View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2125_high_9 (Length: 491)
Name: NF2125_high_9
Description: NF2125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2125_high_9 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 406; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 1 - 491
Target Start/End: Complemental strand, 36983469 - 36982972
Alignment:
| Q |
1 |
gcttttgtggagtgtaaaacatattcattcctatcctatgaaacatgaagtacaggagaatatcaataagattgtggttttgaaaattgtcgtcttccat |
100 |
Q |
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| T |
36983469 |
gcttttgtggagtgtaaaacatcttcattcctatcctatgaatcatgaagtacaggagaatatcaataagattgtggttttgaaaattgtcgtcttccat |
36983370 |
T |
|
| Q |
101 |
catctcaaatgatttcagtattgattggaagaatatcaataaggttgttaacagtacaatttagttttattttaaaacttttcgtgctttaaaaatataa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36983369 |
catctcaaatgatttcagtattgattggaagaatatcaataaggctgttaacagtacaatttagttttattttaaaacttttcgtgctttaaaaatataa |
36983270 |
T |
|
| Q |
201 |
aacatatttgtgactgtttggaacnnnnnnntatatctgtatttaactcnnnnnnntatcaaagaagcacaagagttttacaaaaaattcaactagttgg |
300 |
Q |
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|||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36983269 |
aacatatttgtgactgtttggaacaaaaaaaaaaatctgtatttaactcaaaaaaatatcaaagaagcacaagagttttacaaaaaattcaactagttgg |
36983170 |
T |
|
| Q |
301 |
gcac-------ttgaatttgagaagaccatagtttgcttaagacttgatccttaaattgaacaagtatgtaaatgggagaatcaggaccaaccacttctg |
393 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36983169 |
gcacttcaacattgaatttgagaagaccatagtttgcttaagacttgatccttaaattgaacaagtatgtaaatgggagaatcaggaccaaccacttctg |
36983070 |
T |
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| Q |
394 |
aggtatgtcttaataagcttttgatttattactacttgtcttgaaaggagcaaactgtttgattcctgcattcaacaagaatattaggaaaataagta |
491 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36983069 |
aggtatgtctttataagcttttgatttattactacttgtcttgaaaggagcaaactgtttgattcctgcattcaacaagaatattaggaaaataagta |
36982972 |
T |
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