View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2125_low_30 (Length: 370)

Name: NF2125_low_30
Description: NF2125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2125_low_30
NF2125_low_30
[»] chr8 (60 HSPs)
chr8 (223-352)||(17841645-17841774)
chr8 (223-352)||(26041908-26042037)
chr8 (223-352)||(40779924-40780053)
chr8 (224-356)||(14128996-14129128)
chr8 (223-352)||(3596836-3596965)
chr8 (223-352)||(6108028-6108157)
chr8 (223-352)||(25581034-25581163)
chr8 (223-349)||(42754837-42754963)
chr8 (223-352)||(37985851-37985979)
chr8 (225-352)||(20091598-20091725)
chr8 (223-344)||(32064894-32065016)
chr8 (223-350)||(15187704-15187830)
chr8 (223-352)||(1645759-1645889)
chr8 (225-350)||(34665525-34665649)
chr8 (223-327)||(10044514-10044618)
chr8 (235-351)||(35353183-35353299)
chr8 (223-317)||(1503638-1503732)
chr8 (225-327)||(24211169-24211271)
chr8 (223-352)||(30055657-30055786)
chr8 (248-350)||(8453977-8454078)
chr8 (225-352)||(38017075-38017201)
chr8 (234-349)||(39772608-39772723)
chr8 (235-352)||(32393999-32394114)
chr8 (223-311)||(31347571-31347659)
chr8 (225-344)||(37132477-37132596)
chr8 (223-352)||(7022119-7022249)
chr8 (223-356)||(24844655-24844787)
chr8 (226-315)||(3890412-3890502)
chr8 (254-327)||(41819594-41819667)
chr8 (223-352)||(30834850-30834979)
chr8 (223-313)||(7017653-7017743)
chr8 (227-299)||(32064749-32064822)
chr8 (227-299)||(34665386-34665459)
chr8 (263-349)||(27835288-27835374)
chr8 (227-299)||(17841838-17841911)
chr8 (227-299)||(20091789-20091862)
chr8 (227-299)||(31347770-31347843)
chr8 (227-299)||(40780117-40780190)
chr8 (235-299)||(42755030-42755095)
chr8 (228-299)||(25581227-25581299)
chr8 (226-299)||(24844847-24844920)
chr8 (227-299)||(7017853-7017926)
chr8 (235-299)||(7021990-7022055)
chr8 (227-299)||(8453838-8453911)
chr8 (227-299)||(14128868-14128941)
chr8 (227-299)||(15187564-15187637)
chr8 (227-299)||(26042104-26042177)
chr8 (227-299)||(27782105-27782178)
chr8 (227-299)||(32393862-32393935)
chr8 (227-299)||(35353045-35353118)
chr8 (227-299)||(37986043-37986116)
chr8 (235-299)||(30835035-30835099)
chr8 (235-290)||(38016983-38017039)
chr8 (254-292)||(3890611-3890649)
chr8 (235-299)||(6108221-6108286)
chr8 (227-299)||(27835441-27835514)
chr8 (235-299)||(39772789-39772854)
chr8 (235-285)||(1886621-1886672)
chr8 (227-288)||(37132657-37132719)
chr8 (254-299)||(3817918-3817963)
[»] chr5 (40 HSPs)
chr5 (223-352)||(33584124-33584253)
chr5 (223-352)||(25398379-25398508)
chr5 (223-352)||(3521802-3521930)
chr5 (223-352)||(4892343-4892472)
chr5 (223-352)||(8145515-8145643)
chr5 (223-344)||(6043307-6043427)
chr5 (223-352)||(37321588-37321717)
chr5 (226-352)||(12850942-12851069)
chr5 (223-352)||(38899520-38899650)
chr5 (224-352)||(3362919-3363048)
chr5 (223-352)||(14138809-14138937)
chr5 (223-352)||(2477777-2477906)
chr5 (223-327)||(12614532-12614637)
chr5 (244-352)||(11360947-11361055)
chr5 (223-352)||(22912852-22912978)
chr5 (265-349)||(4433845-4433928)
chr5 (223-313)||(17545477-17545567)
chr5 (240-352)||(27481963-27482077)
chr5 (227-299)||(22913042-22913115)
chr5 (261-344)||(13664709-13664791)
chr5 (254-352)||(31640767-31640864)
chr5 (227-299)||(2477640-2477713)
chr5 (227-299)||(6043499-6043572)
chr5 (235-299)||(8145387-8145452)
chr5 (227-299)||(11361119-11361192)
chr5 (235-294)||(10458409-10458469)
chr5 (227-299)||(3362782-3362855)
chr5 (227-299)||(4433995-4434068)
chr5 (227-299)||(4892206-4892279)
chr5 (227-299)||(12614721-12614794)
chr5 (254-299)||(17545673-17545718)
chr5 (227-299)||(25398242-25398315)
chr5 (227-299)||(38899714-38899787)
chr5 (235-299)||(3521994-3522059)
chr5 (227-299)||(12850805-12850878)
chr5 (227-299)||(33584317-33584390)
chr5 (227-299)||(37321781-37321855)
chr5 (254-299)||(31640928-31640973)
chr5 (225-253)||(12614483-12614511)
chr5 (263-327)||(36880148-36880217)
[»] chr4 (57 HSPs)
chr4 (223-352)||(46441985-46442114)
chr4 (223-352)||(36073491-36073619)
chr4 (223-349)||(44893008-44893134)
chr4 (223-349)||(44893570-44893696)
chr4 (223-352)||(47290207-47290336)
chr4 (223-352)||(53123172-53123301)
chr4 (225-352)||(9089011-9089138)
chr4 (223-352)||(22199401-22199529)
chr4 (223-344)||(31078614-31078735)
chr4 (225-352)||(24128380-24128507)
chr4 (223-352)||(49387682-49387812)
chr4 (223-352)||(50156374-50156502)
chr4 (223-351)||(21802115-21802242)
chr4 (223-352)||(36073088-36073221)
chr4 (223-350)||(2624980-2625107)
chr4 (223-352)||(4751587-4751717)
chr4 (223-352)||(7744907-7745036)
chr4 (1-155)||(31726655-31726820)
chr4 (223-352)||(10442582-10442713)
chr4 (223-327)||(33530479-33530583)
chr4 (233-351)||(23964269-23964388)
chr4 (225-344)||(17655579-17655699)
chr4 (254-352)||(30563350-30563448)
chr4 (223-327)||(37219797-37219902)
chr4 (223-320)||(11314046-11314144)
chr4 (225-313)||(24392854-24392942)
chr4 (223-342)||(37934736-37934855)
chr4 (223-327)||(42671834-42671939)
chr4 (227-299)||(33530676-33530749)
chr4 (223-289)||(25063369-25063436)
chr4 (227-299)||(10442777-10442850)
chr4 (227-299)||(31078807-31078880)
chr4 (227-299)||(49387876-49387949)
chr4 (224-356)||(44744571-44744698)
chr4 (227-299)||(2624841-2624914)
chr4 (227-299)||(7745100-7745173)
chr4 (227-299)||(21802310-21802383)
chr4 (227-299)||(22199265-22199338)
chr4 (227-299)||(24392671-24392744)
chr4 (227-299)||(36072951-36073024)
chr4 (227-299)||(46441848-46441921)
chr4 (227-299)||(47290070-47290143)
chr4 (227-299)||(53123034-53123108)
chr4 (227-299)||(4751450-4751523)
chr4 (227-299)||(24128243-24128316)
chr4 (223-315)||(36073256-36073349)
chr4 (227-299)||(36073354-36073427)
chr4 (227-299)||(44893430-44893503)
chr4 (180-215)||(31726596-31726631)
chr4 (229-299)||(42671675-42671746)
chr4 (253-299)||(17655461-17655507)
chr4 (254-299)||(9088902-9088947)
chr4 (235-299)||(23964453-23964518)
chr4 (227-299)||(50156566-50156639)
chr4 (236-299)||(36073731-36073795)
chr4 (227-299)||(44893201-44893275)
chr4 (227-299)||(37934929-37935002)
[»] chr1 (39 HSPs)
chr1 (223-352)||(51737646-51737775)
chr1 (223-352)||(36966503-36966632)
chr1 (223-352)||(41876237-41876366)
chr1 (223-352)||(6883628-6883757)
chr1 (223-352)||(19015545-19015674)
chr1 (223-344)||(37821629-37821750)
chr1 (224-352)||(40215129-40215257)
chr1 (223-352)||(25463817-25463946)
chr1 (223-352)||(25973550-25973677)
chr1 (223-349)||(20304925-20305052)
chr1 (223-352)||(44094839-44094967)
chr1 (223-352)||(9910086-9910217)
chr1 (223-327)||(18404614-18404718)
chr1 (223-352)||(3559758-3559887)
chr1 (223-352)||(32000061-32000191)
chr1 (223-313)||(33786426-33786516)
chr1 (225-313)||(40273888-40273976)
chr1 (223-299)||(19722894-19722970)
chr1 (225-327)||(44690818-44690921)
chr1 (223-327)||(10167565-10167670)
chr1 (226-299)||(33786623-33786696)
chr1 (223-349)||(22157333-22157459)
chr1 (223-344)||(27523050-27523171)
chr1 (227-299)||(16045786-16045859)
chr1 (227-299)||(40214992-40215065)
chr1 (227-299)||(40273706-40273779)
chr1 (227-299)||(18404446-18404519)
chr1 (227-299)||(25463680-25463753)
chr1 (227-299)||(44094702-44094775)
chr1 (224-295)||(52064373-52064445)
chr1 (261-327)||(52329441-52329507)
chr1 (227-299)||(6883491-6883564)
chr1 (227-299)||(9910281-9910354)
chr1 (227-299)||(19015408-19015481)
chr1 (227-299)||(32000255-32000328)
chr1 (227-299)||(36966696-36966769)
chr1 (227-299)||(37821822-37821895)
chr1 (227-299)||(3559621-3559694)
chr1 (227-295)||(41876434-41876503)
[»] scaffold0228 (6 HSPs)
scaffold0228 (223-349)||(26080-26206)
scaffold0228 (223-349)||(16128-16254)
scaffold0228 (290-349)||(8546-8605)
scaffold0228 (235-299)||(8414-8479)
scaffold0228 (235-299)||(15996-16061)
scaffold0228 (235-299)||(25948-26013)
[»] chr2 (37 HSPs)
chr2 (223-352)||(23267857-23267986)
chr2 (223-352)||(33380348-33380477)
chr2 (223-356)||(10662024-10662158)
chr2 (223-352)||(35160898-35161029)
chr2 (223-352)||(7475303-7475432)
chr2 (223-352)||(9293370-9293500)
chr2 (227-352)||(3989217-3989342)
chr2 (223-350)||(13354990-13355118)
chr2 (226-352)||(31174633-31174758)
chr2 (223-352)||(43331053-43331182)
chr2 (264-352)||(21936223-21936311)
chr2 (223-327)||(22592876-22592983)
chr2 (223-352)||(9723546-9723677)
chr2 (225-313)||(21393483-21393570)
chr2 (254-327)||(16767288-16767361)
chr2 (223-313)||(34320963-34321042)
chr2 (227-299)||(14941354-14941427)
chr2 (227-299)||(9293564-9293637)
chr2 (227-299)||(10661891-10661964)
chr2 (263-351)||(14941199-14941290)
chr2 (227-299)||(21936085-21936158)
chr2 (227-299)||(23268050-23268123)
chr2 (235-299)||(31174822-31174887)
chr2 (227-299)||(35160761-35160834)
chr2 (223-268)||(39819272-39819317)
chr2 (223-352)||(40262531-40262660)
chr2 (227-299)||(43330916-43330989)
chr2 (244-313)||(37335824-37335894)
chr2 (227-299)||(7475496-7475569)
chr2 (235-299)||(13354858-13354923)
chr2 (227-299)||(21393676-21393749)
chr2 (235-299)||(27847644-27847709)
chr2 (227-299)||(33380211-33380284)
chr2 (253-298)||(37335744-37335789)
chr2 (254-299)||(3989108-3989153)
chr2 (227-299)||(9723409-9723482)
chr2 (235-287)||(22591494-22591547)
[»] chr3 (46 HSPs)
chr3 (223-349)||(34482683-34482809)
chr3 (223-344)||(3137209-3137330)
chr3 (223-356)||(37216848-37216981)
chr3 (223-352)||(37522194-37522323)
chr3 (223-352)||(22426140-22426268)
chr3 (223-352)||(33113934-33114064)
chr3 (223-352)||(3456205-3456334)
chr3 (223-352)||(3574321-3574450)
chr3 (223-352)||(19650695-19650823)
chr3 (223-352)||(30385542-30385670)
chr3 (224-344)||(8320378-8320499)
chr3 (223-327)||(3089585-3089689)
chr3 (223-327)||(6042043-6042147)
chr3 (225-351)||(33145854-33145980)
chr3 (223-352)||(48161046-48161176)
chr3 (223-327)||(2754885-2754989)
chr3 (223-327)||(47738277-47738382)
chr3 (223-351)||(26612891-26613017)
chr3 (225-345)||(42921273-42921394)
chr3 (223-349)||(36864827-36864952)
chr3 (223-327)||(40327997-40328102)
chr3 (223-352)||(41224374-41224504)
chr3 (223-313)||(8361834-8361924)
chr3 (223-352)||(9796824-9796953)
chr3 (235-327)||(33839701-33839794)
chr3 (224-326)||(46919061-46919164)
chr3 (223-352)||(24343688-24343820)
chr3 (223-352)||(42298005-42298122)
chr3 (238-352)||(41883031-41883147)
chr3 (227-299)||(2754721-2754794)
chr3 (227-299)||(3137402-3137475)
chr3 (227-299)||(3574515-3574588)
chr3 (227-299)||(6041888-6041961)
chr3 (235-299)||(9797017-9797082)
chr3 (227-299)||(33145717-33145789)
chr3 (286-352)||(11347409-11347476)
chr3 (254-299)||(8362033-8362078)
chr3 (227-299)||(11347272-11347345)
chr3 (227-299)||(37217041-37217114)
chr3 (235-299)||(47738117-47738182)
chr3 (235-299)||(19650888-19650953)
chr3 (227-299)||(30385015-30385088)
chr3 (227-299)||(34482898-34482971)
chr3 (254-299)||(41883211-41883256)
chr3 (235-299)||(22426332-22426397)
chr3 (235-299)||(26612797-26612862)
[»] chr7 (37 HSPs)
chr7 (223-352)||(48880722-48880851)
chr7 (223-344)||(30848718-30848839)
chr7 (223-344)||(35445546-35445667)
chr7 (223-352)||(3962120-3962248)
chr7 (223-352)||(24395113-24395241)
chr7 (223-352)||(42611952-42612081)
chr7 (223-352)||(45637853-45637981)
chr7 (225-351)||(4974532-4974658)
chr7 (223-344)||(25167651-25167766)
chr7 (223-327)||(15329440-15329544)
chr7 (223-327)||(34483004-34483108)
chr7 (223-327)||(15577642-15577746)
chr7 (223-327)||(35876410-35876514)
chr7 (223-352)||(42696224-42696354)
chr7 (224-352)||(37476876-37477004)
chr7 (232-324)||(29737313-29737406)
chr7 (223-352)||(18037119-18037247)
chr7 (223-313)||(15238564-15238654)
chr7 (225-344)||(20009895-20010014)
chr7 (227-299)||(4974723-4974796)
chr7 (227-299)||(42611815-42611888)
chr7 (227-299)||(45637716-45637789)
chr7 (227-296)||(15577841-15577911)
chr7 (227-299)||(15329277-15329350)
chr7 (227-299)||(34482839-34482912)
chr7 (227-299)||(48880915-48880988)
chr7 (223-352)||(36790271-36790390)
chr7 (254-299)||(15238414-15238459)
chr7 (227-299)||(24394976-24395049)
chr7 (227-299)||(35444562-35444635)
chr7 (227-288)||(37477079-37477141)
chr7 (223-289)||(40880641-40880706)
chr7 (227-299)||(3961983-3962056)
chr7 (235-299)||(18036990-18037055)
chr7 (227-299)||(25167838-25167911)
chr7 (227-299)||(29737143-29737216)
chr7 (227-299)||(36790454-36790527)
[»] scaffold0204 (2 HSPs)
scaffold0204 (223-352)||(4537-4666)
scaffold0204 (227-299)||(4400-4473)
[»] chr6 (36 HSPs)
chr6 (223-352)||(17175816-17175945)
chr6 (223-352)||(32702346-32702475)
chr6 (223-352)||(33696837-33696967)
chr6 (223-344)||(18365369-18365489)
chr6 (223-344)||(18370633-18370753)
chr6 (223-352)||(33695121-33695251)
chr6 (223-344)||(2309218-2309339)
chr6 (223-352)||(28675289-28675418)
chr6 (223-333)||(23290876-23290986)
chr6 (225-352)||(6031537-6031665)
chr6 (223-327)||(17705264-17705367)
chr6 (261-352)||(18889477-18889567)
chr6 (225-344)||(11548386-11548505)
chr6 (264-352)||(6127417-6127506)
chr6 (223-327)||(29693611-29693716)
chr6 (227-299)||(33695315-33695388)
chr6 (227-299)||(33696700-33696773)
chr6 (224-289)||(34238883-34238948)
chr6 (223-301)||(582522-582602)
chr6 (297-352)||(25987071-25987126)
chr6 (227-299)||(6127279-6127352)
chr6 (227-299)||(23291072-23291145)
chr6 (229-299)||(11548576-11548647)
chr6 (227-289)||(25986934-25986997)
chr6 (291-344)||(9752109-9752161)
chr6 (227-299)||(17176009-17176082)
chr6 (227-299)||(17705453-17705526)
chr6 (227-299)||(18365561-18365634)
chr6 (227-299)||(18370825-18370898)
chr6 (227-299)||(28675152-28675225)
chr6 (268-352)||(8515567-8515650)
chr6 (227-299)||(18889685-18889757)
chr6 (223-277)||(2121004-2121059)
chr6 (254-299)||(9752233-9752278)
chr6 (227-289)||(8515723-8515786)
chr6 (235-299)||(32702217-32702282)
[»] scaffold0178 (2 HSPs)
scaffold0178 (223-352)||(11762-11891)
scaffold0178 (227-299)||(11625-11698)
[»] scaffold0471 (2 HSPs)
scaffold0471 (225-352)||(12983-13110)
scaffold0471 (227-299)||(12846-12919)
[»] scaffold0096 (2 HSPs)
scaffold0096 (223-352)||(41152-41280)
scaffold0096 (227-299)||(41015-41088)
[»] scaffold0085 (2 HSPs)
scaffold0085 (223-352)||(47991-48119)
scaffold0085 (227-299)||(47854-47927)
[»] scaffold0665 (2 HSPs)
scaffold0665 (304-356)||(3200-3252)
scaffold0665 (227-299)||(3072-3145)
[»] scaffold0041 (1 HSPs)
scaffold0041 (223-289)||(85577-85642)


Alignment Details
Target: chr8 (Bit Score: 122; Significance: 2e-62; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 17841645 - 17841774
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17841645 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 17841744  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  17841745 taaaaaaaagatacataacacccaccaccc 17841774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 26041908 - 26042037
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26041908 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 26042007  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  26042008 taaaaaaaagatacataacacccaccaccc 26042037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 40779924 - 40780053
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40779924 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 40780023  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||| | |||||||    
T  40780024 taaaaaaaagatacataacatccaccaccc 40780053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 224 - 356
Target Start/End: Complemental strand, 14129128 - 14128996
Alignment:
Q  224 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 323  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14129128 gaaaatgctagatatcaagaatgattttataagaaatattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 14129029  T
Q  324 aaaagaaagatacataacaccgaccaccctatg 356  Q
    |||| ||| |||||||||||| |||||||||||    
T  14129028 aaaaaaaaaatacataacacccaccaccctatg 14128996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 3596836 - 3596965
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3596836 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatttattaatctttca 3596935  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  3596936 taaaaaaaagatacataacacccaccaccc 3596965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 6108028 - 6108157
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6108028 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 6108127  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    |||||  ||||||||||||||| |||||||    
T  6108128 taaaaagaagatacataacacccaccaccc 6108157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 25581034 - 25581163
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  25581034 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacataacacaataatcacctttagatttcagtctcatttattaatctttca 25581133  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  25581134 taaaaaaaagatacataacacccaccaccc 25581163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 223 - 349
Target Start/End: Original strand, 42754837 - 42754963
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42754837 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttca 42754936  T
Q  323 taaaagaaagatacataacaccgacca 349  Q
    ||||| ||| |||||||||||| ||||    
T  42754937 taaaaaaaaaatacataacacccacca 42754963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 37985851 - 37985979
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37985851 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcccatttattaatctttca 37985950  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||||| |||||||    
