcacattatattcttac--tctctcttcttttttctctctctattgtttttgaccaataataagagagaaaaaggaggttgtcatcaaagttgtt 29803377  T
Q  168 accaaataattgtacaaatat 188  Q
    | ||||||||||| |||||||    
T  29803378 agcaaataattgttcaaatat 29803398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 8787172 - 8787053
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||| |||||||||| |||||   ||||||||| ||| |||||||||||||||||||||||||| | | | | ||||||||| || ||||| |||||||     
T  8787172 catattcacattatcatcttattctctctctttctttttctctctctattgtttttaaccaatagagagagaaaaaaagaaaattgtcatacaagttgt- 8787074  T
Q  168 accaaataattgtacaaatat 188  Q
    |||||||  ||||||||||||    
T  8787073 accaaatggttgtacaaatat 8787053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 26627385 - 26627504
Alignment:
Q  69 catactcacattatcttcttaccatctctc-ttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| ||||||||||||||| |  ||| |||||||| ||||||||| |||| ||| || | ||||||||||  || |||| ||||||||     
T  26627385 catactcacattatattcttaccatctctcatcctttttctctctccattgtttttgaccattaataaaagagaaaaagaaggttgtcatgaaagttgt- 26627483  T
Q  168 accaaataattgtacaaatat 188  Q
    |||||||| |||| |||||||    
T  26627484 accaaatagttgttcaaatat 26627504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 166
Target Start/End: Complemental strand, 41210524 - 41210432
Alignment:
Q  74 tcacattatcttcttaccatctctcttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    ||||||||| |||||||  ||||||||  || |||||||||||||||||| |||||||| || | |||||||| |  || |||||||||||||    
T  41210524 tcacattatattcttactctctctcttccttttctctctctattgtttttgaccaataagaagagagaaaaaggaggttgtcataaaagttgt 41210432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 14647616 - 14647683
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaa 135  Q
    ||||||||||||||||||||  ||||||||||  ||| |||||||| ||| |||||||||||||||||    
T  14647616 catactcacattatcttcttttcatctctcttcctttttctctctccattatttttaaccaataaaaa 14647683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 36416081 - 36415959
Alignment:
Q  66 tcacatactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagtt 164  Q
    ||||||||||||||||||||||||  |||||||||  ||| |||||||||| | ||||| |||||| |||| | ||||||  ||| || |||| ||||||    
T  36416081 tcacatactcacattatcttcttattatctctcttcctttttctctctctagtatttttgaccaatcaaaagagagaaaaccaaagttgtcatgaaagtt 36415982  T
Q  165 gtcaccaaataattgtacaaatat 188  Q
    || |||||| | ||||||| ||||    
T  36415981 gt-accaaagagttgtacatatat 36415959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 4985456 - 4985514
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagtt 164  Q
    ||||||||||||||||||| ||||||| || | ||||||||||| |||||||| |||||    
T  4985456 tctctctctattgtttttatccaataagaagagagaaaaagaaaattatcatataagtt 4985514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 198
Target Start/End: Original strand, 27340924 - 27341053
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| ||||||   ||||||||  ||| |||||||||||||||||  ||||||||||| | || ||| |||| || |||| ||| ||||     
T  27340924 catactcacattatattcttattctctctcttcctttttctctctctattgttttggaccaataaaaagagagcaaatgaaagttgtcatcaaaattgt- 27341022  T
Q  168 accaaataattgtacaaatatgattactcta 198  Q
    ||||||| |||||||| |||| | |||||||    
T  27341023 accaaatgattgtacatatatcactactcta 27341053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 9636174 - 9636098
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaa 144  Q
    |||||||||||||| |||||||| ||||||||  ||| |||||||| ||||||||| |||||| |||| | ||||||    
T  9636174 catactcacattatattcttaccctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 9636098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 198
Target Start/End: Original strand, 10059663 - 10059751
Alignment:
Q  110 tctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactcta 198  Q
    |||||||||||||| ||||||||||  | ||| ||||||  ||  || ||||||| | | ||||||||||||||||||| |||||||||    
T  10059663 tctctattgtttttgaccaataaaataatagagaaagaaggttgccacaaaagttattatcaaataattgtacaaatatcattactcta 10059751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 197
Target Start/End: Complemental strand, 3154621 - 3154530
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    |||||||| ||| |||||||| |||||||| | ||||||| ||| || |||  ||| |||||| ||| ||| ||||||||||| ||||||||    
T  3154621 tctctctccattttttttaactaataaaaagagagaaaaataaagttgtcaccaaaattgtcatcaattaaatgtacaaatatcattactct 3154530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 3634549 - 3634616
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaa 135  Q
    ||||||||||||||| ||||| | |||||||| |||| ||||||||| |||||||||| |||| ||||    
T  3634549 catactcacattatcctcttatcctctctcttcttttttctctctctgttgtttttaatcaatgaaaa 3634616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 14206444 - 14206511
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaa 135  Q
    ||||||||||||||| |||||  |||||||||  ||| |||||||| |||||||||||||||| ||||    
T  14206444 catactcacattatcctcttattatctctcttcatttttctctctccattgtttttaaccaatgaaaa 14206511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 32536895 - 32536969
Alignment:
Q  93 tctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||| |||| |||||||||||||||||| | ||||||||| ||||| ||| ||| |||||| ||||||||||    
T  32536895 tctctcttcttttttctctctctattgtttttgatcaataaaaagaaagagaaa-aaaattatcacaaaagttgtc 32536969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 2629899 - 2629953
Alignment:
Q  93 tctctcttttt-tatctctctctattgtttttaaccaataaaaataaagaaaaag 146  Q
    ||||||||||| | ||||||||||||||||||  |||||||||||| ||||||||    
T  2629899 tctctctttttctttctctctctattgtttttgtccaataaaaatagagaaaaag 2629953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 3141550 - 3141628
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattg-tttttaaccaataaaaataaagaaaaa 145  Q
    ||||||||||||||| |||||   |||||||| |||| ||||||||||||| |||||||||||| |||| | |||||||    
T  3141550 catactcacattatcatcttattctctctcttcttttttctctctctattgttttttaaccaatgaaaagagagaaaaa 3141628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 3723054 - 3722965
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactc 196  Q
    |||||||| ||||||||  ||||||||||| | |||||| |||| || |||| ||||||||| ||||||  ||||||| |||| |||||||    
T  3723054 tctctctccattgttttggaccaataaaaagagagaaaatgaaagttgtcatcaaagttgtc-ccaaatggttgtacatatatcattactc 3722965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 9940111 - 9940238
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    ||||||||||||||||||||||  ||||||||| ||| |||||||  ||||||||| |||||| |||| | |||| || ||| || || ||||| ||||     
T  9940111 catactcacattatcttcttac--tctctctttctttttctctcttaattgtttttgaccaatgaaaagagagaacaacaaagttgtcctaaaaattgta 9940208  T
Q  168 accaaataattgtacaaatatgattactct 197  Q
     | ||||| || | ||||||| ||||||||    
T  9940209 tcaaaatagttattcaaatatcattactct 9940238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 13613981 - 13613903
Alignment:
Q  68 acatactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    |||||||||||||||| |||||   ||||||||  ||| |||||||| |||||||||||||||| |||| | |||||||    
T  13613981 acatactcacattatcctcttattctctctcttcatttttctctctccattgtttttaaccaatgaaaagagagaaaaa 13613903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 188
Target Start/End: Original strand, 25038173 - 25038254
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatat 188  Q
    |||||||||||| |||||||||||| |||| | | ||||  ||| ||||||| |||||||| |||||| | ||||||||||||    
T  25038173 tctctctctattatttttaaccaatcaaaagagataaaactaaagttatcatgaaagttgt-accaaagagttgtacaaatat 25038254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 39032793 - 39032735
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    ||||||||||| |||| || ||| |||||||||||||| ||| || |||||||||||||    
T  39032793 tctctctattgattttgacaaatcaaaataaagaaaaacaaagttgtcataaaagttgt 39032735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 198
Target Start/End: Original strand, 41460171 - 41460301
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| ||||||   ||||||||  ||| |||||||| |||||||||||||||| |||| | |||||||  |  || |||| ||||||||     
T  41460171 catactcacattatattcttattctctctcttcatttttctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgtt 41460270  T
Q  168 accaaataattgtacaaatatgattactcta 198  Q
    | |||||  |||| ||||||| ||| |||||    
T  41460271 agcaaatggttgttcaaatattattgctcta 41460301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 2971450 - 2971365
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgatta 193  Q
    |||||||||| ||||| || |||||||| | |||| || |  ||||| | |||||||||||| ||| |||||||||||||| ||||    
T  2971450 tctctctattattttttactaataaaaagatagaacaaaatgtttataacaaaagttgtcacaaaaaaattgtacaaatattatta 2971365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 7435959 - 7435870
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    |||||||||||||||| | |||||| || ||| |||||||   ||||||||||||||||    ||||| |||||||||||| | ||||||    
T  7435959 tctctctattgtttttgatcaataagaagaaataaaaagaggattatcataaaagttgttgaaaaatagttgtacaaatatcaatactct 7435870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 13734376 - 13734295
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaa 149  Q
    |||||||||||||| |||||||  ||||| || |||| |||||||| ||||||||| |||||| |||| | |||||| ||||    
T  13734376 catactcacattatattcttactctctcttttcttttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaa 13734295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 22920508 - 22920431
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    ||||||||||| || |||||| ||||||||||  ||| |||||||| ||||||||| |||||||| || | |||||||    
T  22920508 catactcacatgatgttcttatcatctctcttcatttttctctctccattgtttttgaccaataagaagagagaaaaa 22920431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 183
Target Start/End: Original strand, 32425006 - 32425121
Alignment:
Q  69 catactcacattatcttcttaccatctctctt--ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    |||||||||||||||||||||   | ||||||  |||| | |||||||||| ||||| |||||| |||| | ||||||  ||| || |||| ||||||||    
T  32425006 catactcacattatcttcttattttttctctttcttttttttctctctattatttttgaccaatcaaaagatagaaaattaaagttgtcatgaaagttgt 32425105  T
Q  167 caccaaataattgtaca 183  Q
     |||||||| |||||||    
T  32425106 -accaaatagttgtaca 32425121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 198
Target Start/End: Complemental strand, 34952388 - 34952292
Alignment:
Q  101 ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactcta 198  Q
    |||| |||||||||||||||||  |||||||| || | ||||||  ||| || |||| |||||| || ||||||||||||||| |||| | |||||||    
T  34952388 ttttttctctctctattgttttggaccaataagaagagagaaaataaaagttgtcatcaaagttatc-ccaaataattgtacatatatcactactcta 34952292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 36786250 - 36786145
Alignment:
Q  93 tctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgat 191  Q
    ||||||||| ||| |||||||||||||||||| ||||||| ||| | ||||||  ||| || ||| ||||||||||| ||  | | |||||| |||| ||    
T  36786250 tctctctttctttttctctctctattgtttttgaccaatagaaagagagaaaagcaaagttgtcacaaaagttgtcatcacttgaatgtacatatatcat 36786151  T
Q  192 tactct 197  Q
    ||||||    
T  36786150 tactct 36786145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 3771000 - 3770960
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaagaa 148  Q
    |||||||||||||||| ||||||||||| | ||||||||||    
T  3771000 tctctctattgtttttgaccaataaaaagagagaaaaagaa 3770960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 11881003 - 11880923
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaa 148  Q
    ||||||||||||||||||||||  ||||||||  ||| ||||| || ||||||||| |||||| | || | ||||||||||    
T  11881003 catactcacattatcttcttactctctctcttcctttttctctttccattgtttttgaccaatgagaagagagaaaaagaa 11880923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 15022215 - 15022175
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaag 146  Q
    ||||||||||||||||||  |||||||||||| ||||||||    
T  15022215 tctctctctattgtttttgtccaataaaaatagagaaaaag 15022175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 22402743 - 22402819
Alignment:
Q  120 ttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactc 196  Q
    |||| ||||||||||| | | ||| | ||| || ||| ||||||||||| ||||||||| ||||||||| |||||||    
T  22402743 ttttgaccaataaaaaaagaaaaatataaaattgtcacaaaagttgtcatcaaataattatacaaatatcattactc 22402819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 26685529 - 26685577
Alignment:
Q  158 aaaagttgtcaccaaataattgtacaaatatgattactctattacttat 206  Q
    |||||||||||| ||||  |||||||||||| ||||||||||| |||||    
T  26685529 aaaagttgtcacaaaatggttgtacaaatattattactctatttcttat 26685577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 26955260 - 26955308
Alignment:
Q  158 aaaagttgtcaccaaataattgtacaaatatgattactctattacttat 206  Q
    |||||||||||| ||||  |||||||||||| ||||||||||| |||||    
T  26955260 aaaagttgtcacaaaatggttgtacaaatattattactctatttcttat 26955308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 29806994 - 29806922
Alignment:
Q  93 tctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagtt 164  Q
    |||||||| |||| |||||| |||||||||||||||||| | |  ||||||||| ||| || |||||||||||    
T  29806994 tctctcttcttttttctctccctattgtttttaaccaatcataggaaagaaaaataaaattgtcataaaagtt 29806922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 34693232 - 34693168
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   ||||||||| ||| ||| | |||||||||||| ||||||||    
T  34693232 catactcacattatcttcttattctctctctttctttttctttttctattgtttttgaccaataa 34693168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 35661613 - 35661488
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| || ||| | ||||||||  ||| |||  |||| |||||||| ||||||||||||||||||||||||  || | | ||||||||||    
T  35661613 catactcacattatgtttttatcctctctcttcctttttctaactcttttgttttttaccaataaaaataaagaaaaagaatgttgttacaaaagttgtc 35661514  T
Q  168 accaaataattgtacaaatatgatta 193  Q
    ||||||||||||| ||||||||||||    
T  35661513 accaaataattgttcaaatatgatta 35661488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 33438100 - 33438198
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    |||||||||||||| |||||||  ||||||||| ||| |||||||||||||||||| ||||||||||| | |||||| |||  |||||| |||||||||    
T  33438100 catactcacattatattcttactctctctctttatttttctctctctattgtttttgaccaataaaaagagagaaaatgaaggttatcaaaaaagttgt 33438198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 13182426 - 13182518
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactctatt 200  Q
    |||||||||||||||||||||||||||| | ||||||| ||  ||||||| |||||||||| ||| |   ||||||||||| |||||||||||    
