View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2125_low_59 (Length: 285)
Name: NF2125_low_59
Description: NF2125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2125_low_59 |
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Alignment Details
Target: chr3 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 41901228 - 41900960
Alignment:
| Q |
1 |
taacgttagagcttgtctagtacgtagaaaccctaatgtacgtaaatttaaaaaggtcatgattggagagaagctataggttaaaaaatttgtcctctag |
100 |
Q |
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| T |
41901228 |
taacgttagagcttgtctagtacgtagaaaccctaatgtacgtaaatttaaaaaggtcatgattggagagaagctataggttaaaaaatttgtcctctag |
41901129 |
T |
|
| Q |
101 |
gttttcatatccaatgtctaaactctacatacatcaattctctccatgcgatttggtcataaggaatgagaatttttcctttggtagatgagtccgaacc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41901128 |
gttttcatatccaatgtctaaactctacatacatcaattctctccatgcgatttggtcataaggaatgagaatttttcctttggtagatgagtccgaacc |
41901029 |
T |
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| Q |
201 |
ctactaatagatgactcgtttttcgagaatttattcaagatctatactagtgccgcggaattccaaatg |
269 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
41901028 |
ctactaatagatgactcgtttttcgagaatttattcaagatctatactagtgccgcggaaatccaaatg |
41900960 |
T |
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