T  37985951 taaaa-aaaaatacataacacccaccaccc 37985979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 225 - 352
Target Start/End: Original strand, 20091598 - 20091725
Alignment:
Q  225 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 324  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  20091598 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcata 20091697  T
Q  325 aaagaaagatacataacaccgaccaccc 352  Q
    ||| ||| |||||||||||| |||||||    
T  20091698 aaaaaaaaatacataacacccaccaccc 20091725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 32065016 - 32064894
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32065016 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 32064917  T
Q  323 t-aaaagaaagatacataacacc 344  Q
    | |||| ||||||||||||||||    
T  32064916 taaaaaaaaagatacataacacc 32064894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 15187830 - 15187704
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15187830 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttca 15187731  T
Q  323 taaaagaaagatacataacaccgaccac 350  Q
    ||||| ||| |||||||||||| |||||    
T  15187730 taaaa-aaaaatacataacacccaccac 15187704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 1645759 - 1645889
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1645759 ggaaaatgctagatatcaagaatgattttataagaaagaaccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 1645858  T
Q  323 t-aaaagaaagatacataacaccgaccaccc 352  Q
    | |||| ||| |||||||||||| |||||||    
T  1645859 taaaaaaaaaaatacataacacccaccaccc 1645889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 225 - 350
Target Start/End: Complemental strand, 34665649 - 34665525
Alignment:
Q  225 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 324  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  34665649 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcata 34665550  T
Q  325 aaagaaagatacataacaccgaccac 350  Q
    ||| ||| |||||||||||| |||||    
T  34665549 aaa-aaaaatacataacacccaccac 34665525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 10044618 - 10044514
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10044618 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttca 10044519  T
Q  323 taaaa 327  Q
    |||||    
T  10044518 taaaa 10044514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 235 - 351
Target Start/End: Complemental strand, 35353299 - 35353183
Alignment:
Q  235 atatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||| ||||||    
T  35353299 atatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttaaattttaatctcatttattaatctttcataaaaaaaagat 35353200  T
Q  335 acataacaccgaccacc 351  Q
    |||||||||| ||||||    
T  35353199 acataacacccaccacc 35353183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 223 - 317
Target Start/End: Original strand, 1503638 - 1503732
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatc 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1503638 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatc 1503732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 225 - 327
Target Start/End: Original strand, 24211169 - 24211271
Alignment:
Q  225 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 324  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24211169 aaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 24211268  T
Q  325 aaa 327  Q
    |||    
T  24211269 aaa 24211271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 30055786 - 30055657
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| ||||||    
T  30055786 ggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagattttagtctcatttattaacctttca 30055687  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||| | |||||||    
T  30055686 taaaaaaaaaatacataacatccaccaccc 30055657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 248 - 350
Target Start/End: Complemental strand, 8454078 - 8453977
Alignment:
Q  248 ttttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgac 347  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  8454078 ttttataagaagaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaa-aaagatacataacacccac 8453980  T
Q  348 cac 350  Q
    |||    
T  8453979 cac 8453977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 225 - 352
Target Start/End: Complemental strand, 38017201 - 38017075
Alignment:
Q  225 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataa-tcacctttagatttcagtctcatttattaatctttcat 323  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||      
T  38017201 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatttacctttagatttcagtctcatttattaatctttc-- 38017104  T
Q  324 aaaagaaagatacataacaccgaccaccc 352  Q
    |||| ||| |||||||||||| |||||||    
T  38017103 aaaaaaaaaatacataacacccaccaccc 38017075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 234 - 349
Target Start/End: Original strand, 39772608 - 39772723
Alignment:
Q  234 gatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaaga 333  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||| ||| |    
T  39772608 gatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtttcgtttattaatctttcataaaaaaaaaa 39772707  T
Q  334 tacataacaccgacca 349  Q
    ||||||||||| ||||    
T  39772708 tacataacacccacca 39772723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 235 - 352
Target Start/End: Complemental strand, 32394114 - 32393999
Alignment:
Q  235 atatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagat 334  Q
    ||||||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  32394114 atatcaagaatgattttataaaaaatatttaagaatgacatg-cacaataatcacctttagatttcagtctcatttattaatctttcataaaa-aaaaat 32394017  T
Q  335 acataacaccgaccaccc 352  Q
    |||||||||| |||||||    
T  32394016 acataacacctaccaccc 32393999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 31347571 - 31347659
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcattta 311  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31347571 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcattta 31347659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 37132477 - 37132596
Alignment:
Q  225 aaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 323  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||||||| |||||||||||||| ||||||||| ||||||     
T  37132477 aaaatgctagatatcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttca- 37132575  T
Q  324 aaaagaaagatacataacacc 344  Q
    |||| ||| | ||||||||||    
T  37132576 aaaaaaaaaaaacataacacc 37132596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 7022249 - 7022119
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||| ||||||||   |||||| |||||||||||||| | |||||||||| || ||||||||||||||||||||||   ||||||    
T  7022249 ggaaaatgctagatatcaacaatgatttatcaagaaagattcaagaatgacaagtcacaataatcgcccttagatttcagtctcatttatt--cctttca 7022152  T
Q  323 t---aaaagaaagatacataacaccgaccaccc 352  Q
    |   |||| ||| |||||||||||| |||||||    
T  7022151 taaaaaaaaaaaaatacataacacccaccaccc 7022119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 223 - 356
Target Start/End: Original strand, 24844655 - 24844787
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    |||||||| |||||||||| ||||||||||| |||||| ||| ||||||| ||||||| |||||||||  |||||||| | ||| | ||||||| |||||    
T  24844655 ggaaaatgttagatatcaataatgattttatcaagaaagatttaagaatggcatggcaaaataatcactcttagattttaatcttaattattaacctttc 24844754  T
Q  322 ataaaagaaagatacataacaccgaccaccctatg 356  Q
    |||||  ||| |||||||||||| |||||||||||    
T  24844755 ataaa--aaaaatacataacacccaccaccctatg 24844787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 226 - 315
Target Start/End: Original strand, 3890412 - 3890502
Alignment:
Q  226 aaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 315  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||| |||||||||| |||||||| | ||| |||||||||    
T  3890412 aaatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatcaccattagattttaatcttatttattaa 3890502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 41819594 - 41819667
Alignment:
Q  254 aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaa 327  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||    
T  41819594 aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacctatcataaaa 41819667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 30834850 - 30834979
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    |||||||| |||||||||||||||||||||| |||||| ||| |||||||||||| || ||||| |||| |||||||||||| | |||| | ||  |||     
T  30834850 ggaaaatgatagatatcaagaatgattttatcaagaaagattaaagaatgacatgacagaataaccacccttagatttcagtgttatttttcaacttttg 30834949  T
Q  322 ataaaagaaagatacataacaccgaccaccc 352  Q
    |||||| ||| |||||||||||| |||||||    
T  30834950 ataaaataaa-atacataacacccaccaccc 30834979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 7017653 - 7017743
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 313  Q
    ||||||||||||||||||||||||||||   |||||| ||| |||||||||||   | |||||||| | ||||||||||||||||||||||    
T  7017653 ggaaaatgctagatatcaagaatgatttatcaagaaatatttaagaatgacattttataataatcatccttagatttcagtctcatttatt 7017743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 32064749 - 32064822
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  32064749 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 32064822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 34665386 - 34665459
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  34665386 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 34665459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 27835288 - 27835374
Alignment:
Q  263 tcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgacca 349  Q
    |||| ||||| ||| ||||||||||| | |||||||||| ||||||||||||| |||| |||||| ||| |||||||||||| ||||    
T  27835288 tcaaaaatgatatgacacaataatcatccttagatttcaatctcatttattaaccttttataaaacaaaaatacataacacccacca 27835374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 17841911 - 17841838
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  17841911 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 17841838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 20091862 - 20091789
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| ||||||||||  ||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  20091862 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 20091789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 31347843 - 31347770
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| ||||||||||  ||||| | |||||||||||||||||||||||||| |||||||||| ||||||||    
T  31347843 aatgctatatatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 31347770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 40780190 - 40780117
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  40780190 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 40780117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 42755095 - 42755030
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  42755095 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 42755030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 299
Target Start/End: Complemental strand, 25581299 - 25581227
Alignment:
Q  228 atgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||| |||||||||| | |||||  ||||||| |||||||||||||||||| |||||||||||||||||||    
T  25581299 atgctatatatcaagaaagtttttacgaagaaaatttcaagaatgacatggcaaaataatcacctttagattt 25581227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 299
Target Start/End: Complemental strand, 24844920 - 24844847
Alignment:
Q  226 aaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||||| ||||||||    
T  24844920 aaatgctacatatcaagaaatattttattaagaaaaattcaagaatgacatgaca-aataatcacccttagattt 24844847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 7017926 - 7017853
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||| ||| |||||| | |||||||||||||||||||||||||| |||||||| | ||||||||    
T  7017926 aatgctatatatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatcatccttagattt 7017853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 7021990 - 7022055
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||| |||||| | ||||||||||||||||||| |||||| |||||||||| ||||||||    
T  7021990 atatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatcacccttagattt 7022055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 8453838 - 8453911
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  8453838 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatcacccttagattt 8453911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 14128868 - 14128941
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| || |||| || ||||||||||||||| |||||||||| ||||||||    
T  14128868 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattt 14128941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 15187564 - 15187637
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||| ||| ||||||||    
T  15187564 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattt 15187637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 26042177 - 26042104
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||| ||||| |||||||| ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  26042177 aatgctatatattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 26042104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 27782178 - 27782105
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| ||||||||||  ||||||| |||||| |||||| |||||||||||| |||||||||| ||||||||    
T  27782178 aatgctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatcacccttagattt 27782105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 32393862 - 32393935
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||| ||||    
T  32393862 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 32393935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 35353045 - 35353118
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  35353045 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 35353118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 37986116 - 37986043
Alignment:
Q  227 aatgctagatatcaagaatgattttataagaaaaattc-aagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| | |||||||  ||||||||||||||| |||||||||| ||||||||    
T  37986116 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattt 37986043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 30835099 - 30835035
Alignment:
Q  235 atatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||| ||||||||   ||||||||||||||||||||||| |||||||||| || |||||    
T  30835099 atatcaagaaagattttatcgaaaaaattcaagaatgacatggcagaataatcaccctttgattt 30835035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 38016983 - 38017039
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacc 290  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| ||||||||||    
T  38016983 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacc 38017039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 3890649 - 3890611
Alignment:
Q  254 aagaaaaattcaagaatgacatggcacaataatcacctt 292  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  3890649 aagaaaaattcaagaatgacatggcagaataatcacctt 3890611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 6108286 - 6108221
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  6108286 atatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcacccttagattt 6108221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 27835514 - 27835441
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| ||||||| || ||| |||| |||||||||||||||||||||||| | |||||||| | ||||||||    
T  27835514 aatgctatatatcaataaagatcttattaagaaaaattcaagaatgacatggtaaaataatcatccttagattt 27835441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 39772854 - 39772789
Alignment:
Q  235 atatcaagaatgattttataagaaaaatt-caagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||||||  ||||||| | ||||||| |||||||||||||||| |||||||||| ||||||||    
T  39772854 atatcaagaaatattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 39772789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 1886672 - 1886621
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataa 285  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||||| |||||    
T  1886672 atatcaagaatgattttatcaagaaagattcaagaatgacgtggcagaataa 1886621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 37132719 - 37132657
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatca 288  Q
    ||||||| ||||||| ||  ||||||| |||||||||| ||||||||||||||| ||||||||    
T  37132719 aatgctatatatcaaaaaatattttatcaagaaaaatttaagaatgacatggcagaataatca 37132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 3817963 - 3817918
Alignment:
Q  254 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||||||||||||| ||||| || |||||||||| ||||||||    
T  3817963 aagaaaaattcaagaattacatgacagaataatcacccttagattt 3817918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 2e-62; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 33584124 - 33584253