T  13182426 tctctctattgtttttaaccaataaaaaaagagaaaaacaagattatcatcaaagttgtcatcaatttgatgtacaaatatcattactctatt 13182518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 199
Target Start/End: Complemental strand, 30778280 - 30778150
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    ||||||||||||||  |||||  |||||||||  ||| |||||||| ||||||||||||||||||||| | |||||||  || || ||||||||||| |     
T  30778280 catactcacattatactcttattatctctcttcctttttctctctccattgtttttaaccaataaaaagagagaaaaaagaaattgtcataaaagttat- 30778182  T
Q  168 accaaataattgtacaaatatgattactctat 199  Q
    | |||||| |||| ||||||| ||||||||||    
T  30778181 atcaaatagttgttcaaatatcattactctat 30778150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 33575059 - 33574958
Alignment:
Q  99 ttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactcta 198  Q
    |||||| |||| ||| ||||||||| ||||||||||| | ||||||||||   | ||| |||||||||| | |||||||||||||||||| |||| ||||    
T  33575059 ttttttctctccctcaattgtttttgaccaataaaaaaagagaaaaagaagagtgtcacaaaagttgtcccgaaataattgtacaaatatcattattcta 33574960  T
Q  199 tt 200  Q
    ||    
T  33574959 tt 33574958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 198
Target Start/End: Original strand, 34259918 - 34260011
Alignment:
Q  106 tctctctct-attgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactcta 198  Q
    ||||||||| || |||||| |||||||| || | |||||||||| ||| ||| |||||||||||||||||  |||||||||||| |||||||||    
T  34259918 tctctctctcatagtttttgaccaataagaagagagaaaaagaagtttgtcacaaaagttgtcaccaaatggttgtacaaatatcattactcta 34260011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 21766602 - 21766666
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   ||||||||| ||| |||||||||||||||||||||||||||    
T  21766602 catactcacattatcttcttattctctctctttctttttctctctctattgtttttaaccaataa 21766666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 201
Target Start/End: Complemental strand, 52456943 - 52456812
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| || ||||  ||||||||  ||| |||||||  ||| ||||| ||||||||||| | | |||||| |  ||||||| ||||||||     
T  52456943 catactcacattatatttttac--tctctcttcctttttctctctacattatttttgaccaataaaaaaataaaaaaaggagattatcattaaagttgtt 52456846  T
Q  168 accaaataattgtacaaatatgattactctatta 201  Q
    | ||||||||||| ||||||| ||||||||||||    
T  52456845 agcaaataattgttcaaatatcattactctatta 52456812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 15515839 - 15515906
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaa 135  Q
    ||||||||||||||||||||  ||||||||||  ||| |||||||| ||||||||| |||||||||||    
T  15515839 catactcacattatcttcttttcatctctcttcctttttctctctccattgtttttgaccaataaaaa 15515906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 22071582 - 22071672
Alignment:
Q  97 tcttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatat 188  Q
    |||||| | ||||||||||||||||||||||||||| || | ||||||||||| || ||| | ||||||| |||||||  |||||| |||||    
T  22071582 tcttttctctctctctctattgtttttaaccaataagaagagagaaaaagaaagttgtcaaacaagttgt-accaaatggttgtactaatat 22071672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 22893923 - 22893990
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||||||||||   ||||||||| ||| |||||||| ||||||||| |||||||||||    
T  22893923 catactcacattatcttcttattctctctctttctttgtctctctccattgtttttgaccaataaaaa 22893990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 22945591 - 22945658
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||||||||||   ||||||||| ||| |||||||| ||||||||| |||||||||||    
T  22945591 catactcacattatcttcttattctctctctttctttgtctctctccattgtttttgaccaataaaaa 22945658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 40090811 - 40090866
Alignment:
Q  141 aaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactc 196  Q
    ||||| |||||||||| ||||||| ||| ||||||||||||||||||| |||||||    
T  40090811 aaaaaaaaatttatcacaaaagttctcatcaaataattgtacaaatatcattactc 40090866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 43307372 - 43307313
Alignment:
Q  77 cattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||   ||||||||| ||| ||||||||||||||||||||||||||||||    
T  43307372 cattatcttcttattctctctctttctttttctctctctattgtttttaaccaataaaaa 43307313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 18874938 - 18874811
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| |||||||  ||||||||  ||| |||||||| ||||||||| |||||| | || | |||||||| |  || |||||||||||||     
T  18874938 catactcacattatattcttac--tctctcttcctttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgtt 18874841  T
Q  168 accaaataattgtacaaatatgattactct 197  Q
    | ||||| ||||| ||||||| ||| ||||    
T  18874840 agcaaatgattgttcaaatatcattgctct 18874811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 1580299 - 1580222
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    ||||||||||||||| |||||  ||||||||| |||| |||||||| |||||||||| ||||| |||| | |||||||    
T  1580299 catactcacattatcctcttattatctctcttcttttttctctctccattgtttttatccaatgaaaagagagaaaaa 1580222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 9095992 - 9096120
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||||||||||   |||||||| |||| || ||||| ||||||||| ||||||||||| |||||| || ||  || |   |||||||||     
T  9095992 catactcacattatcttcttattctctctcttattttttccctctccattgtttttgaccaataaaaa-aaagaacaacaaggttgtaccaaaagttgta 9096090  T
Q  168 accaaataattgtacaaatatgattactct 197  Q
     | |||||||||| ||||||| ||||||||    
T  9096091 tcaaaataattgttcaaatatcattactct 9096120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 196
Target Start/End: Complemental strand, 41609657 - 41609560
Alignment:
Q  99 ttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactc 196  Q
    |||||| |||||||||||||||||| |||||| |||| | |||||||| |  || ||| |||| |||||| |||||  |||| ||||||| |||||||    
T  41609657 ttttttctctctctctattgtttttgaccaattaaaagagagaaaaagtagattgtcacaaaaattgtcatcaaatggttgttcaaatatcattactc 41609560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 37022316 - 37022436
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    ||||||||||| ||  ||||| ||||||||||  ||| | |||||| ||||||||| ||||||||||| ||||||||| ||  ||||||  |||||||||    
T  37022316 catactcacatgatggtcttatcatctctcttcctttttatctctccattgtttttgaccaataaaaaaaaagaaaaacaagattatcactaaagttgtc 37022415  T
Q  168 accaaataattgtacaaatat 188  Q
    |  ||||   |||||||||||    
T  37022416 atgaaatggatgtacaaatat 37022436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 1728103 - 1728041
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttttatctctctctattgtttttaaccaataa 132  Q
    |||||| ||||||||||||||   ||||||||| || |||||||||||||||||| ||||||||    
T  1728103 catacttacattatcttcttattctctctctttctt-tctctctctattgtttttgaccaataa 1728041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 1868909 - 1868842
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||||||||||   ||||||||| ||| |||||||  ||| |||||||||||||||||    
T  1868909 catactcacattatcttcttattttctctctttctttttctctcttcattatttttaaccaataaaaa 1868842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 19910903 - 19910994
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    |||||||| ||| ||||| ||||||||||||||||||||| ||  | ||||  |||||| ||| ||||| | ||| ||||||| ||||||||    
T  19910903 tctctctccattatttttgaccaataaaaataaagaaaaataagataatcaacaaagttatcatcaaatgaatgtccaaatatcattactct 19910994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 22257212 - 22257145
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaa 135  Q
    ||||||||||||||| |||||   ||||||||  ||| ||||||||||||||||||||||||| ||||    
T  22257212 catactcacattatcatcttattctctctcttcctttttctctctctattgtttttaaccaatgaaaa 22257145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 44272826 - 44272750
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaag 146  Q
    |||||||||||||| |||||||  |||||||| |||| ||||||| |||||||||| |||||||| || | ||||||||    
T  44272826 catactcacattatattcttac--tctctcttcttttttctctctttattgtttttgaccaataataagagagaaaaag 44272750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 46792007 - 46791952
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgttttt 123  Q
    |||||||||||||||||||||  |||||||||  ||| ||||||||||||||||||    
T  46792007 catactcacattatcttcttattatctctcttcctttttctctctctattgttttt 46791952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 167
Target Start/End: Complemental strand, 46844233 - 46844158
Alignment:
Q  93 tctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||| |||| |||||||| ||||||||||||||||||||| | ||||||| ||| || |||  |||||||||    
T  46844233 tctctcttcttttttctctctccattgtttttaaccaataaaaagagagaaaaacaaagttgtcaccaaagttgtc 46844158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 3475962 - 3476052
Alignment:
Q  107 ctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    ||||||||||||||||| |||||| |||| ||||||||| ||  || ||| ||| ||||||| |||||  ||||  |||||| ||||||||    
T  3475962 ctctctctattgtttttgaccaatgaaaagaaagaaaaataaggttgtcacaaatgttgtcatcaaatggttgtcaaaatatcattactct 3476052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 8455996 - 8456038
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaa 148  Q
    |||||||||||||||||| ||||||||||| | ||||||||||    
T  8455996 tctctctctattgtttttgaccaataaaaagagagaaaaagaa 8456038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 17363285 - 17363383
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    |||||||||||||| ||||||   |||||||| |||| |||||||||||||||||  |||||| |||| | || ||| |||| || |||| ||||||||    
T  17363285 catactcacattatattcttattctctctcttcttttttctctctctattgttttggaccaatgaaaagagagcaaatgaaagttgtcatcaaagttgt 17363383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 22920287 - 22920189
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    |||||||||||||| ||||||   |||||||   ||| ||||| ||||||| |||| |||||| |||||| ||||||| ||| || |||||||||||||    
T  22920287 catactcacattatattcttattctctctctacctttttctctttctattgattttgaccaatcaaaatagagaaaaacaaagttgtcataaaagttgt 22920189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 22971512 - 22971610
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    |||||||||||||| ||||||   |||||||   ||| ||||| ||||||| |||| |||||| |||||| ||||||| ||| || |||||||||||||    
T  22971512 catactcacattatattcttattctctctctacctttttctctttctattgattttgaccaatcaaaatagagaaaaacaaagttgtcataaaagttgt 22971610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 39881046 - 39880948
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    |||||||||||||||||||||   ||||||||  ||| |||||||||||| ||||| |||||| |||| | ||||||  ||| || |||| ||||||||    
T  39881046 catactcacattatcttcttattctctctcttcatttttctctctctattatttttgaccaatcaaaagagagaaaaccaaagttgtcatgaaagttgt 39880948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 6126908 - 6127037
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||||||||||   ||||||||  ||| ||||||||||||||| || |||||||| || | |||||| | |  || ||| ||||||||||    
T  6126908 catactcacattatcttcttattctctctcttcatttttctctctctattgttcttgaccaataagaaaagagaaaaggtaggttgtcacaaaagttgtc 6127007  T
Q  168 accaaataattgtacaaatatgattactct 197  Q
    |  |||   |||| ||||||| ||||||||    
T  6127008 attaaaaggttgttcaaatatcattactct 6127037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 11064067 - 11064006
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||||||| ||| ||||||| |||||||| |||| || |||  |||||||||    
T  11064067 tctctctctattgtttttgaccgataaaaagaaagaaaatgaaagttgtcaccaaagttgtc 11064006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 17367377 - 17367422
Alignment:
Q  143 aaagaaatttatcataaaagttgtcaccaaataattgtacaaatat 188  Q
    ||||||| ||||||||||||||| ||| |||||||||| |||||||    
T  17367377 aaagaaaattatcataaaagttgacacaaaataattgttcaaatat 17367422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 18944334 - 18944382
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttttatctctctctattgtt 120  Q
    ||||||||||||||||||||||  ||||||||||   |||||||||||||||    
T  18944334 catactcacattatcttcttactctctctctttt---tctctctctattgtt 18944382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 19315001 - 19315042
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaagaaa 149  Q
    |||||||||||||||| |||||||| || |||||||||||||    
T  19315001 tctctctattgtttttgaccaataagaagaaagaaaaagaaa 19315042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 26440720 - 26440794
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaa 144  Q
    |||||||||||||| || ||||  ||||||||  ||| |||||||| ||||||||| ||||||||||| ||||||||    
T  26440720 catactcacattatatttttac--tctctcttcctttttctctctccattgtttttgaccaataaaaaaaaagaaaa 26440794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 29407053 - 29406925
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||| ||| ||||||  || ||||||  ||| |||||||||||| ||||| |||||| |||||| ||||||  ||| || |||| ||||||||     
T  29407053 catactcacaatattttcttattatatctcttcctttttctctctctattattttttaccaatcaaaatagagaaaaccaaaattgtcatgaaagttgt- 29406955  T
Q  168 accaaataattgtacaaatatgattactct 197  Q
    |||||| | ||||||| |||| | ||||||    
T  29406954 accaaagagttgtacatatatcactactct 29406925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 29949689 - 29949608
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaa 149  Q
    ||||||||||| || |||||| | ||||||||  ||| ||||| |||||||||||| |||||||| || | |||||||||||    
T  29949689 catactcacatgatgttcttatcctctctcttcctttttctctatctattgttttttaccaataagaagagagaaaaagaaa 29949608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 30042227 - 30042315
Alignment:
Q  108 tctctctattgtttttaaccaataaaaata-aagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactc 196  Q
    |||||||||||||||| |||||| ||| || | |||||| ||| |||||||||||||||| |  ||||| |||| ||||||| |||||||    
T  30042227 tctctctattgtttttgaccaatgaaattagaggaaaaaaaaagttatcataaaagttgt-atgaaatagttgttcaaatatcattactc 30042315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 145
Target Start/End: Original strand, 55899513 - 55899550
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  55899513 tctctctattgattttaaccaataaaaatagagaaaaa 55899550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 30890301 - 30890182
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||| ||||||||||||   ||||||||| ||| |||||||||||| || || |||| | |||||| ||||||  ||| || |||||||| ||||     
T  30890301 catactcatattatcttcttattctctctctttctttttctctctctattattcttgaccagtcaaaatagagaaaaccaaagttgtcataaaaattgt- 30890203  T
Q  168 accaaataattgtacaaatat 188  Q
    |||||| | ||||||| ||||    
T  30890202 accaaagagttgtacatatat 30890182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 30973641 - 30973716
