View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21258_high_2 (Length: 427)

Name: NF21258_high_2
Description: NF21258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21258_high_2
NF21258_high_2
[»] chr5 (13 HSPs)
chr5 (19-417)||(9368094-9368492)
chr5 (47-417)||(9292199-9292557)
chr5 (47-417)||(9301022-9301379)
chr5 (57-417)||(9304649-9304997)
chr5 (47-363)||(9351165-9351472)
chr5 (73-417)||(9374000-9374330)
chr5 (47-363)||(9331437-9331744)
chr5 (139-417)||(9296898-9297164)
chr5 (162-417)||(9349496-9349742)
chr5 (57-261)||(9361438-9361640)
chr5 (162-269)||(9357014-9357121)
chr5 (162-362)||(9287791-9287982)
chr5 (162-269)||(9329391-9329498)
[»] chr6 (1 HSPs)
chr6 (59-201)||(10412657-10412798)
[»] chr8 (3 HSPs)
chr8 (198-269)||(31467352-31467423)
chr8 (197-263)||(31477204-31477270)
chr8 (179-269)||(31502562-31502652)


Alignment Details
Target: chr5 (Bit Score: 387; Significance: 0; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 19 - 417
Target Start/End: Complemental strand, 9368492 - 9368094
Alignment:
Q  19 aaaaatagaagagctgaaatatagagccaaatttgttgtttctatttgattgtatttctatcgaattgtatacatagtatttatatacaaattaactgtg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9368492 aaaaatagaagagctgaaatatagagccaaatttgttgtttctatttgattgtatttctattgaattgtatacatagtatttatatacaaattaactgtg 9368393  T
Q  119 caaaatttttcgatcctgagcagatctctaagatagagtcacaatgttcaaaagacaaactctagttttaaccaaacacctaaatatattctctaaacca 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9368392 caaaatttttcgatcctgagcagatctctaagatagagtcacaatgttcaaaagacaaactctagttttaaccaaacacctaaatatattctctaaacca 9368293  T
Q  219 ttttcaatcatttcaattgcattctccaaagcctcaaatctttcacgtgcatcctttgaaacaattgaaccttctcttgaaagggttctcaaagatgcat 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9368292 ttttcaatcatttcaattgcattctccaaagcctcaaatctttcacgtgcatcctttgaaacaattgaaccttctcttgaaagggttctcaaagatgcat 9368193  T
Q  319 caattgactgcagttcattgaaattctccaacttctcttcacatgagattgtcgttttgtgcatcaattttgccactttaaaccatttggttgcctttg 417  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9368192 caactgactgcaattcattgaaattctccaacttctcttcacatgagattgtcgttttgtgcatcaattttgccactttaaaccatttggttgcctttg 9368094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 47 - 417
Target Start/End: Original strand, 9292199 - 9292557
Alignment:
Q  47 aaatttgttgtttctatttgattgtatttctatcgaattgtatacatagtatttatatacaaattaactgtgcaaaatttttcgatcctgagcagatctc 146  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||||| |||| |||||||||||| ||| ||||||||||||| || || ||||| || |    
T  9292199 aaatctgttgtttctatttgattgtattgctattgaattgtatacatcgtatatatatacaaattgactctgcaaaatttttctatactcagcaggtccc 9292298  T
Q  147 taagatagagtcacaatgttcaaaagacaaactctagttttaaccaaacacctaaatatattctctaaaccattttcaatcatttcaattgcattctcca 246  Q
    ||||||||||| |  |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||| ||  ||||||||||||||||||    
T  9292299 taagatagagttatgatgttcaaaagacagactctagttttaaccaaacgcctaaatatattctctaaacccttttctatactttcaattgcattctcca 9292398  T
Q  247 aagcctcaaatctttcacgtgcatcctttgaaacaattgaaccttctcttgaaagggttctcaaagatgcatcaattgactgcagttcattgaaattctc 346  Q
    ||||||||||||||||| ||||         |||||| ||||| || |||||||||||||| |||||||| || |   |||||| |||||||||||||||    
T  9292399 aagcctcaaatctttcatgtgc---------aacaatagaaccatcacttgaaagggttcttaaagatgcttcgacacactgcaattcattgaaattctc 9292489  T
Q  347 caacttctcttcacatgagattgtcgttttgtgcatcaattttgccactttaaaccatttggttgcctttg 417  Q
