View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2125_high_19 (Length: 409)

Name: NF2125_high_19
Description: NF2125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2125_high_19
NF2125_high_19
[»] chr4 (6 HSPs)
chr4 (95-393)||(7054380-7054678)
chr4 (1-97)||(7054242-7054338)
chr4 (3-91)||(16613388-16613476)
chr4 (19-91)||(1702401-1702473)
chr4 (19-91)||(9991053-9991125)
chr4 (334-393)||(14462442-14462501)
[»] chr8 (4 HSPs)
chr8 (95-393)||(8212235-8212533)
chr8 (95-393)||(9290496-9290794)
chr8 (4-97)||(8212575-8212668)
chr8 (1-95)||(9290838-9290932)
[»] chr2 (4 HSPs)
chr2 (98-393)||(38980802-38981097)
chr2 (1-97)||(38981138-38981234)
chr2 (95-227)||(24867259-24867391)
chr2 (18-88)||(24867137-24867207)
[»] scaffold0442 (2 HSPs)
scaffold0442 (95-393)||(12223-12521)
scaffold0442 (1-97)||(12085-12181)
[»] scaffold0320 (2 HSPs)
scaffold0320 (95-393)||(13459-13756)
scaffold0320 (1-97)||(13798-13894)
[»] chr3 (3 HSPs)
chr3 (95-393)||(51424688-51424986)
chr3 (1-97)||(51425028-51425124)
chr3 (338-393)||(11686657-11686712)
[»] chr6 (2 HSPs)
chr6 (99-207)||(24999465-24999573)
chr6 (42-91)||(24999629-24999678)


Alignment Details
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 95 - 393
Target Start/End: Original strand, 7054380 - 7054678
Alignment:
Q  95 ttgattcaaaaaacctagcattcttcaatacatgaatcaaaattgttaaatatagagttcaccatcaaagtgtaagatgtgttcatcatctcaattgaca 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7054380 ttgattcaaaaaacctagcattcttcaatacatgaatcaaaattgttaaatatagagttcaccatcaaagtgtaagatgtgttcatcatctcaattgaca 7054479  T
Q  195 ccacactctcaatgtccacaaaagaaagagaaatatattaaattaaaaggatggaatgaatctctttcattgttggcttactgatggatgtactaggttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||  | |||||    
T  7054480 ccacactctcaatgtccacaaaagaaagagaaatatattaaattaaaaggatggaatgaatctcttttcatgttggcttactgatggatgtgatgggttg 7054579  T
Q  295 tgtgcagctttcctttcgacgttttatagcgtagactcgtcataggtgtaaggtaccctggcggtggagtgtcaagtgtggcatgctttattacattct 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7054580 tgtgcagctttcctttcgacgttttatagcgtagactcgtcataggtgtaaggtaccctggcggcggagtgtcaagtgtggcatgctttattacattct 7054678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 7054242 - 7054338
Alignment:
Q  1 tgtatattcatcctcgtactacttggtcttttcatcccactatgtggctttgtttctatattatttgcaccatctcttggtactttgatctttcttg 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7054242 tgtatattcatcctcgtactacttggtcttttcatcccactatgtggctttgtttctatattgtttgcaccatctcttggtactttgatctttcttg 7054338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 16613388 - 16613476
Alignment:
Q  3 tatattcatcctcgtactacttggtcttttcatcccactatgtggctttgtttctatattatttgcaccatctcttggtactttgatct 91  Q
    |||| |||||| || |||||||||||||||||||| |||| ||||||||||||| |||||  ||||||| |||||||||||||||||||    
T  16613388 tataatcatccccgcactacttggtcttttcatcctactacgtggctttgtttccatattgcttgcaccttctcttggtactttgatct 16613476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 1702401 - 1702473
Alignment:
Q  19 ctacttggtcttttcatcccactatgtggctttgtttctatattatttgcaccatctcttggtactttgatct 91  Q
    |||||||| |||||||||| |||| ||||||||||||| ||||| |||||||| |||||||||||||||||||    
T  1702401 ctacttggccttttcatcctactacgtggctttgtttccatattttttgcaccttctcttggtactttgatct 1702473  T