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    ||||||||||||||| |||||   ||||||||| || | |||||| || |||||||||||||||||| | |||||||    
T  30973641 catactcacattatcctcttattttctctctttctttt-tctctccatagtttttaaccaataaaaagagagaaaaa 30973716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 36364801 - 36364737
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   ||||||||  ||| |||| ||||||||||||| ||||||||    
T  36364801 catactcacattatcttcttattctctctcttcctttttctccctctattgtttttgaccaataa 36364737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 36413342 - 36413224
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttttatctctctctattgtttttaaccaataaaaata-aagaaaaagaaatttatcataaaagttgtc 167  Q
    ||||||||||||||  |||||   |||||||| ||| |||||||| |||||||||||| ||| |||| | || ||||||||| || ||| |||||||||     
T  36413342 catactcacattatactcttattctctctcttctttttctctctccattgtttttaactaatgaaaagagaaaaaaaagaaa-ttgtcacaaaagttgt- 36413245  T
Q  168 accaaataattgtacaaatat 188  Q
    | |||||| |||| |||||||    
T  36413244 atcaaatagttgttcaaatat 36413224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 38864756 - 38864808
Alignment:
Q  145 agaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    ||||| || ||| |||||||||||| |||||||||||||||||| ||| ||||    
T  38864756 agaaagttgtcaaaaaagttgtcacaaaataattgtacaaatatcatttctct 38864808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 43358706 - 43358766
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    ||||||||||||| |||| |||||| |||||| ||||||| ||| || |||||||| ||||    
T  43358706 tctctctctattgattttgaccaatcaaaatagagaaaaacaaagttgtcataaaaattgt 43358766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 46566984 - 46567060
Alignment:
Q  69 catactcacattatcttcttaccatct-ctcttttttatctctctctattgtttttaaccaataaaaataaagaaaa 144  Q
    |||||||||||||| ||||||| |||| || || ||| |||||||| ||||||||| |||||| |||| | ||||||    
T  46566984 catactcacattatattcttactatctccttttctttttctctctccattgtttttgaccaatgaaaagagagaaaa 46567060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 9882639 - 9882555
Alignment:
Q  109 ctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgatta 193  Q
    |||| |||||||||| ||||||||||  ||||||||||||||||  |  ||||||||||||||||||||||||||||||| ||||    
T  9882639 ctctttattgtttttgaccaataaaacgaaagaaaaagaaatttgccgcaaaagttgtcaccaaataattgtacaaatatcatta 9882555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 51168784 - 51168664
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||| ||||||||| |||||||  |||||||| |||| |||||||| |||||||||||||||||| || | ||||||| ||| || |||||||||||||     
T  51168784 catattcacattatattcttactctctctcttcttttttctctctccattgtttttaaccaataagaaaagagaaaaaaaaaattgtcataaaagttgtt 51168685  T
Q  168 accaaataattgtacaaatat 188  Q
    | |||||  |||| |||||||    
T  51168684 agcaaatggttgttcaaatat 51168664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 7420727 - 7420818
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    ||||||||||||||| || |||||||| || | |||| || ||| || || ||||||||||||| |||||||||||||||||| ||||||||    
T  7420727 tctctctctattgttcttgaccaataagaaaagagaagaaaaaagttgtcctaaaagttgtcacgaaataattgtacaaatatcattactct 7420818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 6841847 - 6841946
Alignment:
Q  70 atactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtca 168  Q
    ||||||||||||| || |||  ||||||||| |||| |||||||| ||||||||| ||||||||||| | ||||||||||| || |||| | ||||||||    
T  6841847 atactcacattatgtttttattatctctcttcttttttctctctccattgtttttgaccaataaaaagagagaaaaagaaagttgtcatgatagttgtca 6841946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 21255801 - 21255666
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| |||||||  ||||||||| ||| |||||||| ||||||||| |||||| | || | |||||||| |  || |||||||||||||     
T  21255801 catactcacattatattcttactttctctctttctttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgtt 21255702  T
Q  168 accaaataattgtacaaatatgattactctattact 203  Q
    | |||||  |||| ||||||| ||| ||||| ||||    
T  21255701 agcaaatggttgttcaaatatcattgctctaatact 21255666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 41558048 - 41558176
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| || ||| | ||||||||  ||| | |||||||||||||||| |||||||| || |||||||| |||| || ||| || |||||||    
T  41558048 catactcacattatgtttttatcctctctcttcctttttgtctctctattgtttttgaccaataagaagaaagaaaaggaaagttgtcacaatagttgtc 41558147  T
Q  168 accaaataattgtacaaatatgattactct 197  Q
    | |||||  |||||||||||| | ||||||    
T  41558148 a-caaatggttgtacaaatatcactactct 41558176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 26839435 - 26839553
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| |||||||| ||||| || |||| |||||||| ||||||||| || |||||||| | |||||| |||  || ||||||||||| |     
T  26839435 catactcacattatattcttaccctctctattcttttttctctctccattgttttttactaataaaaa-agagaaaacgaaggttgtcataaaagttat- 26839532  T
Q  168 accaaataattgtacaaatat 188  Q
    ||||||| |||||| ||||||    
T  26839533 accaaatgattgtataaatat 26839553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 168
Target Start/End: Original strand, 39669861 - 39669961
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||| |||||| || || ||| ||||||| ||| ||| |||||||| |||||||| |||||||||||||| ||||||| ||| || |||| |||||||||    
T  39669861 catattcacataatgttattatcatctctatttctttttctctctccattgttttcaaccaataaaaatagagaaaaataaagttgtcatcaaagttgtc 39669960  T
Q  168 a 168  Q
    |    
T  39669961 a 39669961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 49621418 - 49621492
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttttatctctctctattgtttttaaccaataaaaataaagaaaa 144  Q
    |||||||||||| | ||||||| |||||| |||||| |||||||| ||||||||| ||||||||||| | ||||||    
T  49621418 catactcacattctattcttactatctctttttttt-tctctctccattgtttttgaccaataaaaagagagaaaa 49621492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 50460728 - 50460661
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||||||||||   ||||||||  ||| |||||||||||||||||| |||||||||||    
T  50460728 catactcacattatcttcttattctctctcttcctttttctctctctattgtttttgaccaataaaaa 50460661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 14002751 - 14002629
Alignment:
Q  76 acattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaat 174  Q
    ||||||| |||||||  ||||||||  ||| |||||||| ||| |||||||||||| |||| | |||||||  || || ||||||||||||| | |||||    
T  14002751 acattatattcttactctctctcttaatttttctctctccattatttttaaccaatgaaaagagagaaaaatgaaattgtcataaaagttgttagcaaat 14002652  T
Q  175 aattgtacaaatatgattactct 197  Q
    | |||| ||||||| | ||||||    
T  14002651 agttgttcaaatatcactactct 14002629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 41885776 - 41885874
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    |||||||||||||| ||||||   ||||||||| ||| |||||||| ||||||||| |||||| | |||| ||||||||||  || ||| |||||||||    
T  41885776 catactcacattatattcttattctctctctttctttttctctctccattgtttttgaccaatcagaatagagaaaaagaaggttgtcaaaaaagttgt 41885874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 198
Target Start/End: Original strand, 44730699 - 44730828
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||| ||||||||| |||||||| ||||||||  ||| ||||||||  ||||||||||||||| |||| | ||||||||||  || ||| ||| |||||     
T  44730699 catattcacattatattcttaccctctctcttcctttttctctctcctttgtttttaaccaatgaaaaaagagaaaaagaaggttgtcaaaaaggttgt- 44730797  T
Q  168 accaaataattgtacaaatatgattactcta 198  Q
    |||||||  |||| ||||||| ||| |||||    
T  44730798 accaaatggttgttcaaatatcattgctcta 44730828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 48390093 - 48390028
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttttatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||||||||||   ||| ||||| || | ||||||||||||||||||||||||||||    
T  48390093 catactcacattatcttcttattctctttctttctttt-tctctctattgtttttaaccaataaaaa 48390028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 25989000 - 25988904
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    |||||||||||||| |||||||  ||||||||  || | |||||| ||||||||| ||||||||||| | |||||||| |  ||||||| ||||||||    
T  25989000 catactcacattatattcttactctctctcttcctttt-tctctccattgtttttgaccaataaaaaaagagaaaaaggaggttatcattaaagttgt 25988904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 51172323 - 51172258
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaa 133  Q
    |||||||||||||| || ||||| |||||||| |||| |||||||| ||||||||| |||||||||    
T  51172323 catactcacattatattattaccctctctcttcttttttctctctccattgtttttgaccaataaa 51172258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 4604584 - 4604664
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaa 148  Q
    |||||||||||||| |||||||  ||||||||  ||| |||||||| ||||||||| |||||| |||| | ||||||||||    
T  4604584 catactcacattatattcttacgctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaagaa 4604664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 29489375 - 29489255
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    ||||||||||| ||  ||||| | |||||||| |||| |||||||| ||||||||| |||||||| || ||||||||| ||  || |||  |||||||||    
T  29489375 catactcacatgatggtcttatcctctctcttcttttttctctctccattgtttttgaccaataagaagaaagaaaaacaaggttgtcactaaagttgtc 29489276  T
Q  168 accaaataattgtacaaatat 188  Q
    |  |||||  |||||||||||    
T  29489275 atgaaatatatgtacaaatat 29489255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 30414919 - 30414983
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   ||||||||  ||| |||||||||||||||||| ||||||||    
T  30414919 catactcacattatcttcttattttctctcttcctttttctctctctattgtttttgaccaataa 30414983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 32873396 - 32873460
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   ||||||||  ||| |||||||||||||||||| ||||||||    
T  32873396 catactcacattatcttcttattctctctcttcctttgtctctctctattgttttttaccaataa 32873460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 40118731 - 40118659
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaag 140  Q
    |||||||||||||||||||||   |||||||| |||| |||||| | |||| |||||||||||||||| ||||    
T  40118731 catactcacattatcttcttattctctctcttcttttttctctccccattgattttaaccaataaaaagaaag 40118659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 48962041 - 48962105
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   ||||||||  ||| |||||||||||||||||| ||||||||    
T  48962041 catactcacattatcttcttattctctctcttcctttttctctctctattgtttttgaccaataa 48962105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 26101482 - 26101561
Alignment:
Q  100 tttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattg 179  Q
    ||||| |||||||||||| ||| | |||||||||||   ||||||| ||| || ||| ||||||| ||||||||||||||    
T  26101482 tttttttctctctctattatttgtgaccaataaaaaatgagaaaaataaaattgtcacaaaagttttcaccaaataattg 26101561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 36690588 - 36690489
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    ||||||||||||||| |||||  ||| ||||| |||| |||||||| ||||||||| |||||| |||||| ||| |||  || || ||| ||||||||||    
T  36690588 catactcacattatcctcttattatccctcttcttttttctctctccattgtttttgaccaatgaaaatagagagaaaataagttgtcacaaaagttgtc 36690489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 36706689 - 36706590
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    ||||||||||||||| |||||  ||| ||||| |||| |||||||| ||||||||| |||||| |||||| ||| |||  || || ||| ||||||||||    
T  36706689 catactcacattatcctcttattatccctcttcttttttctctctccattgtttttgaccaatgaaaatagagagaaaataagttgtcacaaaagttgtc 36706590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 36930770 - 36930692
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaa 148  Q
    |||||||||||||| |||||||  ||||||||  || | |||||| ||||||||| ||||||||||| | ||||||||||    
T  36930770 catactcacattatattcttactctctctcttcctttt-tctctccattgtttttgaccaataaaaagagagaaaaagaa 36930692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 44714320 - 44714363
Alignment:
Q  93 tctctcttt-tttatctctctctattgtttttaaccaataaaaa 135  Q
    ||||||||| |||||||||||||||||||||| |||||||||||    
T  44714320 tctctctttctttatctctctctattgtttttgaccaataaaaa 44714363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 194
Target Start/End: Complemental strand, 2854976 - 2854850
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||||||||||   ||| ||||  ||| |||||||||||| ||||| |||||||| || | |||||| | |  || ||| |||||||||     
T  2854976 catactcacattatcttcttattctctatcttcatttttctctctctattatttttgaccaataagaagagagaaaaggtagattgtcacaaaagttgtg 2854877  T
Q  168 accaaataattgtacaaatatgattac 194  Q
    || ||| |||||| ||||||| |||||    
T  2854876 actaaaaaattgttcaaatattattac 2854850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 31290224 - 31290126
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    ||||||||||||||||| |||   ||||||||  ||| |||||||| |||||||||||||||| |||| | |||||||  || || ||| |||||||||    
T  31290224 catactcacattatctttttattctctctcttcctttttctctctccattgtttttaaccaatgaaaaaagagaaaaaataagttgtcacaaaagttgt 31290126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 34941936 - 34941838
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    |||||||||||||| ||||||| |||||| ||  ||| |||||||| ||||||||| |||||||| || | ||| |||  || || |||||||||||||    
T  34941936 catactcacattatattcttactatctcttttcatttttctctctccattgtttttgaccaataagaagagagagaaatgaagttgtcataaaagttgt 34941838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 198
Target Start/End: Original strand, 40238493 - 40238623
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||| ||||||||| |||||||  |||||||| |||| |||||||| ||| ||||| |||||||| |  | |||||||  |  || |||| ||||||||     
T  40238493 catattcacattatattcttactttctctcttcttttttctctctccattatttttgaccaataatagaagagaaaaaagaggttgtcatcaaagttgtt 40238592  T
Q  168 accaaataattgtacaaatatgattactcta 198  Q
    | ||||| ||||| ||||||||||| |||||    
T  40238593 aacaaatgattgttcaaatatgattgctcta 40238623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 167
Target Start/End: Complemental strand, 51703102 - 51703029
Alignment:
Q  93 tctctcttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    ||||||||  || |||||||| |||||||||||||||| ||||  |||||||| ||| |||||| ||||||||||    
T  51703102 tctctcttccttttctctctccattgtttttaaccaatgaaaa-gaagaaaaaaaaaattatcacaaaagttgtc 51703029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 15061900 - 15061977
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    ||||||||||||||| |||||   ||||||||  ||| |||||||| |||||||||| |||||||||| | |||||||    
T  15061900 catactcacattatcatcttattctctctcttcctttttctctctccattgtttttatccaataaaaagagagaaaaa 15061977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 30505314 - 30505261