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33584124 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 33584223  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  33584224 taaaaaaaagatacataacacccaccaccc 33584253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 25398508 - 25398379
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25398508 ggaaaatgctagatatcaagaatgattttataagaaaaattcaacaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 25398409  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  25398408 taaaaaaaagatacataacacccaccaccc 25398379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 3521802 - 3521930
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3521802 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 3521901  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  3521902 taaaa-aaagatacataacacccaccaccc 3521930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 4892472 - 4892343
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4892472 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 4892373  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    | |||  ||||||||||||||| |||||||    
T  4892372 ttaaaagaagatacataacacccaccaccc 4892343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 8145643 - 8145515
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8145643 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 8145544  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||||| |||||||    
T  8145543 taaaa-aaaaatacataacacccaccaccc 8145515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 6043307 - 6043427
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6043307 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 6043406  T
Q  323 taaaagaaagatacataacacc 344  Q
    ||||| ||| ||||||||||||    
T  6043407 taaaa-aaaaatacataacacc 6043427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 37321588 - 37321717
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37321588 ggaaaatgctagatatcaagaatgattttataagaaatattcaagaatgaaatggcacaataatcacctttagatttcagtctcatttattaatctttca 37321687  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||  ||| |||||||||||| |||||||    
T  37321688 taaataaaaaatacataacacccaccaccc 37321717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 226 - 352
Target Start/End: Complemental strand, 12851069 - 12850942
Alignment:
Q  226 aaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataa 325  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12851069 aaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcataa 12850970  T
Q  326 aaga-aagatacataacaccgaccaccc 352  Q
    || | || |||||||||||| |||||||    
T  12850969 aaaagaaaatacataacacccaccaccc 12850942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 38899520 - 38899650
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38899520 ggaaaatgctagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttc 38899619  T
Q  322 ataaaagaaagatacataacaccgaccaccc 352  Q
    |||||| ||||||| |||||||| |||||||    
T  38899620 ataaaaaaaagatatataacacccaccaccc 38899650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 224 - 352
Target Start/End: Complemental strand, 3363048 - 3362919
Alignment:
Q  224 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 323  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  3363048 gaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataaccacctttagatttcagtctcatttattaatctttcat 3362949  T
Q  324 -aaaagaaagatacataacaccgaccaccc 352  Q
     |||| |||||||||||||||| |||||||    
T  3362948 aaaaaaaaagatacataacacccaccaccc 3362919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 14138937 - 14138809
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14138937 ggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttca 14138838  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||||| |||||||    
T  14138837 taaaa-aaaaatacataacacccaccaccc 14138809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 2477906 - 2477777
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  2477906 ggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaatgatcacctttagatttcagtcttatttattaatctttca 2477807  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||||| |||||||    
T  2477806 taaaaaaaaaatacataacacccaccaccc 2477777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 223 - 327
Target Start/End: Original strand, 12614532 - 12614637
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    |||||||||||||||||||| |||||||||| | |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12614532 ggaaaatgctagatatcaagtatgattttatcaaaaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttc 12614631  T
Q  322 ataaaa 327  Q
    ||||||    
T  12614632 ataaaa 12614637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 244 - 352
Target Start/End: Original strand, 11360947 - 11361055
Alignment:
Q  244 atgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacac 343  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||| || ||| |||||||||||    
T  11360947 atgattttataagaaagattcaagaatgacatggcacaataatcatctttagatttcaatctaatttattaatctttcatacaaaaaaaatacataacac 11361046  T
Q  344 cgaccaccc 352  Q
    | |||||||    
T  11361047 ccaccaccc 11361055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 22912852 - 22912978
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||| |||    
T  22912852 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt--tctctca 22912949  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||| | |||||||    
T  22912950 taaaa-aaaaatacataacatccaccaccc 22912978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 4433845 - 4433928
Alignment:
Q  265 aagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgacca 349  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||| ||||    
T  4433845 aagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttcataaaa-aaaaatacataacacccacca 4433928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 17545477 - 17545567
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 313  Q
    ||||||||||||||||||||||||||||   || ||| ||| |||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  17545477 ggaaaatgctagatatcaagaatgatttatcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatttatt 17545567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 240 - 352
Target Start/End: Complemental strand, 27482077 - 27481963
Alignment:
Q  240 aagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttaga-tttcagtctcatttattaatctttcataaaagaaagataca 337  Q
    |||||||||||||| | |||| |||||||||||||||  || |||||||||||||||| ||| | ||| ||||||||| |||| |||||| ||| |||||    
T  27482077 aagaatgattttatcaaaaaagattcaagaatgacataacagaataatcacctttagatttttaatcttatttattaaccttttataaaaaaaaaataca 27481978  T
Q  338 taacaccgaccaccc 352  Q
    ||||||| |||||||    
T  27481977 taacacccaccaccc 27481963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 22913115 - 22913042
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | |||||||||||||||||||||||||| |||||||||| ||||||||    
T  22913115 aatgctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 22913042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 344
Target Start/End: Complemental strand, 13664791 - 13664709
Alignment:
Q  261 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacacc 344  Q
    ||||||||||||||||  | |||||||||| |||||||||||||| |||||||||| ||| |||||| ||| ||||||||||||    
T  13664791 attcaagaatgacatgatagaataatcacccttagatttcagtcttatttattaatgttttataaaa-aaaaatacataacacc 13664709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 31640767 - 31640864
Alignment:
Q  254 aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgaccaccc 352  Q
    |||||| ||||||||||||||||||| |||||||  |||||||||    ||| ||||||||| ||||||||||| ||| |||||||||||| |||||||    
T  31640767 aagaaagattcaagaatgacatggcagaataatcgactttagattgatatcttatttattaacctttcataaaa-aaaaatacataacacccaccaccc 31640864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 2477640 - 2477713
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  2477640 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 2477713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 6043572 - 6043499
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||| | |||||||||| ||||||||    
T  6043572 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatcacccttagattt 6043499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 8145387 - 8145452
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  8145387 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 8145452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 11361192 - 11361119
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  11361192 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 11361119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 10458409 - 10458469
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcaccttta 294  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatcaccttta 10458469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 3362782 - 3362855
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| | |||||||||||||||| ||||| |||| ||||||||    
T  3362782 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 3362855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 4434068 - 4433995
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  4434068 aatgctatatatcaagaaagatttttttaagaaaatttcaagaatgatatggcagaataatcacccttagattt 4433995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 4892206 - 4892279
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  4892206 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 4892279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 12614794 - 12614721
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||||| ||||||||    
T  12614794 aatgctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatcacccttagattt 12614721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 17545718 - 17545673
Alignment:
Q  254 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  17545718 aagaaaaattcaagaatgacatggcagaataatcaccattagattt 17545673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 25398242 - 25398315
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  25398242 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 25398315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 38899787 - 38899714
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| | |||||||||||||||| ||||| |||| ||||||||    
T  38899787 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 38899714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 3522059 - 3521994
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||| |||||| | ||||||| ||||| |||||||||||| |||||||||| ||||||||    
T  3522059 atatcaagaaagattttttcaagaaaatttcaaaaatgacatggcagaataatcaccattagattt 3521994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 12850805 - 12850878
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| | ||| |||||||||||| ||||| |||| ||||||||    
T  12850805 aatgctatatatcaagaaagattttatcaagaaaattccaaaaatgacatggcagaataaccacccttagattt 12850878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 33584390 - 33584317
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||| ||||    
T  33584390 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 33584317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 37321855 - 37321781
Alignment:
Q  227 aatgctagatatc-aagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| ||||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||| ||||    
T  37321855 aatgctatatatctaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 37321781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 31640973 - 31640928
Alignment:
Q  254 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||| ||||||||||||||||||| ||||| |||| ||||||||    
T  31640973 aagaaagattcaagaatgacatggcagaataaccacccttagattt 31640928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 253
Target Start/End: Complemental strand, 12614511 - 12614483
Alignment:
Q  225 aaaatgctagatatcaagaatgattttat 253  Q
    |||||||||||||||||||||||||||||    
T  12614511 aaaatgctagatatcaagaatgattttat 12614483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 36880148 - 36880217
Alignment:
Q  263 tcaagaatgacatggcacaata----atcacctttagattt-cagtctcatttattaatctttcataaaa 327  Q
    |||||||||||||| |||||||    |||||| |||||||| ||||||||| |||||| |||||||||||    
T  36880148 tcaagaatgacatgacacaatatataatcacccttagattttcagtctcatctattaacctttcataaaa 36880217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 2e-62; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 46442114 - 46441985
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46442114 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 46442015  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  46442014 taaaaaaaagatacataacacccaccaccc 46441985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 36073619 - 36073491
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36073619 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 36073520  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  36073519 taaaa-aaagatacataacacccaccaccc 36073491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 223 - 349
Target Start/End: Original strand, 44893008 - 44893134
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44893008 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 44893107  T
Q  323 taaaagaaagatacataacaccgacca 349  Q
    ||||| |||||||||||||||| ||||    
T  44893108 taaaaaaaagatacataacacccacca 44893134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 223 - 349
Target Start/End: Complemental strand, 44893696 - 44893570
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44893696 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 44893597  T
Q  323 taaaagaaagatacataacaccgacca 349  Q
    ||||| |||||||||||||||| ||||    
T  44893596 taaaaaaaagatacataacacccacca 44893570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 47290336 - 47290207
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  47290336 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattattctttca 47290237  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  47290236 taaaaaaaagatacataacacccaccaccc 47290207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 53123301 - 53123172
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  53123301 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttca 53123202  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    || || |||||||||||||||| |||||||    
T  53123201 tacaaaaaagatacataacacccaccaccc 53123172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 225 - 352
Target Start/End: Complemental strand, 9089138 - 9089011
Alignment:
Q  225 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 324  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9089138 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttcata 9089039  T
Q  325 aaagaaagatacataacaccgaccaccc 352  Q
     || |||||||||||||||| |||||||    
T  9089038 caaaaaagatacataacacccaccaccc 9089011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 22199529 - 22199401
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22199529 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 22199430  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||||| |||||||    
T  22199429 taaaa-aaaaatacataacacccaccaccc 22199401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 31078614 - 31078735
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  31078614 ggaaaatgctagatatcaagaatgattttataaaaaaaattcaagaatgacatggcacaataatcatctttagatttcaatctcatttattaatctttca 31078713  T
Q  323 taaaagaaagatacataacacc 344  Q
    ||||| ||||||||||||||||    
T  31078714 taaaaaaaagatacataacacc 31078735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 225 - 352
Target Start/End: Complemental strand, 24128507 - 24128380
Alignment:
Q  225 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 324  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  24128507 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcata 24128408  T
Q  325 aaagaaagatacataacaccgaccaccc 352  Q
    ||| |||||||||||||| | |||||||    
T  24128407 aaaaaaagatacataacatccaccaccc 24128380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 49387682 - 49387812
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49387682 ggaaaatgttagatatcaaggatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 49387781  T
Q  323 t-aaaagaaagatacataacaccgaccaccc 352  Q
    | |||| |||||||||||||| | |||||||    
T  49387782 taaaaaaaaagatacataacatccaccaccc 49387812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 50156374 - 50156502
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||    
T  50156374 ggaaaatgttagatatcaagaatgattttataagaaaaattcaagaatgacatgacataataatcacc-ttagatttcagtctcatttattaatctttca 50156472  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  50156473 taaaaaaaagatacataacacccaccaccc 50156502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 223 - 351
Target Start/End: Original strand, 21802115 - 21802242
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  21802115 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctttca 21802214  T
