View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21257_low_23 (Length: 247)
Name: NF21257_low_23
Description: NF21257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21257_low_23 |
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Alignment Details
Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 221
Target Start/End: Original strand, 8200745 - 8200948
Alignment:
| Q |
18 |
atcacacactactttcactttcacattcacatcaatttagaatctatttgcagttacattccaaccctacttttcctttcatagcaaataacacattacc |
117 |
Q |
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| T |
8200745 |
atcacacactactttcactttcacattcacatcaatttagaatctatttgcagttacattccaaccctacttttcctttcatagcaaataacacatttcc |
8200844 |
T |
|
| Q |
118 |
tatttaggaaaccctcttcacatcacttcactcctcctttacgagtcacacaccagtatagtacaagtgtgatgacactatagtttagtttcattgcaat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8200845 |
tatttaggaaaccctcttcacatcacttcactcctcctttacgagtcacacaccagtatagtacaagtgtgatgacactatagtttagtttcattgcaat |
8200944 |
T |
|
| Q |
218 |
ctag |
221 |
Q |
| |
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|||| |
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| T |
8200945 |
ctag |
8200948 |
T |
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