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaa 161  Q
    ||||||||||| |||| |||||| |||||||||||||| ||| || ||||||||    
T  30505314 tctctctattgattttgaccaatcaaaataaagaaaaacaaagttgtcataaaa 30505261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 30530415 - 30530287
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| ||||||  |||||||||  ||| ||| |||| ||||||||  |||||||| || | |||||| |||| || |||| |||||||||    
T  30530415 catactcacattatattcttattatctctcttcctttttctgtctccattgttttggaccaataagaagagagaaaatgaaagttgtcatcaaagttgtc 30530316  T
Q  168 accaaataattgtacaaatatgattactct 197  Q
     ||||||  ||||||| |||| | ||||||    
T  30530315 -ccaaatggttgtacatatatcactactct 30530287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 40596070 - 40595993
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    |||||||||||||| |||||||  ||||||||  ||| |||||||| ||||||||| |||||| |||| | |||||||    
T  40596070 catactcacattatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 40595993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 49425792 - 49425869
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    |||||||||||||| ||||||   ||||||||  ||| |||||||| |||||||||||||||| |||| | |||||||    
T  49425792 catactcacattattttcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaa 49425869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 13078937 - 13079021
Alignment:
Q  112 tctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactc 196  Q
    |||||||||||| ||||||||||| || |||||||||| || || ||||| || |||  ||||  || ||||||||| |||||||    
T  13078937 tctattgttttttaccaataaaaagaacgaaaaagaaaattgtcttaaaaattatcataaaatggttctacaaatatcattactc 13079021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 18648820 - 18648943
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    ||||||||||||||||| |||   |||||||| |||| ||| | || ||||||||| | |||||| || | ||||||| ||  || |||||||  ||||     
T  18648820 catactcacattatctttttattctctctcttcttttttctatttccattgttttttatcaataagaagagagaaaaaaaatattctcataaagattgt- 18648918  T
Q  168 accaaataattgtacaaatatgatt 192  Q
    ||||||||||||| |||||||||||    
T  18648919 accaaataattgttcaaatatgatt 18648943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 200
Target Start/End: Original strand, 23554806 - 23554938
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| ||||||   ||||||||  ||| |||||||| |||||||||||||||| |||  | |||||||  |  || |||| ||||||||     
T  23554806 catactcacattatattcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaggagagaaaaatgaggttgtcatgaaagttgtt 23554905  T
Q  168 accaaataattgtacaaatatgattactctatt 200  Q
    | |||||  |||| ||||||| ||| |||||||    
T  23554906 agcaaatggttgttcaaatatcattgctctatt 23554938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 24611899 - 24611967
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaat 136  Q
    ||||||||| |||| |||||| | ||||||||  ||| |||||||||||||||||  ||||||||||||    
T  24611899 catactcaccttatattcttaacctctctcttcctttttctctctctattgttttggaccaataaaaat 24611967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 25061788 - 25061868
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaa 148  Q
    |||||||| ||||| |||||||  | ||||||  ||| |||||||| |||||||||||||||| |||| | ||||||||||    
T  25061788 catactcatattatattcttactctttctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaagaa 25061868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 25098804 - 25098728
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaa 144  Q
    |||||||||||||| |||||||  ||||||||  ||| |||||||| ||||||||| |||||| |||| | ||||||    
T  25098804 catactcacattatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 25098728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 168
Target Start/End: Original strand, 25995515 - 25995615
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    ||||||||||| ||  ||||| | ||||||||  ||| |||||||| ||||||||| ||||||||||| | ||||||| ||  || |||| |||||||||    
T  25995515 catactcacatgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataaaaagagagaaaaataaggttgtcattaaagttgtc 25995614  T
Q  168 a 168  Q
    |    
T  25995615 a 25995615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 27352685 - 27352761
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaa 144  Q
    |||||||||||||| |||||||  ||||||||  ||| |||||||| ||||||||| |||||| |||| | ||||||    
T  27352685 catactcacattatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 27352761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 29638770 - 29638834
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   ||||||||  ||| || ||||||||||||||| ||||||||    
T  29638770 catactcacattatcttcttattctctctcttcctttttccctctctattgtttttgaccaataa 29638834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 32821690 - 32821766
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaa 144  Q
    |||||||||||||| |||||||  ||||||||| ||  |||||||| ||||||||| |||||| |||| | ||||||    
T  32821690 catactcacattatattcttactctctctctttcttcttctctctccattgttttttaccaatgaaaagagagaaaa 32821766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 33111927 - 33111862
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttt-tatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||| ||||||   ||||||||||| | |||||||||||| ||||| |||||||||||    
T  33111927 catactcacattatattcttat--tctctctttttctttctctctctattatttttgaccaataaaaa 33111862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 43853357 - 43853409
Alignment:
Q  114 tattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    |||||||||| |||||||| || ||| ||||| ||| ||||||||||||||||    
T  43853357 tattgtttttgaccaataagaagaaaaaaaaaaaaaattatcataaaagttgt 43853409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 188
Target Start/End: Complemental strand, 50035550 - 50035434
Alignment:
Q  73 ctcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcacca 171  Q
    ||||||| || || ||| ||||||||||  ||| |||||||||||| ||||| |||||||| || | ||||||| ||| || |||  ||||||||||  |    
T  50035550 ctcacatgatatttttatcatctctcttcctttttctctctctattctttttgaccaataacaaaagagaaaaataaagttgtcactaaagttgtcatga 50035451  T
Q  172 aataattgtacaaatat 188  Q
    ||||  |||||||||||    
T  50035450 aatagatgtacaaatat 50035434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 50528073 - 50527993
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaa 148  Q
    |||||||||||||| |||||||  ||| ||||  ||| |||||||| ||||||||| |||||| |||| | ||||||||||    
T  50528073 catactcacattatattcttactctctttcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaagaa 50527993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 174
Target Start/End: Original strand, 37710459 - 37710565
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||||||||||| |||||||||  ||| |||||||||||| ||||| ||||||||||| | ||||||||||  || | | ||||||||||    
T  37710459 catactcacattatcttcttactatctctcttcctttttctctctctattatttttgaccaataaaaagagagaaaaagaagattgttacaaaagttgtc 37710558  T
Q  168 accaaat 174  Q
    | |||||    
T  37710559 aacaaat 37710565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 194
Target Start/End: Original strand, 29525288 - 29525412
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtca 168  Q
    ||||||||||||||||||||| | ||||||||| || | |||||||||||||||| ||||||||||| | |||||| | |  |||||| ||||| |||||    
T  29525288 catactcacattatcttcttatcctctctctttctttt-tctctctattgtttttgaccaataaaaagagagaaaaggtaggttatcacaaaagctgtca 29525386  T
Q  169 ccaaataattgtacaaatatgattac 194  Q
    | |||   |||| ||||||| |||||    
T  29525387 ctaaaaggttgttcaaatatcattac 29525412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 44689858 - 44689925
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||||||||||   |||||||| |||| |||||||||||||||||| |||||||||||    
T  44689858 catactcacattatcttcttattctctctcttcttttttctctctctattgtttttgaccaataaaaa 44689925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 188
Target Start/End: Complemental strand, 1031401 - 1031324
Alignment:
Q  110 tctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatat 188  Q
    |||| ||||||||| |||||||| || ||||||||| ||| || ||||||||||||| ||||||||||||| |||||||    
T  1031401 tctccattgtttttgaccaataagaagaaagaaaaataaagttgtcataaaagttgt-accaaataattgttcaaatat 1031324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 8627912 - 8628005
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaa 161  Q
    |||||||||||||||||||||   |||||| || ||| | |||||||||| |||| ||||||||| || ||||||||| ||| |||||||||||    
T  8627912 catactcacattatcttcttattctctctcattatttttttctctctattattttcaaccaataagaagaaagaaaaacaaaattatcataaaa 8628005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 7230 - 7150
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaa 148  Q
    |||||||||||||| |||||| | ||||||||  ||| |||||||| ||||||||| ||||||||||| | ||||||||||    
T  7230 catactcacattatattcttatcctctctcttcctttttctctctccattgtttttgaccaataaaaaaagagaaaaagaa 7150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 30723 - 30640
Alignment:
Q  114 tattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactcta 198  Q
    |||||||||| | ||||||||| ||||| ||| ||  |||||| ||||| ||||||||||| ||||||||||||| |||||||||    
T  30723 tattgttttttatcaataaaaa-aaagataaaaaaggttatcacaaaagatgtcaccaaatgattgtacaaatatcattactcta 30640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 34900695 - 34900771
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaa 144  Q
    |||||||||||||| ||||||  |||||||||| ||| |||||||||||| ||||| |||||||| || ||||||||    
T  34900695 catactcacattattttcttattatctctctttctttttctctctctattattttttaccaataagaagaaagaaaa 34900771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 41309055 - 41309135
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaa 148  Q
    ||||||||||||||| |||||   |||||||| |||| |||||||| |||||||||||||||| |||| | ||||||||||    
T  41309055 catactcacattatcctcttattctctctcttcttttttctctctccattgtttttaaccaatgaaaagatagaaaaagaa 41309135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 44127208 - 44127088
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| |||||||  ||||||||  ||| |||||||| |||||||||||||||| | || | |||||||  |  || |||||||||||||     
T  44127208 catactcacattatattcttactctctctcttaatttttctctctccattgtttttaaccaatgagaagagagaaaaatgaggttgtcataaaagttgtt 44127109  T
Q  168 accaaataattgtacaaatat 188  Q
    | |||||| |||| |||||||    
T  44127108 agcaaatagttgttcaaatat 44127088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 20549401 - 20549334
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaa 135  Q
    |||| ||||||||||||||||   ||||||||| ||| |||||||||||||||||| |||||||||||    
T  20549401 catattcacattatcttcttattctctctctttctttttctctctctattgtttttgaccaataaaaa 20549334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 51385456 - 51385389
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||||||||||  ||||||||| |||| |||||||| ||||||||| |||||| ||||    
T  51385456 catactcacattatcttcttattatctctcttcttttttctctctccattgtttttgaccaatgaaaa 51385389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 12762915 - 12762827
Alignment:
Q  112 tctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcacca---aataattgtacaaatatgattactct 197  Q
    |||||||||||| ||||||||||| | ||||||||||| || |||||||| ||||||| |   | ||||||| ||||||| ||||||||    
T  12762915 tctattgttttttaccaataaaaagagagaaaaagaaagttgtcataaaaattgtcacaaattattaattgttcaaatatcattactct 12762827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 35756073 - 35756159
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgatt 192  Q
    |||||||| |||||||||||||||||| || | ||||||| ||| || |||  ||||||||||  |||||  |||||||||||||||    
T  35756073 tctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtcaccaaagttgtcatgaaatagatgtacaaatatgatt 35756159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 40785715 - 40785637
Alignment:
Q  69 catactcacattatcttcttaccatctctc-ttttttatctctctctattgtttttaaccaataaaaataaagaaaaag 146  Q
    |||||||||||||| ||||||| ||||||| |  ||| |||||||| ||||||||| |||||| |||||| ||||||||    
T  40785715 catactcacattatattcttactatctctcatcatttttctctctccattgtttttgaccaatgaaaatagagaaaaag 40785637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 43900773 - 43900657
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| ||||||   ||||||||  ||| |||||||| |||||||| ||||||||||   ||| ||||| ||| ||||||| |||||||||    
T  43900773 catactcacattatattcttattctctctcttcctttttctctctccattgttttgaaccaataaa---aaaaaaaaaaaaagttatcatcaaagttgtc 43900677  T
Q  168 accaaataattgtacaaatat 188  Q
     |||||||||| |||| ||||    
T  43900676 -ccaaataattctacatatat 43900657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 197
Target Start/End: Original strand, 44910790 - 44910888
Alignment:
Q  99 ttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    |||||| |||||||||||||||||| |||||||| || | |||||| | || || ||| |||| ||||||| |||  ||||| ||||||| ||||||||    
T  44910790 ttttttctctctctctattgtttttgaccaataagaagagagaaaatgtaagttgtcacaaaaattgtcactaaaagattgttcaaatatcattactct 44910888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 198
Target Start/End: Original strand, 47683845 - 47683975
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||| | |||||||   |||||||  ||| |||||||||| ||||||| |||||||| || | ||||| ||||  || ||  ||||||||||    
T  47683845 catactcacattgtgttcttactccctctcttcgtttttctctctctaatgtttttgaccaataagaagagagaaagagaaggttgtctcaaaagttgtc 47683944  T
Q  168 accaaataattgtacaaatatgattactcta 198  Q
    || ||||  |||||||||||| |||||||||    
T  47683945 acaaaatggttgtacaaatatcattactcta 47683975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 52678569 - 52678511
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    ||||||||||| ||||||||||| |||||| ||||||| ||| ||||||| ||||||||    
T  52678569 tctctctattgattttaaccaatcaaaatagagaaaaacaaagttatcatgaaagttgt 52678511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 35987324 - 35987425
Alignment:
Q  96 ctcttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattact 195  Q
    ||||||||| | |||||| ||| ||||| ||||||||||| | ||||||||||  || |||||||| |||| | ||||| ||||| ||||||| ||| ||    
T  35987324 ctcttttttttttctctccattatttttgaccaataaaaagatagaaaaagaaggttgtcataaaaattgtaagcaaatgattgttcaaatatcattgct 35987423  T
Q  196 ct 197  Q
    ||    
T  35987424 ct 35987425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 42102289 - 42102422
Alignment:
Q  66 tcacatactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagtt 164  Q
    ||||||||||| ||||| ||||||   ||||||||  ||| |||||||| ||||||||| ||||||||||| |||||||||  |  || |||| ||||||    
