View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2125_high_90 (Length: 236)
Name: NF2125_high_90
Description: NF2125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2125_high_90 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 41522009 - 41522227
Alignment:
| Q |
3 |
tcttcttcttcttcgagtcacaatgaaggatcatcattgaagggtgaggatgacatgtttttgaacctacctgatctcacacttgatttaagacatagtg |
102 |
Q |
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| T |
41522009 |
tcttcttcttcttcgagtcacaatgaaggatcatcattgaagggtgaggatgacatgtttttgaacctacctgatctcacacttgatttaagacatagtg |
41522108 |
T |
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| Q |
103 |
gtgatgatgggttttattattcctcatcggcttggcttgtaaatggagctcaacatatcgactcgagttttcggcttgaagaccctattctatgggactc |
202 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41522109 |
gtgatgatgggttttattattcctcatcagcttggcttgtaaatggagctcaacatatcgactcgagttttcggcttgaagaccctattctatgggactc |
41522208 |
T |
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| Q |
203 |
ttatccagtcacataattt |
221 |
Q |
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||||| ||||||||||||| |
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| T |
41522209 |
ttatcaagtcacataattt |
41522227 |
T |
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