    ||  |||||||||||||   ||  | | || |||||||| |||| |||||| |||||||| ||||||||||    
T  9292490 catgttctcttcacatg---ttaccctcttttgcatcaactttgtcactttgaaccattttgttgcctttg 9292557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 47 - 417
Target Start/End: Original strand, 9301022 - 9301379
Alignment:
Q  47 aaatttgttgtttctatttgattgtatttctatcgaattgtatacatagtatttatatacaaattaactgtgcaaaatttttcgatcctgagcagatctc 146  Q
    |||||||||||||||||||| ||||||| |||| ||||| |||||||| |||||||||||| ||| ||||||||||| ||| | ||||| | |||||| |    
T  9301022 aaatttgttgtttctatttgcttgtattactattgaattatatacataatatttatatacagattgactgtgcaaaaattt-caatcctcatcagatccc 9301120  T
Q  147 taagatagagtcacaatgttcaaaagacaaactctagttttaaccaaacacctaaatatattctctaaaccattttcaatcatttcaattgcattctcca 246  Q
    ||||||||||| |  |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  9301121 taagatagagttatgatgttcaaaagacagactctagttttaaccaaacgcctaaatatattctctaaaccattttctatactttcaattgcattctcca 9301220  T
Q  247 aagcctcaaatctttcacgtgcatcctttgaaacaattgaaccttctcttgaaagggttctcaaagatgcatcaattgactgcagttcattgaaattctc 346  Q
    ||||||||||||||||| ||||         |||  | |||||||| |||| |||||||||||||||||| || |   |||||| |||||||||||||||    
T  9301221 aagcctcaaatctttcatgtgc---------aacgttagaaccttcacttgtaagggttctcaaagatgcttccacacactgcaattcattgaaattctc 9301311  T
Q  347 caacttctcttcacatgagattgtcgttttgtgcatcaattttgccactttaaaccatttggttgcctttg 417  Q
    ||  ||||| |||||||   ||  | | || |||||||| |||| |||||| |||||||| ||||||||||    
T  9301312 catgttctcctcacatg---ttaccctcttttgcatcaactttgtcactttcaaccattttgttgcctttg 9301379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 57 - 417
Target Start/End: Original strand, 9304649 - 9304997
Alignment:
Q  57 tttctatttgattgtatttctatcgaattgtatacatagtatttatatacaaattaactgtgcaaaatttttcgatcctgagcagatctctaagatagag 156  Q
    ||||||||||  |||||| ||||  ||||||||||||| |||||||||||| |||  |||||||||| ||||| ||||| | |||||  |||||||||||    
T  9304649 tttctatttgcctgtattactattaaattgtatacataatatttatatacatattgtctgtgcaaaaattttcaatcctcatcagattcctaagatagag 9304748  T
Q  157 tcacaatgttcaaaagacaaactctagttttaaccaaacacctaaatatattctctaaaccattttcaatcatttcaattgcattctccaaagcctcaaa 256  Q
    |||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||  |||||||||||||||| |||||||||||    
T  9304749 tcatgatgttcaaaagacaaactctagttttaaccaaacgcctaaatatattctctaaaccattttctatactttcaattgcattctcgaaagcctcaaa 9304848  T
Q  257 tctttcacgtgcatcctttgaaacaattgaaccttctcttgaaagggttctcaaagatgcatcaattgactgcagttcattgaaattctccaacttctct 356  Q
    ||||||| ||||         |||| | ||| |||| |||||||||||||| |||||||| ||||   |||||| |||||||||||||||||  ||||||    
T  9304849 tctttcatgtgc---------aacattagaatcttcacttgaaagggttcttaaagatgcttcaacacactgcaattcattgaaattctccatgttctct 9304939  T
Q  357 tcacatgagattgtcgttttgtgcatcaattttgccactttaaaccatttggttgcctttg 417  Q
    || ||||   ||  | | || |||||||| ||||| ||||| |||||||||||||||||||    
T  9304940 tcgcatg---ttaccctcttttgcatcaactttgctactttcaaccatttggttgcctttg 9304997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 47 - 363
Target Start/End: Original strand, 9351165 - 9351472
Alignment:
Q  47 aaatttgttgtttctatttgattgtatttctatcgaattgtatacatagtatttatatacaaattaactgtgcaaaatttttcgatcctgagcagatctc 146  Q
    |||| ||||||||||||||| ||||||| |||| |||||||||||||| ||||| |||||| ||| |||||||||||  |||| ||||| | || ||| |    
