View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2125_high_34 (Length: 340)
Name: NF2125_high_34
Description: NF2125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2125_high_34 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 10 - 322
Target Start/End: Complemental strand, 36982993 - 36982699
Alignment:
| Q |
10 |
aagaatattaggaaaataagtaagatagaactagtagcgagttatgtacgtagcatgaactcttcagattgaagatgtgtcatgtgtctgacatcgacat |
109 |
Q |
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| T |
36982993 |
aagaatattaggaaaataagtaagatagaactagtagcgagttatgta----gcatgcactcttcagattgaagatgtgtcgtgtgtctgacatcgacat |
36982898 |
T |
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| Q |
110 |
gaatctgacacatgtatttatttcatcagttctattttctaaaattaggac-tgatgtctatgtgctagtgtcggtctcagtgttccatagagacagtgt |
208 |
Q |
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| T |
36982897 |
gaatctgacacatgtatttatttcatcagttctattttctaaaattaggacatgatgtctatgtgctagtgtcg---------------agagacagtgt |
36982813 |
T |
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| Q |
209 |
ctatgatgaactcgaattactgaaagggacacctttcatatacttattcatatgatgaactcaattacgtaagtgtttctaatttttgaaagaacttgtt |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36982812 |
ctatgatgaactcgaattactgaaagggacacctttcatatacttattcatatgatgaactcaattacgtaagtgtttctaatttttgaaagaacttgtt |
36982713 |
T |
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