T  42102289 tcacatactcagattatattcttattctctctcttcctttttctctctccattgtttttgaccaataaaaaaaaagaaaaatgaggttgtcatgaaagtt 42102388  T
Q  165 gtcaccaaataattgtacaaatatgattactcta 198  Q
    || | |||||  |||| ||||||| ||| |||||    
T  42102389 gttagcaaatggttgttcaaatatcattgctcta 42102422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 161
Target Start/End: Complemental strand, 55344312 - 55344219
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaa 161  Q
    ||||||| |||||| || ||| ||||||||||  ||| ||||||||||||||||||||||||| |||| | ||||||  ||| || ||||||||    
T  55344312 catactcgcattatatttttatcatctctcttcatttttctctctctattgtttttaaccaatgaaaagagagaaaagaaaagttgtcataaaa 55344219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 1295387 - 1295467
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaa 148  Q
    |||||||||||||| |||||||  ||||| ||  ||| |||||||||||||||||| |||||| |||| | ||||||||||    
T  1295387 catactcacattatattcttactctctctgttcctttttctctctctattgtttttgaccaatgaaaagatagaaaaagaa 1295467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 14839061 - 14838994
Alignment:
Q  69 catactcacattatcttcttaccatctctctttt---ttatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||||||||||   ||||||||||   || |||||||||||||||||| |||||||||||    
T  14839061 catactcacattatcttcttat--tctctcttttcctttttctctctctattgtttttgaccaataaaaa 14838994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 29800565 - 29800446
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||| ||||||| || ||||| ||||||||| ||| |||||||| ||| ||||| |||||| |||| | ||||||||||  || ||| | | |||||     
T  29800565 catacttacattatatttttaccctctctctttctttttctctctccattatttttgaccaatgaaaagagagaaaaagaagattttcaaataggttgt- 29800467  T
Q  168 accaaataattgtacaaatat 188  Q
    ||||||||||||| |||||||    
T  29800466 accaaataattgttcaaatat 29800446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 35765282 - 35765322
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaagaa 148  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  35765282 tctctctattatttttaaccaataaaaagaaagaaaaagaa 35765322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 37585486 - 37585550
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   |||||||| |||| ||||||| |||||||||| ||||||||    
T  37585486 catactcacattatcttcttattctctctcttcttttttctctctttattgtttttgaccaataa 37585550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 49886742 - 49886838
Alignment:
Q  93 tctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatat 188  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| | |||| || ||  || || ||||||||||    ||||| ||||||||||||    
T  49886742 tctctctttctttttctctctctattgtttttaaccaataaaaaaagagaataataaggttgtcctaaaagttgtttaaaaatagttgtacaaatat 49886838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 16675966 - 16675903
Alignment:
Q  131 aaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattac 194  Q
    ||||||| ||||||||||  || ||| ||||||| ||| ||||||||||||||||||| |||||    
T  16675966 aaaaatagagaaaaagaaggttgtcacaaaagttatcatcaaataattgtacaaatatcattac 16675903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 197
Target Start/End: Complemental strand, 27198132 - 27198041
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    |||||||| |||||||||||||||| |||| | |||||||  |  || ||||||||||||| | ||||| ||||| ||||||| ||| ||||    
T  27198132 tctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgtcataaaagttgttagcaaatgattgttcaaatatcattgctct 27198041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 27276789 - 27276856
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaa 135  Q
    |||| ||||||||||||||||   ||||||||| ||| |||||||| ||||||||||| |||||||||    
T  27276789 catattcacattatcttcttattctctctctttctttttctctctccattgtttttaatcaataaaaa 27276856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 32687969 - 32687847
Alignment:
Q  76 acattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatca-taaaagttgtcaccaaa 173  Q
    ||||||||||||||   ||||||||  ||| |||||||| |||||||||||||||| |||| | |||||||  || ||||||  ||||||||| | ||||    
T  32687969 acattatcttcttattctctctcttcatttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttatcaccaaaagttgt-atcaaa 32687871  T
Q  174 taattgtacaaatatgattactct 197  Q
    || |||| ||||||| ||||||||    
T  32687870 tagttgttcaaatatcattactct 32687847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 35368666 - 35368733
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||||||||||   ||||||||  ||| |||||||||||||||||| |||||| ||||    
T  35368666 catactcacattatcttcttattctctctcttcctttttctctctctattgttttttaccaatgaaaa 35368733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 43977121 - 43977196
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgta 181  Q
    ||||||||||||||||||| |||||||||| ||| ||||| | | || ||| ||||||| | |||||||| |||||    
T  43977121 tctctctctattgtttttagccaataaaaagaaaaaaaaaaatagttgtcacaaaagttattaccaaatagttgta 43977196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 30664558 - 30664623
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttttatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||||||||||   ||||||||  || | |||||||||||||||| |||||||||||    
T  30664558 catactcacattatcttcttattttctctcttcctttt-tctctctattgtttttgaccaataaaaa 30664623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 33971938 - 33972000
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaat 130  Q
    |||||||||||||||||||||   | ||||||| ||| |||||||| ||||||||||||||||    
T  33971938 catactcacattatcttcttattttttctctttctttttctctctccattgtttttaaccaat 33972000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 45150282 - 45150152
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaaga-aaaagaaatttatcataaaagttgt 166  Q
    |||||||||||||| |||||||  ||| |||| |||| |||||||| ||| ||||| ||||||||||| | ||| | || ||| || |||| ||||||||    
T  45150282 catactcacattatattcttactctctttcttcttttctctctctccattatttttgaccaataaaaagagagagagaaaaaagttttcatgaaagttgt 45150183  T
Q  167 caccaaataattgtacaaatatgattactct 197  Q
     | ||||| ||||| ||||||| ||| ||||    
T  45150182 tagcaaatgattgttcaaatatcatttctct 45150152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 6126509 - 6126586
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    ||||||||||||||| |||||   ||||||||  ||| |||||||| |||||||||||||||| |||| | |||||||    
T  6126509 catactcacattatcctcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaa 6126586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 14207430 - 14207507
Alignment:
Q  69 catactcacattatcttcttaccatctctctttttt-atctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    ||||||||||||||  |||||   |||||||| ||| ||||||||| ||||||||| ||||||||||| | |||||||    
T  14207430 catactcacattatactcttattctctctcttctttcatctctctccattgtttttgaccaataaaaagagagaaaaa 14207507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 14215178 - 14215255
Alignment:
Q  69 catactcacattatcttcttaccatctctctttttt-atctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    ||||||||||||||  |||||   |||||||| ||| ||||||||| ||||||||| ||||||||||| | |||||||    
T  14215178 catactcacattatactcttattctctctcttctttcatctctctccattgtttttgaccaataaaaagagagaaaaa 14215255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 25959558 - 25959477
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaa 149  Q
    |||||||||||||| || |||| |||||||||  ||| |||||||| ||||||||| |||||| |||| | |||||| ||||    
T  25959558 catactcacattatatttttactatctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaatgaaa 25959477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 26021961 - 26021900
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcac 169  Q
    |||||||||||||||| ||||||||||| ||| ||||||||  || ||  ||||||||||||    
T  26021961 tctctctattgttttttaccaataaaaagaaacaaaaagaagattgtctcaaaagttgtcac 26021900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 41717302 - 41717261
Alignment:
Q  157 taaaagttgtcaccaaataattgtacaaatatgattactcta 198  Q
    ||||||||||||| |||||||||||||||||| ||| |||||    
T  41717302 taaaagttgtcactaaataattgtacaaatatcatttctcta 41717261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 46473183 - 46473311
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    ||||||||||||||  |||||   ||||||||  ||| |||||||| ||||||||| |||||| |||| | |||||||  || || |||||||||||||     
T  46473183 catactcacattattatcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcataaaagttgt- 46473281  T
Q  168 accaaataattgtacaaatatgattactct 197  Q
    | |||||  |||| ||||||| ||||||||    
T  46473282 atcaaatggttgttcaaatatcattactct 46473311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 46626658 - 46626747
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    |||||||||||||||| ||||||| ||| ||| ||||  ||| || |||  |||||||||| ||| ||  ||||||||||| ||||||||    
T  46626658 tctctctattgtttttgaccaatagaaaaaaataaaagcaaagttgtcaccaaagttgtcatcaattagatgtacaaatatcattactct 46626747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 1901942 - 1901866
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaa 144  Q
    |||||||||||||| |||||||  ||||||||  ||| |||||||| ||||||||| |||||| |||| | ||||||    
T  1901942 catactcacattatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 1901866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 1911388 - 1911312
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaa 144  Q
    |||||||||||||| |||||||  ||||||||  ||| |||||||| ||||||||| |||||| |||| | ||||||    
T  1911388 catactcacattatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 1911312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 29555854 - 29555793
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttttatctctctctattgtttttaaccaataa 132  Q
    ||||||||||||||||||||    |||||||| ||| |||||||||||||||||| || |||||    
T  29555854 catactcacattatcttctttt--tctctcttctttttctctctctattgtttttgactaataa 29555793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 38692302 - 38692250
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaa 160  Q
    |||||||||||||||| |||||||| || | ||||||||||| || |||||||    
T  38692302 tctctctattgtttttgaccaataagaagatagaaaaagaaagttgtcataaa 38692250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 198
Target Start/End: Original strand, 31467692 - 31467789
Alignment:
Q  101 ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactcta 198  Q
    |||| ||||| ||||||||||||||||||||| || | |||||| |||| |||||| ||||||||||| ||||  ||||||||||||| |||| ||||    
T  31467692 ttttttctctttctattgtttttaaccaataagaaaagagaaaatgaaagttatcacaaaagttgtcatcaaacgattgtacaaatatcattaatcta 31467789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 44187746 - 44187875
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| |||||||  |||||||| |||| |||||||| ||||||||| |||||| |||| |||||| || ||| || |||| ||||||||     
T  44187746 catactcacattatattcttactctctctcttcttttttctctctccattgtttttgaccaatgaaaaaaaagaacaataaagttgtcatgaaagttgtt 44187845  T
Q  168 accaaataattgtacaaatatgattactct 197  Q
    |  ||||| |||| ||||||| ||| ||||    
T  44187846 agtaaatagttgttcaaatattattgctct 44187875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 27688692 - 27688811
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| ||||||| |||||||||| ||| |||||||| ||||||||| |||||| |||| | |||||| |||  || ||| | |  ||||     
T  27688692 catactcacattatattcttactatctctctttctttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaatagattgt- 27688790  T
Q  168 accaaataattgtacaaatat 188  Q
    |||||||||||||||||||||    
T  27688791 accaaataattgtacaaatat 27688811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 168
Target Start/End: Original strand, 2323348 - 2323448
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    ||||||||||| || | |||| ||||||||||  ||| |||||||||||||||||| |||||| |||| ||||||||| ||| || ||| ||| ||||||    
T  2323348 catactcacatgatgtacttatcatctctcttcatttttctctctctattgtttttgaccaatgaaaagaaagaaaaataaaattctcacaaatgttgtc 2323447  T
Q  168 a 168  Q
    |    
T  2323448 a 2323448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 23034329 - 23034265
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   |||||||| |||| |||||||||||||||||| ||||||||    
T  23034329 catactcacattatcttcttattctctctcttcttttttctctctctattgtttttgaccaataa 23034265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 197
Target Start/End: Complemental strand, 10591126 - 10591035
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    |||||||||||||||||| | |||||| |||| |||||| |    || |||||||||||||||||||||| |||| ||||||| ||| ||||    
T  10591126 tctctctctattgtttttgatcaataagaatagagaaaaggtgggttgtcataaaagttgtcaccaaatagttgttcaaatatcattgctct 10591035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 47425001 - 47424934
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaa 135  Q
    ||||||||||||||| |||||  |||||||||  ||| |||||||| |||||||||||||||||||||    
T  47425001 catactcacattatcctcttattatctctcttcctttttctctctccattgtttttaaccaataaaaa 47424934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 198
Target Start/End: Original strand, 17500752 - 17500881
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| ||||||   ||||||||  ||| |||||||| ||||||||  |||||||| || | |||||| |||| ||||||| |||||||||    
T  17500752 catactcacattatattcttattctctctcttcatttttctctctccattgttttggaccaataagaagagagaaaatgaaagttatcatcaaagttgtc 17500851  T
Q  168 accaaataattgtacaaatatgattactcta 198  Q
     ||||||  ||||||| |||| | |||||||    
T  17500852 -ccaaatggttgtacatatatcactactcta 17500881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 198
Target Start/End: Complemental strand, 17552462 - 17552333
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| ||||||   ||||||||  ||| |||||||| ||||||||  |||||||| || | |||||| |||| ||||||| |||||||||    
T  17552462 catactcacattatattcttattctctctcttcatttttctctctccattgttttggaccaataagaagagagaaaatgaaagttatcatcaaagttgtc 17552363  T
Q  168 accaaataattgtacaaatatgattactcta 198  Q
     ||||||  ||||||| |||| | |||||||    
T  17552362 -ccaaatggttgtacatatatcactactcta 17552333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 21839149 - 21839072
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    ||||||||||||||  |||||  |||||||||| ||| |||||||| |||||||||||||||| |||| | |||||||    
T  21839149 catactcacattatactcttattatctctctttctttttctctctccattgtttttaaccaatgaaaaaagagaaaaa 21839072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 195
Target Start/End: Original strand, 32315919 - 32316008
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattact 195  Q
    |||||||||||||||||| |||||||| || | ||||||| ||  || ||| ||||||||||  |||||| |||| ||||||| ||||||    