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Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 9991053 - 9991125
Alignment:
Q  19 ctacttggtcttttcatcccactatgtggctttgtttctatattatttgcaccatctcttggtactttgatct 91  Q
    |||||||| |||||||||| |||| ||||||||||||| ||||| |||||||| |||||||||||||||||||    
T  9991053 ctacttggccttttcatccaactacgtggctttgtttccatattttttgcaccttctcttggtactttgatct 9991125  T

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Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 334 - 393
Target Start/End: Original strand, 14462442 - 14462501
Alignment:
Q  334 tcataggtgtaaggtaccctggcggtggagtgtcaagtgtggcatgctttattacattct 393  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||    
T  14462442 tcataggtgtaaggtaccctggcggcggagtgtcaggtgtggcatgcttgattacattct 14462501  T

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Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 95 - 393
Target Start/End: Complemental strand, 8212533 - 8212235
Alignment:
Q  95 ttgattcaaaaaacctagcattcttcaatacatgaatcaaaattgttaaatatagagttcaccatcaaagtgtaagatgtgttcatcatctcaattgaca 194  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8212533 ttgattcaaaaaacctagcattattcaatacatgaatcaaaattgttaaatatagagttcaccatcaaagtgtaagatgtgttcatcatctcaattgaca 8212434  T
Q  195 ccacactctcaatgtccacaaaagaaagagaaatatattaaattaaaaggatggaatgaatctctttcattgttggcttactgatggatgtactaggttg 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||| | |||||    
T  8212433 ccacactctcaatgtccataaaagaaagagaaatatattaaatttaaaggatggaatgaatctctttccatgttggcttactgatggatgtattgggttg 8212334  T
Q  295 tgtgcagctttcctttcgacgttttatagcgtagactcgtcataggtgtaaggtaccctggcggtggagtgtcaagtgtggcatgctttattacattct 393  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8212333 tgtgcagctttcctttcgatgttttatagcgtagactcgtcataggtgtaaggtaccctggcggtggagtgtcaagtgtggcatgctttattacattct 8212235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 95 - 393
Target Start/End: Complemental strand, 9290794 - 9290496
Alignment:
Q  95 ttgattcaaaaaacctagcattcttcaatacatgaatcaaaattgttaaatatagagttcaccatcaaagtgtaagatgtgttcatcatctcaattgaca 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9290794 ttgattcaaaaaacctagcattcttcaatacatgaatcaaaattgctaaatatagagttcaccatcaaagtgtaatatgtgttcatcatctcaattgaca 9290695  T
Q  195 ccacactctcaatgtccacaaaagaaagagaaatatattaaattaaaaggatggaatgaatctctttcattgttggcttactgatggatgtactaggttg 294  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||    
T  9290694 ccacactctcaatgtccacaaaagaaagagaaatatattaatttaaaaggatggaatgaatctctttccatgttggcttactaatggatgtactgggttg 9290595  T
Q  295 tgtgcagctttcctttcgacgttttatagcgtagactcgtcataggtgtaaggtaccctggcggtggagtgtcaagtgtggcatgctttattacattct 393  Q
    ||||||||||||||||| ||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9290594 tgtgcagctttcctttcaacgttttatagtgtagactcgtcaatggtgtaaggtaccctggcggtggagtgtcaagtgtggcatgccttattacattct 9290496  T

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Target: chr8; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 8212668 - 8212575
Alignment:
Q  4 atattcatcctcgtactacttggtcttttcatcccactatgtggctttgtttctatattatttgcaccatctcttggtactttgatctttcttg 97  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  8212668 atatttatcctcgtactacttggtcttttcatcccactatgtggctttgtttctatattttttgcaccatctcttggtactttgatatttcttg 8212575  T