Q  323 taaaagaaagatacataacaccgaccacc 351  Q
    ||||| ||| |||||||||||| ||||||    
T  21802215 taaaa-aaaaatacataacacccaccacc 21802242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 36073221 - 36073088
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36073221 ggaaaatgctagatatcaaaaatgattttataagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttca 36073122  T
Q  323 t----aaaagaaagatacataacaccgaccaccc 352  Q
    |    |||| |||||||||||||||| |||||||    
T  36073121 taaaaaaaaaaaagatacataacacccaccaccc 36073088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 2625107 - 2624980
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||| |||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2625107 ggaaaatgttagatatcaagaatgattttataagaaagattcaaaaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttca 2625008  T
Q  323 taaaagaaagatacataacaccgaccac 350  Q
    ||||| ||| |||||||||||| |||||    
T  2625007 taaaaaaaaaatacataacacccaccac 2624980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 4751717 - 4751587
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4751717 ggaaaatgctagatatcaagaataattttataagaaaaatttaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttca 4751618  T
Q  323 taaaaga-aagatacataacaccgaccaccc 352  Q
    ||||| | || |||||||||||| |||||||    
T  4751617 taaaaaagaaaatacataacacccaccaccc 4751587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 7744907 - 7745036
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||    
T  7744907 ggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacattgcacaataatcacctttagatttcaatctcatttattaatatttca 7745006  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||||| |||||||    
T  7745007 taaaaaaaaaatacataacacccaccaccc 7745036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 31726820 - 31726655
Alignment:
Q  1 ttagttggggtaaataattcaattgagaagattgaaatcctaatcacctgacacgtcagatgagagnnnnnnnnnnc-----------ctgcccctaaaa 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                      ||||||||||||    
T  31726820 ttagttggggtaaataattcaattgagaagattgaaatcctaatcacctgacacgtcagatgagagtttttttttttttcttttttttctgcccctaaaa 31726721  T
Q  90 ccaaaaacaattatatgcctgtcctacttgagtttttatttaccaaaatgtcctagtttcatctag 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31726720 ccaaaaacaattatatgcctgtcctacttgagtttttatttaccaaaatgtcctagtttcatctag 31726655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 10442582 - 10442713
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcattta-ttaatctttc 321  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10442582 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatttaatctttc 10442681  T
Q  322 -ataaaagaaagatacataacaccgaccaccc 352  Q
     | |||| ||| | |||||||||| |||||||    
T  10442682 aaaaaaaaaaaaaaacataacacccaccaccc 10442713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 223 - 327
Target Start/End: Original strand, 33530479 - 33530583
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33530479 ggaaaatgctagatatcaagaatgattttataaaaaagatccaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttca 33530578  T
Q  323 taaaa 327  Q
    |||||    
T  33530579 taaaa 33530583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 233 - 351
Target Start/End: Original strand, 23964269 - 23964388
Alignment:
Q  233 agatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat-aaaagaaa 331  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||| |||| |||    
T  23964269 agatatcaagaatgattttataagaaagatttaagaatgacatggcataataatcatctttagatttcaatctcatttattaatctttcataaaaaaaaa 23964368  T
Q  332 gatacataacaccgaccacc 351  Q
     |||||||||||| ||||||    
T  23964369 aatacataacacccaccacc 23964388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 17655699 - 17655579
Alignment:
Q  225 aaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 323  Q
    |||||||||||||| |||||||||||||| |||||| ||| |||||||||||| || |||||| |||||||||||||||||||||||||||| |||||||    
T  17655699 aaaatgctagatattaagaatgattttatcaagaaagatttaagaatgacatgacataataattacctttagatttcagtctcatttattaacctttcat 17655600  T
Q  324 aaaagaaagatacataacacc 344  Q
    |||| ||| | | ||||||||    
T  17655599 aaaaaaaatacatataacacc 17655579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 30563448 - 30563350
Alignment:
Q  254 aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgaccaccc 352  Q
    |||||| |||||||||||||||| ||||||||||||  |||||||||||||| ||||||||| ||||||||||| ||| |||||||||||| |||||||    
T  30563448 aagaaagattcaagaatgacatgacacaataatcacacttagatttcagtcttatttattaacctttcataaaaaaaaaatacataacacccaccaccc 30563350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 37219902 - 37219797
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    |||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||||| |||||||| | |||||||||| ||| ||||||||| |||||    
T  37219902 ggaaaatgttagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatcatccttagatttcaatcttatttattaacctttc 37219803  T
Q  322 ataaaa 327  Q
    ||||||    
T  37219802 ataaaa 37219797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 223 - 320
Target Start/End: Original strand, 11314046 - 11314144
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 320  Q
    ||||||||||||||||||||||||||||||| |||||| || ||||||||||||| ||||||||||||| |||||||  ||||| ||||||||| ||||    
T  11314046 ggaaaatgctagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatcacccttagattatagtcttatttattaaccttt 11314144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 225 - 313
Target Start/End: Complemental strand, 24392942 - 24392854
Alignment:
Q  225 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 313  Q
    ||||||||||||||||||||||||||   |||||| ||| ||||||||||| |||||||||||| | ||||||||||||||||||||||    
T  24392942 aaaatgctagatatcaagaatgatttatcaagaaatatttaagaatgacatagcacaataatcatccttagatttcagtctcatttatt 24392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 223 - 342
Target Start/End: Original strand, 37934736 - 37934855
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    |||||||| ||||||| | || ||||||||| |||||| |||||| ||||| ||| ||||||||||||| |||||||||| ||||||||||||| |||||    
T  37934736 ggaaaatgttagatattatgactgattttattaagaaagattcaataatgatatgacacaataatcacccttagatttcaatctcatttattaacctttc 37934835  T
Q  322 ataaaagaaagatacataaca 342  Q
    |||||| ||| ||||||||||    
T  37934836 ataaaa-aaaaatacataaca 37934855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 42671939 - 42671834
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    |||||||| |||||||||||||||||||||| |||||| |||||||||||||||| || ||||||||   |||||||| |||||||||| |||| |||||    
T  42671939 ggaaaatgttagatatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatcattcttagatttgagtctcatttgttaacctttc 42671840  T
Q  322 ataaaa 327  Q
     |||||    
T  42671839 gtaaaa 42671834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 33530749 - 33530676
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| ||||||||    
T  33530749 aatgctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 33530676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 25063369 - 25063436
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcac 289  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||    
T  25063369 ggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatcac 25063436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 10442850 - 10442777
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  10442850 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 10442777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 31078880 - 31078807
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  31078880 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 31078807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 49387949 - 49387876
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  49387949 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 49387876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 356
Target Start/End: Complemental strand, 44744698 - 44744571
Alignment:
Q  224 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 323  Q
    ||||||| |||||||||| ||||||||||| |   | |||||||||||||||| | ||||||| | | |||||||||||||| ||||||||| || | |     
T  44744698 gaaaatgttagatatcaaaaatgattttatca---agattcaagaatgacatgactcaataattatccttagatttcagtcttatttattaacctat-ac 44744603  T
Q  324 aaaagaaagatacataacaccgaccaccctatg 356  Q
    |||| ||| |||||||||||| |||||||||||    
T  44744602 aaaa-aaaaatacataacacccaccaccctatg 44744571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 2624841 - 2624914
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  2624841 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatcacccttagattt 2624914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 7745173 - 7745100
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  7745173 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 7745100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 21802383 - 21802310
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| ||||||||||  ||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  21802383 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 21802310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 22199265 - 22199338
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||| | ||||||||    
T  22199265 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcagccttagattt 22199338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 24392671 - 24392744
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | |||||||||||||||||||||||||| |||||||||| ||| ||||    
T  24392671 aatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcacccttaaattt 24392744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 36072951 - 36073024
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| ||||| |||| ||||||||    
T  36072951 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataaccacccttagattt 36073024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 46441848 - 46441921
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  46441848 aatgctatatatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatcacccttagattt 46441921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 47290070 - 47290143
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  47290070 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 47290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 53123034 - 53123108
Alignment:
Q  227 aatgctagatatcaagaatgattttat--aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| |  ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  53123034 aatgctatatatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatcacccttagattt 53123108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 4751450 - 4751523
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| | |||||||||||||||| ||||| |||| ||||||||    
T  4751450 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 4751523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 24128243 - 24128316
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||| | ||||||||    
T  24128243 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattt 24128316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 315
Target Start/End: Original strand, 36073256 - 36073349
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 315  Q
    |||||||||||||||  || ||||||||||| |||||| ||| |||||||| ||| || |||||| ||  |||||||||||||| |||||||||    
T  36073256 ggaaaatgctagatactaaaaatgattttatcaagaaagatttaagaatgatatgccagaataattactcttagatttcagtcttatttattaa 36073349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 36073354 - 36073427
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||| ||||    
T  36073354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttaaattt 36073427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 44893430 - 44893503
Alignment:
Q  227 aatgctagatatcaagaatgattttataagaaaaatt-caagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | | ||||||| |||||||||||||||| |||||||||| ||||||||    
T  44893430 aatgctatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 44893503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 215
Target Start/End: Complemental strand, 31726631 - 31726596
Alignment:
Q  180 agtgctatgtcacgccaaaccaaatggtgtgacatc 215  Q
    ||||||||||||||||||||||||||||||||||||    
T  31726631 agtgctatgtcacgccaaaccaaatggtgtgacatc 31726596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 42671675 - 42671746
Alignment:
Q  229 tgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||| ||||||| || |||||||| || ||||||| ||||||||||||||| |||||||||| ||||||||    
T  42671675 tgctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatcacccttagattt 42671746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 299
Target Start/End: Original strand, 17655461 - 17655507
Alignment:
Q  253 taagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||| |||||||||||||||||| |||||||||| ||||||||    
T  17655461 taagaaaatttcaagaatgacatggcagaataatcacccttagattt 17655507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 9088902 - 9088947
Alignment:
Q  254 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  9088902 aagaaaatttcaagaatgacatggcagaataatcacccttagattt 9088947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 23964518 - 23964453
Alignment:
Q  235 atatcaagaatgattttataagaaaaattc-aagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||| |||||||| | |||||||  ||||||||||||||| |||||||||| ||||||||    
T  23964518 atatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattt 23964453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 50156639 - 50156566
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||| ||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  50156639 aatgctatatattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 50156566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 299
Target Start/End: Complemental strand, 36073795 - 36073731
Alignment:
Q  236 tatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||||| |||||||| |||||| ||| |||||||||||| || ||||||||| |||||||||    
T  36073795 tatcaagaaagattttatgaagaaagatttaagaatgacatgacaaaataatcacttttagattt 36073731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 44893275 - 44893201
Alignment:
Q  227 aatgctagatatcaagaatgattttataagaaaaa--ttcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||| ||||| |||||| | | |||||  |||||||||||||||||| |||||||||| ||||||||    
T  44893275 aatgctatatattaagaaagattttttcaaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 44893201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 37935002 - 37934929
Alignment:
Q  227 aatgctagatatcaagaatgattttataagaaaaat-tcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| ||||||| || |||||||| | |||||| ||||||||||||||| | |||| ||||| ||||||||    
T  37935002 aatgctatatatcaaaaaagattttatcaaaaaaatgtcaagaatgacatggtagaatactcacccttagattt 37934929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 2e-62; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 51737775 - 51737646
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51737775 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 51737676  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  51737675 taaaaaaaagatacataacacccaccaccc 51737646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 36966503 - 36966632
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36966503 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaataacatggcacaataatcacctttagatttcagtctcatttattaatctttca 36966602  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  36966603 taaaaaaaagatacataacacccaccaccc 36966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 41876237 - 41876366
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41876237 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttca 41876336  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  41876337 taaaaaaaagatacataacacccaccaccc 41876366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 6883757 - 6883628
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  6883757 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcataatattcacctttagatttcagtctcatttattaatctttca 6883658  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  6883657 taaaaaaaagatacataacacccaccaccc 6883628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 19015674 - 19015545
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19015674 ggaaaatgctacatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 19015575  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    || || |||||||||||||||| |||||||    
T  19015574 tacaaaaaagatacataacacccaccaccc 19015545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 37821629 - 37821750
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37821629 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 37821728  T
Q  323 taaaagaaagatacataacacc 344  Q
    ||||| ||||||||||||||||    
T  37821729 taaaaaaaagatacataacacc 37821750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 224 - 352
Target Start/End: Complemental strand, 40215257 - 40215129