T  32315919 tctctctctattgtttttgaccaataagaagagagaaaaacaatgttgtcacaaaagttgtcgtcaaatagttgttcaaatatcattact 32316008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 33890760 - 33890643
Alignment:
Q  70 atactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtca 168  Q
    ||||||| ||||| || ||||||||||||||| ||| |||||  ||||| |||||||| |||||||| | ||||||| |  ||| ||| || ||| |||     
T  33890760 atactcaaattatatttttaccatctctctttctttttctcttactattatttttaacaaataaaaagagagaaaaatatttttgtcacaatagtcgtcc 33890661  T
Q  169 ccaaataattgtacaaat 186  Q
    |||||| |||||||||||    
T  33890660 ccaaatgattgtacaaat 33890643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 37149453 - 37149392
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||||||| |||||||| || ||||||||| ||  || ||||||||||||||    
T  37149453 tctctctctattgttttttaccaataagaagaaagaaaaacaaggttgtcataaaagttgtc 37149392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 42640897 - 42641017
Alignment:
Q  68 acatactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    |||||||||||||||||| |||   ||| ||||  ||| |||||||||||| ||||| |||||| |||| | ||||||  ||| ||||||||||||||||    
T  42640897 acatactcacattatctttttattctctttcttcatttttctctctctattatttttgaccaatcaaaaaagagaaaatcaaagttatcataaaagttgt 42640996  T
Q  167 caccaaataattgtacaaatat 188  Q
     |||||| | ||||||| ||||    
T  42640997 -accaaagagttgtacatatat 42641017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 24380737 - 24380673
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   |||||||| |||| ||||||| |||||||||| ||||||||    
T  24380737 catactcacattatcttcttattctctctcttcttttttctctctttattgtttttgaccaataa 24380673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 27075525 - 27075647
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtca 168  Q
    |||| ||||||||||||||||  ||||||   |||| || ||||||||| ||||| |||||| |||| | ||||||  ||| |||||||||||||||| |    
T  27075525 catattcacattatcttcttattatctcttcctttt-tcactctctattatttttgaccaatcaaaagagagaaaaccaaaattatcataaaagttgt-a 27075622  T
Q  169 ccaaataattgtacaaatatgatta 193  Q
    ||||| | ||||||| |||| ||||    
T  27075623 ccaaagagttgtacatatatcatta 27075647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 27202786 - 27202664
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtca 168  Q
    |||| ||||||||||||||||  ||||||   |||| || ||||||||| ||||| |||||| |||| | ||||||  ||| |||||||||||||||| |    
T  27202786 catattcacattatcttcttattatctcttcctttt-tcactctctattatttttgaccaatcaaaagagagaaaaccaaaattatcataaaagttgt-a 27202689  T
Q  169 ccaaataattgtacaaatatgatta 193  Q
    ||||| | ||||||| |||| ||||    
T  27202688 ccaaagagttgtacatatatcatta 27202664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 41910201 - 41910137
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   ||||||||  ||| |||||||||||||||||| ||||||||    
T  41910201 catactcacattatcttcttattctctctcttcctttttctctctctattgtttttgaccaataa 41910137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 49014377 - 49014309
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaat 174  Q
    |||||||  ||||||||| ||||||||||||| |||||||||  ||| || ||||||||||||| ||||    
T  49014377 tctctctacattgtttttgaccaataaaaatagagaaaaagatgtttgtcctaaaagttgtcacaaaat 49014309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 6655631 - 6655553
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaa 148  Q
    |||||||||||||| |||||||| |||| ||  ||| |||||||| |||||||||||||||| |||| | | ||||||||    
T  6655631 catactcacattatattcttaccctctc-ctcctttttctctctccattgtttttaaccaatgaaaagagataaaaagaa 6655553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 12102725 - 12102626
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||| ||||||||||||   ||||||||  ||| |||||||| |||||||||||||||| |||| | |||||||  || || ||| ||||||||||    
T  12102725 catactcatattatcttcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaataagttgtcacaaaagttgtc 12102626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 4678118 - 4678196
Alignment:
Q  69 catactcacattatcttcttaccatctctc-ttttttatctctctctattgtttttaaccaataaaaataaagaaaaag 146  Q
    |||||||||||||| |||||||  |||||| |  ||| |||||||| ||||||||| |||||| |||||| ||||||||    
T  4678118 catactcacattatattcttactctctctcatcctttttctctctccattgtttttgaccaatgaaaatagagaaaaag 4678196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 197
Target Start/End: Complemental strand, 25332484 - 25332387
Alignment:
Q  99 ttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    |||||| |||||||| |||||||||||||||||||||  | ||||||| || ||||||  |||||||| | |||||  |||| ||||||| ||| ||||    
T  25332484 ttttttttctctctccattgtttttaaccaataaaaaggaggaaaaag-aagttatcaataaagttgttagcaaatggttgttcaaatattattgctct 25332387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 44175622 - 44175680
Alignment:
Q  91 catctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaa 148  Q
    ||||||||||| ||| |||||||| ||||||||| |||||||| || ||||||||||||    
T  44175622 catctctctttctttttctctctccattgtttttgaccaataagaagaaagaaaaagaa 44175680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 49143557 - 49143655
Alignment:
Q  70 atactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    ||||||||||||  ||||||  ||| ||||| |||| |||||||| ||||||||| || ||| |||| |||||||||  || |||| ||||||||||||    
T  49143557 atactcacattagattcttattatcactcttcttttttctctctccattgttttttactaatgaaaagaaagaaaaatgaagttattataaaagttgtc 49143655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 198
Target Start/End: Complemental strand, 10014938 - 10014841
Alignment:
Q  101 ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactcta 198  Q
    |||| |||||||| ||||||||| ||||||||||| | ||||||| ||| || |||  |||||||||| ||| |   ||||||||||| | |||||||    
T  10014938 ttttttctctctccattgtttttgaccaataaaaagagagaaaaacaaaattgtcaccaaagttgtcatcaattggatgtacaaatatcactactcta 10014841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 27331043 - 27330915
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||||||||||   |||||||| |||| | |||||||||| ||||| ||||||  ||| | | ||||  ||| ||||||| ||||||||     
T  27331043 catactcacattatcttcttattctctctcttcttttttttctctctattatttttgaccaatctaaagataaaaaattaaaattatcatgaaagttgt- 27330945  T
Q  168 accaaataattgtacaaatatgattactct 197  Q
    |||||| | ||||||| |||| | ||||||    
T  27330944 accaaagagttgtacatatatcactactct 27330915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 37325835 - 37325758
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    ||||||||||| ||  ||||| | || ||||| |||| |||||||| ||||||||||||||||||||| | |||||||    
T  37325835 catactcacatgatagtcttatcctcactcttcttttttctctctccattgtttttaaccaataaaaagagagaaaaa 37325758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 37352006 - 37351929
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    ||||||||||||||  |||||   |||||||| |||| |||||||| ||||||||| ||||||||||| | |||||||    
T  37352006 catactcacattattctcttattctctctcttcttttttctctctccattgtttttgaccaataaaaagagagaaaaa 37351929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 37392098 - 37392175
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    |||||||||||||| ||||||   ||||||||  ||| |||||||| |||||||||||||||| |||| | |||||||    
T  37392098 catactcacattatattcttattttctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaa 37392175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 12141977 - 12142037
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    ||||| |||||||||||| |||||| |||| ||||||||| ||| || ||| |||||||||    
T  12141977 tctctttctattgtttttgaccaatgaaaagaaagaaaaaaaaagttgtcacaaaagttgt 12142037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 18157201 - 18157125
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaa 144  Q
    |||||||||||||| |||||||  ||||||||  ||| |||||||| ||||||||| |||||| |||| | ||||||    
T  18157201 catactcacattatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 18157125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 23816374 - 23816414
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaag 146  Q
    ||||||||||||||||||| |||||||||| | ||||||||    
T  23816374 tctctctctattgtttttatccaataaaaaaagagaaaaag 23816414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 31329332 - 31329272
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    |||||||| |||||||||||||||||||| || |||||||  |  || |||||||||||||    
T  31329332 tctctctccattgtttttaaccaataaaattagagaaaaatgagattgtcataaaagttgt 31329272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 35590773 - 35590737
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaa 142  Q
    ||||||||||||||||||||||||||| || ||||||    
T  35590773 tctctctctattgtttttaaccaataataagaaagaa 35590737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 40077334 - 40077430
Alignment:
Q  93 tctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatat 188  Q
    |||||||| |||| |||||||  ||||||||| |||||||| || |||||||||| |  || ||||||||||||| | |||||  |||| |||||||    
T  40077334 tctctcttcttttttctctcttcattgtttttgaccaataagaagaaagaaaaaggaggttgtcataaaagttgttaacaaatggttgttcaaatat 40077430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 47530267 - 47530187
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatat 188  Q
    |||||| |||||||||| ||||||| || ||||||||| ||  ||||||  ||||||||||  |||||  |||||||||||    
T  47530267 tctctccattgtttttagccaataagaagaaagaaaaacaaggttatcaccaaagttgtcatgaaatagatgtacaaatat 47530187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 48639399 - 48639338
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaata 131  Q
    |||||||||||||||||||||   ||||||||  ||| |||||||||||||||||| |||||||    
T  48639399 catactcacattatcttcttat--tctctcttcctttttctctctctattgtttttgaccaata 48639338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 164
Target Start/End: Original strand, 42716375 - 42716471
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagtt 164  Q
    |||||||||||||||||||||   ||||||||  ||| |||||||| ||||||||| ||||||||||| |||||||||  || ||||||||||||||    
T  42716375 catactcacattatcttcttattctctctcttcatttttctctctccattgtttttgaccaataaaaaaaaagaaaaaataaattatcataaaagtt 42716471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 30578309 - 30578429
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    ||||||||| |||| |||||||  |||||||| |||| |||||||| ||||||||| |||||| | || | |||||||| |  || |||| |||||||||    
T  30578309 catactcacgttatattcttactctctctcttcttttttctctctccattgtttttgaccaatgataagagagaaaaaggaggttgtcatcaaagttgtc 30578408  T
Q  168 accaaataattgtacaaatat 188  Q
    | ||||||||||| |||||||    
T  30578409 agcaaataattgttcaaatat 30578429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 6849277 - 6849179
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    |||||||||||||| |||||||  ||||||||  ||| ||||| ||  |||||||| ||||||||||| | ||||||||||| || |||||||||||||    
T  6849277 catactcacattatattcttactctctctcttcctttttctctatccgttgtttttgaccaataaaaaaagagaaaaagaaagttgtcataaaagttgt 6849179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 21273726 - 21273628
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    |||||||||||||| || |||  ||||||||| |||| ||||||||||||||||||||||||| |||| | ||||||  ||| || ||| |||||||||    
T  21273726 catactcacattatgtttttattatctctcttcttttttctctctctattgtttttaaccaatgaaaagagagaaaagaaaagttgtcacaaaagttgt 21273628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 158
Target Start/End: Original strand, 40997712 - 40997804
Alignment:
Q  69 catactcacattatcttcttaccatctctct---tttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcata 158  Q
    |||||||||||||| ||||||  ||||||||   ||||| ||||||||||||| |||| |||||| |||||| ||||||| ||| ||||||||    
T  40997712 catactcacattatattcttattatctctctacctttttttctctctctattgattttgaccaattaaaatagagaaaaacaaaattatcata 40997804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 295601 - 295678
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    |||||||||||||| ||||||  |||||||||  ||| |||||||||||||||||| |||||| |||||| |||||||    
T  295601 catactcacattattttcttattatctctcttcctttttctctctctattgtttttgaccaatgaaaatagagaaaaa 295678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 37294649 - 37294713
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   |||||||| |||| |||||||||||||||||| ||||||||    
T  37294649 catactcacattatcttcttattctctctcttcttttttctctctctattgtttttgaccaataa 37294713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 36497754 - 36497845
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    |||||||||||||||||||||||||||||| | ||||||| ||  || | || |||||||||| ||| ||  ||||||||||| | ||||||    
T  36497754 tctctctctattgtttttaaccaataaaaagagagaaaaacaaggttgttatcaaagttgtcatcaattagatgtacaaatatcactactct 36497845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 9431301 - 9431203
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    |||||||||||||  ||||||  |||||||| | ||| ||||||||||||| |||| |||||| |||||| ||||||| ||| || |||||||| ||||    
T  9431301 catactcacattacattcttattatctctctatctttttctctctctattgattttgaccaatcaaaatagagaaaaacaaaattgtcataaaaattgt 9431203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 36675419 - 36675509
Alignment:
Q  107 ctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    ||||||||||||||||| |||||||| || |||||| || ||| |||||  || ||||||||  |||| ||||| ||||||| ||||||||    
T  36675419 ctctctctattgtttttgaccaataacaagaaagaacaacaaagttatcccaagagttgtcatgaaatgattgttcaaatatcattactct 36675509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 32175009 - 32175082
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaaga 141  Q
    ||||||||||||||| |||||   ||||||||  ||| |||||||| ||||||||||||||||||||| |||||    
T  32175009 catactcacattatcctcttattctctctcttcatttttctctctccattgtttttaaccaataaaaaaaaaga 32175082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 7376616 - 7376676
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    ||||||||||||| |||| |||||| |||||| ||||||| ||| || |||||||||||||    
T  7376616 tctctctctattgattttgaccaatcaaaatagagaaaaataaaattgtcataaaagttgt 7376676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 9985694 - 9985630
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   ||||||||  ||| |||||||||||||||||| ||||||||    
T  9985694 catactcacattatcttcttattctctctcttcctttttctctctctattgtttttgaccaataa 9985630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 196
Target Start/End: Complemental strand, 20995074 - 20994946
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||| ||||||||||||||   ||||||||  ||| |||||||||||||||||| |||||||| || | |||||| | |  || ||| ||||||||||    
T  20995074 catacttacattatcttcttattctctctcttcctttttctctctctattgtttttgaccaataagaagagagaaaaggtaggttgtcacaaaagttgtc 20994975  T
Q  168 accaaataattgtacaaatatgattactc 196  Q