T  9351165 aaatgtgttgtttctatttgcttgtattactattgaattgtatacataatatttgtatacagattgactgtgcaaaaaatttcaatccttatcaaatccc 9351264  T
Q  147 taagatagagtcacaatgttcaaaagacaaactctagttttaaccaaacacctaaatatattctctaaaccattttcaatcatttcaattgcattctcca 246  Q
    |||||||||||||  |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  9351265 taagatagagtcatgatgttcaaaagacagactctagttttaaccaaacgcctaaatatattctctaaaccattctctatactttcaattgcattctcca 9351364  T
Q  247 aagcctcaaatctttcacgtgcatcctttgaaacaattgaaccttctcttgaaagggttctcaaagatgcatcaattgactgcagttcattgaaattctc 346  Q
    |||||||||||| |||| ||||         |||| |||||||||| |||  ||||||||| |||||||| || |   |||| | |||||||||| ||||    
T  9351365 aagcctcaaatccttcatgtgc---------aacatttgaaccttcacttataagggttcttaaagatgcttccacacactggaattcattgaaactctc 9351455  T
Q  347 caacttctcttcacatg 363  Q
    ||  |||||||||||||    
T  9351456 catgttctcttcacatg 9351472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 73 - 417
Target Start/End: Complemental strand, 9374330 - 9374000
Alignment:
Q  73 tttctatcgaattgtatacatagtatttatatacaaattaactgtgcaaaatttttcgatcctgagcagatctctaagatagagtcacaatgttcaaaag 172  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||| ||||||||||| | ||| | || ||| ||||||||||||||  || ||||||||    
T  9374330 tttctattgaattgtataca--gtatttatatacaaattaactgtacaaaatttttcaagcctcatcaaatccctaagatagagtcatgatattcaaaag 9374233  T
Q  173 acaaactctagttttaaccaaacacctaaatatattctctaaaccattttcaatcatttcaattgcattctccaaagcctcaaatctttcacgtgcatcc 272  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| ||||        
T  9374232 acagactctagttttaaccaaacacctaaatatattctctaaaccattttctatactttcaattgcattctccaaagcctcaaatctttcatgtgc---- 9374137  T
Q  273 tttgaaacaattgaaccttctcttgaaagggttctcaaagatgcatcaattgactgcagttcattgaaattctccaacttctcttcacatgagattgtcg 372  Q
         |||| | |||||||| |||||||||||||| |||||||| ||||   | | || |||||||||||| ||  | |||||||||   |||  |  |     
T  9374136 -----aacattagaaccttcacttgaaagggttcttaaagatgcttcaacacattccaattcattgaaattgtctgagttctcttca---gaggataccc 9374045  T
Q  373 ttttgtgcatcaattttgccactttaaaccatttggttgcctttg 417  Q
    | || |||||||| |||| |||||| |||||||||||||||||||    
T  9374044 tcttatgcatcaactttgtcactttcaaccatttggttgcctttg 9374000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 47 - 363
Target Start/End: Original strand, 9331437 - 9331744
Alignment:
Q  47 aaatttgttgtttctatttgattgtatttctatcgaattgtatacatagtatttatatacaaattaactgtgcaaaatttttcgatcctgagcagatctc 146  Q
    |||| ||| ||||||||||| ||||||| |||| |||||||||||||| ||||| |||||| ||| |||||||||||  |||| ||||| | || ||| |    
T  9331437 aaatgtgtcgtttctatttgcttgtattactattgaattgtatacataatatttgtatacagattgactgtgcaaaaaatttcaatccttatcaaatccc 9331536  T
Q  147 taagatagagtcacaatgttcaaaagacaaactctagttttaaccaaacacctaaatatattctctaaaccattttcaatcatttcaattgcattctcca 246  Q
    |||||||||||||  |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  9331537 taagatagagtcatgatgttcaaaagacagactctagttttaaccaaacgcctaaatatattctctaaaccattctctatactttcaattgcattctcca 9331636  T
Q  247 aagcctcaaatctttcacgtgcatcctttgaaacaattgaaccttctcttgaaagggttctcaaagatgcatcaattgactgcagttcattgaaattctc 346  Q
    |||||||||||| |||| ||||         |||| |||||||||| |||  ||||||||| |||||||| || |   |||| | |||||||||| ||||    
T  9331637 aagcctcaaatccttcatgtgc---------aacatttgaaccttcacttataagggttcttaaagatgcttccacacactggaattcattgaaactctc 9331727  T
Q  347 caacttctcttcacatg 363  Q
    ||  |||||||||||||    
T  9331728 catgttctcttcacatg 9331744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 139 - 417
