View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2125_low_25 (Length: 389)
Name: NF2125_low_25
Description: NF2125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2125_low_25 |
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Alignment Details
Target: chr2 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 61 - 370
Target Start/End: Original strand, 11112193 - 11112503
Alignment:
| Q |
61 |
tagtaacttctaaaagccaacaagttgagaagcaaaatcaatataccctcgtccataaaatgaaaatttcacgaaggtagtgacaaacctgatattaaat |
160 |
Q |
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| T |
11112193 |
tagtaacttctaaaaaccaacaagttgagaagcaaaatcaaaataccctaatccataaaatgaaaatttcacgaaggtagtgacaaacctgatattaaat |
11112292 |
T |
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| Q |
161 |
aaccttgtgatggnnnnnnnn---ttgttatacacaactaatagattatttagggctagctggttaaaatagtatagggagggggtcaaatatacacaac |
257 |
Q |
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| T |
11112293 |
aaccttg--atggaaaaaaaaaaattgttatacacaactaatagattatttagggctagctggttaaaatagtatagggagggggtgaaatatacacaac |
11112390 |
T |
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| Q |
258 |
taatataattgtacttgtcttaggagtctatttagaccctctatttcttgctacccggtaattgagtctagttaatacaaatgtttaatattacgataaa |
357 |
Q |
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| T |
11112391 |
taatataattgtacttgtcttaagagtctatttagaccctctatttcttgctacccggtaattgagtctagttaatacaaatgtttaatattacgataaa |
11112490 |
T |
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| Q |
358 |
ttaacaaaagagt |
370 |
Q |
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| T |
11112491 |
ttaacaaaagagt |
11112503 |
T |
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