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Target: chr8; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9290932 - 9290838
Alignment:
Q  1 tgtatattcatcctcgtactacttggtcttttcatcccactatgtggctttgtttctatattatttgcaccatctcttggtactttgatctttct 95  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  9290932 tgtatattcatcctagtactacttgatcttttcatcccactatgtggctttgtttctatattgcttgcaccatctcttggtactttgatctttct 9290838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 264; Significance: 1e-147; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 98 - 393
Target Start/End: Complemental strand, 38981097 - 38980802
Alignment:
Q  98 attcaaaaaacctagcattcttcaatacatgaatcaaaattgttaaatatagagttcaccatcaaagtgtaagatgtgttcatcatctcaattgacacca 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38981097 attcaaaaaacctagcattcttcaatacatgaatcaaaattgttaaatatagagttcaccatcaaagtgtaagatgtgttcatcatctcaattgacacca 38980998  T
Q  198 cactctcaatgtccacaaaagaaagagaaatatattaaattaaaaggatggaatgaatctctttcattgttggcttactgatggatgtactaggttgtgt 297  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| ||||||||    
T  38980997 cactctcaatgtcaacaaaagaaagagaaatatattaaattaaaaggatggaatgaatctctttccacgttggcttactgatggatgtactgggttgtgt 38980898  T
Q  298 gcagctttcctttcgacgttttatagcgtagactcgtcataggtgtaaggtaccctggcggtggagtgtcaagtgtggcatgctttattacattct 393  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38980897 gcagttttcctttcgacattttatagcgtagactcgtcataggtgtaaggtaccctggcggcggagtgtcaagtgtggcatgctttattacattct 38980802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 38981234 - 38981138
Alignment:
Q  1 tgtatattcatcctcgtactacttggtcttttcatcccactatgtggctttgtttctatattatttgcaccatctcttggtactttgatctttcttg 97  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38981234 tgtatattcatcctcgtactacttggtcttttcatcccactatgcggctttgtttctatattgtttgcaccatctcttggtactttgatctttcttg 38981138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 24867259 - 24867391
Alignment:
Q  95 ttgattcaaaaaacctagcattcttcaatacatgaatcaaaattgttaaatatagagttcaccatcaaagtgtaagatgtgttcatcatctcaattgaca 194  Q
    ||||||||| | ||||| | ||||||||||||| ||| ||||| |||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||    
T  24867259 ttgattcaagagacctatcgttcttcaatacataaataaaaatagttaaatataaagttcaccatcaaaatgtaagacgtgttcatcgtctcaattgaca 24867358  T
Q  195 ccacactctcaatgtccacaaaagaaagagaaa 227  Q
    ||||||||||||||| || ||| ||||||||||    
T  24867359 ccacactctcaatgtacataaatgaaagagaaa 24867391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 24867137 - 24867207
Alignment:
Q  18 actacttggtcttttcatcccactatgtggctttgtttctatattatttgcaccatctcttggtactttga 88  Q
    ||||||||| |||||||||||||||| ||||||||||   ||||| |||||||| ||| || || ||||||    
T  24867137 actacttggccttttcatcccactatttggctttgttctcatattgtttgcaccttctttttgttctttga 24867207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 263; Significance: 1e-146; HSPs: 2)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 95 - 393
Target Start/End: Original strand, 12223 - 12521
Alignment:
Q  95 ttgattcaaaaaacctagcattcttcaatacatgaatcaaaattgttaaatatagagttcaccatcaaagtgtaagatgtgttcatcatctcaattgaca 194  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12223 ttgattgaaaaaacctagcattcttcaatacatgaatcaaaattgttaaatatagagttcaccatcagagtgtaagatgtgttcatcatctcaattgaca 12322  T
Q  195 ccacactctcaatgtccacaaaagaaagagaaatatattaaattaaaaggatggaatgaatctctttcattgttggcttactgatggatgtactaggttg 294  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||    
T  12323 ccacactctcaatgtccacaaaagaaagagatatatattaaattaaaaggatggaatgaatctctttacatgttggcttactgatggatgtactgggttg 12422  T
Q  295 tgtgcagctttcctttcgacgttttatagcgtagactcgtcataggtgtaaggtaccctggcggtggagtgtcaagtgtggcatgctttattacattct 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  12423 tgtgcagctttcctttcgacgttttatagcgtagactcgtcataggtgtaaggtaccctggcggctgagtgtcaagtgtggcatgctttattacattct 12521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 12085 - 12181
Alignment:
Q  1 tgtatattcatcctcgtactacttggtcttttcatcccactatgtggctttgtttctatattatttgcaccatctcttggtactttgatctttcttg 97  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12085 tgtatattcatcctcgtactacttggtcttttcatccaactatgtggctttgtttctatattgtttgcaccatctcttggtactttgatctttcttg 12181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 263; Significance: 1e-146; HSPs: 2)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 95 - 393
Target Start/End: Complemental strand, 13756 - 13459
Alignment:
Q  95 ttgattcaaaaaacctagcattcttcaatacatgaatcaaaattgttaaatatagagttcaccatcaaagtgtaagatgtgttcatcatctcaattgaca 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13756 ttgattcaaaaaacctagcattcttcaatacatgaatcaaaattgttaaatataaagttcaccatcaaagtgtaagatgtgttcatcatctcaattgaca 13657  T
Q  195 ccacactctcaatgtccacaaaagaaagagaaatatattaaattaaaaggatggaatgaatctctttcattgttggcttactgatggatgtactaggttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||| |||||    
T  13656 ccacactctcaatgtccacaaaagaaagagaaatatattaaattaaaaggat-gaatgaatctctttccatgttggcttactgatggatgtactgggttg 13558  T
Q  295 tgtgcagctttcctttcgacgttttatagcgtagactcgtcataggtgtaaggtaccctggcggtggagtgtcaagtgtggcatgctttattacattct 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  13557 tgtgcagctttcctttcgacgttttatagcgtagactcgtcataggtgtaaggtaccctggtggcggagtgtcaagtgtggcatgctttattacgttct 13459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 13894 - 13798
Alignment:
Q  1 tgtatattcatcctcgtactacttggtcttttcatcccactatgtggctttgtttctatattatttgcaccatctcttggtactttgatctttcttg 97  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  13894 tgtatattcattctcgtactactaggtcttttcatcccactatgtggctttgtttctatattgtttgcaccatcacttggtactttgatctttcttg 13798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 238; Significance: 1e-131; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 95 - 393
Target Start/End: Complemental strand, 51424986 - 51424688
Alignment:
Q  95 ttgattcaaaaaacctagcattcttcaatacatgaatcaaaattgttaaatatagagttcaccatcaaagtgtaagatgtgttcatcatctcaattgaca 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  51424986 ttgattcaaaaaacctagcattcttcaattcatgaatcaaacttgttaaatatagagttcaccatcaaagtgtaagatgcgttcatcgtctcaattgaca 51424887  T
Q  195 ccacactctcaatgtccacaaaagaaagagaaatatattaaattaaaa-ggatggaatgaatctcttt-cattgttggcttactgatggatgtactaggt 292  Q
    ||||||||||||||||||||||||||| ||||||||  |||||||||| ||||||||||||||||||| |  |||||||||||||||||||||||| |||    
T  51424886 ccacactctcaatgtccacaaaagaaatagaaatat--taaattaaaaaggatggaatgaatctcttttccatgttggcttactgatggatgtactgggt 51424789  T
Q  293 tgtgtgcagctttcctttcgacgttttatagcgtagactcgtcataggtgtaaggtaccctggcggtggagtgtcaagtgtggcatgctttattacattc 392  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51424788 tgtgtgcagctttcctttcgacgttttatagcgtagactcgtcataggtgtaaggtaccctggcggtggagtgtcaagtgtgacatgctttattacattc 51424689  T