Target Start/End: Original strand, 9296898 - 9297164
Alignment:
Q  139 cagatctctaagatagagtcacaatgttcaaaagacaaactctagttttaaccaaacacctaaatatattctctaaaccattttcaatcatttcaattgc 238  Q
    |||||| ||||||||||||||  |||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||| ||  ||||||||||    
T  9296898 cagatccctaagatagagtcatgatgttcaaaagacagactctagttttaaccaaatgcctaaatatattctctaaaccattttctatactttcaattgc 9296997  T
Q  239 attctccaaagcctcaaatctttcacgtgcatcctttgaaacaattgaaccttctcttgaaagggttctcaaagatgcatcaattgactgcagttcattg 338  Q
    ||||||||||||||||||||| ||| ||||         |||||| |||||||| |||  ||||||||| || ||||| || |   |||||| |||||||    
T  9296998 attctccaaagcctcaaatctatcatgtgc---------aacaatagaaccttcacttataagggttcttaacgatgcttccacacactgcaattcattg 9297088  T
Q  339 aaattctccaacttctcttcacatgagattgtcgttttgtgcatcaattttgccactttaaaccatttggttgcctttg 417  Q
    |||||||||| | ||||||||||||   ||  | | || |||||||| |||| |||||| |||||||| ||||||||||    
T  9297089 aaattctccatcctctcttcacatg---ttaccctcttttgcatcaactttgtcactttcaaccattttgttgcctttg 9297164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 162 - 417
Target Start/End: Complemental strand, 9349742 - 9349496
Alignment:
Q  162 atgttcaaaagacaaactctagttttaaccaaacacctaaatatattctctaaaccattttcaatcatttcaattgcattctccaaagcctcaaatcttt 261  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||  |||||||||||||||||||||| ||||||||||    
T  9349742 atgttcaaaagacagactctagttttaaccaaacccctaaatatattctctaaaccattttctatactttcaattgcattctccaaagcttcaaatcttt 9349643  T
Q  262 cacgtgcatcctttgaaacaattgaaccttctcttgaaagggttctcaaagatgcatcaattgactgcagttcattgaaattctccaacttctcttcaca 361  Q
    || ||||         |||| | |||||||| |||  |||||||||||||||||| || |   |||||| |||||||||||||||||| |||| ||||||    
T  9349642 catgtgc---------aacattagaaccttcacttataagggttctcaaagatgcttccacacactgcaattcattgaaattctccaaattcttttcaca 9349552  T
Q  362 tgagattgtcgttttgtgcatcaattttgccactttaaaccatttggttgcctttg 417  Q
    ||| | |    | || |||||||| |||| |||||| |||||||| ||||||||||    
T  9349551 tgatactactctcttttgcatcaactttgtcactttcaaccattttgttgcctttg 9349496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 57 - 261
Target Start/End: Complemental strand, 9361640 - 9361438
Alignment:
Q  57 tttctatttgattgtatttctatcgaattgtatacatagtatttatatacaaattaactgtgcaaaatttttcgatcctgagcagatctctaagatagag 156  Q
    |||||||||  ||||||| |||| ||||||||  |||| |||||||||||  ||  ||||||||||||||||| ||||| | || || ||||||||||||    
T  9361640 tttctattttcttgtattgctattgaattgta--cataatatttatatacggatcgactgtgcaaaatttttcaatcctcatcaaatttctaagatagag 9361543  T
Q  157 tcacaatgttcaaaagacaaactctagttttaaccaaacacctaaatatattctctaaaccattttcaatcatttcaattgcattctccaaagcctcaaa 256  Q
    |||  ||||||||||||||||||||||||||||  |||   ||||||| |||||| ||||||||||| | | |||||||||| |||||||||||||||||    
T  9361542 tcatgatgttcaaaagacaaactctagttttaattaaatggctaaatacattctccaaaccattttctagcttttcaattgctttctccaaagcctcaaa 9361443  T
Q  257 tcttt 261  Q
    |||||    
T  9361442 tcttt 9361438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 9357121 - 9357014
Alignment:
Q  162 atgttcaaaagacaaactctagttttaaccaaacacctaaatatattctctaaaccattttcaatcatttcaattgcattctccaaagcctcaaatcttt 261  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||  |||||||||||||||||||||||||||||||||    
T  9357121 atgttcaaaagacagactctagttttaaccaaacacctaaatatattctctaaacccttttctatactttcaattgcattctccaaagcctcaaatcttt 9357022  T