Alignment:
Q  224 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 323  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40215257 gaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatatttcat 40215158  T
Q  324 aaaagaaagatacataacaccgaccaccc 352  Q
    |||| ||| |||||||||||| |||||||    
T  40215157 aaaaaaaaaatacataacacccaccaccc 40215129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 25463946 - 25463817
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25463946 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttaagtctcatttattaatctttca 25463847  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||||| |||||||    
T  25463846 taaaaaaaaaatacataacacccaccaccc 25463817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 25973677 - 25973550
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  25973677 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttaaatttcagtctcatttattaatctttca 25973578  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||  ||| |||||||||||| |||||||    
T  25973577 taaa--aaaaatacataacacccaccaccc 25973550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 223 - 349
Target Start/End: Original strand, 20304925 - 20305052
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20304925 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatcaatctttca 20305024  T
Q  323 t-aaaagaaagatacataacaccgacca 349  Q
    | |||| ||| |||||||||||| ||||    
T  20305025 taaaaaaaaaaatacataacacccacca 20305052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 44094967 - 44094839
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44094967 ggaaaatgctagatatcaagaattattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 44094868  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    | ||||||| |||||||||||| |||||||    
T  44094867 t-aaagaaaaatacataacacccaccaccc 44094839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 9910086 - 9910217
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  9910086 ggaaaatgttagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagacttatttattaatctttca 9910185  T
Q  323 t--aaaagaaagatacataacaccgaccaccc 352  Q
    |  |||| |||||| ||||||||| |||||||    
T  9910186 taaaaaaaaaagatgcataacacccaccaccc 9910217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 18404718 - 18404614
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18404718 ggaaaatgctagatatcaagaatgattttataagaaagatttaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatctttca 18404619  T
Q  323 taaaa 327  Q
    |||||    
T  18404618 taaaa 18404614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 3559887 - 3559758
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  3559887 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgatatgacacaataatcacctttatatttcagtctcatttattaatctttca 3559788  T
Q  323 taaaagaaagataca-taacaccgaccaccc 352  Q
    ||||| ||| ||||| ||||||| |||||||    
T  3559787 taaaa-aaaaatacattaacacccaccaccc 3559758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 32000061 - 32000191
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |  |||||    
T  32000061 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattca--tttca 32000158  T
Q  323 taaaa---gaaagatacataacaccgaccaccc 352  Q
    |||||    ||| |||||||||||| |||||||    
T  32000159 taaaaaataaaaaatacataacacccaccaccc 32000191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 33786426 - 33786516
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 313  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33786426 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 33786516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 225 - 313
Target Start/End: Complemental strand, 40273976 - 40273888
Alignment:
Q  225 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 313  Q
    ||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40273976 aaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 40273888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 223 - 299
Target Start/End: Original strand, 19722894 - 19722970
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  19722894 ggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacctttagattt 19722970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 225 - 327
Target Start/End: Original strand, 44690818 - 44690921
Alignment:
Q  225 aaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 323  Q
    |||||| |||||||||| ||||||||||| |||||| ||||||||||||||||||| |||||||||| ||||||| |||||| |||||||||||||| ||    
T  44690818 aaaatgttagatatcaataatgattttatcaagaaagattcaagaatgacatggcagaataatcacccttagattccagtcttatttattaatcttttat 44690917  T
Q  324 aaaa 327  Q
    ||||    
T  44690918 aaaa 44690921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 10167670 - 10167565
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    |||||||| || |||| |||||||||||||||| |||| ||| |||||| | |||  ||||||||||||||||||||||||||| |||||||||| ||||    
T  10167670 ggaaaatgttacatattaagaatgattttataaaaaaatatttaagaataatatgatacaataatcacctttagatttcagtcttatttattaatttttc 10167571  T
Q  322 ataaaa 327  Q
    ||||||    
T  10167570 ataaaa 10167565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 299
Target Start/End: Complemental strand, 33786696 - 33786623
Alignment:
Q  226 aaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||| ||||    
T  33786696 aaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttaaattt 33786623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 223 - 349
Target Start/End: Original strand, 22157333 - 22157459
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||| ||||| ||  || ||   ||| ||||||||||||| | |||||||||  ||| |||||| ||| |||||||||  |||||    
T  22157333 ggaaaatgctagatatcaaaaatgaattcttatgatggatttaagaatgacatgggagaataatcacacttaaatttcaatcttatttattaacatttca 22157432  T
Q  323 taaaagaaagatacataacaccgacca 349  Q
    ||||||||| |||||||||||| ||||    
T  22157433 taaaagaaaaatacataacacctacca 22157459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 27523050 - 27523171
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    |||||||| || ||||||||||||||||||| |||||| ||||||||||   |||||| | |||||||| || ||||| ||||| |||||||||  ||||    
T  27523050 ggaaaatgttatatatcaagaatgattttatcaagaaagattcaagaatcgtatggcagattaatcaccctttgattttagtcttatttattaacttttc 27523149  T
Q  322 ataaaagaaagatacataacacc 344  Q
    |||||| ||| ||||||||||||    
T  27523150 ataaaa-aaaaatacataacacc 27523171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 16045859 - 16045786
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  16045859 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 16045786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 40214992 - 40215065
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  40214992 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 40215065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 40273706 - 40273779
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||||||||||| |||||| | ||||||||||||||||||||||| || |||||||||| ||||||||    
T  40273706 aatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatcacccttagattt 40273779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 18404446 - 18404519
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||| | |||||||||||||||||||    
T  18404446 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatcacctttagattt 18404519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 25463680 - 25463753
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  25463680 aatgctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatcacccttagattt 25463753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 44094702 - 44094775
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| ||||||||||  ||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  44094702 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 44094775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 52064373 - 52064445
Alignment:
Q  224 gaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttag 295  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||||||||||| || |||| ||||| ||||    
T  52064373 gaaaatgctagatatcaaaaatgattttatcaagaaagattcaagaatgacatgacagaatattcacccttag 52064445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 327
Target Start/End: Complemental strand, 52329507 - 52329441
Alignment:
Q  261 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaa 327  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||| | |||||||  ||||||||||    
T  52329507 attcaagaatgacatagcagaataatcacccttagatttcagtcttaattattaacgtttcataaaa 52329441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 6883491 - 6883564
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||| ||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  6883491 aatgctatatattaagaaagatttttttaagaaaatttcaagaatgacatggcagaataatcacccttagattt 6883564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 9910354 - 9910281
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||| | ||||||||    
T  9910354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcaaccttagattt 9910281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 19015408 - 19015481
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  19015408 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 19015481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 32000328 - 32000255
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||||||||||||||||||| || ||||| |||| ||||||||    
T  32000328 aatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataaccacccttagattt 32000255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 36966769 - 36966696
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  36966769 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 36966696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 37821895 - 37821822
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  37821895 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 37821822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 3559621 - 3559694
Alignment:
Q  227 aatgctagatatcaagaatgattttataagaaaaattc-aagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| | |||||||  ||||||||||||||| |||||||||| ||| ||||    
T  3559621 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttaaattt 3559694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 41876503 - 41876434
Alignment:
Q  227 aatgctagatatcaagaatgattttataagaaaaattc-aagaatgacatggcacaataatcacctttag 295  Q
    ||||||| |||||||||| |||||| | | |||||||  ||||||||||||||| |||||||||| ||||    
T  41876503 aatgctatatatcaagaaagattttttcaaaaaaattttaagaatgacatggcagaataatcacccttag 41876434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 119; Significance: 1e-60; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 223 - 349
Target Start/End: Complemental strand, 26206 - 26080
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26206 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 26107  T
Q  323 taaaagaaagatacataacaccgacca 349  Q
    ||||| |||||||||||||||| ||||    
T  26106 taaaaaaaagatacataacacccacca 26080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 223 - 349
Target Start/End: Complemental strand, 16254 - 16128
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16254 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttca 16155  T
Q  323 taaaagaaagatacataacaccgacca 349  Q
    ||||| |||||||||||||||| ||||    
T  16154 taaaaaaaagatacataacacccacca 16128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 349
Target Start/End: Complemental strand, 8605 - 8546
Alignment:
Q  290 ctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgacca 349  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  8605 ctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccacca 8546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 8414 - 8479
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  8414 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 8479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 15996 - 16061
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  15996 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 16061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 25948 - 26013
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  25948 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 26013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 4e-60; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 23267857 - 23267986
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23267857 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 23267956  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  23267957 taaaaaaaagatacataacacccaccaccc 23267986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 33380477 - 33380348
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33380477 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 33380378  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    | ||| |||||||||||||||| |||||||    
T  33380377 ttaaaaaaagatacataacacccaccaccc 33380348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 223 - 356
Target Start/End: Complemental strand, 10662158 - 10662024
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10662158 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 10662059  T
Q  323 t-aaaagaaagatacataacaccgaccaccctatg 356  Q
    | |||| |||||||||||||||| |||||||||||    
T  10662058 taaaaaaaaagatacataacacccaccaccctatg 10662024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 35161029 - 35160898
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35161029 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 35160930  T
Q  323 t--aaaagaaagatacataacaccgaccaccc 352  Q
    |  |||| |||||||||||||||| |||||||    
T  35160929 taaaaaaaaaagatacataacacccaccaccc 35160898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 7475303 - 7475432
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||    
T  7475303 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgatatgacataataatcacctttagatttcagtctcatttattaatctttca 7475402  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  7475403 taaaaaaaagatacataacacccaccaccc 7475432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 9293370 - 9293500
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  9293370 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctttca 9293469  T
Q  323 t-aaaagaaagatacataacaccgaccaccc 352  Q
    | |||| ||| |||||||||||| |||||||    
T  9293470 taaaaaaaaaaatacataacacccaccaccc 9293500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 227 - 352
Target Start/End: Complemental strand, 3989342 - 3989217
Alignment:
Q  227 aatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaa 326  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3989342 aatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataataacctttagatttcagtctcatttattaatctttcataaa 3989243  T
Q  327 agaaagatacataacaccgaccaccc 352  Q
    | ||| |||||||||||| |||||||    
T  3989242 aaaaaaatacataacacccaccaccc 3989217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 13355118 - 13354990
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13355118 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttca 13355019  T
Q  323 t-aaaagaaagatacataacaccgaccac 350  Q
    | |||| ||| |||||||||||| |||||    
T  13355018 taaaaaaaaaaatacataacacccaccac 13354990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 226 - 352
Target Start/End: Original strand, 31174633 - 31174758
Alignment:
Q  226 aaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataa 325  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | ||||||||||||| |||||||||||||||||||||||    
T  31174633 aaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataaactcctttagatttcaatctcatttattaatctttcataa 31174732  T
Q  326 aagaaagatacataacaccgaccaccc 352  Q
    || ||| |||||||||||| |||||||    
T  31174733 aa-aaaaatacataacacccaccaccc 31174758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 43331182 - 43331053
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||   |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||   |    
T  43331182 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattcctctcata 43331083  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
     |||| ||| |||||||||||| |||||||    
T  43331082 aaaaaaaaaaatacataacacccaccaccc 43331053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 264 - 352
Target Start/End: Complemental strand, 21936311 - 21936223
Alignment:
Q  264 caagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgaccaccc 352  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||| |||||||    
T  21936311 caagaatgacatggcacaataatcacctttagatttcagtttcatttattaatctttcataaaaaaaaaatacataacacccaccaccc 21936223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 22592983 - 22592876
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttaga--tttcagtctcatttattaatctt 319  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||  ||||||||| ||||||||| |||    
T  22592983 ggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttttcagtcttatttattaacctt 22592884  T
Q  320 tcataaaa 327  Q