    |||| |   |||| ||||||| |||||||    
T  20994974 accagaaggttgttcaaatatcattactc 20994946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 25430701 - 25430765
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   ||||||||  ||| |||||||||||||||||| ||||||||    
T  25430701 catactcacattatcttcttattctctctcttcctttttctctctctattgtttttgaccaataa 25430765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 34838286 - 34838222
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   ||||||||  ||| |||||||||||||||||| ||||||||    
T  34838286 catactcacattatcttcttattctctctcttcctttttctctctctattgtttttgaccaataa 34838222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 6243089 - 6243156
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||||||||||   |||||||| |||| |||||||| ||||||||| |||||| ||||    
T  6243089 catactcacattatcttcttattctctctcttcttttttctctctccattgtttttgaccaatgaaaa 6243156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 168
Target Start/End: Complemental strand, 8074716 - 8074641
Alignment:
Q  93 tctctcttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtca 168  Q
    ||||||||| || | ||||||||||||||| ||||||||| || | |||||| |||| || |||| ||||||||||    
T  8074716 tctctctttcttttttctctctattgttttgaaccaataagaagagagaaaatgaaagttgtcatcaaagttgtca 8074641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 168
Target Start/End: Original strand, 23952549 - 23952648
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtca 168  Q
    |||||||||||  | |||||| | ||||| ||| || |||||||| ||| ||||| ||||||||||| | ||||||| ||| ||||||  ||||||||||    
T  23952549 catactcacatgttgttcttatcttctctatttcttttctctctccattatttttgaccaataaaaaaagagaaaaacaaaattatcactaaagttgtca 23952648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 197
Target Start/End: Original strand, 33511698 - 33511785
Alignment:
Q  110 tctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    |||||||||||||| |||||||| || | |||| |||||  || ||  ||||||| |||| ||||| |||||||||||| ||||||||    
T  33511698 tctctattgtttttgaccaataagaagagagaagaagaatgttgtcccaaaagttttcacaaaatagttgtacaaatatcattactct 33511785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 40608606 - 40608661
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaa 161  Q
    ||||||||||||| |||| |||||| |||||||||||||| ||| || ||||||||    
T  40608606 tctctctctattgattttgaccaatcaaaataaagaaaaacaaaattgtcataaaa 40608661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 200
Target Start/End: Original strand, 10344421 - 10344515
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactctatt 200  Q
    |||||| | ||| ||||| ||||||||||| ||||||||| ||  || ||||||||||||| | ||||||  |||||| |||| | |||||||||    
T  10344421 tctctccccattatttttgaccaataaaaagaaagaaaaacaaggttgtcataaaagttgttatcaaatagatgtacatatatcactactctatt 10344515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 44672211 - 44672130
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatat 188  Q
    |||||||| |||||||||||||||| |||| | |||||||  ||| | ||| ||||||||| | ||||||||||| |||||||    
T  44672211 tctctctccattgtttttaaccaatgaaaagagagaaaaaagaatgtgtcacaaaagttgt-atcaaataattgttcaaatat 44672130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 154383 - 154444
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||||||| ||||||||||| | |||||| |||| || ||| || |||||||    
T  154383 tctctctctattgtttttgaccaataaaaagagagaaaatgaaagttgtcacaatagttgtc 154444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 7596869 - 7596824
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatt 151  Q
    |||||||| ||||||||| ||||||||||| | |||||||||||||    
T  7596869 tctctctccattgtttttgaccaataaaaagatagaaaaagaaatt 7596824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 37471700 - 37471765
Alignment:
Q  71 tactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||||||||   |||||||| |||| |||||||| ||||||||| |||||| ||||    
T  37471700 tactcacattatcttcttattctctctcttcttttttctctctccattgtttttgaccaatgaaaa 37471765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 40723419 - 40723354
Alignment:
Q  131 aaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactc 196  Q
    ||||| ||||||||  ||| || |||||||| |||||| ||||| ||||||||||||| |||||||    
T  40723419 aaaaaaaaagaaaataaaagttgtcataaaaattgtcatcaaatgattgtacaaatatcattactc 40723354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 5925148 - 5925216
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaat 174  Q
    |||||||| ||| ||||| |||||||| |||| ||||||| ||  || ||||||||||||||| |||||    
T  5925148 tctctctccattatttttgaccaataagaatagagaaaaataaggttgtcataaaagttgtcatcaaat 5925216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 26629087 - 26629047
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaag 146  Q
    ||||||||||||||||||  ||||||| |||||||||||||    
T  26629087 tctctctctattgtttttgtccaataagaataaagaaaaag 26629047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 27300401 - 27300465
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataa 132  Q
    |||| ||||||||||||||||   ||||||||  ||| |||||||||||||||||| ||||||||    
T  27300401 catattcacattatcttcttattctctctcttcctttttctctctctattgtttttgaccaataa 27300465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 37568599 - 37568551
Alignment:
Q  97 tcttttttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    |||||| | |||||||||||||||||| |||||||| || |||||||||    
T  37568599 tcttttctctctctctctattgtttttgaccaataagaaaaaagaaaaa 37568551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 44380630 - 44380554
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaa 144  Q
    |||||||||||||| |||| ||  ||||||||  ||| |||||||||||||||||| |||||| |||| | ||||||    
T  44380630 catactcacattatattctgactctctctcttactttttctctctctattgtttttgaccaatcaaaaaagagaaaa 44380554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 337173 - 337301
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| |||||||  ||||||||  ||| |||||||| ||||||||| ||||||||||| | ||||||||||| || | | |||  ||||     
T  337173 catactcacattatattcttactctctctcttcctttttctctctccattgtttttgaccaataaaaaaagagaaaaagaaaattgtaaaaaatattgt- 337271  T
Q  168 accaaataattgtacaaatatgattactct 197  Q
    ||||||||||||| ||||||| ||| ||||    
T  337272 accaaataattgttcaaatatcattgctct 337301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 6742426 - 6742297
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||| |||||||||||||||||  ||||||||  ||| |||||||||| | ||||| |||||||| || | ||| ||||||  || ||| ||||||||||    
T  6742426 catattcacattatcttcttactttctctcttcctttttctctctctactatttttgaccaataagaagagagagaaagaagattgtcacaaaagttgtc 6742327  T
Q  168 accaaataattgtacaaatatgattactct 197  Q
    | ||||| ||||||||| ||| ||||||||    
T  6742326 aacaaatgattgtacaattatcattactct 6742297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 8555307 - 8555179
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtca 168  Q
    |||||||||||||| |||||||  |||||||| ||| | |||||| ||||||||| | |||| |||| | |||||||| |  || |||||||||||||      
T  8555307 catactcacattatattcttactctctctcttctttttttctctccattgtttttgatcaatgaaaagagagaaaaaggaggttgtcataaaagttgttg 8555208  T
Q  169 ccaaataattgtacaaatatgattactct 197  Q
     ||||||||||| ||||||| ||| ||||    
T  8555207 gcaaataattgttcaaatatcattgctct 8555179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 30974007 - 30973908
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    ||||||||||||||||||||  ||||||||||  ||| |||||||| ||||||||| |||||||||||   ||||||| ||| ||||||| ||| |||||    
T  30974007 catactcacattatcttcttttcatctctcttcctttttctctctccattgtttttgaccaataaaaagtgagaaaaacaaagttatcatcaaaattgtc 30973908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 199
Target Start/End: Complemental strand, 10550437 - 10550344
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactctat 199  Q
    |||||||| ||||||||| ||||||||||||| ||||||| ||| || |||  |||||||||| |||||   ||| ||||||| ||||||||||    
T  10550437 tctctctccattgtttttgaccaataaaaatagagaaaaacaaagttgtcaacaaagttgtcatcaaatggatgtccaaatatcattactctat 10550344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 17267631 - 17267574
Alignment:
Q  112 tctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcac 169  Q
    |||||||||||| ||||||||||||| |||||| |||  |||||||||||||||||||    
T  17267631 tctattgtttttgaccaataaaaatagagaaaatgaatgttatcataaaagttgtcac 17267574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 39737664 - 39737611
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaa 161  Q
    ||||||||||| ||||||||||| |||||||||||||| ||| |||||||||||    
T  39737664 tctctctattgattttaaccaattaaaataaagaaaaacaaagttatcataaaa 39737611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 35798264 - 35798336
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaag 140  Q
    |||||| ||||||||||||||   ||||||||| ||| |||||||| ||||||||||||||||||||| ||||    
T  35798264 catacttacattatcttcttattctctctctttctttttctctctccattgtttttaaccaataaaaagaaag 35798336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 38598365 - 38598301
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   |||||||| |||| |||||||||||||||||| ||||||||    
T  38598365 catactcacattatcttcttattctctctcttcttttttctctctctattgtttttgaccaataa 38598301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 18508133 - 18508200
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||||||||||   ||||||||  ||| |||||||||||||||||| |||||||||||    
T  18508133 catactcacattatcttcttattctctctcttcctttttctctctctattgtttttgaccaataaaaa 18508200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 195
Target Start/End: Original strand, 36795785 - 36795911
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||| ||||||  || | |||| |||| || ||||||||| ||||| ||||||||||| | |||||| ||||  |||||| |||||||||    
T  36795785 catactcacattatattcttattatttttcttcttttttccctctctattatttttgaccaataaaaaaagagaaaatgaaagctatcatcaaagttgtc 36795884  T
Q  168 accaaataattgtacaaatatgattact 195  Q
     | ||||| ||||||| |||| ||||||    
T  36795885 -ctaaatagttgtacatatatcattact 36795911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 24491691 - 24491629
Alignment:
Q  71 tactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||   ||||||||| ||| ||||| |||||||||||||||||||||    
T  24491691 tactcacattatcttcttattctctctctttctttttctctttctattgtttttaaccaataa 24491629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 38464499 - 38464569
Alignment:
Q  99 ttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcac 169  Q
    |||||| | ||||||||| |||||| ||||||||||| | |||||| |||| |||||| ||||||||||||    
T  38464499 ttttttttttctctctatagtttttgaccaataaaaaaagagaaaaggaaagttatcacaaaagttgtcac 38464569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 41353513 - 41353436
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    ||||||||||||||  ||||| ||| ||||||| ||| |||||||| ||| ||||||||||||||||| | |||||||    
T  41353513 catactcacattatactcttatcatttctctttctttttctctctccattatttttaaccaataaaaaaagagaaaaa 41353436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 1096359 - 1096295
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||| ||  |||||||||| ||| ||||| |||||||||||| ||||||||    
T  1096359 catactcacattatcttcctattatctctctttatttttctctttctattgtttttgaccaataa 1096295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 8757599 - 8757663
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   ||||||||| ||| |||||||| ||||||||| ||||||||    
T  8757599 catactcacattatcttcttattctctctctttctttttctctctccattgtttttgaccaataa 8757663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 12256956 - 12257020
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   ||||||||  ||| |||||||||||||||||| ||||||||    
T  12256956 catactcacattatcttcttattctctctcttcatttttctctctctattgtttttgaccaataa 12257020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 20534039 - 20533959
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatat 188  Q
    |||||||||| |||| ||| |||||||| | | ||||||||| || ||| |||||||||||| |||||||| || ||||||    
T  20534039 tctctctattattttcaacaaataaaaagagaaaaaaagaaaattgtcacaaaagttgtcactaaataattataaaaatat 20533959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 198
Target Start/End: Complemental strand, 33030080 - 33029988
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactcta 198  Q
    |||||||| |||||||| |||||||||||||| ||||||| ||  || |||| ||||||||||  | |||  ||||||||||| ||| |||||    
T  33030080 tctctctccattgttttcaaccaataaaaatagagaaaaacaaggttgtcatcaaagttgtcattagatagatgtacaaatatcattgctcta 33029988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 34101084 - 34101148
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaa 172  Q
    |||||||||| ||||| ||||||||||||| || ||| |||| ||||| | ||||||||||||||    
T  34101084 tctctctattatttttgaccaataaaaatagaggaaatgaaagttatcttgaaagttgtcaccaa 34101148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 44484672 - 44484552
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    ||||||||||| || |||||| ||||||||||  ||| |||||||| ||||||||| |||||||| || | ||||||| ||| || |||  |||||||||    
T  44484672 catactcacatgatgttcttatcatctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtc 44484573  T
Q  168 accaaataattgtacaaatat 188  Q
    |  ||||   |||||||||||    
T  44484572 ataaaattgatgtacaaatat 44484552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 9521901 - 9521846
Alignment:
Q  143 aaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactcta 198  Q
    ||||||| || |||||||||| ||||| |||||||||||||||||| ||| |||||    
T  9521901 aaagaaaattgtcataaaagtagtcacaaaataattgtacaaatattatttctcta 9521846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 18749379 - 18749312
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||| || |||   ||||||||| ||| |||||||||||||||||| |||||||||||    
T  18749379 catactcacattatttttttattctctctctttctttttctctctctattgtttttgaccaataaaaa 18749312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 18949107 - 18949185
Alignment:
Q  114 tattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgatta 193  Q
    |||||||||| ||||||||||| |||||||||| || || ||| ||||||||| |  ||||| |||||||||||| ||||    
T  18949107 tattgtttttgaccaataaaaagaaagaaaaag-aagttgtcacaaaagttgttatgaaatagttgtacaaatattatta 18949185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 19523417 - 19523350
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||||||||||   ||||||||  ||| |||||||| ||||||||| |||||||||||    
T  19523417 catactcacattatcttcttattctctctcttcctttttctctctccattgtttttgaccaataaaaa 19523350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 37631382 - 37631263
Alignment:
Q  70 atactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtca 168  Q