Q  262 cacgtgca 269  Q
    || |||||    
T  9357021 catgtgca 9357014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 162 - 362
Target Start/End: Original strand, 9287791 - 9287982
Alignment:
Q  162 atgttcaaaagacaaactctagttttaaccaaacacctaaatatattctctaaaccattttcaatcatttcaattgcattctccaaagcctcaaatcttt 261  Q
    |||||||||||||  ||||||||||||||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9287791 atgttcaaaagactgactctagttttaaccaaacgcctaaatacattctccaaaccattttctatcatttcaattgcattctccaaagcctcaaatcttt 9287890  T
Q  262 cacgtgcatcctttgaaacaattgaaccttctcttgaaagggttctcaaagatgcatcaattgactgcagttcattgaaattctccaacttctcttcaca 361  Q
    || ||||         |||| | |||||||| |||  ||||||| |||||||||| || |   | |||| |||||||||||||||||  |||||||||||    
T  9287891 catgtgc---------aacattagaaccttcacttataagggttttcaaagatgcttccacacattgcaattcattgaaattctccatgttctcttcaca 9287981  T

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Target: chr5; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 9329498 - 9329391
Alignment:
Q  162 atgttcaaaagacaaactctagttttaaccaaacacctaaatatattctctaaaccattttcaatcatttcaattgcattctccaaagcctcaaatcttt 261  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| ||  |||||| ||||||||||||||||||||||||||    
T  9329498 atgttcaaaagacagactctagttttaaccaaacgcctaaatatattttctaaaccattttctatactttcaactgcattctccaaagcctcaaatcttt 9329399  T
Q  262 cacgtgca 269  Q
    || |||||    
T  9329398 catgtgca 9329391  T

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Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 59 - 201
Target Start/End: Original strand, 10412657 - 10412798
Alignment:
Q  59 tctatttgattgtatttctatcgaattgtatacatagtatttatatacaaattaactgtgcaaaatttttcgatcctgagcagatctctaagatagagtc 158  Q
    |||||||| ||||||| |||| ||||| |||||||| ||||||| |||| ||| | ||| |||| |||||| ||||| | || ||| |||||||||||||    
T  10412657 tctatttgcttgtattactattgaattctatacataatatttatttacagattga-tgtccaaattttttcaatcctcatcaaatccctaagatagagtc 10412755  T
Q  159 acaatgttcaaaagacaaactctagttttaaccaaacacctaa 201  Q
    || || ||||||||||  ||||||||||||||||||| |||||    
T  10412756 acgatattcaaaagaccgactctagttttaaccaaacgcctaa 10412798  T

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Target: chr8 (Bit Score: 44; Significance: 7e-16; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 31467423 - 31467352
Alignment:
Q  198 ctaaatatattctctaaaccattttcaatcatttcaattgcattctccaaagcctcaaatctttcacgtgca 269  Q
    |||||||  |||||||||||||| |||||  ||||||||||||||||||||||||| ||||||||| |||||    
T  31467423 ctaaataagttctctaaaccattctcaatactttcaattgcattctccaaagcctccaatctttcatgtgca 31467352  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 31477270 - 31477204
Alignment:
Q  197 cctaaatatattctctaaaccattttcaatcatttcaattgcattctccaaagcctcaaatctttca 263  Q
    ||||||||  ||||| ||| |||| |||||  ||||||||||||||||||||||||| |||||||||    
T  31477270 cctaaataagttctccaaatcattctcaatactttcaattgcattctccaaagcctctaatctttca 31477204  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 31502652 - 31502562
Alignment:
Q  179 tctagttttaaccaaacacctaaatatattctctaaaccattttcaatcatttcaattgcattctccaaagcctcaaatctttcacgtgca 269  Q
    ||||| ||||| ||| | ||||||||  || || |||||||| |||||  |||||||| | |||||||||||||| ||||||||| |||||    
T  31502652 tctagatttaatcaagcgcctaaataagttttccaaaccattctcaatactttcaattactttctccaaagcctccaatctttcatgtgca 31502562  T

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