    ||||||||    
T  22592883 tcataaaa 22592876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 9723677 - 9723546
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    |||||||| ||||||||||||||||||| || |||||| ||| |||||||||||| || ||||||||||||||||||||||||| ||||||| |  ||||    
T  9723677 ggaaaatgttagatatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatcacctttagatttcagtcttatttattcacttttc 9723578  T
Q  322 at-aaaagaaagatacataacaccgaccaccc 352  Q
    || |||| ||| |||||||||||| |||||||    
T  9723577 ataaaaaaaaaaatacataacacccaccaccc 9723546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 225 - 313
Target Start/End: Original strand, 21393483 - 21393570
Alignment:
Q  225 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 313  Q
    ||||||||||||||||||||||||||   ||||||| ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  21393483 aaaatgctagatatcaagaatgatttatcaagaaaa-ttcaagaatgacatgacacaataatcacccttaaatttcagtctcatttatt 21393570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 16767288 - 16767361
Alignment:
Q  254 aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaa 327  Q
    |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||||||||    
T  16767288 aagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttcataaaa 16767361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 34320963 - 34321042
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 313  Q
    |||||||||||||||||||||||||||||           |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34320963 ggaaaatgctagatatcaagaatgatttt-----------tcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 34321042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 14941427 - 14941354
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  14941427 aatgctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatcacccttagattt 14941354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 9293637 - 9293564
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  9293637 aatgctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatcacccttagattt 9293564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 10661891 - 10661964
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  10661891 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 10661964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 263 - 351
Target Start/End: Original strand, 14941199 - 14941290
Alignment:
Q  263 tcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataa---aagaaagatacataacaccgaccacc 351  Q
    |||||||||||||| ||||||||||| | |||||||||| ||| ||||||||| |||||||||   || ||| |||||||||||| ||||||    
T  14941199 tcaagaatgacatgacacaataatcatccttagatttcaatcttatttattaacctttcataaaataaaaaaaatacataacacccaccacc 14941290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 21936085 - 21936158
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  21936085 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 21936158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 23268123 - 23268050
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  23268123 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 23268050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 31174887 - 31174822
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  31174887 atatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatcacccttagattt 31174822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 35160761 - 35160834
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  35160761 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 35160834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 39819317 - 39819272
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaaga 268  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  39819317 ggaaaatgttagatatcaagaatgattttataagaaaaattcaaga 39819272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 40262531 - 40262660
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||  |||  | ||   ||||||||||||||||| | |||||| ||  |||||||||||| | |||| ||||  |||||    
T  40262531 ggaaaatgctagatatcaagaatggattttcacgatggattcaagaatgacatggtagaataataactcttagatttcagttttatttgttaacgtttca 40262630  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| | | |||||||||||| |||||||    
T  40262631 taaaaaataaatacataacacccaccaccc 40262660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 43330916 - 43330989
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | || ||||||||||||||||||||||| |||||||||| ||||||||    
T  43330916 aatgctatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatcacccttagattt 43330989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 37335894 - 37335824
Alignment:
Q  244 atgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 313  Q
    |||||||||| |||||| ||| || ||||||||| |||| |||||||| ||||||||||||||||||||||    
T  37335894 atgattttatcaagaaagatttaataatgacatgacacagtaatcacccttagatttcagtctcatttatt 37335824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 7475569 - 7475496
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||  | |||||||||| ||||||||    
T  7475569 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatcacccttagattt 7475496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 13354858 - 13354923
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||| ||| ||||||||    
T  13354858 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattt 13354923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 21393749 - 21393676
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| ||||||||||  ||||| | |||||||||| ||||||||||||| | |||||||||| ||||||||    
T  21393749 aatgctatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatcacccttagattt 21393676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 27847644 - 27847709
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||| ||||| |||||||| |||||| |||||||||||||||| || |||||||||| ||||||||    
T  27847644 atataaagaaagattttattaagaaagattcaagaatgacatgacagaataatcaccgttagattt 27847709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 33380211 - 33380284
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||  |||||||||| ||||||||    
T  33380211 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatcacccttagattt 33380284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 298
Target Start/End: Original strand, 37335744 - 37335789
Alignment:
Q  253 taagaaaaattcaagaatgacatggcacaataatcacctttagatt 298  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  37335744 taagaaagattcaagaatgacatggcagaataatcacttttagatt 37335789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 3989108 - 3989153
Alignment:
Q  254 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  3989108 aagaaaattttaagaatgacatggcagaataatcacccttagattt 3989153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 9723409 - 9723482
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||| ||||| |||||||| |||||| ||| |||||||||||| || |||||||||| ||| ||||    
T  9723409 aatgctatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatcacccttaaattt 9723482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 22591494 - 22591547
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 287  Q
    |||||||||| |||||||| || |||||||||||||||| |||||| |||||||    
T  22591494 atatcaagaaagattttattaaaaaaaattcaagaatgatatggcagaataatc 22591547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 223 - 349
Target Start/End: Original strand, 34482683 - 34482809
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34482683 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 34482782  T
Q  323 taaaagaaagatacataacaccgacca 349  Q
    ||||| |||||||||||| ||| ||||    
T  34482783 taaaaaaaagatacataatacccacca 34482809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 3137209 - 3137330
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3137209 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 3137308  T
Q  323 taaaagaaagatacataacacc 344  Q
    || || ||||||||||||||||    
T  3137309 tacaaaaaagatacataacacc 3137330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 223 - 356
Target Start/End: Original strand, 37216848 - 37216981
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37216848 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttca 37216947  T
Q  323 taaaagaaagatacataacaccgaccaccctatg 356  Q
    ||||| ||| |||||||||||| |||||||||||    
T  37216948 taaaaaaaaaatacataacacccaccaccctatg 37216981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 37522323 - 37522194
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37522323 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcataataatcacctttagatttcagtctcatttattaatctttca 37522224  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  37522223 taaaaaaaagatacataacacccaccaccc 37522194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 22426140 - 22426268
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22426140 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatctttca 22426239  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||||| |||||||    
T  22426240 taaaa-aaaaatacataacacccaccaccc 22426268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 33114064 - 33113934
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33114064 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttca 33113965  T
Q  323 t-aaaagaaagatacataacaccgaccaccc 352  Q
    | |||| ||| |||||||||||| |||||||    
T  33113964 taaaaaaaaaaatacataacacccaccaccc 33113934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 3456334 - 3456205
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||    
T  3456334 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacactaatcatctttagatttcagtctcatttattaatctttca 3456235  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||||| |||||||    
T  3456234 taaaaaaaaaatacataacacccaccaccc 3456205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 3574321 - 3574450
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  3574321 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctctagatttcagtctcatttattaatctttca 3574420  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||||| |||||||    
T  3574421 taaaaaaaaaatacataacacccaccaccc 3574450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 19650695 - 19650823
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19650695 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 19650794  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||||| |||||||    
T  19650795 taaaa-aaaaatacataacacccaccaccc 19650823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 30385670 - 30385542
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30385670 ggaaaatgctaaatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 30385571  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| | | |||||||||||| |||||||    
T  30385570 taaaa-ataaatacataacacccaccaccc 30385542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 8320378 - 8320499
Alignment:
Q  224 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 323  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8320378 gaaaatgctagatatcaataatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 8320477  T
Q  324 -aaaagaaagatacataacacc 344  Q
     |||| ||| ||||||||||||    
T  8320478 aaaaaaaaaaatacataacacc 8320499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 3089689 - 3089585
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3089689 ggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 3089590  T
Q  323 taaaa 327  Q
    |||||    
T  3089589 taaaa 3089585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 6042147 - 6042043
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6042147 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatttttca 6042048  T
Q  323 taaaa 327  Q
    |||||    
T  6042047 taaaa 6042043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 225 - 351
Target Start/End: Complemental strand, 33145980 - 33145854
Alignment:
Q  225 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 324  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  33145980 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttcata 33145881  T
Q  325 aaagaaagatacataacaccgaccacc 351  Q
    ||| ||| ||||||| |||| ||||||    
T  33145880 aaaaaaaaatacataccacccaccacc 33145854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 48161176 - 48161046
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  48161176 ggaaaatgctagatatcaagaatgattttataagaaatatccaagaacgacatgacacaataatcacctttagatttcagtctcatttattaatttttca 48161077  T
Q  323 t-aaaagaaagatacataacaccgaccaccc 352  Q
    | |||| ||| |||||||||||| |||||||    
T  48161076 taaaaaaaaaaatacataacacccaccaccc 48161046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 2754989 - 2754885
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2754989 ggaaaatgctagatatcaagaatcattttataagaaagatttaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatctttca 2754890  T
Q  323 taaaa 327  Q
    |||||    
T  2754889 taaaa 2754885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 47738382 - 47738277
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    |||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||    
T  47738382 ggaaaatgttagatatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatcatccttagatttcagtctcatttattaacctttc 47738283  T
Q  322 ataaaa 327  Q
    ||||||    
T  47738282 ataaaa 47738277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 223 - 351
Target Start/End: Complemental strand, 26613017 - 26612891
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    |||||||| |||||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  26613017 ggaaaatgttagatatcaataatgattttattaagaaagattcaagaataacatggcacaataatcacccttagatttcagtctcatttattaacctttc 26612918  T
Q  322 ataaaagaaagatacataacaccgaccacc 351  Q
    ||||   ||| |||||||||||| ||||||    
T  26612917 ataa---aaaaatacataacacccaccacc 26612891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 225 - 345
Target Start/End: Complemental strand, 42921394 - 42921273
Alignment:
Q  225 aaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 323  Q
    |||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||    
T  42921394 aaaatgctagatattaagaatgattttatcaagaaatatttaagaatgacatggcacaacaatcacccttaaatttcagtctcatttattaacctttcat 42921295  T
Q  324 aaaagaaagatacataacaccg 345  Q
    |||| ||| |||||||| ||||    
T  42921294 aaaaaaaaaatacataataccg 42921273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 223 - 349
Target Start/End: Original strand, 36864827 - 36864952
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    ||||||||||||||||||||||||||||||| | |||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||  ||||    
T  36864827 ggaaaatgctagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacatttc 36864926  T
Q  322 ataaaagaaagatacataacaccgacca 349  Q
    ||| |  ||| |||||||||||| ||||    
T  36864927 atata--aaaaatacataacacccacca 36864952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 40328102 - 40327997
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||||||| ||||||| | ||||     
T  40328102 ggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttatttacctttg 40328003  T
Q  322 ataaaa 327  Q
    ||||||    
T  40328002 ataaaa 40327997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 41224504 - 41224374
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||| |||||| |||||||||||  |||||||    
T  41224504 ggaaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatggcacaataatcacccttaaatttcaatctcatttatt--tctttca 41224407  T
Q  323 t---aaaagaaagatacataacaccgaccaccc 352  Q
    |   |||| ||| |||||||||||| |||||||    
T  41224406 taaaaaaaaaaaaatacataacacccaccaccc 41224374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 8361834 - 8361924
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 313  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  8361834 ggaaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatgacacaataatcacccttagatttcagtctcatttatt 8361924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 9796824 - 9796953
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||| ||||||||||||  ||||||||||||||||||||||   ||||||    
T  9796824 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatgtcacaataatcactcttagatttcagtctcatttatt--cctttca 9796921  T
Q  323 t--aaaagaaagatacataacaccgaccaccc 352  Q
    |  |||||||| |||||||| ||| |||||||    
T  9796922 taaaaaagaaaaatacataagacccaccaccc 9796953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 33839794 - 33839701
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaa 327  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| |||||||||||    
T  33839794 atatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttaaatttcagtctcatttattaacctttcataaaa 33839701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 224 - 326
Target Start/End: Complemental strand, 46919164 - 46919061
Alignment:
Q  224 gaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||| |||||||||||||||||||||| | |||| |||||| |||||||||||| ||||||||||| |||||||| |||| |||||||||||| |||    
T  46919164 gaaaatgttagatatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatcacctctagatttcggtcttatttattaatctatca 46919065  T