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Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 51425124 - 51425028
Alignment:
Q  1 tgtatattcatcctcgtactacttggtcttttcatcccactatgtggctttgtttctatattatttgcaccatctcttggtactttgatctttcttg 97  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  51425124 tgtatattcatccttgtactacttgatcttttcatcccactatgtggctttgtttctatattgtttgcaccatctcttggtactttgatctttcttg 51425028  T

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Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 338 - 393
Target Start/End: Complemental strand, 11686712 - 11686657
Alignment:
Q  338 aggtgtaaggtaccctggcggtggagtgtcaagtgtggcatgctttattacattct 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11686712 aggtgtaaggtaccctggcggtggagtgtcaagtgtggcatgctttattacattct 11686657  T

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Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 24999573 - 24999465
Alignment:
Q  99 ttcaaaaaacctagcattcttcaatacatgaatcaaaattgttaaatatagagttcaccatcaaagtgtaagatgtgttcatcatctcaattgacaccac 198  Q
    ||||| |||||||||| |||||||||||  ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  24999573 ttcaagaaacctagcactcttcaatacagaaatcaaaattgttaaatatagagttcatcgtcaaagtgtaagatgtgttcatcatctcaattgacaccac 24999474  T
Q  199 actctcaat 207  Q
    |||||||||    
T  24999473 actctcaat 24999465  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 24999678 - 24999629
Alignment:
Q  42 atgtggctttgtttctatattatttgcaccatctcttggtactttgatct 91  Q
    |||||||||| |||| ||||| |||||||| |||||||||||||||||||    
T  24999678 atgtggctttatttccatattgtttgcaccttctcttggtactttgatct 24999629  T

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