    ||||||||||||| |||||||  ||||||||| ||| |||||||| ||||||||| |||||| | || | |||||||  |  || ||||||||||||| |    
T  37631382 atactcacattatattcttactctctctctttctttttctctctccattgtttttgaccaatgagaagagagaaaaaagaggttgtcataaaagttgtta 37631283  T
Q  169 ccaaataattgtacaaatat 188  Q
     |||||  |||| |||||||    
T  37631282 gcaaatggttgttcaaatat 37631263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 197
Target Start/End: Complemental strand, 43791769 - 43791678
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    |||||||||||||||||| ||||||||||| | |||||| | |  || ||| |||||||||||| |||   |||| ||||||| ||||||||    
T  43791769 tctctctctattgtttttgaccaataaaaagagagaaaaggtaggttgtcacaaaagttgtcactaaaaggttgttcaaatatcattactct 43791678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 25997743 - 25997627
Alignment:
Q  69 catactcacattatcttcttaccatctct-cttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    ||||||||| |||| || |||| |||||| |||||||   |||||||||||||||| ||||||||||| | ||||||  ||| || ||| ||||| ||||    
T  25997743 catactcacgttatgtttttactatctcttctttttt---tctctctattgtttttgaccaataaaaagagagaaaataaaagttgtcacaaaag-tgtc 25997648  T
Q  168 accaaataattgtacaaatat 188  Q
    ||| | | |||||||||||||    
T  25997647 acctattgattgtacaaatat 25997627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 196
Target Start/End: Original strand, 26809546 - 26809673
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaata-aaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    |||||||||||||| || |||   ||||||||| ||| |||||||| ||||||||||||||||| ||||  |||||||  ||| ||||||  ||| ||||    
T  26809546 catactcacattatgtttttat--tctctctttctttttctctctccattgtttttaaccaatagaaaaataagaaaatcaaaattatcaccaaaattgt 26809643  T
Q  167 caccaaataattgtacaaatatgattactc 196  Q
    ||| | |||  ||||||||||| |||||||    
T  26809644 cactatatagatgtacaaatatcattactc 26809673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 31635826 - 31635764
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaat 130  Q
    |||||||||||||||||||||  |||||||||  ||| |||||||||||| ||||| ||||||    
T  31635826 catactcacattatcttcttattatctctcttcctttttctctctctattatttttgaccaat 31635764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 188
Target Start/End: Original strand, 32128223 - 32128303
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatat 188  Q
    |||||||| ||||||||| ||||||||||| | ||||||| ||| ||||||||||  |||| |||||||| |||| |||||||    
T  32128223 tctctctcaattgtttttgaccaataaaaagagagaaaaa-aaaattatcataaagattgt-accaaatagttgttcaaatat 32128303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 200
Target Start/End: Original strand, 35518368 - 35518462
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactctatt 200  Q
    |||||||||||||||||| |||||||| || | |||| || ||| || ||  |||||||||  | ||||| |||| ||||||| |||||||||||    
T  35518368 tctctctctattgtttttgaccaataagaagagagaacaacaaagttgtcccaaaagttgtatcaaaatagttgttcaaatatcattactctatt 35518462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 38689002 - 38689044
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaa 148  Q
    |||||||||||||||||||||||||||||| | ||| ||||||    
T  38689002 tctctctctattgtttttaaccaataaaaagagagagaaagaa 38689044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 39285932 - 39286006
Alignment:
Q  93 tctctcttttttat-ctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    |||||||| ||||| ||||||| ||||||||||||||||||||| | |||||||  || || ||| |||||||||    
T  39285932 tctctcttctttattctctctccattgtttttaaccaataaaaaaagagaaaaaagaagttgtcacaaaagttgt 39286006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 11164368 - 11164260
Alignment:
Q  93 tctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgat 191  Q
    ||||||||| ||| |||||||| |||||||||||||||| |||| | |||||||  || || ||| ||||||||| | |||||| |||| ||||||| |     
T  11164368 tctctctttatttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt-atcaaatagttgttcaaatatcac 11164270  T
Q  192 tactctatta 201  Q
     |||||||||    
T  11164269 cactctatta 11164260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 26321713 - 26321636
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    ||||||||||||||| |||||   ||||||||  ||| |||||||| |||||||||||||||| |||| | |||||||    
T  26321713 catactcacattatcatcttattctctctcttcctttttctctctcaattgtttttaaccaatgaaaagagagaaaaa 26321636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 36383517 - 36383594
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    ||||||||||| || |||||| ||||||||||  ||| |||||||| ||||||||| |||||||| || | |||||||    
T  36383517 catactcacatgatgttcttatcatctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaa 36383594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 45515584 - 45515535
Alignment:
Q  99 ttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaa 148  Q
    |||||| |||||||| |||||||||||||||| |||| | ||||||||||    
T  45515584 ttttttttctctctccattgtttttaaccaatgaaaagagagaaaaagaa 45515535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 5455468 - 5455392
Alignment:
Q  70 atactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    ||||||||||||||||||||   ||||||||  ||| ||| |||| |||||||||||||||| |||| | |||||||    
T  5455468 atactcacattatcttcttattctctctcttcctttttctttctccattgtttttaaccaatgaaaagagagaaaaa 5455392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 11126519 - 11126637
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||||||||||   ||||||||  ||| || ||||| ||||||||| | |||||| || ||||||||| ||| || ||||||| ||||      
T  11126519 catactcacattatcttcttattctctctcttcctttttccctctccattgtttttgatcaataagaagaaagaaaaataaa-ttgtcataaaggttg-a 11126616  T
Q  168 accaaataattgtacaaatat 188  Q
    ||||||| ||||| |||||||    
T  11126617 accaaatgattgttcaaatat 11126637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 38027631 - 38027567
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataa 132  Q
    |||| ||||||||||||||||   ||||||||  ||| |||||||||||||||||| ||||||||    
T  38027631 catattcacattatcttcttattctctctcttcctttttctctctctattgtttttgaccaataa 38027567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 39744572 - 39744512
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgt 166  Q
    ||||||||||||| |||| |||||| |||||| ||||||| ||| || |||| ||||||||    
T  39744572 tctctctctattgattttgaccaatcaaaatagagaaaaacaaagttgtcatgaaagttgt 39744512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 40951248 - 40951321
Alignment:
Q  69 catactcacattatcttcttaccatctctcttttttatctctctctattgtttttaaccaataaaaataaagaaaa 144  Q
    |||||||||||||| |||||||  | |||||| ||| |||||||| ||||||||| |||||| |||| | ||||||    
T  40951248 catactcacattatattcttac--tatctcttctttttctctctccattgttttttaccaatgaaaagagagaaaa 40951321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 43486793 - 43486757
Alignment:
Q  161 agttgtcaccaaataattgtacaaatatgattactct 197  Q
    ||||||||  |||||||||||||||||||||||||||    
T  43486793 agttgtcataaaataattgtacaaatatgattactct 43486757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 17346 - 17226
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||| ||||||  |||||||  | ||||||| ||| ||| |||| ||||||||| ||||||||||| | ||||||||||  |||||||| ||||||||    
T  17346 catacttacattacattcttactctttctctttatttttctatctccattgtttttgaccaataaaaaaagagaaaaagaaggttatcatataagttgtc 17247  T
Q  168 accaaataattgtacaaatat 188  Q
     | ||||| |||| |||||||    
T  17246 gctaaatagttgttcaaatat 17226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 48709 - 48773
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   ||||||||| ||| |||||||||||||||||| ||||||||    
T  48709 catactcacattatcttcttattctctctctttctttttctctctctattgtttttgaccaataa 48773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 4923039 - 4923107
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaat 174  Q
    |||||||| ||| |||||||||||||| || | ||||||| ||| |||||||||||||||||| |||||    
T  4923039 tctctctcaattatttttaaccaataagaagagagaaaaacaaaattatcataaaagttgtcatcaaat 4923107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 17442878 - 17442941
Alignment:
Q  70 atactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataa 132  Q
    ||||||||||||||||||||  ||||||||| |||| |||||||||||||||||| | ||||||    
T  17442878 atactcacattatcttcttattatctctcttcttttttctctctctattgtttttgatcaataa 17442941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 27790251 - 27790184
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaa 135  Q
    |||||||||||||||||||||   |||||||| |||| ||||||| |||||||||| |||||||||||    
T  27790251 catactcacattatcttcttattctctctcttcttttttctctctatattgtttttgaccaataaaaa 27790184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 12277906 - 12277849
Alignment:
Q  84 ttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaag 140  Q
    |||||| ||||||||||  ||| |||||||||||||||||||||||||||||| ||||    
T  12277906 ttcttatcatctctcttcatttctctctctctattgtttttaaccaataaaaaaaaag 12277849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 2340485 - 2340552
Alignment:
Q  99 ttttttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||| |||||||||||||||  ||||||||||| | ||||||||||| |||| | ||||||||||    
T  2340485 ttttttat-tctctctattgttttcgaccaataaaaagagagaaaaagaaaattattacaaaagttgtc 2340552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 32729944 - 32730024
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaa 148  Q
    |||||||||||||| |||||||  ||||||||  ||| |||||||||||||||||| | |||| |||| | ||||||||||    
T  32729944 catactcacattatattcttactctctctcttcctttttctctctctattgtttttgatcaatgaaaagagagaaaaagaa 32730024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 30796069 - 30796010
Alignment:
Q  110 tctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcac 169  Q
    |||||||||||||| |||||||| || ||||||| ||||| || ||||| ||||||||||    
T  30796069 tctctattgtttttgaccaataagaaaaaagaaatagaaagttgtcatacaagttgtcac 30796010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 9395353 - 9395291
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaat 130  Q
    |||||||||||||||||||||   |||||||| |||| |||||||| ||||||||| ||||||    
T  9395353 catactcacattatcttcttattctctctcttcttttttctctctccattgtttttgaccaat 9395291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 203
Target Start/End: Original strand, 3401181 - 3401269
Alignment:
Q  114 tattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactctattact 203  Q
    |||||||||| ||||||||||| | ||||||  ||  || ||| |||||| || | ||||||||||||||||||| ||||||||| ||||    
T  3401181 tattgttttttaccaataaaaa-agagaaaagaaagattgtcacaaaagtcgttatcaaataattgtacaaatatcattactctactact 3401269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 17835705 - 17835766
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||| |||||||||||||||||| || | ||||||| ||| || |||| |||||||||    
T  17835705 tctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtcattaaagttgtc 17835766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 32853160 - 32853083
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaaa 145  Q
    ||||||||||||||  |||||   |||||||| |||| |||||||| |||||||||||||||| |||| | |||||||    
T  32853160 catactcacattatactcttattctctctcttcttttttctctctcaattgtttttaaccaatgaaaaaagagaaaaa 32853083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 164
Target Start/End: Complemental strand, 10387833 - 10387737
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagtt 164  Q
    ||||||||||||||| |||||   ||| | ||| ||| ||||||||| |||||||| ||||||||||| | |||||||  || |||||| |||||||    
T  10387833 catactcacattatcgtcttattctctatttttctttttctctctctgttgtttttgaccaataaaaagatagaaaaaagaaattatcacaaaagtt 10387737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 12151873 - 12151809
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataa 132  Q
    |||||||||||||||||||||   ||||||||  ||| |||||||| ||||||||| ||||||||    
T  12151873 catactcacattatcttcttattctctctcttcatttttctctctccattgtttttgaccaataa 12151809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 31934138 - 31934106
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataa 138  Q
    |||||||||||||||||| ||||||||||||||    
T  31934138 tctctctctattgtttttgaccaataaaaataa 31934106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 32253873 - 32253964
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaaga-aaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    |||||||| |||||||||||||||| |||| | ||| |||| ||| || ||| ||||||||| |||||||| |||| ||||||| | ||||||    
T  32253873 tctctctccattgtttttaaccaatgaaaagagagagaaaaaaaaattgtcacaaaagttgt-accaaatagttgttcaaatatcactactct 32253964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 204463 - 204358
Alignment:
Q  69 catactcacattatcttcttaccatctctcttt-tttatctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtc 167  Q
    |||||||||||||||||| ||   ||||||||  ||| |||| ||||||||||||| |||||||| || | |||||||| |  || ||| ||||||||||    
T  204463 catactcacattatcttcctattctctctcttcctttttctccctctattgtttttgaccaataagaagagagaaaaagtagattgtcacaaaagttgtc 204364  T
Q  168 accaaa 173  Q
    ||||||    
T  204363 accaaa 204358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 199321 - 199397
Alignment:
Q  69 catactcacattatcttcttaccatctctct-tttttatctctctctattgtttttaaccaataaaaataaagaaaa 144  Q
    |||||||||||||| ||||||  |||||||  ||||| |||||||||||||||||  ||||||||||| | ||||||    
T  199321 catactcacattatattcttattatctctccatttttctctctctctattgttttggaccaataaaaagagagaaaa 199397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 197
Target Start/End: Complemental strand, 15166 - 15077
Alignment:
Q  106 tctctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    |||||||| |||||||||||||||| |||| | |||||||| || || ||| ||||||||| |||||||| |||| ||||||| | ||||||    
T  15166 tctctctccattgtttttaaccaatgaaaaaagagaaaaag-aagttgtcacaaaagttgt-accaaatagttgttcaaatatcactactct 15077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 18099 - 18186
Alignment:
Q  108 tctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcataaaagttgtcaccaaataattgtacaaatatgattactct 197  Q
    |||||| |||||||||||||||| |||| | ||||||| ||| || ||||||||||||| | |||||| |||| ||||||| | ||||||    
T  18099 tctctccattgtttttaaccaatgaaaagagagaaaaa-aaagttgtcataaaagttgt-atcaaatagttgttcaaatatcactactct 18186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 440773 - 440849
Alignment:
Q  69 catactcacattatcttcttaccatctctctt-ttttatctctctctattgtttttaaccaataaaaataaagaaaa 144  Q
    |||||||||||| | |||||||  |||||||| |||| |||||||| ||||||||| |||||| |||| | ||||||    
T  440773 catactcacattctattcttactctctctcttcttttttctctctccattgttttttaccaatgaaaagagagaaaa 440849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University