Q  323 taaa 326  Q
    ||||    
T  46919064 taaa 46919061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 24343820 - 24343688
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    |||||||| |||||||||||||||||||||| | |||| ||||||||||||||||  |  ||||||||| |||||||||||||| ||||||||| |||||    
T  24343820 ggaaaatgttagatatcaagaatgattttatcaaaaaagattcaagaatgacatgatatgataatcacccttagatttcagtcttatttattaacctttc 24343721  T
Q  322 --ataaaagaaagatacataacaccgaccaccc 352  Q
      | |||| ||| |||||||||||| |||||||    
T  24343720 aaaaaaaaaaaaaatacataacacccaccaccc 24343688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 42298122 - 42298005
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||| |||||||||||||||||||          ||||||||||||| |||||||| |||| |||||||||||||||||||||||| ||||||    
T  42298122 ggaaaatgctaaatatcaagaatgattttat----------caagaatgacatgacacaataaccacccttagatttcagtctcatttattaacctttca 42298033  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||  ||| |||||||||| | |||||||    
T  42298032 taaa--aaaaatacataacatctaccaccc 42298005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 238 - 352
Target Start/End: Original strand, 41883031 - 41883147
Alignment:
Q  238 tcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat-aaaagaaagata 335  Q
    |||| ||||||||||| |||||| ||||||||||||||||| | |||||||| |||| ||||||||||| |||||| || |||| || |||| ||| |||    
T  41883031 tcaaaaatgattttatgaagaaagattcaagaatgacatggtaaaataatcatctttggatttcagtcttatttatcaaccttttataaaaaaaaaaata 41883130  T
Q  336 cataacaccgaccaccc 352  Q
    ||||||||| |||||||    
T  41883131 cataacacccaccaccc 41883147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 2754721 - 2754794
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  2754721 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacctttagattt 2754794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 3137475 - 3137402
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  3137475 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatcacccttagattt 3137402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 3574588 - 3574515
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  3574588 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 3574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 6041888 - 6041961
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  6041888 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 6041961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 9797082 - 9797017
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||| |||||| | |||||||||||||||||||||||||| |||||||||| ||||||||    
T  9797082 atatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattt 9797017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 33145717 - 33145789
Alignment:
Q  227 aatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| | |||| || ||||||||||||||| |||||||||| ||||||||    
T  33145717 aatgctatatatcaagaaagattttattaaaaaattttaagaatgacatggcagaataatcacccttagattt 33145789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 11347476 - 11347409
Alignment:
Q  286 tcacctttagatttcagtctcatttattaatctttcat-aaaagaaagatacataacaccgaccaccc 352  Q
    |||||||||||||||| |||||||||||||| |||||| |||| ||| |||||||||||| |||||||    
T  11347476 tcacctttagatttcaatctcatttattaatttttcataaaaaaaaaaatacataacacccaccaccc 11347409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 8362078 - 8362033
Alignment:
Q  254 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  8362078 aagaaaaattcaagaatgacatggcagaataatcacccttagattt 8362033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 11347272 - 11347345
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||| ||| ||||||||    
T  11347272 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataataacccttagattt 11347345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 37217114 - 37217041
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||| ||||    
T  37217114 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 37217041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 47738117 - 47738182
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||| |||||||| |||||| |||||||||||| |||||| |||||| ||||||||||||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataattacctttagattt 47738182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 19650953 - 19650888
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  19650953 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcaccattagattt 19650888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 30385015 - 30385088
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||  ||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||||| ||| ||||    
T  30385015 aatgctatttatcaagaaagattttatcaagaaaatttcaaaaatgacatggcagaataatcacccttatattt 30385088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 34482971 - 34482898
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||| |||| | |||||||||| ||||||||    
T  34482971 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatcacccttagattt 34482898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 41883256 - 41883211
Alignment:
Q  254 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||||    
T  41883256 aagaaaaattcaagaatgacatggcagaataatcacccttaaattt 41883211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 22426397 - 22426332
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||| ||||| |||||||| ||||||| || || |||||||||||| |||||||||| ||||||||    
T  22426397 atattaagaaagattttatcaagaaaattttaaaaatgacatggcagaataatcacccttagattt 22426332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 26612797 - 26612862
Alignment:
Q  235 atatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| || |||||||||| |||| ||||||||||||||||||| ||||| ||  |||||||||    
T  26612797 atatcaaaaaagattttataaaaaaaaattcaagaatgacatggcagaataaccatttttagattt 26612862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 1e-57; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 48880722 - 48880851
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  48880722 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacatttagatttcagtttcatttattaatctttca 48880821  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||||||| |||||||    
T  48880822 taaaaaaaagatacataacacccaccaccc 48880851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 30848839 - 30848718
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30848839 ggaaaatgctagatatcaagaatgcttttataagaaaaattcaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatctttca 30848740  T
Q  323 taaaagaaagatacataacacc 344  Q
    ||||| ||||||||||||||||    
T  30848739 taaaaaaaagatacataacacc 30848718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 35445667 - 35445546
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35445667 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgatatgacacaataatcacctttagatttcagtctcatttattaatctttca 35445568  T
Q  323 taaaagaaagatacataacacc 344  Q
    ||||| ||||||||||||||||    
T  35445567 taaaaaaaagatacataacacc 35445546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 3962248 - 3962120
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3962248 ggaaaatgctagatatcaagaatgattttataagaaatatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 3962149  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||||| |||||||    
T  3962148 taaaa-aaaaatacataacacccaccaccc 3962120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 24395241 - 24395113
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24395241 ggaaaatgctagatatcaagaatgattttataaaaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 24395142  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| | | |||||||||||| |||||||    
T  24395141 taaaa-ataaatacataacacccaccaccc 24395113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 42612081 - 42611952
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42612081 ggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttca 42611982  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||||| |||||||    
T  42611981 taaaaaaaaaatacataacacccaccaccc 42611952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 45637981 - 45637853
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45637981 ggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 45637882  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||| | |||||||    
T  45637881 taaaa-aaaaatacataacatccaccaccc 45637853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 225 - 351
Target Start/End: Original strand, 4974532 - 4974658
Alignment:
Q  225 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 324  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  4974532 aaaatgctagatatcaagaatgattttataaaaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcata 4974631  T
Q  325 aaagaaagatacataacaccgaccacc 351  Q
    ||| ||| |||||||||||| ||||||    
T  4974632 aaaaaaaaatacataacacccaccacc 4974658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 25167651 - 25167766
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||    
T  25167651 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctca------aatctttca 25167744  T
Q  323 taaaagaaagatacataacacc 344  Q
    ||||| ||||||||||||||||    
T  25167745 taaaaaaaagatacataacacc 25167766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 15329544 - 15329440
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15329544 ggaaaatgctagatataaagaatgattttataagaaatattcaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttca 15329445  T
Q  323 taaaa 327  Q
    |||||    
T  15329444 taaaa 15329440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 34483108 - 34483004
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34483108 ggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttca 34483009  T
Q  323 taaaa 327  Q
    |||||    
T  34483008 taaaa 34483004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 223 - 327
Target Start/End: Original strand, 15577642 - 15577746
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  15577642 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgtcacaataatcacctttagatttcagtctcatttattaatctttta 15577741  T
Q  323 taaaa 327  Q
    |||||    
T  15577742 taaaa 15577746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 35876514 - 35876410
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| ||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35876514 ggaaaatgctagatatcaagaatgattttataagaaatatctaaaaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 35876415  T
Q  323 taaaa 327  Q
    |||||    
T  35876414 taaaa 35876410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 42696354 - 42696224
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    |||||||| |||||||||| ||||||||||| || ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||  ||||    
T  42696354 ggaaaatgttagatatcaataatgattttatcaaaaaaaattcaagaatgacatggtacaataatcacccttagatttcagtctcatttattaacttttc 42696255  T
Q  322 ataaaagaaagatacataacaccgaccaccc 352  Q
    |||||| ||| |||||||||| | |||||||    
T  42696254 ataaaaaaaaaatacataacatccaccaccc 42696224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 224 - 352
Target Start/End: Original strand, 37476876 - 37477004
Alignment:
Q  224 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 323  Q
    |||||||||||||||||||||||||||   |||||| ||| || ||||||||||||||||||||||| |||||||||||||||||||||| || ||  |     
T  37476876 gaaaatgctagatatcaagaatgatttatcaagaaagatttaataatgacatggcacaataatcacccttagatttcagtctcatttattcattttatac 37476975  T
Q  324 aaaagaaagatacataacaccgaccaccc 352  Q
    | || ||| |||||||||||| |||||||    
T  37476976 agaaaaaaaatacataacacccaccaccc 37477004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 29737406 - 29737313
Alignment:
Q  232 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 324  Q
    |||||||||||||||||||||| |||||| ||| |||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||||||    
T  29737406 tagatatcaagaatgattttatcaagaaagatttaagaataacatgtcacaataatcacccttagatttcagtctcatttattaacctttcata 29737313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 18037247 - 18037119
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||| ||||||||   |||||| ||| ||||||||||||| |||||||||||| ||||||||||||| ||||||||   || |||    
T  18037247 ggaaaatgctagatatcaacaatgatttatcaagaaagatttaagaatgacatggtacaataatcacccttagatttcagtcacatttatt--cctctca 18037150  T
Q  323 t-aaaagaaagatacataacaccgaccaccc 352  Q
    | |||| ||| |||||||||||| |||||||    
T  18037149 taaaaaaaaaaatacataacacccaccaccc 18037119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 15238654 - 15238564
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 313  Q
    ||||||||||||||||||||||||||||   || ||| ||| |||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  15238654 ggaaaatgctagatatcaagaatgatttatcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatttatt 15238564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 20009895 - 20010014
Alignment:
Q  225 aaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 323  Q
    |||||| ||||||||| |||||||||||| | |||| |||||||||||||||| |||||||||||   |||||||| ||||||||||||||| |||| ||    
T  20009895 aaaatgatagatatcatgaatgattttatcaaaaaagattcaagaatgacatgacacaataatcatacttagattttagtctcatttattaacctttaat 20009994  T
Q  324 aaaagaaagatacataacacc 344  Q
    || | ||| ||||||||||||    
T  20009995 aaga-aaaaatacataacacc 20010014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 4974796 - 4974723
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  4974796 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 4974723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 42611815 - 42611888
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  42611815 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 42611888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 45637716 - 45637789
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  45637716 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 45637789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 15577911 - 15577841
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttaga 296  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| |||||    
T  15577911 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttaga 15577841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 15329277 - 15329350
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  15329277 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 15329350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 34482839 - 34482912
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  34482839 aatgctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatcacccttagattt 34482912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 48880988 - 48880915
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  48880988 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 48880915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 36790271 - 36790390
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    ||||||||||| ||||||| |||| |||||| || ||| |||||||||||||||| ||||||||||           || |||||||||||||| |||||    
T  36790271 ggaaaatgctaaatatcaataatggttttatcaacaaagattcaagaatgacatgacacaataatc-----------tctgtctcatttattaacctttc 36790359  T
Q  322 ataaaagaaagatacataacaccgaccaccc 352  Q
    |||||| ||| |||||||||||| |||||||    
T  36790360 ataaaacaaaaatacataacacccaccaccc 36790390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 15238414 - 15238459
Alignment:
Q  254 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  15238414 aagaaaaattcaagaatgacatggcagaataatcaccattagattt 15238459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 24394976 - 24395049
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||  ||||||||||||    
T  24394976 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataacaacctttagattt 24395049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 35444562 - 35444635
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||| ||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  35444562 aatgctatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 35444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 37477141 - 37477079
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatca 288  Q
    ||||||| |||||||||| |||||| | |||||||||| ||||||||||||||| ||||||||    
T  37477141 aatgctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatca 37477079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 40880641 - 40880706
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcac 289  Q
    |||||||||||||||||||||||||||| ||  |||| ||| || ||| ||||||||||||||||||    
T  40880641 ggaaaatgctagatatcaagaatgatttgat-tgaaagattaaaaaataacatggcacaataatcac 40880706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 3961983 - 3962056
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||||| ||| ||||    
T  3961983 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttaaattt 3962056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 18036990 - 18037055
Alignment:
Q  235 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||| |||||| | |||||||||| ||||||||||||||| |||||||||| ||| ||||    
T  18036990 atatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatcacccttaaattt 18037055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 25167911 - 25167838
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||| | ||||||||    
T  25167911 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcatccttagattt 25167838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 29737143 - 29737216
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||| | |||||||||| ||||||||    
T  29737143 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatcacccttagattt 29737216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 36790527 - 36790454
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| | |||||| |||||||||| ||||||||||||||| |||||| ||| ||| ||||    
T  36790527 aatgctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataattacccttaaattt 36790454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 4666 - 4537
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4666 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatttattaatctttca 4567  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| | |||||||||||||| |||||||    
T  4566 taaaaaacagatacataacacccaccaccc 4537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 4400 - 4473
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  4400 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 4473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 17175816 - 17175945
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17175816 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttca 17175915  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||||| |||||||    
T  17175916 taaaaaaaaaatacataacacccaccaccc 17175945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 32702475 - 32702346
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  32702475 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttca 32702376  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| |||||||||||| ||| |||||||    
T  32702375 taaaaaaaagatacataagacccaccaccc 32702346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 33696967 - 33696837
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33696967 ggaaaatgctagatatcaagaatgattttataagaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 33696868  T
Q  323 taaaagaaaga-tacataacaccgaccaccc 352  Q
    ||||| ||| | ||||||||||| |||||||    
T  33696867 taaaaaaaaaattacataacacccaccaccc 33696837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 18365369 - 18365489
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18365369 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttca 18365468  T
Q  323 taaaagaaagatacataacacc 344  Q
    ||||| ||| ||||||||||||    
T  18365469 taaaa-aaaaatacataacacc 18365489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 18370633 - 18370753
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18370633 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttca 18370732  T
Q  323 taaaagaaagatacataacacc 344  Q
    ||||| ||| ||||||||||||    
T  18370733 taaaa-aaaaatacataacacc 18370753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 33695121 - 33695251
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33695121 ggaaaatgctagatatcaagaatgattttataagaaatatttaagaatgatatgtcacaataatcacctttagatttcagtctcatttattaatctttca 33695220  T
Q  323 taaaagaaaga-tacataacaccgaccaccc 352  Q
    ||||| ||| | ||||||||||| |||||||    
T  33695221 taaaaaaaaaattacataacacccaccaccc 33695251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 2309218 - 2309339
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  2309218 ggaaaatgctagatatcaacgatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 2309317  T
Q  323 taaaagaaagatacataacacc 344  Q
    ||||| ||| ||||||||||||    
T  2309318 taaaaaaaaaatacataacacc 2309339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 28675418 - 28675289
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  28675418 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacctttca 28675319  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||  ||| ||||||||| || |||||||    
T  28675318 taaataaaaaatacataacccccaccaccc 28675289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 223 - 333
Target Start/End: Original strand, 23290876 - 23290986
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23290876 ggaaaatgctagatatcaaaaatgattttataagaaagattcaagaatgatatggcacaataattacctttagatttcagtctcatttattaatctttca 23290975  T
Q  323 taaaagaaaga 333  Q
    ||||| |||||    
T  23290976 taaaaaaaaga 23290986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 225 - 352
Target Start/End: Original strand, 6031537 - 6031665
Alignment:
Q  225 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat- 323  Q
    ||||| || |||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  6031537 aaaatactggatatcaagaatgattttataaaaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttttata 6031636  T
Q  324 aaaagaaagatacataacaccgaccaccc 352  Q
    |||| ||| |||||||||||| |||||||    
T  6031637 aaaaaaaaaatacataacacccaccaccc 6031665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 223 - 327
Target Start/End: Original strand, 17705264 - 17705367
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  17705264 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacc-ttagatttcagtctcatttattaacctttca 17705362  T
Q  323 taaaa 327  Q
    |||||    
T  17705363 taaaa 17705367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 261 - 352
Target Start/End: Original strand, 18889477 - 18889567
Alignment:
Q  261 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgaccaccc 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||    
T  18889477 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaa-aaaaatacataaaacccaccaccc 18889567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 11548386 - 11548505
Alignment:
Q  225 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat- 323  Q
    ||||||||||||||||||||||||||   |||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||   |||||||     
T  11548386 aaaatgctagatatcaagaatgatttatcaagaacgattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt--cctttcata 11548483  T
Q  324 -aaaagaaagatacataacacc 344  Q
     |||||||| ||||||||||||    
T  11548484 aaaaagaaaaatacataacacc 11548505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 264 - 352
Target Start/End: Complemental strand, 6127506 - 6127417
Alignment:
Q  264 caagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata-aaagaaagatacataacaccgaccaccc 352  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| |||||||||||| |||||||    
T  6127506 caagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttcatataaaaaaaaatacataacacccaccaccc 6127417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 29693716 - 29693611
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 321  Q
    ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| |||||| ||| |||||||||||||| ||||||||  |||||    
T  29693716 ggaaaatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatgacccttagatttcagtcttatttattatcctttc 29693617  T
Q  322 ataaaa 327  Q
    ||||||    
T  29693616 ataaaa 29693611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 33695388 - 33695315
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  33695388 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 33695315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 33696700 - 33696773
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  33696700 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 33696773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 34238883 - 34238948
Alignment:
Q  224 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcac 289  Q
    |||||||||||||||||||||||||||||| |  || |||||||||||||||| ||||||||||||    
T  34238883 gaaaatgctagatatcaagaatgattttatcaagaagattcaagaatgacatgacacaataatcac 34238948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 582522 - 582602
Alignment:
Q  223 ggaaaatgctagatatcaagaatgatttta-taagaaaaattcaagaatgacat-ggcacaataatcacctttagatttca 301  Q
    |||||||| ||||||||||||||||||||| ||||||||||| |||||||| || |||| |||||||||| ||||||||||    
T  582522 ggaaaatgttagatatcaagaatgattttattaagaaaaatttaagaatgatatgggcagaataatcaccattagatttca 582602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 25987126 - 25987071
Alignment:
Q  297 tttcagtctcatttattaatctttcataaaagaaagatacataacaccgaccaccc 352  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  25987126 tttcagtctcatttactaatctttcataaaaaaaagatacataacacccaccaccc 25987071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 6127279 - 6127352
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  6127279 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 6127352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 23291145 - 23291072
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  23291145 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 23291072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 11548647 - 11548576
Alignment:
Q  229 tgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||| ||||||||||  ||||| | |||||||||||||||||||||||||| |||||||||| ||||||||    
T  11548647 tgctatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 11548576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 25986934 - 25986997
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcac 289  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||    
T  25986934 aatgctatatatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatcac 25986997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 344
Target Start/End: Original strand, 9752109 - 9752161
Alignment:
Q  291 tttagatttcagtctcatttattaatctttcataaaagaaagatacataacacc 344  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||    
T  9752109 tttagatttcagtctcatttattaacctttcataaaa-aaaaatacataacacc 9752161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 17176082 - 17176009
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| || |||| ||||||||||||||| || |||||||||| ||||||||    
T  17176082 aatgctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatcacccttagattt 17176009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 17705526 - 17705453
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||||| ||||||||    
T  17705526 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttagattt 17705453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 18365634 - 18365561
Alignment:
Q  227 aatgctagatatcaagaatgattttataagaaaaatt-caagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| | ||||||| |||||||||||||||| |||||||||| ||| ||||    
T  18365634 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattt 18365561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 18370898 - 18370825
Alignment:
Q  227 aatgctagatatcaagaatgattttataagaaaaatt-caagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| | ||||||| |||||||||||||||| |||||||||| ||| ||||    
T  18370898 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattt 18370825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 28675152 - 28675225
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| |  |||||||||| ||||||||    
T  28675152 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatcacccttagattt 28675225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 268 - 352
Target Start/End: Original strand, 8515567 - 8515650
Alignment:
Q  268 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgaccaccc 352  Q
    |||||||||| | |||||||||  |||||||||||||| |||||||||  |||||||||| ||| |||||||||| | |||||||    
T  8515567 aatgacatggtagaataatcactcttagatttcagtcttatttattaacatttcataaaa-aaaaatacataacatccaccaccc 8515650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 18889757 - 18889685
Alignment:
Q  227 aatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||   ||||||| |||||||||||||||||| |||||| ||| ||||||||    
T  18889757 aatgctatatatcaagaaagatttatcaagaaaatttcaagaatgacatggcagaataataacccttagattt 18889685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 2121004 - 2121059
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatgg 277  Q
    |||||||| |||||||||| ||||||||||||| |||| |||||||||||||||||    
T  2121004 ggaaaatgttagatatcaaaaatgattttataaaaaaagattcaagaatgacatgg 2121059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 9752278 - 9752233
Alignment:
Q  254 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||||||||||||||| |||||| |||||||||| ||||||||    
T  9752278 aagaaaaattcaagaatgatatggcagaataatcacccttagattt 9752233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 8515786 - 8515723
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcac 289  Q
    ||||||| |||||||||| |||||||| |||| | ||| ||||||||||||||| |||||||||    
T  8515786 aatgctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatcac 8515723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 32702217 - 32702282
Alignment:
Q  235 atatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||||| |||||| | | ||||| ||||||||||| |||||| |||||||||| ||||||||    
T  32702217 atatcaagaaagattttttcatgaaaatttcaagaatgatatggcagaataatcacccttagattt 32702282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 106; Significance: 6e-53; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 11891 - 11762
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11891 ggaaaatgttagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 11792  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||||  |||||||    
T  11791 taaaaaaaaaatacataacactcaccaccc 11762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 11625 - 11698
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  11625 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 11698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 104; Significance: 9e-52; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 225 - 352
Target Start/End: Complemental strand, 13110 - 12983
Alignment:
Q  225 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 324  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  13110 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcata 13011  T
Q  325 aaagaaagatacataacaccgaccaccc 352  Q
    ||| |||||||||||||| | |||||||    
T  13010 aaaaaaagatacataacatccaccaccc 12983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 12846 - 12919
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||| | ||||||||    
T  12846 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattt 12919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 41280 - 41152
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41280 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgatatggtacaataatcacctttagatttcagtctcatttattaatctttca 41181  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| ||| |||||||||||| |||||||    
T  41180 taaaa-aaaaatacataacacccaccaccc 41152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 41015 - 41088
Alignment:
Q  227 aatgctagatatcaagaatgattttataagaaaaatt-caagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| | ||||||| |||||||||||||||| |||||||||| ||||||||    
T  41015 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 41088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 48119 - 47991
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 322  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  48119 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatagcacaataatcatctttagatttcagtctcatttattaatctttca 48020  T
Q  323 taaaagaaagatacataacaccgaccaccc 352  Q
    ||||| | | |||||||||||| |||||||    
T  48019 taaaa-ataaatacataacacccaccaccc 47991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 47854 - 47927
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    |||||||  ||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  47854 aatgctatttatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 47927  T

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Target: scaffold0665 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 356
Target Start/End: Complemental strand, 3252 - 3200
Alignment:
Q  304 ctcatttattaatctttcataaaagaaagatacataacaccgaccaccctatg 356  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||||||||    
T  3252 ctcatttattaatctttcataaaaaaaaaatacataacacccaccaccctatg 3200  T

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Target: scaffold0665; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 3072 - 3145
Alignment:
Q  227 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 299  Q
    ||||||| |||||||||| |||||||| || |||| || ||||||||||||||| |||||||||| ||||||||    
T  3072 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattt 3145  T

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Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 85642 - 85577
Alignment:
Q  223 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcac 289  Q
    |||||||||||||||||||||||||||| ||  |||| ||| || ||| ||||||||||||||||||    
T  85642 ggaaaatgctagatatcaagaatgatttgat-tgaaagattaaaaaataacatggcacaataatcac 85577  T

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