View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2125_high_72 (Length: 249)
Name: NF2125_high_72
Description: NF2125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2125_high_72 |
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Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 55092047 - 55091808
Alignment:
| Q |
1 |
cacgtttccccttactcgacaccggagaagcatctgcgatctgacttccaccggcgattgaaacatcgcaaccgcaagaagcaggtgattcgagaaggaa |
100 |
Q |
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| T |
55092047 |
cacgtttccccttactcgtcaccggagaagcatctgcgatctgacttccaccggcgattgaaacatcgcaaccgcaagaagcaggtgattcgagaaggaa |
55091948 |
T |
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| Q |
101 |
attaagccaaacagtgagtgatttggctaacgatttaagcgattgttgttttttgatttgttcgattctggaggagtgagattgttcgagttgaaaagct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55091947 |
attaagccaaacagtgagtgatttggctaacgatttaagcgattgttgttgtttgatttgttcgattctggaggagtgagattgttcgagttgaaaagct |
55091848 |
T |
|
| Q |
201 |
ttgagtttctttgaagcagttgaaatggtatgatattctt |
240 |
Q |
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|||||||||||||||||||||||||||||||||| ||||| |
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| T |
55091847 |
ttgagtttctttgaagcagttgaaatggtatgattttctt |
55091808 |
T |
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